AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203250


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203250 MtrunA17_Chr8g0373851 94.949 99 4 1 111 209 2 99 8.71e-62 187
Msa1203250 MtrunA17_Chr8g0373811 79.612 103 14 1 1 96 122 224 3.37e-45 157
Msa1203250 MtrunA17_Chr8g0373831 88.312 77 9 0 104 180 1 77 7.02e-45 144
Msa1203250 MtrunA17_Chr4g0070031 88.312 77 9 0 91 167 1624 1700 2.55e-42 152
Msa1203250 MtrunA17_Chr8g0387311 42.308 104 51 3 9 104 192 294 2.14e-17 80.1
Msa1203250 MtrunA17_Chr4g0030381 38.462 91 49 2 9 92 94 184 3.74e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1203250 AT3G50780.1 53.846 104 40 2 1 96 111 214 1.01e-28 112
Msa1203250 AT3G50780.2 53.846 104 40 2 1 96 111 214 1.01e-28 112
Msa1203250 AT1G63850.1 35.238 105 58 2 9 104 142 245 3.85e-15 73.9
Msa1203250 AT5G60050.1 39.394 99 54 2 9 101 100 198 2.98e-14 71.2
Msa1203250 AT2G03140.11 46.154 78 41 1 91 167 1310 1387 3.51e-14 71.2
Msa1203250 AT2G03140.3 46.154 78 41 1 91 167 1595 1672 3.56e-14 71.2
Msa1203250 AT2G03140.8 46.154 78 41 1 91 167 1595 1672 3.56e-14 71.2
Msa1203250 AT2G03140.10 46.154 78 41 1 91 167 1595 1672 3.56e-14 71.2
Msa1203250 AT2G03140.9 46.154 78 41 1 91 167 1595 1672 3.56e-14 71.2
Msa1203250 AT2G03140.5 46.154 78 41 1 91 167 1595 1672 3.56e-14 71.2
Msa1203250 AT2G03140.7 46.154 78 41 1 91 167 1595 1672 3.56e-14 71.2
Msa1203250 AT2G03140.1 46.154 78 41 1 91 167 1595 1672 3.56e-14 71.2
Msa1203250 AT2G03140.4 46.154 78 41 1 91 167 1595 1672 3.56e-14 71.2
Msa1203250 AT2G03140.2 46.154 78 41 1 91 167 1595 1672 3.58e-14 71.2
Msa1203250 AT2G03140.12 46.154 78 41 1 91 167 1595 1672 3.58e-14 71.2

Find 181 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGACAAAGTCGATGCTTTA+TGG 0.109191 8_1:-57304840 Msa1203250:three_prime_UTR
CACAGAACATTGAGTGAATT+TGG 0.124604 8_1:+57313400 None:intergenic
GCCTTCAGATAGAGCCTTTC+TGG 0.146763 8_1:+57305236 None:intergenic
TCCAAACCTCTTTCAAATTT+AGG 0.154205 8_1:+57305423 None:intergenic
GGCGAAACGCTCAAGCTTTC+CGG 0.154625 8_1:-57306101 Msa1203250:three_prime_UTR
CTTATCTTGGTCCAACTTAT+TGG 0.173244 8_1:+57305055 None:intergenic
CCTCATATTCCACCTTCTTT+AGG 0.196336 8_1:-57311631 Msa1203250:CDS
ATTCCTTGTGGTTGTCATTT+TGG 0.199979 8_1:-57305789 Msa1203250:three_prime_UTR
AGAATGTTTCTTGCATTCTT+TGG 0.222458 8_1:-57312522 Msa1203250:CDS
AACAGTTCAAACTATAGTTT+TGG 0.256425 8_1:-57313442 Msa1203250:five_prime_UTR
TCCACCTTCTTTAGGTGTTA+TGG 0.256584 8_1:-57311623 Msa1203250:CDS
GCTCACACCACACTATTTAA+TGG 0.258196 8_1:-57313324 Msa1203250:intron
CATGCTGTGAATGCATTTCT+TGG 0.260452 8_1:-57311673 Msa1203250:CDS
AGAAATAAATTTGTGGGAAT+TGG 0.269459 8_1:-57305196 Msa1203250:three_prime_UTR
CCAGCCTCATGCAGATAAAT+TGG 0.273277 8_1:-57305307 Msa1203250:three_prime_UTR
TTGAATGTGCAAAAGATTAA+AGG 0.273671 8_1:-57307813 Msa1203250:intron
TTGGAAATATAGAGGAATTA+TGG 0.274132 8_1:-57305770 Msa1203250:three_prime_UTR
GGCAAATAAGTTGCTTGAAA+TGG 0.279485 8_1:-57305343 Msa1203250:three_prime_UTR
CCTCTTTCAAATTTAGGATT+AGG 0.281407 8_1:+57305429 None:intergenic
TTCTTCGCAAAGAACATCTT+TGG 0.285228 8_1:-57306122 Msa1203250:three_prime_UTR
TGGTCCAACTTATTGGTTGC+AGG 0.299205 8_1:+57305062 None:intergenic
ACGCAAATATGTTCTTCATT+AGG 0.299340 8_1:+57306717 None:intergenic
CTTGACATTGTCGACCCTTT+TGG 0.303194 8_1:+57306610 None:intergenic
TTCTTTAGGTGTTATGGCTT+GGG 0.306309 8_1:-57311617 Msa1203250:CDS
TACAGATCGTGGCCTTGATT+AGG 0.317690 8_1:-57307888 Msa1203250:intron
ACAGATCGTGGCCTTGATTA+GGG 0.335823 8_1:-57307887 Msa1203250:intron
CTTCTTTAGGTGTTATGGCT+TGG 0.352808 8_1:-57311618 Msa1203250:CDS
AATTCATACCATATGAGATT+AGG 0.362065 8_1:-57305017 Msa1203250:three_prime_UTR
GACTCAATAACCACCTTTCT+CGG 0.365422 8_1:+57312760 None:intergenic
TCCTAAATTTGAAAGAGGTT+TGG 0.365758 8_1:-57305424 Msa1203250:three_prime_UTR
TTGGTTGTGCAAGTTTCTCT+TGG 0.369421 8_1:-57311654 Msa1203250:CDS
TGTACGAGATATTGAATTTG+AGG 0.372830 8_1:+57306371 None:intergenic
CCATCATCAAGCTGCTCATA+TGG 0.373746 8_1:-57305535 Msa1203250:three_prime_UTR
GCCTGTCCACTGATCATTAC+CGG 0.388651 8_1:+57306082 None:intergenic
GCAGTTGTACCTCCACAAAA+TGG 0.390067 8_1:+57306477 None:intergenic
ATTTCAACACTGCGAGGTTT+CGG 0.391207 8_1:-57313363 Msa1203250:five_prime_UTR
TCCAATGGTTGCCAAGTGTT+TGG 0.392168 8_1:+57305964 None:intergenic
GTTTATCATTGTTCTACTGC+TGG 0.394882 8_1:-57307865 Msa1203250:CDS
ATTCATACCATATGAGATTA+GGG 0.396653 8_1:-57305016 Msa1203250:three_prime_UTR
GCAAATAAGTTGCTTGAAAT+GGG 0.399729 8_1:-57305342 Msa1203250:three_prime_UTR
AAGAGACACTATGGGCAGTT+TGG 0.400556 8_1:-57305837 Msa1203250:three_prime_UTR
AGTCTTTGCAAATCAGGCTC+TGG 0.401375 8_1:+57306313 None:intergenic
TGATAGAACAGTGATTAGAT+TGG 0.407362 8_1:-57306804 Msa1203250:intron
ACAGAACATTGAGTGAATTT+GGG 0.410742 8_1:+57313401 None:intergenic
CGATCTAGCCAGCAGGCGCT+TGG 0.413605 8_1:-57305508 Msa1203250:three_prime_UTR
ACACCAAGTCTTTGCAAATC+AGG 0.417723 8_1:+57306307 None:intergenic
ACTTTCAAATCACCACCTTA+AGG 0.419729 8_1:-57305108 Msa1203250:three_prime_UTR
GGAAGAATCTCAATGCTTAG+AGG 0.420258 8_1:-57305286 Msa1203250:three_prime_UTR
AGTTATCGAAAGCTTAAATT+CGG 0.424504 8_1:+57305722 None:intergenic
CGACAGAGTGAAACTTATCT+TGG 0.426884 8_1:+57305042 None:intergenic
GGTCATGGAATCATAATTCC+AGG 0.426978 8_1:-57311507 Msa1203250:CDS
CCTAATCCTAAATTTGAAAG+AGG 0.427935 8_1:-57305429 Msa1203250:three_prime_UTR
GTTTGGAAGAAGCATCAAAT+AGG 0.428853 8_1:-57305407 Msa1203250:three_prime_UTR
AGACTTGGTGTTTGTACATC+CGG 0.429428 8_1:-57306295 Msa1203250:three_prime_UTR
ATCGAAAGCTTAAATTCGGC+AGG 0.430592 8_1:+57305726 None:intergenic
TTTCATGACTTTCCATCCAA+TGG 0.430775 8_1:+57305949 None:intergenic
CCAATTTATCTGCATGAGGC+TGG 0.431124 8_1:+57305307 None:intergenic
GCGACGACCCTAATCTCATA+TGG 0.440595 8_1:+57305009 None:intergenic
ACTCTTTGCCAAGCGCCTGC+TGG 0.443750 8_1:+57305500 None:intergenic
CTGCTGGAGTACAATCTGTA+AGG 0.444855 8_1:-57307849 Msa1203250:CDS
CCTAAAGAAGGTGGAATATG+AGG 0.451153 8_1:+57311631 None:intergenic
CAGTGACAGTTCATCTGTAA+TGG 0.451819 8_1:-57306652 Msa1203250:three_prime_UTR
GTTCGCGGAAGTTTAGTTGC+AGG 0.454226 8_1:-57305599 Msa1203250:three_prime_UTR
GTAAACATCTCCTAAGGCTT+AGG 0.457691 8_1:+57304867 None:intergenic
TAATTTCAAGAATAGAAATC+AGG 0.462085 8_1:-57305364 Msa1203250:three_prime_UTR
TTCTCCTAAAATGATTGAGC+AGG 0.465200 8_1:-57305667 Msa1203250:three_prime_UTR
ATTCAACTTGTGGGAAAAGC+AGG 0.468100 8_1:-57313101 Msa1203250:five_prime_UTR
TGTAAATCTTCCTAAGCCTT+AGG 0.468996 8_1:-57304877 Msa1203250:three_prime_UTR
TGATGATGGCGACCGAGATC+AGG 0.469915 8_1:+57305549 None:intergenic
GTCTTTGCAAATCAGGCTCT+GGG 0.470035 8_1:+57306314 None:intergenic
AGGTTTCGGAAGAGCTATAG+AGG 0.475120 8_1:-57313349 Msa1203250:five_prime_UTR
ACCAAACACTTGGCAACCAT+TGG 0.477256 8_1:-57305965 Msa1203250:three_prime_UTR
GACTCTTATAGAAAACCAAA+AGG 0.481717 8_1:-57306625 Msa1203250:three_prime_UTR
GAGATTAGGGTCGTCGCAAA+AGG 0.483690 8_1:-57305003 Msa1203250:three_prime_UTR
AATTTGTGGGAATTGGCATC+AGG 0.485324 8_1:-57305189 Msa1203250:three_prime_UTR
CGTGCCTGTAGTGGCGATGA+AGG 0.487453 8_1:+57312937 None:intergenic
CTATCCTTCATCGCCACTAC+AGG 0.487770 8_1:-57312941 Msa1203250:five_prime_UTR
GTGGGTCTGCTAATTGTTCA+AGG 0.488462 8_1:-57311577 Msa1203250:CDS
ATGTCTGTTACATTCAAACT+TGG 0.488523 8_1:-57313032 Msa1203250:five_prime_UTR
CCATATGAGCAGCTTGATGA+TGG 0.488631 8_1:+57305535 None:intergenic
GATGATCGACGCTGTAGTAT+TGG 0.489409 8_1:-57312853 Msa1203250:five_prime_UTR
TGAGAGTGCTGTTAAGTGTA+AGG 0.490329 8_1:-57306012 Msa1203250:three_prime_UTR
TTGGATGGAAAGTCATGAAA+AGG 0.491304 8_1:-57305946 Msa1203250:three_prime_UTR
AGTGAAGGAATCAAAACAAA+AGG 0.493161 8_1:+57305890 None:intergenic
AATGGCAAGTGCTATTTCAT+TGG 0.494850 8_1:-57311548 Msa1203250:CDS
CATGTTCAGAAGAGACACTA+TGG 0.495523 8_1:-57305846 Msa1203250:three_prime_UTR
GGTAAAACTATGTGGACTAG+TGG 0.500066 8_1:-57311596 Msa1203250:CDS
GGCAAGTGCTATTTCATTGG+TGG 0.500470 8_1:-57311545 Msa1203250:CDS
ACATCTGCACAAAGCTGAGA+TGG 0.500567 8_1:-57306400 Msa1203250:three_prime_UTR
GAGATATTGAATTTGAGGTC+TGG 0.501478 8_1:+57306376 None:intergenic
CTGTCAAGTTGAGTGTGCAT+AGG 0.504433 8_1:-57312702 Msa1203250:CDS
AAGCAGGTTCAGCGAAAGAA+AGG 0.506060 8_1:-57313085 Msa1203250:five_prime_UTR
AATTGAAATCATGCCGAGAA+AGG 0.506284 8_1:-57312773 Msa1203250:exon
TCACTCACTTGCACCGTGAC+CGG 0.506808 8_1:+57312889 None:intergenic
CAGTGCGTGAGAACCGCAAT+TGG 0.508352 8_1:-57306564 Msa1203250:three_prime_UTR
GTTTCGTTTATCTACCAGAA+AGG 0.508712 8_1:-57305250 Msa1203250:three_prime_UTR
AGATCCTGCAACCAATAAGT+TGG 0.512230 8_1:-57305066 Msa1203250:three_prime_UTR
GGTGGTTATTGAGTCTATGA+AGG 0.513474 8_1:-57312752 Msa1203250:CDS
TACCACAGTGATTCAACTTG+TGG 0.514301 8_1:-57313111 Msa1203250:intron
ACCACAGTGATTCAACTTGT+GGG 0.515055 8_1:-57313110 Msa1203250:intron
TATGCTCAGAGACTAAAATC+TGG 0.515386 8_1:-57305465 Msa1203250:three_prime_UTR
AGTGATGCCAAGTGAGTGAC+TGG 0.516747 8_1:+57305128 None:intergenic
AATTGTTCAAGGAACTGTAA+TGG 0.518269 8_1:-57311566 Msa1203250:CDS
GAGCCTGATTTGCAAAGACT+TGG 0.521361 8_1:-57306310 Msa1203250:three_prime_UTR
GCAGTGTTGAAATTGATTGA+AGG 0.522672 8_1:+57313373 None:intergenic
TTCAAATTTAGGATTAGGAC+GGG 0.522702 8_1:+57305434 None:intergenic
ATTAGCTTTAGCCCTTCTCC+TGG 0.523241 8_1:+57305383 None:intergenic
TCCGGTAATGATCAGTGGAC+AGG 0.523358 8_1:-57306083 Msa1203250:three_prime_UTR
TGGAGCGCGATCTAGCCAGC+AGG 0.523628 8_1:-57305515 Msa1203250:three_prime_UTR
AGCAGGCGCTTGGCAAAGAG+TGG 0.523735 8_1:-57305498 Msa1203250:three_prime_UTR
ACAAATCAAGGAGCAGCTTA+CGG 0.524363 8_1:-57306741 Msa1203250:three_prime_UTR
CAATATCTCGTACATTAAAG+AGG 0.524991 8_1:-57306362 Msa1203250:three_prime_UTR
TGCAGTGAGAAATAAATTTG+TGG 0.525201 8_1:-57305203 Msa1203250:three_prime_UTR
TTGCATTCTTTGGATTCTCA+AGG 0.525461 8_1:-57312512 Msa1203250:intron
CTGAGAATCGAAGTGGTTCG+CGG 0.530378 8_1:-57305614 Msa1203250:three_prime_UTR
TGGAATCATAATTCCAGGGC+TGG 0.530738 8_1:-57311502 Msa1203250:CDS
GTGTATATTGTTACCAATTG+CGG 0.530995 8_1:+57306551 None:intergenic
TGTACATCCGGAAAGTCCAT+TGG 0.533385 8_1:-57306283 Msa1203250:three_prime_UTR
CATCAAATAGGACCAGGAGA+AGG 0.534319 8_1:-57305395 Msa1203250:three_prime_UTR
TGGAAAGATTTCGGAACAGT+CGG 0.535969 8_1:-57312647 Msa1203250:CDS
TTTGATTTACTACCTGATCT+CGG 0.536142 8_1:-57305561 Msa1203250:three_prime_UTR
AACACTTGGCAACCATTGGA+TGG 0.536290 8_1:-57305961 Msa1203250:three_prime_UTR
GAAATATATGTTGAAGCTGT+TGG 0.541026 8_1:-57312586 Msa1203250:CDS
TGTCAAGTTGAGTGTGCATA+GGG 0.542545 8_1:-57312701 Msa1203250:CDS
GCTGTAGTATTGGTTCAGAA+TGG 0.542704 8_1:-57312843 Msa1203250:five_prime_UTR
GCAGTGAGAAATAAATTTGT+GGG 0.543229 8_1:-57305202 Msa1203250:three_prime_UTR
TTTCAAATTTAGGATTAGGA+CGG 0.543514 8_1:+57305433 None:intergenic
ACAATGATAAACCCTAATCA+AGG 0.545246 8_1:+57307876 None:intergenic
ATCAAATAGGACCAGGAGAA+GGG 0.546017 8_1:-57305394 Msa1203250:three_prime_UTR
TTTATCTGCATGAGGCTGGA+TGG 0.546716 8_1:+57305311 None:intergenic
CAGTGTTGAAATTGATTGAA+GGG 0.546861 8_1:+57313374 None:intergenic
ATTGCCTAGACTTGATTATG+AGG 0.552616 8_1:-57304817 Msa1203250:three_prime_UTR
AGGGTCGTCGCAAAAGGCTA+TGG 0.554021 8_1:-57304997 Msa1203250:three_prime_UTR
AAGACCTCATAATCAAGTCT+AGG 0.556048 8_1:+57304813 None:intergenic
AACTTTACCATTAAATAGTG+TGG 0.559895 8_1:+57313317 None:intergenic
TCTTCCAATTTATCTGCATG+AGG 0.563398 8_1:+57305303 None:intergenic
AAGAAAGAAAATGCCAGCCC+TGG 0.565363 8_1:+57311489 None:intergenic
GATTGCTCTGAGACAAATCA+AGG 0.567116 8_1:-57306753 Msa1203250:three_prime_UTR
GACAGTTCATCTGTAATGGA+AGG 0.570153 8_1:-57306648 Msa1203250:three_prime_UTR
ACAAAACCCAGTCACTCACT+TGG 0.578259 8_1:-57305135 Msa1203250:three_prime_UTR
CAAGAAATGCATTCACAGCA+TGG 0.578896 8_1:+57311674 None:intergenic
ACCAGAAAGGCTCTATCTGA+AGG 0.579442 8_1:-57305237 Msa1203250:three_prime_UTR
CATCTGCACAAAGCTGAGAT+GGG 0.579947 8_1:-57306399 Msa1203250:three_prime_UTR
ACTCTTATAGAAAACCAAAA+GGG 0.580021 8_1:-57306624 Msa1203250:three_prime_UTR
TGGACAGGCTCTCCTAGCTA+TGG 0.583120 8_1:-57306068 Msa1203250:three_prime_UTR
TTATGATCATTACCATAGCT+AGG 0.583706 8_1:+57306056 None:intergenic
ACATAGGTAAACATCTCCTA+AGG 0.583732 8_1:+57304861 None:intergenic
GATGAGTTCATTTGTGCAAG+AGG 0.586696 8_1:-57305167 Msa1203250:three_prime_UTR
TGTGGAGGTACAACTGCTGC+TGG 0.586893 8_1:-57306471 Msa1203250:three_prime_UTR
TGGCGATGAAGGATAGCTAT+CGG 0.590549 8_1:+57312948 None:intergenic
TGAAATCATGCCGAGAAAGG+TGG 0.592138 8_1:-57312770 Msa1203250:exon
AAGCATCGACTTTGTCACAT+AGG 0.596748 8_1:+57304845 None:intergenic
TCTCCTAAAATGATTGAGCA+GGG 0.608885 8_1:-57305666 Msa1203250:three_prime_UTR
GAAGCACAGTGGTTGTTCAG+AGG 0.608970 8_1:-57305924 Msa1203250:three_prime_UTR
GCCATAACACCTAAAGAAGG+TGG 0.609442 8_1:+57311622 None:intergenic
GTAAAACTATGTGGACTAGT+GGG 0.611084 8_1:-57311595 Msa1203250:CDS
GATGTTCTGATAGAGAAGAG+TGG 0.611901 8_1:-57312679 Msa1203250:CDS
GATAATTCTGAGAATCGAAG+TGG 0.614192 8_1:-57305621 Msa1203250:three_prime_UTR
AGCTTTCCGGTAATGATCAG+TGG 0.616263 8_1:-57306088 Msa1203250:three_prime_UTR
CATATATCGAAGACAAGGGA+AGG 0.617551 8_1:-57306587 Msa1203250:three_prime_UTR
TCTTCAAATCAGTGATTGCG+AGG 0.623422 8_1:-57312614 Msa1203250:CDS
TGCTGGAGTACAATCTGTAA+GGG 0.623676 8_1:-57307848 Msa1203250:CDS
GAGCAACTAACATTGTCTAC+CGG 0.626990 8_1:-57305696 Msa1203250:three_prime_UTR
TGATCTACTACACATATCAC+AGG 0.627421 8_1:+57304936 None:intergenic
CAAGCCATAACACCTAAAGA+AGG 0.628364 8_1:+57311619 None:intergenic
TCAAGCATATATCGAAGACA+AGG 0.630094 8_1:-57306592 Msa1203250:three_prime_UTR
ACAGTTCATCTGTAATGGAA+GGG 0.632090 8_1:-57306647 Msa1203250:three_prime_UTR
AAGAAGCATCAAATAGGACC+AGG 0.634670 8_1:-57305401 Msa1203250:three_prime_UTR
GTCATGGAATCATAATTCCA+GGG 0.638923 8_1:-57311506 Msa1203250:CDS
ATGGCTTGGGTAAAACTATG+TGG 0.646478 8_1:-57311604 Msa1203250:CDS
CAATCAATTTCAACACTGCG+AGG 0.647423 8_1:-57313369 Msa1203250:five_prime_UTR
ATGTTCAGAAGAGACACTAT+GGG 0.654163 8_1:-57305845 Msa1203250:three_prime_UTR
TCGAAAGCTTAAATTCGGCA+GGG 0.657128 8_1:+57305727 None:intergenic
TTAGATTGGAGCAGTCAGCA+TGG 0.666247 8_1:-57306790 Msa1203250:three_prime_UTR
AAAGCTGAACAAAATTGCAG+TGG 0.668916 8_1:-57306339 Msa1203250:three_prime_UTR
GTGCAAGTGAGTGAAAGAAG+AGG 0.679011 8_1:-57312880 Msa1203250:five_prime_UTR
CAAGCATATATCGAAGACAA+GGG 0.692685 8_1:-57306591 Msa1203250:three_prime_UTR
TTTCCAAAATGACAACCACA+AGG 0.715599 8_1:+57305786 None:intergenic
ATTGCAAAGAAATGAAACTG+CGG 0.754084 8_1:-57312555 Msa1203250:CDS
GTCATGAAAAGGAAGCACAG+TGG 0.767507 8_1:-57305935 Msa1203250:three_prime_UTR
GTGATGCCAAGTGAGTGACT+GGG 0.781211 8_1:+57305129 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTTTTTTTTTTTTAG+AGG + chr8_1:57304859-57304878 None:intergenic 10.0%
!! AATAATATAATATGAGAAAA+TGG - chr8_1:57309185-57309204 Msa1203250:intron 10.0%
!! AAAAAAAAAAAACTTGAAAT+AGG - chr8_1:57309616-57309635 Msa1203250:intron 10.0%
!! AATTAGAAAAATATCAAATT+GGG + chr8_1:57310376-57310395 None:intergenic 10.0%
!! TAATTAGAAAAATATCAAAT+TGG + chr8_1:57310377-57310396 None:intergenic 10.0%
!! TTATATACATATAACATATA+AGG - chr8_1:57310594-57310613 Msa1203250:intron 10.0%
!! TTTATATTATTTCCACAAAA+GGG + chr8_1:57305158-57305177 None:intergenic 15.0%
!!! TTTTATATTATTTCCACAAA+AGG + chr8_1:57305159-57305178 None:intergenic 15.0%
!!! TGTCATTAATTTTAATGATT+TGG - chr8_1:57305845-57305864 Msa1203250:three_prime_UTR 15.0%
!!! ATTTATAGATGCATATTTTT+TGG - chr8_1:57306090-57306109 Msa1203250:three_prime_UTR 15.0%
!!! TTTATAGATGCATATTTTTT+GGG - chr8_1:57306091-57306110 Msa1203250:three_prime_UTR 15.0%
!! GTAAATATCATTTATATAGA+TGG - chr8_1:57306186-57306205 Msa1203250:intron 15.0%
!! TTCAAAAATATATACATAAC+TGG - chr8_1:57306296-57306315 Msa1203250:three_prime_UTR 15.0%
!!! GATATTTTAACAAGATTTTT+TGG + chr8_1:57306969-57306988 None:intergenic 15.0%
!!! ATCACATGTTTTTTTTTTAA+AGG - chr8_1:57307346-57307365 Msa1203250:intron 15.0%
!! TAGAGTTTCAAATTTAAATT+TGG - chr8_1:57308201-57308220 Msa1203250:intron 15.0%
!! CAAAAATAAATAGTTTATTC+AGG + chr8_1:57308849-57308868 None:intergenic 15.0%
!!! CTGAATAAACTATTTATTTT+TGG - chr8_1:57308847-57308866 Msa1203250:intron 15.0%
!! TTAAGATAATAATATATAGC+CGG + chr8_1:57309239-57309258 None:intergenic 15.0%
!! TCAAAGACAAAAAAAAAAAA+TGG + chr8_1:57309285-57309304 None:intergenic 15.0%
!!! TATTTATTTTTTCAATCCTA+GGG + chr8_1:57309890-57309909 None:intergenic 15.0%
!!! TTATTTATTTTTTCAATCCT+AGG + chr8_1:57309891-57309910 None:intergenic 15.0%
!!! TTTTTTTTTTTCTTCTATCA+TGG - chr8_1:57311482-57311501 Msa1203250:intron 15.0%
!! ATTTCTTAAGTAAAAAAGAA+AGG - chr8_1:57311800-57311819 Msa1203250:intron 15.0%
!! AATTAGTATTAAGAAAAAGC+CGG - chr8_1:57305410-57305429 Msa1203250:three_prime_UTR 20.0%
!!! TTTTTTTTCTGGAAAGATTT+CGG - chr8_1:57305662-57305681 Msa1203250:three_prime_UTR 20.0%
!!! AACTACATATTCATTTGTTA+TGG - chr8_1:57305902-57305921 Msa1203250:three_prime_UTR 20.0%
!! GAAACATTATGATTATGAAA+TGG - chr8_1:57306001-57306020 Msa1203250:three_prime_UTR 20.0%
!! TCATGTAACAAAAATAATCA+AGG + chr8_1:57306120-57306139 None:intergenic 20.0%
!! ATGATCATGTAACAAAATTT+GGG + chr8_1:57306401-57306420 None:intergenic 20.0%
!!! CAGTTAATTGAATTTTTGAA+AGG - chr8_1:57306588-57306607 Msa1203250:three_prime_UTR 20.0%
!! AGTAGATACATAAATAACAT+AGG + chr8_1:57306890-57306909 None:intergenic 20.0%
!!! TTCAAATTTTGCATAAAATG+TGG - chr8_1:57308225-57308244 Msa1203250:intron 20.0%
!! AAAAATCAAAGATAAGAGAA+TGG - chr8_1:57308495-57308514 Msa1203250:intron 20.0%
!! TGAAAGATATAATTCATACA+GGG + chr8_1:57308922-57308941 None:intergenic 20.0%
!! TTGAAAGATATAATTCATAC+AGG + chr8_1:57308923-57308942 None:intergenic 20.0%
!! AAAAAAAAAATGGTCCAATA+AGG + chr8_1:57309275-57309294 None:intergenic 20.0%
!!! ATTTATTTTTTCAATCCTAG+GGG + chr8_1:57309889-57309908 None:intergenic 20.0%
!!! TTTTTTGGAATAATAACCTA+GGG + chr8_1:57309940-57309959 None:intergenic 20.0%
!!! TTTTTTTGGAATAATAACCT+AGG + chr8_1:57309941-57309960 None:intergenic 20.0%
!! ATATATACAACAATTACCTA+GGG + chr8_1:57309964-57309983 None:intergenic 20.0%
!! TATATATACAACAATTACCT+AGG + chr8_1:57309965-57309984 None:intergenic 20.0%
!!! AAAATTTAAATGAAAAGTGC+TGG + chr8_1:57310018-57310037 None:intergenic 20.0%
!! ACCTTCAAAAAAAATAATGA+GGG + chr8_1:57310130-57310149 None:intergenic 20.0%
!! TACCTTCAAAAAAAATAATG+AGG + chr8_1:57310131-57310150 None:intergenic 20.0%
!!! GACTATAAGATCATTTTATA+AGG + chr8_1:57310259-57310278 None:intergenic 20.0%
!! AATTAAATCAAATCATCCTT+AGG + chr8_1:57310570-57310589 None:intergenic 20.0%
!!! AAGGATGATTAGTTTTTTTT+TGG - chr8_1:57310613-57310632 Msa1203250:intron 20.0%
!!! AGGATGATTAGTTTTTTTTT+GGG - chr8_1:57310614-57310633 Msa1203250:intron 20.0%
!! CAATCTTTGATTATTAGATT+TGG + chr8_1:57310670-57310689 None:intergenic 20.0%
!!! GTTTAAAGTATTTAATATCC+CGG + chr8_1:57310850-57310869 None:intergenic 20.0%
!! TTCTTACAAAAAGATAATCT+GGG + chr8_1:57311898-57311917 None:intergenic 20.0%
!! TTTCTTACAAAAAGATAATC+TGG + chr8_1:57311899-57311918 None:intergenic 20.0%
!! TAATTTCAAGAATAGAAATC+AGG - chr8_1:57312954-57312973 Msa1203250:five_prime_UTR 20.0%
! GTCCTTCTTTCAATAAAAAA+AGG - chr8_1:57304813-57304832 Msa1203250:three_prime_UTR 25.0%
!!! GACCTTTTTTTATTGAAAGA+AGG + chr8_1:57304818-57304837 None:intergenic 25.0%
!! AACAGTTCAAACTATAGTTT+TGG - chr8_1:57304876-57304895 Msa1203250:three_prime_UTR 25.0%
!! ACAGTTCAAACTATAGTTTT+GGG - chr8_1:57304877-57304896 Msa1203250:three_prime_UTR 25.0%
! AACTTTACCATTAAATAGTG+TGG + chr8_1:57305004-57305023 None:intergenic 25.0%
! TCTCATCTATAGTTAACTAA+AGG - chr8_1:57305048-57305067 Msa1203250:three_prime_UTR 25.0%
! CTCATCTATAGTTAACTAAA+GGG - chr8_1:57305049-57305068 Msa1203250:three_prime_UTR 25.0%
!!! TTCTGGTTTTTCAACATATA+TGG - chr8_1:57305324-57305343 Msa1203250:three_prime_UTR 25.0%
!!! TCTGGTTTTTCAACATATAT+GGG - chr8_1:57305325-57305344 Msa1203250:three_prime_UTR 25.0%
!!! TCTATGAAGGTTGTTTTATT+AGG - chr8_1:57305579-57305598 Msa1203250:three_prime_UTR 25.0%
!!! CTATGAAGGTTGTTTTATTA+GGG - chr8_1:57305580-57305599 Msa1203250:three_prime_UTR 25.0%
! TGATCATGTAACAAAATTTG+GGG + chr8_1:57306400-57306419 None:intergenic 25.0%
! CATGATCATGTAACAAAATT+TGG + chr8_1:57306402-57306421 None:intergenic 25.0%
!!! ATTTGTTTTGAAAAACATGC+TGG - chr8_1:57306508-57306527 Msa1203250:three_prime_UTR 25.0%
! AAATTCAATTAACTGCAACA+AGG + chr8_1:57306583-57306602 None:intergenic 25.0%
!!! AATTGAATTTTTGAAAGGCT+TGG - chr8_1:57306593-57306612 Msa1203250:three_prime_UTR 25.0%
! GCAATTAATTGTCTTGTAAA+AGG + chr8_1:57306927-57306946 None:intergenic 25.0%
!!! CTTTTCTCTCAATTTTTCAA+CGG + chr8_1:57307049-57307068 None:intergenic 25.0%
! ATTGAGATGAGATATATACA+AGG - chr8_1:57307090-57307109 Msa1203250:intron 25.0%
! TTGAGATGAGATATATACAA+GGG - chr8_1:57307091-57307110 Msa1203250:intron 25.0%
! TGAGTATCATGATATAATCA+TGG - chr8_1:57307322-57307341 Msa1203250:intron 25.0%
! GGTTTAATCAGGAATATAAT+GGG + chr8_1:57307817-57307836 None:intergenic 25.0%
!!! TTTGTTTGCTACTTTAGATT+TGG + chr8_1:57308383-57308402 None:intergenic 25.0%
!! AATCTAAAGTAGCAAACAAA+AGG - chr8_1:57308383-57308402 Msa1203250:intron 25.0%
!!! TTGATTTTTGATTATGCTTG+TGG + chr8_1:57308484-57308503 None:intergenic 25.0%
! TGAACTGAGTAAACAAATAT+TGG + chr8_1:57308534-57308553 None:intergenic 25.0%
! TTGAAAAATGGGTAGAAATT+AGG + chr8_1:57308665-57308684 None:intergenic 25.0%
! AAAGAAATTGACAAGAAAGT+TGG + chr8_1:57308790-57308809 None:intergenic 25.0%
! ACTCAAAAAATTGTCCTTAT+TGG - chr8_1:57309258-57309277 Msa1203250:intron 25.0%
! ACATAAAAACTAATGAAGGT+TGG - chr8_1:57309406-57309425 Msa1203250:intron 25.0%
! AATGTGAGAACATCTTTAAT+GGG - chr8_1:57309485-57309504 Msa1203250:intron 25.0%
! ACAGAATACACAATTACTAT+TGG + chr8_1:57309680-57309699 None:intergenic 25.0%
! CATTAATGTATAGTGTAATG+GGG + chr8_1:57309710-57309729 None:intergenic 25.0%
! CCATTAATGTATAGTGTAAT+GGG + chr8_1:57309711-57309730 None:intergenic 25.0%
! ACCATTAATGTATAGTGTAA+TGG + chr8_1:57309712-57309731 None:intergenic 25.0%
! GTTATCTTTCAAAAGTTGAA+TGG + chr8_1:57309802-57309821 None:intergenic 25.0%
! TATTATTCCAAAAAAACCCT+AGG - chr8_1:57309945-57309964 Msa1203250:intron 25.0%
! CTTCAAAAAAAATAATGAGG+GGG + chr8_1:57310128-57310147 None:intergenic 25.0%
! CCTTCAAAAAAAATAATGAG+GGG + chr8_1:57310129-57310148 None:intergenic 25.0%
! AGAATATATGTAACATGAAG+GGG + chr8_1:57310175-57310194 None:intergenic 25.0%
! GAGAATATATGTAACATGAA+GGG + chr8_1:57310176-57310195 None:intergenic 25.0%
! AGAGAATATATGTAACATGA+AGG + chr8_1:57310177-57310196 None:intergenic 25.0%
! AAAGATCTAATCAAGATTCA+AGG + chr8_1:57310401-57310420 None:intergenic 25.0%
! TTGAATGTGCAAAAGATTAA+AGG - chr8_1:57310505-57310524 Msa1203250:intron 25.0%
!!! TAAAGGTTGAATCTTTTTCA+TGG - chr8_1:57310522-57310541 Msa1203250:intron 25.0%
! TTATGATCATTTGATTCCTA+AGG - chr8_1:57310551-57310570 Msa1203250:intron 25.0%
! AAAGTACAGATGATTAGATT+TGG - chr8_1:57310710-57310729 Msa1203250:intron 25.0%
!! AGATGATTAGATTTGGATTT+TGG - chr8_1:57310717-57310736 Msa1203250:intron 25.0%
!! TATTTGATGACTAAAACACT+GGG + chr8_1:57310763-57310782 None:intergenic 25.0%
!! TTATTTGATGACTAAAACAC+TGG + chr8_1:57310764-57310783 None:intergenic 25.0%
!!! CATATTATCTTTTTTGCATG+AGG - chr8_1:57310949-57310968 Msa1203250:intron 25.0%
! CGTAACGAAATCTAAAAAAA+TGG - chr8_1:57311132-57311151 Msa1203250:intron 25.0%
! ACTCTTATAGAAAACCAAAA+GGG - chr8_1:57311694-57311713 Msa1203250:CDS 25.0%
!!! CAATAGTTTTTTGTTAGTGA+AGG + chr8_1:57312446-57312465 None:intergenic 25.0%
! CTTCACTAACAAAAAACTAT+TGG - chr8_1:57312444-57312463 Msa1203250:intron 25.0%
!!! TTGTCATTTTGGAAATATAG+AGG - chr8_1:57312540-57312559 Msa1203250:CDS 25.0%
! TTGGAAATATAGAGGAATTA+TGG - chr8_1:57312548-57312567 Msa1203250:CDS 25.0%
! AGTTATCGAAAGCTTAAATT+CGG + chr8_1:57312599-57312618 None:intergenic 25.0%
!! TTTCAAATTTAGGATTAGGA+CGG + chr8_1:57312888-57312907 None:intergenic 25.0%
! AGAAATAAATTTGTGGGAAT+TGG - chr8_1:57313122-57313141 Msa1203250:intron 25.0%
!! TATTTGCAGATTTTTCCTTA+AGG + chr8_1:57313228-57313247 None:intergenic 25.0%
! AATTCATACCATATGAGATT+AGG - chr8_1:57313301-57313320 Msa1203250:intron 25.0%
! ATTCATACCATATGAGATTA+GGG - chr8_1:57313302-57313321 Msa1203250:intron 25.0%
ACAGAACATTGAGTGAATTT+GGG + chr8_1:57304920-57304939 None:intergenic 30.0%
! CAGTGTTGAAATTGATTGAA+GGG + chr8_1:57304947-57304966 None:intergenic 30.0%
ATGTCTGTTACATTCAAACT+TGG - chr8_1:57305286-57305305 Msa1203250:three_prime_UTR 30.0%
!! GTTGTTTTATTAGGGAAAGA+AGG - chr8_1:57305588-57305607 Msa1203250:three_prime_UTR 30.0%
GAAATATATGTTGAAGCTGT+TGG - chr8_1:57305732-57305751 Msa1203250:three_prime_UTR 30.0%
ATTGCAAAGAAATGAAACTG+CGG - chr8_1:57305763-57305782 Msa1203250:three_prime_UTR 30.0%
AGAATGTTTCTTGCATTCTT+TGG - chr8_1:57305796-57305815 Msa1203250:three_prime_UTR 30.0%
AATGAATATGTAGTTGCTAG+TGG + chr8_1:57305897-57305916 None:intergenic 30.0%
! GCATATACAAGTTTGAGTTA+AGG - chr8_1:57305926-57305945 Msa1203250:three_prime_UTR 30.0%
TTCTGCAGTGAAATAAAAAC+TGG - chr8_1:57306028-57306047 Msa1203250:three_prime_UTR 30.0%
!!! ATAGATGCATATTTTTTGGG+AGG - chr8_1:57306094-57306113 Msa1203250:three_prime_UTR 30.0%
GTATGCAACTCTTTATAGAA+TGG + chr8_1:57306150-57306169 None:intergenic 30.0%
!! CATTGTCTTTTGTTTGATAG+TGG - chr8_1:57306437-57306456 Msa1203250:three_prime_UTR 30.0%
! AAAAAAGTGTGTTGTCAAGT+TGG - chr8_1:57306461-57306480 Msa1203250:three_prime_UTR 30.0%
AATTGTTCAAGGAACTGTAA+TGG - chr8_1:57306752-57306771 Msa1203250:three_prime_UTR 30.0%
CAAAAAGAAAGAAAGACAGA+CGG + chr8_1:57307006-57307025 None:intergenic 30.0%
!! AAAAGAAGTGTTTGAAAGAG+TGG - chr8_1:57307064-57307083 Msa1203250:intron 30.0%
!! AAAGAAGTGTTTGAAAGAGT+GGG - chr8_1:57307065-57307084 Msa1203250:intron 30.0%
!! ACATTTATAAGCGCTTTTTG+CGG - chr8_1:57307222-57307241 Msa1203250:intron 30.0%
! AATACATGGAACACTAGTTT+GGG + chr8_1:57307292-57307311 None:intergenic 30.0%
GAAAACGAACTAAGAAGAAT+CGG + chr8_1:57307428-57307447 None:intergenic 30.0%
GAGGTATAGATTAGAAAATC+TGG + chr8_1:57307450-57307469 None:intergenic 30.0%
TCTATACCTCAGAAATTGAT+TGG - chr8_1:57307460-57307479 Msa1203250:intron 30.0%
! CAGATGATGTGTTGTTAAAT+TGG + chr8_1:57307693-57307712 None:intergenic 30.0%
GGGTTTAATCAGGAATATAA+TGG + chr8_1:57307818-57307837 None:intergenic 30.0%
ACATAAATCTTACCGATCAA+AGG - chr8_1:57307981-57308000 Msa1203250:intron 30.0%
AATCAGAATCATCCTTTGAT+CGG + chr8_1:57307996-57308015 None:intergenic 30.0%
! ATTGAGAATTGACACTTTTG+TGG - chr8_1:57308082-57308101 Msa1203250:intron 30.0%
CAGTAATGAAAATCAGTGTT+TGG + chr8_1:57308135-57308154 None:intergenic 30.0%
!! TTCATTACTGATTCAGTTGA+AGG - chr8_1:57308145-57308164 Msa1203250:intron 30.0%
TGATTTCTATCAGTGAGAAT+AGG + chr8_1:57308266-57308285 None:intergenic 30.0%
CAATAATAAACGTAGATGTG+TGG - chr8_1:57308339-57308358 Msa1203250:intron 30.0%
! TTTTGCTTTGCTTAGTTACT+AGG + chr8_1:57308461-57308480 None:intergenic 30.0%
AATCAAAGATAAGAGAATGG+AGG - chr8_1:57308498-57308517 Msa1203250:intron 30.0%
ATCAAAGATAAGAGAATGGA+GGG - chr8_1:57308499-57308518 Msa1203250:intron 30.0%
TTGTATCACTCATTTCATAG+TGG + chr8_1:57308598-57308617 None:intergenic 30.0%
ATGAAATGAGTGATACAAAG+AGG - chr8_1:57308600-57308619 Msa1203250:intron 30.0%
! AATTAGGTATTGTGCTTTGA+GGG + chr8_1:57308649-57308668 None:intergenic 30.0%
! AAATTAGGTATTGTGCTTTG+AGG + chr8_1:57308650-57308669 None:intergenic 30.0%
GTTTGAGTGACTTGAAAAAT+GGG + chr8_1:57308676-57308695 None:intergenic 30.0%
TTAACCACTATACTCATGAT+GGG - chr8_1:57308823-57308842 Msa1203250:intron 30.0%
! GCTACATCACAAAATTTTAG+GGG + chr8_1:57308874-57308893 None:intergenic 30.0%
! GGCTACATCACAAAATTTTA+GGG + chr8_1:57308875-57308894 None:intergenic 30.0%
! TGGCTACATCACAAAATTTT+AGG + chr8_1:57308876-57308895 None:intergenic 30.0%
AGATATAATTCATACAGGGT+TGG + chr8_1:57308918-57308937 None:intergenic 30.0%
!! ATTCAGGTTTTTGCTTCATT+TGG - chr8_1:57309073-57309092 Msa1203250:intron 30.0%
TTTACAGAAGTGATGTAGAA+TGG + chr8_1:57309151-57309170 None:intergenic 30.0%
TGGCAGTTTATCATTAAATG+CGG - chr8_1:57309205-57309224 Msa1203250:intron 30.0%
TCTTTGACCAATTTGAAAAC+CGG - chr8_1:57309298-57309317 Msa1203250:intron 30.0%
TGGCACATAAAAACTAATGA+AGG - chr8_1:57309402-57309421 Msa1203250:intron 30.0%
CATTAAAGATGTTCTCACAT+TGG + chr8_1:57309486-57309505 None:intergenic 30.0%
CAATGTGAGAACATCTTTAA+TGG - chr8_1:57309484-57309503 Msa1203250:intron 30.0%
CCCATTACACTATACATTAA+TGG - chr8_1:57309708-57309727 Msa1203250:intron 30.0%
TATACATTAATGGTATGACG+TGG - chr8_1:57309718-57309737 Msa1203250:intron 30.0%
!!! GTTTGTTTTGGAAAGTTGAA+TGG + chr8_1:57309864-57309883 None:intergenic 30.0%
TTTAGTCAAAAAGAAACCCT+AGG - chr8_1:57309921-57309940 Msa1203250:intron 30.0%
!!! ACAATTACCTAGGGTTTTTT+TGG + chr8_1:57309955-57309974 None:intergenic 30.0%
TATGCAGAGAGAAATGAATT+GGG + chr8_1:57310099-57310118 None:intergenic 30.0%
TTATGCAGAGAGAAATGAAT+TGG + chr8_1:57310100-57310119 None:intergenic 30.0%
!!! CCCCTCATTATTTTTTTTGA+AGG - chr8_1:57310126-57310145 Msa1203250:intron 30.0%
! TTGTTCAATTTTACAGATCG+TGG - chr8_1:57310419-57310438 Msa1203250:intron 30.0%
ACAATGATAAACCCTAATCA+AGG + chr8_1:57310445-57310464 None:intergenic 30.0%
TTGCAATGTTGTTAACTGAA+TGG + chr8_1:57311168-57311187 None:intergenic 30.0%
ATAGTACCTCATACTTCATA+GGG + chr8_1:57311322-57311341 None:intergenic 30.0%
ACACAAATGACATAAAGCTT+TGG + chr8_1:57311407-57311426 None:intergenic 30.0%
TGATAGAACAGTGATTAGAT+TGG - chr8_1:57311514-57311533 Msa1203250:CDS 30.0%
ACGCAAATATGTTCTTCATT+AGG + chr8_1:57311604-57311623 None:intergenic 30.0%
GACTCTTATAGAAAACCAAA+AGG - chr8_1:57311693-57311712 Msa1203250:CDS 30.0%
GTGTATATTGTTACCAATTG+CGG + chr8_1:57311770-57311789 None:intergenic 30.0%
ACAAAAAGATAATCTGGGAA+GGG + chr8_1:57311893-57311912 None:intergenic 30.0%
TACAAAAAGATAATCTGGGA+AGG + chr8_1:57311894-57311913 None:intergenic 30.0%
TGTACGAGATATTGAATTTG+AGG + chr8_1:57311950-57311969 None:intergenic 30.0%
CAATATCTCGTACATTAAAG+AGG - chr8_1:57311956-57311975 Msa1203250:intron 30.0%
TTATGATCATTACCATAGCT+AGG + chr8_1:57312265-57312284 None:intergenic 30.0%
! TTTTCTGATAACCAAACACT+TGG - chr8_1:57312343-57312362 Msa1203250:intron 30.0%
AGTGAAGGAATCAAAACAAA+AGG + chr8_1:57312431-57312450 None:intergenic 30.0%
! CTTTTTCTATGTATTCCTTG+TGG - chr8_1:57312517-57312536 Msa1203250:CDS 30.0%
! TTTGATTTACTACCTGATCT+CGG - chr8_1:57312757-57312776 Msa1203250:CDS 30.0%
! TTCAAATTTAGGATTAGGAC+GGG + chr8_1:57312887-57312906 None:intergenic 30.0%
! CCTCTTTCAAATTTAGGATT+AGG + chr8_1:57312892-57312911 None:intergenic 30.0%
CCTAATCCTAAATTTGAAAG+AGG - chr8_1:57312889-57312908 Msa1203250:five_prime_UTR 30.0%
TCCTAAATTTGAAAGAGGTT+TGG - chr8_1:57312894-57312913 Msa1203250:five_prime_UTR 30.0%
TCCAAACCTCTTTCAAATTT+AGG + chr8_1:57312898-57312917 None:intergenic 30.0%
GCAAATAAGTTGCTTGAAAT+GGG - chr8_1:57312976-57312995 Msa1203250:five_prime_UTR 30.0%
TGCAGTGAGAAATAAATTTG+TGG - chr8_1:57313115-57313134 Msa1203250:intron 30.0%
GCAGTGAGAAATAAATTTGT+GGG - chr8_1:57313116-57313135 Msa1203250:intron 30.0%
CACAGAACATTGAGTGAATT+TGG + chr8_1:57304921-57304940 None:intergenic 35.0%
! GCAGTGTTGAAATTGATTGA+AGG + chr8_1:57304948-57304967 None:intergenic 35.0%
!!! GGAACTTGTTTCGTTTTTTC+TGG - chr8_1:57305307-57305326 Msa1203250:three_prime_UTR 35.0%
TATTAAGAAAAAGCCGGTCA+CGG - chr8_1:57305416-57305435 Msa1203250:three_prime_UTR 35.0%
! CTCGGCATGATTTCAATTTT+CGG + chr8_1:57305543-57305562 None:intergenic 35.0%
AATTGAAATCATGCCGAGAA+AGG - chr8_1:57305545-57305564 Msa1203250:three_prime_UTR 35.0%
!!! GAGAAGAGTGGTTTTTTTTC+TGG - chr8_1:57305651-57305670 Msa1203250:three_prime_UTR 35.0%
TTGCATTCTTTGGATTCTCA+AGG - chr8_1:57305806-57305825 Msa1203250:three_prime_UTR 35.0%
CGTTCTGTTCAATACTCAAT+TGG - chr8_1:57306221-57306240 Msa1203250:intron 35.0%
! AAATTAGCTTATCCAACTGG+TGG + chr8_1:57306555-57306574 None:intergenic 35.0%
! CCAAAATTAGCTTATCCAAC+TGG + chr8_1:57306558-57306577 None:intergenic 35.0%
! CCAGTTGGATAAGCTAATTT+TGG - chr8_1:57306555-57306574 Msa1203250:three_prime_UTR 35.0%
!! GAATTTTTGAAAGGCTTGGT+CGG - chr8_1:57306597-57306616 Msa1203250:three_prime_UTR 35.0%
! TTCTTTAGGTGTTATGGCTT+GGG - chr8_1:57306701-57306720 Msa1203250:three_prime_UTR 35.0%
!! GTAAAACTATGTGGACTAGT+GGG - chr8_1:57306723-57306742 Msa1203250:three_prime_UTR 35.0%
!! AATGGCAAGTGCTATTTCAT+TGG - chr8_1:57306770-57306789 Msa1203250:three_prime_UTR 35.0%
!!! AAGAATTGCTTTTCAGGTCA+TGG - chr8_1:57306796-57306815 Msa1203250:three_prime_UTR 35.0%
GTCATGGAATCATAATTCCA+GGG - chr8_1:57306812-57306831 Msa1203250:intron 35.0%
! TAGCTCGTATTTTCTTGGAT+TGG - chr8_1:57307122-57307141 Msa1203250:intron 35.0%
! ACAATGAAAGTTGGTCTAGT+TGG - chr8_1:57307148-57307167 Msa1203250:intron 35.0%
TGAGGATTCCACTCATATAA+GGG - chr8_1:57307171-57307190 Msa1203250:intron 35.0%
CAATACATGGAACACTAGTT+TGG + chr8_1:57307293-57307312 None:intergenic 35.0%
CTCACTACAACTTCAATACA+TGG + chr8_1:57307306-57307325 None:intergenic 35.0%
!! ACTAAGAAGAATCGGTTTTC+AGG + chr8_1:57307420-57307439 None:intergenic 35.0%
!! TTCTTGTTGTGCTACGTTTT+GGG + chr8_1:57307522-57307541 None:intergenic 35.0%
!! TTTCTTGTTGTGCTACGTTT+TGG + chr8_1:57307523-57307542 None:intergenic 35.0%
TGCTATTGAGTGTTAATTGC+TGG + chr8_1:57307643-57307662 None:intergenic 35.0%
AGTTGTGTTTAGACTGTTGT+GGG + chr8_1:57307737-57307756 None:intergenic 35.0%
AAGTTGTGTTTAGACTGTTG+TGG + chr8_1:57307738-57307757 None:intergenic 35.0%
!! ATCAGGAATATAATGGGTGA+CGG + chr8_1:57307811-57307830 None:intergenic 35.0%
! GGTAACAAATGGGTTTAATC+AGG + chr8_1:57307828-57307847 None:intergenic 35.0%
! CGTCGATTAAGGTAACAAAT+GGG + chr8_1:57307838-57307857 None:intergenic 35.0%
! TCGTCGATTAAGGTAACAAA+TGG + chr8_1:57307839-57307858 None:intergenic 35.0%
TCTGTCAACACAAATATGTG+TGG + chr8_1:57307870-57307889 None:intergenic 35.0%
TTCTTAAGAGTCGAAACGTT+GGG + chr8_1:57307900-57307919 None:intergenic 35.0%
ATTCTTAAGAGTCGAAACGT+TGG + chr8_1:57307901-57307920 None:intergenic 35.0%
!! GTTTGCTACTTTAGATTTGG+TGG + chr8_1:57308380-57308399 None:intergenic 35.0%
!! GCTTGAGACTACTTTAGTTT+TGG + chr8_1:57308429-57308448 None:intergenic 35.0%
GGTTTGAGTGACTTGAAAAA+TGG + chr8_1:57308677-57308696 None:intergenic 35.0%
TTCTCTTAGGATCTCTATGT+AGG + chr8_1:57308698-57308717 None:intergenic 35.0%
TTCTCTCTCTTGATTCTCTT+AGG + chr8_1:57308711-57308730 None:intergenic 35.0%
CTTGGATCAAAAAACACCTT+GGG + chr8_1:57308767-57308786 None:intergenic 35.0%
AATTGACAAGAAAGTTGGCT+TGG + chr8_1:57308785-57308804 None:intergenic 35.0%
CTTAACCACTATACTCATGA+TGG - chr8_1:57308822-57308841 Msa1203250:intron 35.0%
TGAACTGAAACGAACTAAGA+GGG + chr8_1:57308958-57308977 None:intergenic 35.0%
ATGAACTGAAACGAACTAAG+AGG + chr8_1:57308959-57308978 None:intergenic 35.0%
AAAAACCTGAATTGAGGAGA+GGG + chr8_1:57309065-57309084 None:intergenic 35.0%
TGAAGCAAAAACCTGAATTG+AGG + chr8_1:57309071-57309090 None:intergenic 35.0%
GGCAGTTTATCATTAAATGC+GGG - chr8_1:57309206-57309225 Msa1203250:intron 35.0%
ATTAAATGCGGGCATAATAC+CGG - chr8_1:57309217-57309236 Msa1203250:intron 35.0%
!!! GTTTTGGAAAGTTGAATGGA+TGG + chr8_1:57309860-57309879 None:intergenic 35.0%
!!! TATTTTTTCAATCCTAGGGG+AGG + chr8_1:57309886-57309905 None:intergenic 35.0%
ATGCAGAGAGAAATGAATTG+GGG + chr8_1:57310098-57310117 None:intergenic 35.0%
GTTTATCATTGTTCTACTGC+TGG - chr8_1:57310453-57310472 Msa1203250:intron 35.0%
TAATCAAAGATTGTGCGATC+TGG - chr8_1:57310677-57310696 Msa1203250:intron 35.0%
TATTAGATCATTGCAACGAC+CGG - chr8_1:57310828-57310847 Msa1203250:intron 35.0%
!! ACTGTATTTGTTTCTGCAGT+TGG - chr8_1:57310878-57310897 Msa1203250:intron 35.0%
CTGTTAAATACCAGCTATAG+AGG - chr8_1:57311002-57311021 Msa1203250:intron 35.0%
TGTTATAATGCCTCTATAGC+TGG + chr8_1:57311015-57311034 None:intergenic 35.0%
ATACCAGTTCTATAGTGTTG+TGG - chr8_1:57311109-57311128 Msa1203250:intron 35.0%
TAAAAGCCCTATGAAGTATG+AGG - chr8_1:57311313-57311332 Msa1203250:intron 35.0%
GATAGTACCTCATACTTCAT+AGG + chr8_1:57311323-57311342 None:intergenic 35.0%
! ACAGTTCATCTGTAATGGAA+GGG - chr8_1:57311671-57311690 Msa1203250:CDS 35.0%
TCAAGCATATATCGAAGACA+AGG - chr8_1:57311726-57311745 Msa1203250:CDS 35.0%
CAAGCATATATCGAAGACAA+GGG - chr8_1:57311727-57311746 Msa1203250:CDS 35.0%
! AAAGCAATCACTCCATTTTG+TGG - chr8_1:57311829-57311848 Msa1203250:intron 35.0%
! GAGATATTGAATTTGAGGTC+TGG + chr8_1:57311945-57311964 None:intergenic 35.0%
AAAGCTGAACAAAATTGCAG+TGG - chr8_1:57311979-57311998 Msa1203250:intron 35.0%
TTCTTCGCAAAGAACATCTT+TGG - chr8_1:57312196-57312215 Msa1203250:intron 35.0%
TTTCATGACTTTCCATCCAA+TGG + chr8_1:57312372-57312391 None:intergenic 35.0%
TTGGATGGAAAGTCATGAAA+AGG - chr8_1:57312372-57312391 Msa1203250:intron 35.0%
ATGTTCAGAAGAGACACTAT+GGG - chr8_1:57312473-57312492 Msa1203250:intron 35.0%
!! ATTCCTTGTGGTTGTCATTT+TGG - chr8_1:57312529-57312548 Msa1203250:CDS 35.0%
TTTCCAAAATGACAACCACA+AGG + chr8_1:57312535-57312554 None:intergenic 35.0%
!! CATTTTAGGAGAATCATCAC+CGG + chr8_1:57312644-57312663 None:intergenic 35.0%
TTCTCCTAAAATGATTGAGC+AGG - chr8_1:57312651-57312670 Msa1203250:CDS 35.0%
TCTCCTAAAATGATTGAGCA+GGG - chr8_1:57312652-57312671 Msa1203250:CDS 35.0%
! TTTCCCTGCTCAATCATTTT+AGG + chr8_1:57312658-57312677 None:intergenic 35.0%
! GATAATTCTGAGAATCGAAG+TGG - chr8_1:57312697-57312716 Msa1203250:CDS 35.0%
TATGCTCAGAGACTAAAATC+TGG - chr8_1:57312853-57312872 Msa1203250:five_prime_UTR 35.0%
!! GTTTGGAAGAAGCATCAAAT+AGG - chr8_1:57312911-57312930 Msa1203250:five_prime_UTR 35.0%
GGCAAATAAGTTGCTTGAAA+TGG - chr8_1:57312975-57312994 Msa1203250:five_prime_UTR 35.0%
TCTTCCAATTTATCTGCATG+AGG + chr8_1:57313018-57313037 None:intergenic 35.0%
GTTTCGTTTATCTACCAGAA+AGG - chr8_1:57313068-57313087 Msa1203250:five_prime_UTR 35.0%
ACTTTCAAATCACCACCTTA+AGG - chr8_1:57313210-57313229 Msa1203250:intron 35.0%
! TTGCAGATTTTTCCTTAAGG+TGG + chr8_1:57313225-57313244 None:intergenic 35.0%
CTTATCTTGGTCCAACTTAT+TGG + chr8_1:57313266-57313285 None:intergenic 35.0%
TGATCTACTACACATATCAC+AGG + chr8_1:57313385-57313404 None:intergenic 35.0%
TGTAAATCTTCCTAAGCCTT+AGG - chr8_1:57313441-57313460 Msa1203250:five_prime_UTR 35.0%
ACATAGGTAAACATCTCCTA+AGG + chr8_1:57313460-57313479 None:intergenic 35.0%
ATTGCCTAGACTTGATTATG+AGG - chr8_1:57313501-57313520 Msa1203250:five_prime_UTR 35.0%
AAGACCTCATAATCAAGTCT+AGG + chr8_1:57313508-57313527 None:intergenic 35.0%
CAATCAATTTCAACACTGCG+AGG - chr8_1:57304949-57304968 Msa1203250:three_prime_UTR 40.0%
ATTTCAACACTGCGAGGTTT+CGG - chr8_1:57304955-57304974 Msa1203250:three_prime_UTR 40.0%
GCTCACACCACACTATTTAA+TGG - chr8_1:57304994-57305013 Msa1203250:three_prime_UTR 40.0%
! TTCCTTTGTTGACCCTTTTG+TGG - chr8_1:57305143-57305162 Msa1203250:three_prime_UTR 40.0%
TTCCACAAAAGGGTCAACAA+AGG + chr8_1:57305148-57305167 None:intergenic 40.0%
TACCACAGTGATTCAACTTG+TGG - chr8_1:57305207-57305226 Msa1203250:three_prime_UTR 40.0%
ACCACAGTGATTCAACTTGT+GGG - chr8_1:57305208-57305227 Msa1203250:three_prime_UTR 40.0%
ATTCAACTTGTGGGAAAAGC+AGG - chr8_1:57305217-57305236 Msa1203250:three_prime_UTR 40.0%
!! GCTGTAGTATTGGTTCAGAA+TGG - chr8_1:57305475-57305494 Msa1203250:three_prime_UTR 40.0%
GACTCAATAACCACCTTTCT+CGG + chr8_1:57305561-57305580 None:intergenic 40.0%
GGTGGTTATTGAGTCTATGA+AGG - chr8_1:57305566-57305585 Msa1203250:three_prime_UTR 40.0%
!! TGTCAAGTTGAGTGTGCATA+GGG - chr8_1:57305617-57305636 Msa1203250:three_prime_UTR 40.0%
GATGTTCTGATAGAGAAGAG+TGG - chr8_1:57305639-57305658 Msa1203250:three_prime_UTR 40.0%
TGGAAAGATTTCGGAACAGT+CGG - chr8_1:57305671-57305690 Msa1203250:three_prime_UTR 40.0%
TCTTCAAATCAGTGATTGCG+AGG - chr8_1:57305704-57305723 Msa1203250:three_prime_UTR 40.0%
ATGTAGTTGCTAGTGGCATT+TGG + chr8_1:57305890-57305909 None:intergenic 40.0%
CAAGAAATGCATTCACAGCA+TGG + chr8_1:57306647-57306666 None:intergenic 40.0%
CATGCTGTGAATGCATTTCT+TGG - chr8_1:57306645-57306664 Msa1203250:three_prime_UTR 40.0%
TTGGTTGTGCAAGTTTCTCT+TGG - chr8_1:57306664-57306683 Msa1203250:three_prime_UTR 40.0%
CCTAAAGAAGGTGGAATATG+AGG + chr8_1:57306690-57306709 None:intergenic 40.0%
CCTCATATTCCACCTTCTTT+AGG - chr8_1:57306687-57306706 Msa1203250:three_prime_UTR 40.0%
TCCACCTTCTTTAGGTGTTA+TGG - chr8_1:57306695-57306714 Msa1203250:three_prime_UTR 40.0%
CAAGCCATAACACCTAAAGA+AGG + chr8_1:57306702-57306721 None:intergenic 40.0%
! CTTCTTTAGGTGTTATGGCT+TGG - chr8_1:57306700-57306719 Msa1203250:three_prime_UTR 40.0%
! ATGGCTTGGGTAAAACTATG+TGG - chr8_1:57306714-57306733 Msa1203250:three_prime_UTR 40.0%
!! GGTAAAACTATGTGGACTAG+TGG - chr8_1:57306722-57306741 Msa1203250:three_prime_UTR 40.0%
!! TGGTGGAAGAATTGCTTTTC+AGG - chr8_1:57306790-57306809 Msa1203250:three_prime_UTR 40.0%
GGTCATGGAATCATAATTCC+AGG - chr8_1:57306811-57306830 Msa1203250:intron 40.0%
! TGGCATTTTCTTTCTTGCAG+AGG - chr8_1:57306836-57306855 Msa1203250:intron 40.0%
ACGGAACAAACAAACGTACA+AGG + chr8_1:57307030-57307049 None:intergenic 40.0%
! TGTCGTAGCTCGTATTTTCT+TGG - chr8_1:57307117-57307136 Msa1203250:intron 40.0%
GTGAGGATTCCACTCATATA+AGG - chr8_1:57307170-57307189 Msa1203250:intron 40.0%
!! TATAAGCGCTTTTTGCGGTT+TGG - chr8_1:57307227-57307246 Msa1203250:intron 40.0%
!! ATAAGCGCTTTTTGCGGTTT+GGG - chr8_1:57307228-57307247 Msa1203250:intron 40.0%
GCATAGCCAATCAATTTCTG+AGG + chr8_1:57307469-57307488 None:intergenic 40.0%
! GGGGTTCAGAATTCGATTTT+AGG + chr8_1:57307491-57307510 None:intergenic 40.0%
TGTTGTGGGAACAACAGATT+AGG + chr8_1:57307723-57307742 None:intergenic 40.0%
! GGAAAGTGAATCGTCGATTA+AGG + chr8_1:57307849-57307868 None:intergenic 40.0%
TCTTAAGAGTCGAAACGTTG+GGG + chr8_1:57307899-57307918 None:intergenic 40.0%
AGTTAATCCGCAACAACGAA+CGG - chr8_1:57308048-57308067 Msa1203250:intron 40.0%
TAATGAGATCTCACTACCCA+AGG - chr8_1:57308748-57308767 Msa1203250:intron 40.0%
GCTTGGATCAAAAAACACCT+TGG + chr8_1:57308768-57308787 None:intergenic 40.0%
CATGACCAAGATTTGAAAGG+TGG + chr8_1:57309010-57309029 None:intergenic 40.0%
CACCTTTCAAATCTTGGTCA+TGG - chr8_1:57309008-57309027 Msa1203250:intron 40.0%
CACCATGACCAAGATTTGAA+AGG + chr8_1:57309013-57309032 None:intergenic 40.0%
CTTTCAAATCTTGGTCATGG+TGG - chr8_1:57309011-57309030 Msa1203250:intron 40.0%
CAAAAACCTGAATTGAGGAG+AGG + chr8_1:57309066-57309085 None:intergenic 40.0%
CCAAAACCAACTGAAAAGTG+TGG + chr8_1:57309385-57309404 None:intergenic 40.0%
!! CCACACTTTTCAGTTGGTTT+TGG - chr8_1:57309382-57309401 Msa1203250:intron 40.0%
AAGGAATTGACACACCCATA+AGG - chr8_1:57309439-57309458 Msa1203250:intron 40.0%
AGTTGAACCCACTACCTTAT+GGG + chr8_1:57309456-57309475 None:intergenic 40.0%
TAACTGCTCTTTGAGCCTTA+AGG - chr8_1:57309526-57309545 Msa1203250:intron 40.0%
! TTCAAGTGAGTTGAACTCCT+AGG + chr8_1:57309573-57309592 None:intergenic 40.0%
CGTGGAGAGAAAGTTCATAT+TGG - chr8_1:57309736-57309755 Msa1203250:intron 40.0%
TGCTGGAGTACAATCTGTAA+GGG - chr8_1:57310470-57310489 Msa1203250:intron 40.0%
ATTAGATCATTGCAACGACC+GGG - chr8_1:57310829-57310848 Msa1203250:intron 40.0%
!! GATTGCTCTGAGACAAATCA+AGG - chr8_1:57311565-57311584 Msa1203250:CDS 40.0%
ACAAATCAAGGAGCAGCTTA+CGG - chr8_1:57311577-57311596 Msa1203250:CDS 40.0%
CAGTGACAGTTCATCTGTAA+TGG - chr8_1:57311666-57311685 Msa1203250:CDS 40.0%
! GACAGTTCATCTGTAATGGA+AGG - chr8_1:57311670-57311689 Msa1203250:CDS 40.0%
CATATATCGAAGACAAGGGA+AGG - chr8_1:57311731-57311750 Msa1203250:intron 40.0%
ACACCAAGTCTTTGCAAATC+AGG + chr8_1:57312014-57312033 None:intergenic 40.0%
!! AGACTTGGTGTTTGTACATC+CGG - chr8_1:57312023-57312042 Msa1203250:intron 40.0%
! TTGATCTCCAATGGACTTTC+CGG + chr8_1:57312045-57312064 None:intergenic 40.0%
!! TGAGAGTGCTGTTAAGTGTA+AGG - chr8_1:57312306-57312325 Msa1203250:intron 40.0%
CATGTTCAGAAGAGACACTA+TGG - chr8_1:57312472-57312491 Msa1203250:intron 40.0%
TCGAAAGCTTAAATTCGGCA+GGG + chr8_1:57312594-57312613 None:intergenic 40.0%
ATCGAAAGCTTAAATTCGGC+AGG + chr8_1:57312595-57312614 None:intergenic 40.0%
GAGCAACTAACATTGTCTAC+CGG - chr8_1:57312622-57312641 Msa1203250:CDS 40.0%
!! AAGAAGCATCAAATAGGACC+AGG - chr8_1:57312917-57312936 Msa1203250:five_prime_UTR 40.0%
ATCAAATAGGACCAGGAGAA+GGG - chr8_1:57312924-57312943 Msa1203250:five_prime_UTR 40.0%
GGAAGAATCTCAATGCTTAG+AGG - chr8_1:57313032-57313051 Msa1203250:five_prime_UTR 40.0%
AATTTGTGGGAATTGGCATC+AGG - chr8_1:57313129-57313148 Msa1203250:intron 40.0%
GATGAGTTCATTTGTGCAAG+AGG - chr8_1:57313151-57313170 Msa1203250:intron 40.0%
AGATCCTGCAACCAATAAGT+TGG - chr8_1:57313252-57313271 Msa1203250:intron 40.0%
CGACAGAGTGAAACTTATCT+TGG + chr8_1:57313279-57313298 None:intergenic 40.0%
GTAAACATCTCCTAAGGCTT+AGG + chr8_1:57313454-57313473 None:intergenic 40.0%
!! AAGCATCGACTTTGTCACAT+AGG + chr8_1:57313476-57313495 None:intergenic 40.0%
GTGACAAAGTCGATGCTTTA+TGG - chr8_1:57313478-57313497 Msa1203250:five_prime_UTR 40.0%
AGGTTTCGGAAGAGCTATAG+AGG - chr8_1:57304969-57304988 Msa1203250:three_prime_UTR 45.0%
! TCCCACAAGTTGAATCACTG+TGG + chr8_1:57305212-57305231 None:intergenic 45.0%
AAGCAGGTTCAGCGAAAGAA+AGG - chr8_1:57305233-57305252 Msa1203250:three_prime_UTR 45.0%
TGGCGATGAAGGATAGCTAT+CGG + chr8_1:57305373-57305392 None:intergenic 45.0%
! ATTTTCAGTCGTGCCTGTAG+TGG + chr8_1:57305393-57305412 None:intergenic 45.0%
GTGCAAGTGAGTGAAAGAAG+AGG - chr8_1:57305438-57305457 Msa1203250:three_prime_UTR 45.0%
GATGATCGACGCTGTAGTAT+TGG - chr8_1:57305465-57305484 Msa1203250:three_prime_UTR 45.0%
TGAAATCATGCCGAGAAAGG+TGG - chr8_1:57305548-57305567 Msa1203250:three_prime_UTR 45.0%
!! CTGTCAAGTTGAGTGTGCAT+AGG - chr8_1:57305616-57305635 Msa1203250:three_prime_UTR 45.0%
!! AGTGTGTTGTCAAGTTGGCA+TGG - chr8_1:57306466-57306485 Msa1203250:three_prime_UTR 45.0%
GTGCATATTTCTCCACCAGT+TGG - chr8_1:57306540-57306559 Msa1203250:three_prime_UTR 45.0%
!! TTTTTGAAAGGCTTGGTCGG+TGG - chr8_1:57306600-57306619 Msa1203250:three_prime_UTR 45.0%
GCCATAACACCTAAAGAAGG+TGG + chr8_1:57306699-57306718 None:intergenic 45.0%
GTGGGTCTGCTAATTGTTCA+AGG - chr8_1:57306741-57306760 Msa1203250:three_prime_UTR 45.0%
!! GGCAAGTGCTATTTCATTGG+TGG - chr8_1:57306773-57306792 Msa1203250:three_prime_UTR 45.0%
TGGAATCATAATTCCAGGGC+TGG - chr8_1:57306816-57306835 Msa1203250:intron 45.0%
AAGAAAGAAAATGCCAGCCC+TGG + chr8_1:57306832-57306851 None:intergenic 45.0%
GATTGGCGCACAATGAAAGT+TGG - chr8_1:57307139-57307158 Msa1203250:intron 45.0%
! GAAAGTTGGTCTAGTTGGTG+AGG - chr8_1:57307153-57307172 Msa1203250:intron 45.0%
CAGCAAGACCCTTATATGAG+TGG + chr8_1:57307182-57307201 None:intergenic 45.0%
CACTCATATAAGGGTCTTGC+TGG - chr8_1:57307180-57307199 Msa1203250:intron 45.0%
!! TAAGCGCTTTTTGCGGTTTG+GGG - chr8_1:57307229-57307248 Msa1203250:intron 45.0%
!! CTCTAGAACTCACGTATGCA+GGG + chr8_1:57307259-57307278 None:intergenic 45.0%
!! TCTCTAGAACTCACGTATGC+AGG + chr8_1:57307260-57307279 None:intergenic 45.0%
!!! TACGTTTTGGGAGGTTTCTG+GGG + chr8_1:57307510-57307529 None:intergenic 45.0%
!!! CTACGTTTTGGGAGGTTTCT+GGG + chr8_1:57307511-57307530 None:intergenic 45.0%
!! TTGTTGTGCTACGTTTTGGG+AGG + chr8_1:57307519-57307538 None:intergenic 45.0%
AATGTCCCATGATCCTCAGA+TGG + chr8_1:57307771-57307790 None:intergenic 45.0%
! CGTTGTTGCGGATTAACTCA+GGG + chr8_1:57308046-57308065 None:intergenic 45.0%
! TCGTTGTTGCGGATTAACTC+AGG + chr8_1:57308047-57308066 None:intergenic 45.0%
TCCAATTCCGTTCGTTGTTG+CGG + chr8_1:57308058-57308077 None:intergenic 45.0%
GGGTAGTGAGATCTCATTAG+AGG + chr8_1:57308747-57308766 None:intergenic 45.0%
TTGCGCCACCTTTCAAATCT+TGG - chr8_1:57309002-57309021 Msa1203250:intron 45.0%
ATACTCCCTCTCCTCAATTC+AGG - chr8_1:57309057-57309076 Msa1203250:intron 45.0%
!!! GGTAGCACCGGTTTTCAAAT+TGG + chr8_1:57309308-57309327 None:intergenic 45.0%
TCTTGAGTCCTGAGTTGTGT+TGG + chr8_1:57309329-57309348 None:intergenic 45.0%
! GACACACCACACTTTTCAGT+TGG - chr8_1:57309376-57309395 Msa1203250:intron 45.0%
! CTAATGAAGGTTGGCTCAGT+TGG - chr8_1:57309415-57309434 Msa1203250:intron 45.0%
TTGACACACCCATAAGGTAG+TGG - chr8_1:57309445-57309464 Msa1203250:intron 45.0%
TGACACACCCATAAGGTAGT+GGG - chr8_1:57309446-57309465 Msa1203250:intron 45.0%
GAGTTGAACCCACTACCTTA+TGG + chr8_1:57309457-57309476 None:intergenic 45.0%
TTCCAAAACAAACCTCCCCT+AGG - chr8_1:57309871-57309890 Msa1203250:intron 45.0%
!! ATCCTAGGGGAGGTTTGTTT+TGG + chr8_1:57309876-57309895 None:intergenic 45.0%
AATGAATTGGGGACCATGGA+AGG + chr8_1:57310087-57310106 None:intergenic 45.0%
GAGAAATGAATTGGGGACCA+TGG + chr8_1:57310091-57310110 None:intergenic 45.0%
! TACAGATCGTGGCCTTGATT+AGG - chr8_1:57310430-57310449 Msa1203250:intron 45.0%
! ACAGATCGTGGCCTTGATTA+GGG - chr8_1:57310431-57310450 Msa1203250:intron 45.0%
CTGCTGGAGTACAATCTGTA+AGG - chr8_1:57310469-57310488 Msa1203250:intron 45.0%
GATGACTAAAACACTGGGCT+GGG + chr8_1:57310758-57310777 None:intergenic 45.0%
TGATGACTAAAACACTGGGC+TGG + chr8_1:57310759-57310778 None:intergenic 45.0%
ACGCCACAACACTATAGAAC+TGG + chr8_1:57311115-57311134 None:intergenic 45.0%
TTAGATTGGAGCAGTCAGCA+TGG - chr8_1:57311528-57311547 Msa1203250:CDS 45.0%
! CTTGACATTGTCGACCCTTT+TGG + chr8_1:57311711-57311730 None:intergenic 45.0%
! GCAATCACTCCATTTTGTGG+AGG - chr8_1:57311832-57311851 Msa1203250:intron 45.0%
GCAGTTGTACCTCCACAAAA+TGG + chr8_1:57311844-57311863 None:intergenic 45.0%
ACATCTGCACAAAGCTGAGA+TGG - chr8_1:57311918-57311937 Msa1203250:intron 45.0%
CATCTGCACAAAGCTGAGAT+GGG - chr8_1:57311919-57311938 Msa1203250:intron 45.0%
GTCTTTGCAAATCAGGCTCT+GGG + chr8_1:57312007-57312026 None:intergenic 45.0%
AGTCTTTGCAAATCAGGCTC+TGG + chr8_1:57312008-57312027 None:intergenic 45.0%
! GAGCCTGATTTGCAAAGACT+TGG - chr8_1:57312008-57312027 Msa1203250:intron 45.0%
TGTACATCCGGAAAGTCCAT+TGG - chr8_1:57312035-57312054 Msa1203250:intron 45.0%
AGCTTTCCGGTAATGATCAG+TGG - chr8_1:57312230-57312249 Msa1203250:intron 45.0%
ACCAAACACTTGGCAACCAT+TGG - chr8_1:57312353-57312372 Msa1203250:intron 45.0%
TCCAATGGTTGCCAAGTGTT+TGG + chr8_1:57312357-57312376 None:intergenic 45.0%
AACACTTGGCAACCATTGGA+TGG - chr8_1:57312357-57312376 Msa1203250:intron 45.0%
! GTCATGAAAAGGAAGCACAG+TGG - chr8_1:57312383-57312402 Msa1203250:intron 45.0%
AAGAGACACTATGGGCAGTT+TGG - chr8_1:57312481-57312500 Msa1203250:intron 45.0%
CCATATGAGCAGCTTGATGA+TGG + chr8_1:57312786-57312805 None:intergenic 45.0%
CCATCATCAAGCTGCTCATA+TGG - chr8_1:57312783-57312802 Msa1203250:exon 45.0%
CATCAAATAGGACCAGGAGA+AGG - chr8_1:57312923-57312942 Msa1203250:five_prime_UTR 45.0%
!! ATTAGCTTTAGCCCTTCTCC+TGG + chr8_1:57312938-57312957 None:intergenic 45.0%
TTTATCTGCATGAGGCTGGA+TGG + chr8_1:57313010-57313029 None:intergenic 45.0%
CCAATTTATCTGCATGAGGC+TGG + chr8_1:57313014-57313033 None:intergenic 45.0%
CCAGCCTCATGCAGATAAAT+TGG - chr8_1:57313011-57313030 Msa1203250:five_prime_UTR 45.0%
ACCAGAAAGGCTCTATCTGA+AGG - chr8_1:57313081-57313100 Msa1203250:five_prime_UTR 45.0%
ACAAAACCCAGTCACTCACT+TGG - chr8_1:57313183-57313202 Msa1203250:intron 45.0%
! TGGTCCAACTTATTGGTTGC+AGG + chr8_1:57313259-57313278 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTTAGA+GGG + chr8_1:57304858-57304877 None:intergenic 5.0%
CTATCCTTCATCGCCACTAC+AGG - chr8_1:57305377-57305396 Msa1203250:three_prime_UTR 50.0%
!!! GCTACGTTTTGGGAGGTTTC+TGG + chr8_1:57307512-57307531 None:intergenic 50.0%
TCGCTCCATCTGAGGATCAT+GGG - chr8_1:57307763-57307782 Msa1203250:intron 50.0%
TCCGCAACAACGAACGGAAT+TGG - chr8_1:57308054-57308073 Msa1203250:intron 50.0%
ATCCAGTGTGACCTGTGTCT+TGG - chr8_1:57308553-57308572 Msa1203250:intron 50.0%
TCCAGTGTGACCTGTGTCTT+GGG - chr8_1:57308554-57308573 Msa1203250:intron 50.0%
CAGGCCCATCATGAGTATAG+TGG + chr8_1:57308830-57308849 None:intergenic 50.0%
TGATGTAGCCAAGCCTTGAC+AGG - chr8_1:57308885-57308904 Msa1203250:intron 50.0%
!! CTGAGTTGTGTTGGTAGCAC+CGG + chr8_1:57309320-57309339 None:intergenic 50.0%
! GAAGGTTGGCTCAGTTGGTA+AGG - chr8_1:57309420-57309439 Msa1203250:intron 50.0%
CAGGGTCAAGACAGTCCTTA+AGG + chr8_1:57309544-57309563 None:intergenic 50.0%
CTTAAGGACTGTCTTGACCC+TGG - chr8_1:57309542-57309561 Msa1203250:intron 50.0%
TGAACTCCTAGGACTCACCA+GGG + chr8_1:57309562-57309581 None:intergenic 50.0%
TTGAACTCCTAGGACTCACC+AGG + chr8_1:57309563-57309582 None:intergenic 50.0%
!! AATGAAAAGTGCTGGCGCTG+CGG + chr8_1:57310010-57310029 None:intergenic 50.0%
AGGAGTCAAGTGGAGTGGAT+TGG + chr8_1:57310067-57310086 None:intergenic 50.0%
ATGGAAGGAGTCAAGTGGAG+TGG + chr8_1:57310072-57310091 None:intergenic 50.0%
ACTCCACTTGACTCCTTCCA+TGG - chr8_1:57310071-57310090 Msa1203250:intron 50.0%
TCCGGTAATGATCAGTGGAC+AGG - chr8_1:57312235-57312254 Msa1203250:intron 50.0%
GCCTGTCCACTGATCATTAC+CGG + chr8_1:57312239-57312258 None:intergenic 50.0%
GAAGCACAGTGGTTGTTCAG+AGG - chr8_1:57312394-57312413 Msa1203250:intron 50.0%
CTGAGAATCGAAGTGGTTCG+CGG - chr8_1:57312704-57312723 Msa1203250:CDS 50.0%
GTTCGCGGAAGTTTAGTTGC+AGG - chr8_1:57312719-57312738 Msa1203250:CDS 50.0%
GCCTTCAGATAGAGCCTTTC+TGG + chr8_1:57313085-57313104 None:intergenic 50.0%
GTGATGCCAAGTGAGTGACT+GGG + chr8_1:57313192-57313211 None:intergenic 50.0%
AGTGATGCCAAGTGAGTGAC+TGG + chr8_1:57313193-57313212 None:intergenic 50.0%
GCGACGACCCTAATCTCATA+TGG + chr8_1:57313312-57313331 None:intergenic 50.0%
GAGATTAGGGTCGTCGCAAA+AGG - chr8_1:57313315-57313334 Msa1203250:intron 50.0%
TCACTCACTTGCACCGTGAC+CGG + chr8_1:57305432-57305451 None:intergenic 55.0%
CTTTGCAGTCGCTCCATCTG+AGG - chr8_1:57307755-57307774 Msa1203250:intron 55.0%
GTCGCTCCATCTGAGGATCA+TGG - chr8_1:57307762-57307781 Msa1203250:intron 55.0%
TCCCAAGACACAGGTCACAC+TGG + chr8_1:57308558-57308577 None:intergenic 55.0%
AGCCAAGCCTTGACAGGCTT+TGG - chr8_1:57308891-57308910 Msa1203250:intron 55.0%
GCCAAGCCTTGACAGGCTTT+GGG - chr8_1:57308892-57308911 Msa1203250:intron 55.0%
!! CGGTGCTACCAACACAACTC+AGG - chr8_1:57309318-57309337 Msa1203250:intron 55.0%
TCTTGACCCTGGTGAGTCCT+AGG - chr8_1:57309553-57309572 Msa1203250:intron 55.0%
GGACCATGGAAGGAGTCAAG+TGG + chr8_1:57310077-57310096 None:intergenic 55.0%
CAGTGCGTGAGAACCGCAAT+TGG - chr8_1:57311754-57311773 Msa1203250:intron 55.0%
! TGTGGAGGTACAACTGCTGC+TGG - chr8_1:57311847-57311866 Msa1203250:intron 55.0%
GGCGAAACGCTCAAGCTTTC+CGG - chr8_1:57312217-57312236 Msa1203250:intron 55.0%
TGGACAGGCTCTCCTAGCTA+TGG - chr8_1:57312250-57312269 Msa1203250:intron 55.0%
!! TGATGATGGCGACCGAGATC+AGG + chr8_1:57312772-57312791 None:intergenic 55.0%
AGGGTCGTCGCAAAAGGCTA+TGG - chr8_1:57313321-57313340 Msa1203250:intron 55.0%
CGTGCCTGTAGTGGCGATGA+AGG + chr8_1:57305384-57305403 None:intergenic 60.0%
GCTGCTCTCTCCCAAGACAC+AGG + chr8_1:57308567-57308586 None:intergenic 60.0%
GCCCAAAGCCTGTCAAGGCT+TGG + chr8_1:57308896-57308915 None:intergenic 60.0%
! GGTTGGCCCAAAGCCTGTCA+AGG + chr8_1:57308901-57308920 None:intergenic 60.0%
ACTCTTTGCCAAGCGCCTGC+TGG + chr8_1:57312821-57312840 None:intergenic 60.0%
AGCAGGCGCTTGGCAAAGAG+TGG - chr8_1:57312820-57312839 Msa1203250:five_prime_UTR 60.0%
TGGAGCGCGATCTAGCCAGC+AGG - chr8_1:57312803-57312822 Msa1203250:five_prime_UTR 65.0%
CGATCTAGCCAGCAGGCGCT+TGG - chr8_1:57312810-57312829 Msa1203250:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 57304798 57313542 57304798 ID=Msa1203250;Name=Msa1203250
chr8_1 mRNA 57304798 57313542 57304798 ID=Msa1203250-mRNA-1;Parent=Msa1203250;Name=Msa1203250-mRNA-1;_AED=0.30;_eAED=0.30;_QI=558|1|1|1|0.4|0.16|6|1920|209
chr8_1 exon 57304798 57306172 57304798 ID=Msa1203250-mRNA-1:exon:18677;Parent=Msa1203250-mRNA-1
chr8_1 exon 57306273 57306815 57306273 ID=Msa1203250-mRNA-1:exon:18676;Parent=Msa1203250-mRNA-1
chr8_1 exon 57307814 57307905 57307814 ID=Msa1203250-mRNA-1:exon:18675;Parent=Msa1203250-mRNA-1
chr8_1 exon 57311483 57311749 57311483 ID=Msa1203250-mRNA-1:exon:18674;Parent=Msa1203250-mRNA-1
chr8_1 exon 57312513 57313125 57312513 ID=Msa1203250-mRNA-1:exon:18673;Parent=Msa1203250-mRNA-1
chr8_1 exon 57313325 57313542 57313325 ID=Msa1203250-mRNA-1:exon:18672;Parent=Msa1203250-mRNA-1
chr8_1 five_prime_UTR 57313325 57313542 57313325 ID=Msa1203250-mRNA-1:five_prime_utr;Parent=Msa1203250-mRNA-1
chr8_1 five_prime_UTR 57312786 57313125 57312786 ID=Msa1203250-mRNA-1:five_prime_utr;Parent=Msa1203250-mRNA-1
chr8_1 CDS 57312513 57312785 57312513 ID=Msa1203250-mRNA-1:cds;Parent=Msa1203250-mRNA-1
chr8_1 CDS 57311483 57311749 57311483 ID=Msa1203250-mRNA-1:cds;Parent=Msa1203250-mRNA-1
chr8_1 CDS 57307816 57307905 57307816 ID=Msa1203250-mRNA-1:cds;Parent=Msa1203250-mRNA-1
chr8_1 three_prime_UTR 57307814 57307815 57307814 ID=Msa1203250-mRNA-1:three_prime_utr;Parent=Msa1203250-mRNA-1
chr8_1 three_prime_UTR 57306273 57306815 57306273 ID=Msa1203250-mRNA-1:three_prime_utr;Parent=Msa1203250-mRNA-1
chr8_1 three_prime_UTR 57304798 57306172 57304798 ID=Msa1203250-mRNA-1:three_prime_utr;Parent=Msa1203250-mRNA-1
Gene Sequence

>Msa1203250

ATGCCGAGAAAGGTGGTTATTGAGTCTATGAAGGTTGTTTTATTAGGGAAAGAAGGATTTTCTGTCAAGTTGAGTGTGCATAGGGATGTTCTGATAGAGAAGAGTGGTTTTTTTTCTGGAAAGATTTCGGAACAGTCGGATTTGTCTTGTCTTCAAATCAGTGATTGCGAGGATGTTGAAATATATGTTGAAGCTGTTGGTTTTATGTATTGCAAAGAAATGAAACTGCGGCTTATGAAACAGAATGTTTCTTGCATTCTTTGGATTCTCAAGTTAATTGAATTTTTGAAAGGCTTGGTCGGTGGAGTCATGTTCATTTTTTCAATCCATGCTGTGAATGCATTTCTTGGTTGTGCAAGTTTCTCTTGGCCTCATATTCCACCTTCTTTAGGTGTTATGGCTTGGGTAAAACTATGTGGACTAGTGGGTCTGCTAATTGTTCAAGGAACTGTAATGGCAAGTGCTATTTCATTGGTGGAAGAATTGCTTTTCAGGTCATGGAATCATAATTCCAGGGCTGGCATTTTCTTTCTTGCAGAGATCGTGGCCTTGATTAGGGTTTATCATTGTTCTACTGCTGGAGTACAATCTGTAAGGGTTTTGCGCTGTTTTGAATGTGCAAAAGATTAA

Protein sequence

>Msa1203250

MPRKVVIESMKVVLLGKEGFSVKLSVHRDVLIEKSGFFSGKISEQSDLSCLQISDCEDVEIYVEAVGFMYCKEMKLRLMKQNVSCILWILKLIEFLKGLVGGVMFIFSIHAVNAFLGCASFSWPHIPPSLGVMAWVKLCGLVGLLIVQGTVMASAISLVEELLFRSWNHNSRAGIFFLAEIVALIRVYHCSTAGVQSVRVLRCFECAKD*