Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154730 | KEH23328.1 | 72.268 | 732 | 95 | 6 | 3 | 630 | 1 | 728 | 0.0 | 1017 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154730 | sp|Q9H8Y5|ANKZ1_HUMAN | 35.410 | 305 | 159 | 9 | 46 | 326 | 62 | 352 | 5.65e-38 | 155 |
| Msa1154730 | sp|Q9H8Y5|ANKZ1_HUMAN | 43.548 | 124 | 70 | 0 | 334 | 457 | 537 | 660 | 7.55e-12 | 72.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154730 | A0A072U2A1 | 72.268 | 732 | 95 | 6 | 3 | 630 | 1 | 728 | 0.0 | 1017 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016580 | Msa1154730 | 0.800142 | 1.655529e-48 | -8.615850e-47 |
| Msa0766630 | Msa1154730 | 0.807506 | 4.888539e-50 | -8.615850e-47 |
| Msa1029240 | Msa1154730 | 0.825429 | 4.709471e-54 | -8.615850e-47 |
| Msa1065570 | Msa1154730 | 0.836228 | 1.057906e-56 | -8.615850e-47 |
| Msa1111150 | Msa1154730 | 0.819820 | 9.498734e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154730 | MtrunA17_Chr7g0246001 | 69.950 | 599 | 79 | 5 | 129 | 630 | 18 | 612 | 0.0 | 795 |
| Msa1154730 | MtrunA17_Chr7g0245981 | 61.244 | 627 | 120 | 15 | 3 | 515 | 1 | 618 | 0.0 | 623 |
| Msa1154730 | MtrunA17_Chr7g0245991 | 72.532 | 233 | 26 | 2 | 646 | 878 | 1 | 195 | 8.81e-100 | 309 |
| Msa1154730 | MtrunA17_Chr7g0246021 | 70.857 | 175 | 16 | 4 | 84 | 251 | 25 | 171 | 1.55e-67 | 222 |
| Msa1154730 | MtrunA17_Chr7g0246011 | 83.529 | 85 | 14 | 0 | 3 | 87 | 1 | 85 | 4.97e-44 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154730 | AT1G01930.1 | 47.368 | 570 | 202 | 10 | 3 | 475 | 12 | 580 | 4.44e-152 | 459 |
Find 215 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACTTTCAGAAGGTTTA+TGG | 0.142260 | 7_4:+42337063 | Msa1154730:CDS |
| ATTCAAAACGCCGTTGTTTC+GGG | 0.187219 | 7_4:+42334621 | Msa1154730:CDS |
| ACAAATCAAACGACGGAAAT+AGG | 0.190968 | 7_4:-42339807 | None:intergenic |
| TGAGGATTTGAAGAAAATTA+TGG | 0.217654 | 7_4:+42339609 | Msa1154730:CDS |
| TTGTGATTCTTCCATTTCTT+TGG | 0.232877 | 7_4:-42337140 | None:intergenic |
| CAACGAACCTGCATTTAAAA+AGG | 0.243733 | 7_4:+42336375 | Msa1154730:CDS |
| AAAATAGCCAATGATATTCT+TGG | 0.256295 | 7_4:+42339149 | Msa1154730:CDS |
| TATTCAAAACGCCGTTGTTT+CGG | 0.260081 | 7_4:+42334620 | Msa1154730:CDS |
| TTTACTTGGGAAGGTGATTA+TGG | 0.276458 | 7_4:+42339055 | Msa1154730:CDS |
| GTTGGCAAGAGAGGATTTAT+TGG | 0.291660 | 7_4:+42334428 | None:intergenic |
| GTGCAAGAGGTGAAGGAGTC+TGG | 0.303169 | 7_4:+42338984 | Msa1154730:CDS |
| TTTGCTGGTTGTGTCTTTGA+TGG | 0.304286 | 7_4:+42335692 | Msa1154730:CDS |
| TGCTTCCCTGAGAGTAGGCC+TGG | 0.308283 | 7_4:-42336840 | None:intergenic |
| AGTTGTAATGGGAGGGGAGG+GGG | 0.316803 | 7_4:-42334459 | None:intergenic |
| TGTAAAGGTTATGGAACTTT+TGG | 0.318449 | 7_4:+42336964 | Msa1154730:CDS |
| AGAGGAGTTCAAGACCTATT+TGG | 0.318952 | 7_4:+42338623 | Msa1154730:CDS |
| TGGTGCTGCTGAAGCAAAAT+TGG | 0.321217 | 7_4:+42338683 | Msa1154730:CDS |
| AACCTTCGCTCTGCTTTACT+TGG | 0.321565 | 7_4:+42339041 | Msa1154730:CDS |
| AGCGGCTGCATGCGGTTCTA+AGG | 0.338937 | 7_4:+42338821 | Msa1154730:CDS |
| GCATCCGGCAGGCACTTTGC+TGG | 0.342630 | 7_4:+42335677 | Msa1154730:CDS |
| GCAATCCACAACGAAGGATA+TGG | 0.342819 | 7_4:+42339582 | Msa1154730:CDS |
| CATAGGATACTAGGGTCAAC+TGG | 0.349029 | 7_4:-42336877 | None:intergenic |
| CTGTGATGTGTCAAGTATAT+CGG | 0.356631 | 7_4:+42335436 | Msa1154730:CDS |
| TTCTTCCTTCACCTAGGAAA+TGG | 0.359298 | 7_4:+42338847 | Msa1154730:CDS |
| GTTGCTCTCGTCTGCTTCAT+AGG | 0.359473 | 7_4:-42336894 | None:intergenic |
| CGTCTGCTTCATAGGATACT+AGG | 0.361152 | 7_4:-42336886 | None:intergenic |
| AGCTAGAGCAAAAGAATTAG+AGG | 0.361760 | 7_4:+42337432 | Msa1154730:CDS |
| TCTTCCATTTCTTTGGTCAA+TGG | 0.370115 | 7_4:-42337133 | None:intergenic |
| GCAATCGGCTGCGAAGGATA+TGG | 0.370770 | 7_4:+42339519 | Msa1154730:CDS |
| ATGCCATTGTTAGTTGTAAT+GGG | 0.372947 | 7_4:-42334470 | None:intergenic |
| TGGCTTCAAATCTTGACAAA+TGG | 0.380995 | 7_4:+42337083 | Msa1154730:CDS |
| TTGTGGGACGGGAGGTTTGA+TGG | 0.384306 | 7_4:+42338921 | Msa1154730:CDS |
| GGACCAATTTCAACCTGTAC+TGG | 0.385083 | 7_4:+42339076 | Msa1154730:CDS |
| GCAATCCGCAGAAAAGGATA+TGG | 0.394315 | 7_4:+42339708 | Msa1154730:CDS |
| AGATATGAAGAAACAAATAA+AGG | 0.395317 | 7_4:+42339172 | Msa1154730:CDS |
| TAGGTGAAACTGACAATTGC+TGG | 0.398898 | 7_4:+42335356 | Msa1154730:intron |
| ATTTCCGTCGTTTGATTTGT+CGG | 0.400918 | 7_4:+42339810 | Msa1154730:CDS |
| CAAATAGAAGCATCAAAATA+AGG | 0.401001 | 7_4:-42336713 | None:intergenic |
| GCAATCCGCAGTGAAGGATA+TGG | 0.401134 | 7_4:+42339645 | Msa1154730:CDS |
| TAGGATGTGAACTTGTTCTA+TGG | 0.402680 | 7_4:-42339788 | None:intergenic |
| AATGGATGCCCTCAAAATTC+CGG | 0.404099 | 7_4:+42338330 | Msa1154730:CDS |
| TTGCCAGCTGCCAACATGTA+TGG | 0.405673 | 7_4:-42337031 | None:intergenic |
| ATCGATGAATATCAGATTTG+AGG | 0.406810 | 7_4:-42334707 | None:intergenic |
| TGACAAGAGTCGAAGAAGTT+TGG | 0.407033 | 7_4:-42334540 | None:intergenic |
| CAGTCAGCCATAGATGCTTC+TGG | 0.409264 | 7_4:+42336313 | Msa1154730:CDS |
| AGTTCTGCCAGAAGCATCTA+TGG | 0.413120 | 7_4:-42336320 | None:intergenic |
| GTCCCAGTACAGGTTGAAAT+TGG | 0.413530 | 7_4:-42339079 | None:intergenic |
| TGAAAATAACAAGGCGTTTG+AGG | 0.414931 | 7_4:+42339453 | Msa1154730:CDS |
| GGCTTCAAATCTTGACAAAT+GGG | 0.418280 | 7_4:+42337084 | Msa1154730:CDS |
| TGGTGATGCTGTAAAGGTTA+TGG | 0.424741 | 7_4:+42336955 | Msa1154730:CDS |
| CTGTCCATTGACCAAAGAAA+TGG | 0.425063 | 7_4:+42337129 | Msa1154730:CDS |
| CCAATGAATGTGGTTTAGTC+GGG | 0.436283 | 7_4:+42338392 | Msa1154730:CDS |
| CCCGACTAAACCACATTCAT+TGG | 0.438880 | 7_4:-42338392 | None:intergenic |
| GATATGAAGAAACAAATAAA+GGG | 0.442156 | 7_4:+42339173 | Msa1154730:CDS |
| AATGCCATTGTTAGTTGTAA+TGG | 0.445328 | 7_4:-42334471 | None:intergenic |
| ATTGAAGGTAAATAAGAGAT+TGG | 0.447043 | 7_4:+42339390 | Msa1154730:CDS |
| CATATCTCCAAGAATATCAT+TGG | 0.447674 | 7_4:-42339156 | None:intergenic |
| GTTAGTTGTAATGGGAGGGG+AGG | 0.452204 | 7_4:-42334462 | None:intergenic |
| TAGCTCACAAGACATTTCAT+AGG | 0.452294 | 7_4:+42335726 | Msa1154730:CDS |
| GGACGGGAGGTTTGATGGAA+TGG | 0.454606 | 7_4:+42338926 | Msa1154730:CDS |
| TTGCTTTCATGTCCCAGTAC+AGG | 0.457106 | 7_4:-42339089 | None:intergenic |
| CCCCTTTCATCTTTAGTGCA+CGG | 0.458211 | 7_4:-42337001 | None:intergenic |
| CAAGCAGAACAATCCTCAAT+CGG | 0.458682 | 7_4:-42335655 | None:intergenic |
| TTACATCAAGCGGCACAATC+TGG | 0.459372 | 7_4:+42336935 | Msa1154730:CDS |
| CAAATCTTGACAAATGGGAT+TGG | 0.460930 | 7_4:+42337089 | Msa1154730:CDS |
| TTGTCCCCAGGCCTACTCTC+AGG | 0.461803 | 7_4:+42336834 | Msa1154730:CDS |
| TATGAAGAAACAAATATTGA+AGG | 0.463693 | 7_4:+42339375 | Msa1154730:CDS |
| TGCCAGCTGCCAACATGTAT+GGG | 0.467366 | 7_4:-42337030 | None:intergenic |
| TTAGTTGTAATGGGAGGGGA+GGG | 0.472414 | 7_4:-42334461 | None:intergenic |
| TCCTTCTTAATCCATTTCCT+AGG | 0.472652 | 7_4:-42338858 | None:intergenic |
| TAACAAGGCGTTTGAGGAGG+AGG | 0.472688 | 7_4:+42339459 | Msa1154730:CDS |
| TGATGAATTACAACAGGAAA+AGG | 0.474258 | 7_4:-42338425 | None:intergenic |
| AGGATTGTTCTGCTTGCATC+CGG | 0.474312 | 7_4:+42335662 | Msa1154730:CDS |
| GCTTCCCTGAGAGTAGGCCT+GGG | 0.475079 | 7_4:-42336839 | None:intergenic |
| GTAAAGGAGTTGAGTCTTGT+TGG | 0.475178 | 7_4:-42336916 | None:intergenic |
| AGCAGCTGACGACTGCTTGA+AGG | 0.476047 | 7_4:-42336752 | None:intergenic |
| GCCAATGAATGTGGTTTAGT+CGG | 0.476670 | 7_4:+42338391 | Msa1154730:CDS |
| GAAAATGAGTCTGGTAAATC+CGG | 0.482586 | 7_4:+42335482 | Msa1154730:CDS |
| TTCTCTAGCCTTCGCCAAAT+AGG | 0.482653 | 7_4:-42338637 | None:intergenic |
| CTCAATCGGGTGTTATCCCT+TGG | 0.483291 | 7_4:-42335641 | None:intergenic |
| GCGTTTGAGGAGGAGGTTGT+TGG | 0.483740 | 7_4:+42339466 | Msa1154730:CDS |
| AGCATGTGATGAATTACAAC+AGG | 0.483814 | 7_4:-42338431 | None:intergenic |
| TAGTTGTAATGGGAGGGGAG+GGG | 0.484633 | 7_4:-42334460 | None:intergenic |
| CTTAACGTGCAATACATGTA+AGG | 0.488119 | 7_4:+42334650 | Msa1154730:CDS |
| ATTTCTAACGCATTGTGGAT+TGG | 0.489031 | 7_4:-42336801 | None:intergenic |
| AGTGTTTCGAAGCGAGGAGA+AGG | 0.490676 | 7_4:-42334570 | None:intergenic |
| GATAACAGTGAAAATGAGTC+TGG | 0.491463 | 7_4:+42335473 | Msa1154730:CDS |
| GATTGTGCCGCTTGATGTAA+AGG | 0.492230 | 7_4:-42336932 | None:intergenic |
| CAAGGGGCAATCCGCAGAAA+AGG | 0.492268 | 7_4:+42339702 | Msa1154730:CDS |
| TGTGATGTGTCAAGTATATC+GGG | 0.492413 | 7_4:+42335437 | Msa1154730:CDS |
| TCCGTGCACTAAAGATGAAA+GGG | 0.494034 | 7_4:+42337000 | Msa1154730:CDS |
| TTGTTCTGCTTGCATCCGGC+AGG | 0.494543 | 7_4:+42335666 | Msa1154730:CDS |
| GAAAATTATGGATATGCTCA+AGG | 0.495106 | 7_4:+42339621 | Msa1154730:CDS |
| TTCGTGAACTGCTTACTGCT+TGG | 0.495769 | 7_4:+42336687 | Msa1154730:CDS |
| ATTTGTTTCTTCATATCTGA+GGG | 0.496807 | 7_4:-42339367 | None:intergenic |
| CAGGGCAAAGAGTTTCTGTC+TGG | 0.497474 | 7_4:+42335543 | Msa1154730:CDS |
| CATTGTGGATTGGTAAAACA+TGG | 0.500416 | 7_4:-42336791 | None:intergenic |
| TATTTGTTTCTTCATATCTG+AGG | 0.503652 | 7_4:-42339368 | None:intergenic |
| TTGAACTCCTCTTCATTTAG+CGG | 0.504328 | 7_4:-42338612 | None:intergenic |
| TGCGAAGGATATGGAAATTG+AGG | 0.504454 | 7_4:+42339528 | Msa1154730:CDS |
| AACGAAGGATATGGAAATTG+AGG | 0.505305 | 7_4:+42339591 | Msa1154730:CDS |
| ATCCGCAAGCTCAAGAGAAA+AGG | 0.505901 | 7_4:+42338723 | Msa1154730:CDS |
| CACATGATGCAGAAAGAGAA+AGG | 0.508909 | 7_4:+42338284 | Msa1154730:CDS |
| TCGCTCTGCTTTACTTGGGA+AGG | 0.512764 | 7_4:+42339046 | Msa1154730:CDS |
| GACTGATATAGCATCATTGT+GGG | 0.514669 | 7_4:+42338905 | Msa1154730:CDS |
| ACAATCTGGTGATGCTGTAA+AGG | 0.515510 | 7_4:+42336949 | Msa1154730:CDS |
| CAAGGGGCAATCGGCTGCGA+AGG | 0.516725 | 7_4:+42339513 | Msa1154730:CDS |
| CTCAACTCCTTTACATCAAG+CGG | 0.517214 | 7_4:+42336925 | Msa1154730:CDS |
| ACCCCATACATGTTGGCAGC+TGG | 0.521233 | 7_4:+42337028 | Msa1154730:CDS |
| AGAATCACAAGCTGCTATGA+AGG | 0.521983 | 7_4:+42337153 | Msa1154730:CDS |
| GGCATCCATTCTTCTTTCTG+TGG | 0.522288 | 7_4:-42338317 | None:intergenic |
| AGAAAAGGATATGGAAATTG+AGG | 0.523362 | 7_4:+42339717 | Msa1154730:CDS |
| ATTGTTAGTTGTAATGGGAG+GGG | 0.525723 | 7_4:-42334465 | None:intergenic |
| ATATAGCATCATTGTGGGAC+GGG | 0.528417 | 7_4:+42338910 | Msa1154730:CDS |
| GAAGGTAAATAAGAGATTGG+AGG | 0.529817 | 7_4:+42339393 | Msa1154730:CDS |
| CTTTGACAAAATCAGATGTC+CGG | 0.531523 | 7_4:-42335412 | None:intergenic |
| GCAATATTTCTAACGCATTG+TGG | 0.533539 | 7_4:-42336806 | None:intergenic |
| TTAATCCATTTCCTAGGTGA+AGG | 0.533602 | 7_4:-42338852 | None:intergenic |
| CGCAAGCTCAAGAGAAAAGG+TGG | 0.537712 | 7_4:+42338726 | Msa1154730:CDS |
| GCTATGAAGTCCGTGGTTGA+TGG | 0.538210 | 7_4:+42339841 | Msa1154730:CDS |
| AAAAGATGTGCAAGAGGTGA+AGG | 0.539732 | 7_4:+42338977 | Msa1154730:CDS |
| AGATACGCTCAAGGGGCAAT+CGG | 0.540035 | 7_4:+42339504 | Msa1154730:CDS |
| CATTGTTAGTTGTAATGGGA+GGG | 0.541964 | 7_4:-42334466 | None:intergenic |
| AGCAGAAGAAAAGAAGGCTC+AGG | 0.542170 | 7_4:+42337465 | Msa1154730:CDS |
| CTATTCGTCTGTCTTCAGAC+AGG | 0.544458 | 7_4:+42335524 | Msa1154730:CDS |
| GACCAATTTCAACCTGTACT+GGG | 0.545103 | 7_4:+42339077 | Msa1154730:CDS |
| CAAGAGTCGAAGAAGTTTGG+TGG | 0.545207 | 7_4:-42334537 | None:intergenic |
| ACCTAGGAAATGGATTAAGA+AGG | 0.546276 | 7_4:+42338857 | Msa1154730:CDS |
| AATTTCCATATCCTTCGTTG+TGG | 0.546296 | 7_4:-42339587 | None:intergenic |
| GGCAGAACTATACATTCTGC+TGG | 0.546994 | 7_4:+42336334 | Msa1154730:CDS |
| ACAGACTGCTCTGACTCAGT+TGG | 0.550586 | 7_4:+42339420 | Msa1154730:CDS |
| TGTTGTAATTCATCACATGC+TGG | 0.551145 | 7_4:+42338433 | Msa1154730:CDS |
| ACGTGAAGCAGAAGAAAAGA+AGG | 0.551389 | 7_4:+42337459 | Msa1154730:CDS |
| AGTGAAGGATATGGAAATTG+AGG | 0.553377 | 7_4:+42339654 | Msa1154730:CDS |
| GTCTGCTTCATAGGATACTA+GGG | 0.554726 | 7_4:-42336885 | None:intergenic |
| AAATCAAGAAAACTTTCAGA+AGG | 0.554976 | 7_4:+42337056 | Msa1154730:CDS |
| ATCCGTGCACTAAAGATGAA+AGG | 0.557723 | 7_4:+42336999 | Msa1154730:CDS |
| AGTCGTCAGCTGCTTTATGA+TGG | 0.557894 | 7_4:+42336761 | Msa1154730:CDS |
| GAAGTGGTTGTACTATTAGC+CGG | 0.558364 | 7_4:-42338349 | None:intergenic |
| AATATGATCAACGTGGTTTG+AGG | 0.558368 | 7_4:-42334601 | None:intergenic |
| CTTTCAGAGGCCAATGAATG+TGG | 0.559670 | 7_4:+42338382 | Msa1154730:CDS |
| CACATTCATTGGCCTCTGAA+AGG | 0.559741 | 7_4:-42338381 | None:intergenic |
| AAGCAGAACAATCCTCAATC+GGG | 0.560153 | 7_4:-42335654 | None:intergenic |
| TCATATCTGAGGGGTAACCT+TGG | 0.561169 | 7_4:-42339357 | None:intergenic |
| AGAGGTGAAGGAGTCTGGGT+TGG | 0.561982 | 7_4:+42338989 | Msa1154730:CDS |
| GTGTTTCGAAGCGAGGAGAA+GGG | 0.562329 | 7_4:-42334569 | None:intergenic |
| ATATGATCAACGTGGTTTGA+GGG | 0.562683 | 7_4:-42334600 | None:intergenic |
| TGGTTGCATTCAGTTCGTCT+CGG | 0.562913 | 7_4:-42339115 | None:intergenic |
| TGTCCCCAGGCCTACTCTCA+GGG | 0.564651 | 7_4:+42336835 | Msa1154730:CDS |
| ACCTTCGCTCTGCTTTACTT+GGG | 0.564658 | 7_4:+42339042 | Msa1154730:CDS |
| TGAAAGGCTATTAGCTGAAG+TGG | 0.565476 | 7_4:-42338365 | None:intergenic |
| GGAGAAGTCTTGTGTCCCAA+TGG | 0.565497 | 7_4:+42338878 | Msa1154730:CDS |
| TATGCTGTGAGGGCCAAGGC+CGG | 0.569657 | 7_4:+42336283 | Msa1154730:CDS |
| AATGTCTCCGCTAAATGAAG+AGG | 0.571142 | 7_4:+42338605 | Msa1154730:CDS |
| GAAAAGTATAGATACGCTCA+AGG | 0.571373 | 7_4:+42339684 | Msa1154730:CDS |
| GAAGCAAAATTGGACGTTAG+TGG | 0.573636 | 7_4:+42338693 | Msa1154730:CDS |
| TGCAAGAGGTGAAGGAGTCT+GGG | 0.575522 | 7_4:+42338985 | Msa1154730:CDS |
| CAGATATGCTGTGAGGGCCA+AGG | 0.576082 | 7_4:+42336279 | Msa1154730:intron |
| AAAATTATGGATATGCTCAA+GGG | 0.577803 | 7_4:+42339622 | Msa1154730:CDS |
| CAAGGGGCAATCCGCAGTGA+AGG | 0.579960 | 7_4:+42339639 | Msa1154730:CDS |
| GAAAAGTGTAGATACGCTCA+AGG | 0.583889 | 7_4:+42339495 | Msa1154730:CDS |
| CAACTTTACCAGTTGCGCCA+AGG | 0.585916 | 7_4:+42339340 | Msa1154730:intron |
| AGCTGCCACAGAAAGAAGAA+TGG | 0.586100 | 7_4:+42338312 | Msa1154730:CDS |
| CCATTGTTAGTTGTAATGGG+AGG | 0.589197 | 7_4:-42334467 | None:intergenic |
| GGCTGCATGCGGTTCTAAGG+TGG | 0.589865 | 7_4:+42338824 | Msa1154730:CDS |
| GCAGCCGCTATGTTATTCAA+AGG | 0.590017 | 7_4:-42338807 | None:intergenic |
| AGGTGAAACTGACAATTGCT+GGG | 0.590156 | 7_4:+42335357 | Msa1154730:intron |
| GGTTGAAGTGTTTCGAAGCG+AGG | 0.590259 | 7_4:-42334576 | None:intergenic |
| GCCAGCTGCCAACATGTATG+GGG | 0.592155 | 7_4:-42337029 | None:intergenic |
| ATCTGTGACTGTTGAGCCAA+GGG | 0.593506 | 7_4:+42335625 | Msa1154730:CDS |
| AGACTGATATAGCATCATTG+TGG | 0.595329 | 7_4:+42338904 | Msa1154730:CDS |
| GTTCAAGACCTATTTGGCGA+AGG | 0.598442 | 7_4:+42338629 | Msa1154730:CDS |
| CTTATGCAGATATGCTGTGA+GGG | 0.598581 | 7_4:+42336273 | Msa1154730:intron |
| AAAAGTATAGATACGCTCAA+GGG | 0.604119 | 7_4:+42339685 | Msa1154730:CDS |
| TTCAGCTAATAGCCTTTCAG+AGG | 0.604540 | 7_4:+42338369 | Msa1154730:CDS |
| CTTCCCTGAGAGTAGGCCTG+GGG | 0.608612 | 7_4:-42336838 | None:intergenic |
| CTTCACAAAAGATGTGCAAG+AGG | 0.608648 | 7_4:+42338971 | Msa1154730:CDS |
| ACAACCAGCAAAGTGCCTGC+CGG | 0.610122 | 7_4:-42335681 | None:intergenic |
| AAAAGTGTAGATACGCTCAA+GGG | 0.612472 | 7_4:+42339496 | Msa1154730:CDS |
| GAAACAAATAAAGGGCAACC+CGG | 0.613009 | 7_4:+42339181 | Msa1154730:CDS |
| CAAGGGATAACACCCGATTG+AGG | 0.614095 | 7_4:+42335642 | Msa1154730:CDS |
| TAAAAGCATAGATATGCTCA+AGG | 0.617293 | 7_4:+42339558 | Msa1154730:CDS |
| TAGCATCATTGTGGGACGGG+AGG | 0.618527 | 7_4:+42338913 | Msa1154730:CDS |
| GATATAGCATCATTGTGGGA+CGG | 0.618688 | 7_4:+42338909 | Msa1154730:CDS |
| CAAGCTCAAGAGAAAAGGTG+GGG | 0.619925 | 7_4:+42338728 | Msa1154730:CDS |
| AAAGTATAGATACGCTCAAG+GGG | 0.633488 | 7_4:+42339686 | Msa1154730:CDS |
| AAATTATGGATATGCTCAAG+GGG | 0.636169 | 7_4:+42339623 | Msa1154730:CDS |
| TAAGCTAGAACCCGAAACAA+CGG | 0.636405 | 7_4:-42334631 | None:intergenic |
| GGGACGAACCCCATACATGT+TGG | 0.637688 | 7_4:+42337021 | Msa1154730:CDS |
| CCTCCCATTACAACTAACAA+TGG | 0.639592 | 7_4:+42334467 | Msa1154730:exon |
| ATAGGATACTAGGGTCAACT+GGG | 0.643353 | 7_4:-42336876 | None:intergenic |
| TCCCAAGTAAAGCAGAGCGA+AGG | 0.644285 | 7_4:-42339043 | None:intergenic |
| TCCGTCGTTTGATTTGTCGG+AGG | 0.644378 | 7_4:+42339813 | Msa1154730:CDS |
| GGCTGACGCTATGAAGTCCG+TGG | 0.644824 | 7_4:+42339834 | Msa1154730:CDS |
| TATTCGTCTGTCTTCAGACA+GGG | 0.646496 | 7_4:+42335525 | Msa1154730:CDS |
| ATATTGCTATGATTGTCCCC+AGG | 0.650763 | 7_4:+42336822 | Msa1154730:CDS |
| CAATGAATGTGGTTTAGTCG+GGG | 0.653073 | 7_4:+42338393 | Msa1154730:CDS |
| GCAAGCTCAAGAGAAAAGGT+GGG | 0.656480 | 7_4:+42338727 | Msa1154730:CDS |
| AATAACATAGCGGCTGCATG+CGG | 0.657907 | 7_4:+42338813 | Msa1154730:CDS |
| AAAGTGTAGATACGCTCAAG+GGG | 0.663205 | 7_4:+42339497 | Msa1154730:CDS |
| AGGTGGTTCTTCCTTCACCT+AGG | 0.663668 | 7_4:+42338841 | Msa1154730:CDS |
| AAATAACAAGGCGTTTGAGG+AGG | 0.669156 | 7_4:+42339456 | Msa1154730:CDS |
| AATCTGTGACTGTTGAGCCA+AGG | 0.669269 | 7_4:+42335624 | Msa1154730:CDS |
| AAGCTCAAGAGAAAAGGTGG+GGG | 0.678103 | 7_4:+42338729 | Msa1154730:CDS |
| CCGTGCACTAAAGATGAAAG+GGG | 0.684903 | 7_4:+42337001 | Msa1154730:CDS |
| TGTTGTGCAATGATGTTCAG+AGG | 0.686426 | 7_4:+42335597 | Msa1154730:CDS |
| TGATCAACGTGGTTTGAGGG+TGG | 0.689448 | 7_4:-42334597 | None:intergenic |
| TTTGTTTCTTCATATCTGAG+GGG | 0.692675 | 7_4:-42339366 | None:intergenic |
| CAAGGTGCAATCCACAACGA+AGG | 0.693173 | 7_4:+42339576 | Msa1154730:CDS |
| GATTCTGTGTCTGAAAGTGA+CGG | 0.703065 | 7_4:-42338771 | None:intergenic |
| GCCTCCGACAAATCAAACGA+CGG | 0.707717 | 7_4:-42339814 | None:intergenic |
| TCTTATGCAGATATGCTGTG+AGG | 0.709561 | 7_4:+42336272 | Msa1154730:intron |
| AAAAGCTAGTGAGATGCTTG+TGG | 0.710178 | 7_4:+42339013 | Msa1154730:CDS |
| AATTTCCATATCCTTCACTG+CGG | 0.750466 | 7_4:-42339650 | None:intergenic |
| ACAACCTTTGAATAACATAG+CGG | 0.758788 | 7_4:+42338803 | Msa1154730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAATGATTTATGTT+TGG | + | chr7_4:42335134-42335153 | Msa1154730:intron | 10.0% |
| !! | ATAAAAATGAATAAGAAAAT+AGG | - | chr7_4:42336190-42336209 | None:intergenic | 10.0% |
| !!! | TTTTATCTAAAAAAATAAAC+AGG | + | chr7_4:42338246-42338265 | Msa1154730:intron | 10.0% |
| !!! | TTTTATTCAAGCTTTTTTAT+TGG | + | chr7_4:42334806-42334825 | Msa1154730:intron | 15.0% |
| !!! | TTTATTCAAGCTTTTTTATT+GGG | + | chr7_4:42334807-42334826 | Msa1154730:intron | 15.0% |
| !! | GTAAAATAATTGTATATTGA+CGG | + | chr7_4:42335092-42335111 | Msa1154730:intron | 15.0% |
| !!! | TCGTTACTAAATATTTTAAA+AGG | + | chr7_4:42335763-42335782 | Msa1154730:intron | 15.0% |
| !! | GAGATTTATACAATAAAATA+TGG | + | chr7_4:42335810-42335829 | Msa1154730:intron | 15.0% |
| !! | ATTTACTGAAAAATTGTAAA+CGG | + | chr7_4:42336223-42336242 | Msa1154730:intron | 15.0% |
| !! | ATCAATTTAGTAATGATAAT+TGG | + | chr7_4:42336512-42336531 | Msa1154730:intron | 15.0% |
| !!! | TGTTTTATATTTTAATCTTC+TGG | + | chr7_4:42338216-42338235 | Msa1154730:intron | 15.0% |
| !! | ACATTACTAAATTGATCTTA+TGG | + | chr7_4:42335860-42335879 | Msa1154730:intron | 20.0% |
| !! | CATTACTAAATTGATCTTAT+GGG | + | chr7_4:42335861-42335880 | Msa1154730:intron | 20.0% |
| !!! | TAATAAACCTTTTTAAATGC+AGG | - | chr7_4:42336385-42336404 | None:intergenic | 20.0% |
| !! | ATCATTACTAAATTGATCTT+AGG | - | chr7_4:42336509-42336528 | None:intergenic | 20.0% |
| !! | GTCAAAAATTATGATCAATA+GGG | - | chr7_4:42336538-42336557 | None:intergenic | 20.0% |
| !! | TGTCAAAAATTATGATCAAT+AGG | - | chr7_4:42336539-42336558 | None:intergenic | 20.0% |
| !! | AGAACATTAGTAAGTAAAAT+TGG | - | chr7_4:42336584-42336603 | None:intergenic | 20.0% |
| !! | TTTATGATAGATATTACCAT+AGG | + | chr7_4:42337551-42337570 | Msa1154730:intron | 20.0% |
| !! | ATACAGTGAAAACAAATAAA+TGG | - | chr7_4:42337998-42338017 | None:intergenic | 20.0% |
| !!! | AATCAATTCTGTTTTATTGT+TGG | - | chr7_4:42338162-42338181 | None:intergenic | 20.0% |
| !! | TATCTAAAAAAATAAACAGG+AGG | + | chr7_4:42338249-42338268 | Msa1154730:intron | 20.0% |
| !! | AAGAATTACAGAGAAATTAT+GGG | - | chr7_4:42338555-42338574 | None:intergenic | 20.0% |
| !! | AAAGAATTACAGAGAAATTA+TGG | - | chr7_4:42338556-42338575 | None:intergenic | 20.0% |
| !! | AGATATGAAGAAACAAATAA+AGG | + | chr7_4:42339172-42339191 | Msa1154730:CDS | 20.0% |
| !! | GATATGAAGAAACAAATAAA+GGG | + | chr7_4:42339173-42339192 | Msa1154730:CDS | 20.0% |
| !! | TATGAAGAAACAAATATTGA+AGG | + | chr7_4:42339375-42339394 | Msa1154730:CDS | 20.0% |
| ! | CAAGTTAGAATAAATTCTAG+AGG | + | chr7_4:42335245-42335264 | Msa1154730:intron | 25.0% |
| ! | TTATCAAGAACAATGTAAGA+AGG | - | chr7_4:42335322-42335341 | None:intergenic | 25.0% |
| ! | GATAAACTTATGTTGATCAT+AGG | + | chr7_4:42335337-42335356 | Msa1154730:intron | 25.0% |
| ! | TAAATTTCACAATGAGAATG+AGG | + | chr7_4:42336004-42336023 | Msa1154730:intron | 25.0% |
| ! | AAATTTCACAATGAGAATGA+GGG | + | chr7_4:42336005-42336024 | Msa1154730:intron | 25.0% |
| ! | AGGTATGTATGATATGATAT+AGG | - | chr7_4:42336143-42336162 | None:intergenic | 25.0% |
| ! | AAAATAGGAAGATAGGTATT+TGG | - | chr7_4:42336175-42336194 | None:intergenic | 25.0% |
| ! | GAATAAGAAAATAGGAAGAT+AGG | - | chr7_4:42336182-42336201 | None:intergenic | 25.0% |
| ! | TATAAATCTGAACTGACTAT+TGG | + | chr7_4:42336644-42336663 | Msa1154730:intron | 25.0% |
| !!! | CAAATAGAAGCATCAAAATA+AGG | - | chr7_4:42336716-42336735 | None:intergenic | 25.0% |
| ! | AAATCAAGAAAACTTTCAGA+AGG | + | chr7_4:42337056-42337075 | Msa1154730:CDS | 25.0% |
| ! | TAAATGTATTTGGCAGTAAA+AGG | + | chr7_4:42337283-42337302 | Msa1154730:intron | 25.0% |
| ! | AAATGTATTTGGCAGTAAAA+GGG | + | chr7_4:42337284-42337303 | Msa1154730:intron | 25.0% |
| !! | ACACTATATTAGAGTCTTAT+TGG | + | chr7_4:42337857-42337876 | Msa1154730:intron | 25.0% |
| ! | TGCAGTATTTGTAATTAAAC+CGG | - | chr7_4:42338474-42338493 | None:intergenic | 25.0% |
| !!! | GGCTATTTTCAATTTTTCTT+TGG | - | chr7_4:42339138-42339157 | None:intergenic | 25.0% |
| ! | AAAATAGCCAATGATATTCT+TGG | + | chr7_4:42339149-42339168 | Msa1154730:CDS | 25.0% |
| !! | ATTTGTTTCTTCATATCTGA+GGG | - | chr7_4:42339370-42339389 | None:intergenic | 25.0% |
| !! | TATTTGTTTCTTCATATCTG+AGG | - | chr7_4:42339371-42339390 | None:intergenic | 25.0% |
| ! | ATTGAAGGTAAATAAGAGAT+TGG | + | chr7_4:42339390-42339409 | Msa1154730:CDS | 25.0% |
| ! | GAAAAAGACTGAAAATAACA+AGG | + | chr7_4:42339444-42339463 | Msa1154730:CDS | 25.0% |
| ! | TGAGGATTTGAAGAAAATTA+TGG | + | chr7_4:42339609-42339628 | Msa1154730:CDS | 25.0% |
| ! | AAAATTATGGATATGCTCAA+GGG | + | chr7_4:42339622-42339641 | Msa1154730:CDS | 25.0% |
| ATGCCATTGTTAGTTGTAAT+GGG | - | chr7_4:42334473-42334492 | None:intergenic | 30.0% | |
| AATGCCATTGTTAGTTGTAA+TGG | - | chr7_4:42334474-42334493 | None:intergenic | 30.0% | |
| ATCGATGAATATCAGATTTG+AGG | - | chr7_4:42334710-42334729 | None:intergenic | 30.0% | |
| TACAAGATGAACATAGTGAA+GGG | - | chr7_4:42334753-42334772 | None:intergenic | 30.0% | |
| TTACAAGATGAACATAGTGA+AGG | - | chr7_4:42334754-42334773 | None:intergenic | 30.0% | |
| !! | AAAACAGATTTTGGTATGCT+TGG | - | chr7_4:42335296-42335315 | None:intergenic | 30.0% |
| ! | AGAAGGCTTAAAACAGATTT+TGG | - | chr7_4:42335305-42335324 | None:intergenic | 30.0% |
| !! | CTTTTGTTTAAAGCTTTCAC+CGG | - | chr7_4:42335504-42335523 | None:intergenic | 30.0% |
| TAGGTATTTGGTCAATTATG+AGG | - | chr7_4:42336163-42336182 | None:intergenic | 30.0% | |
| !! | TCTTAGGAGTTCTAAAGTAT+TGG | - | chr7_4:42336493-42336512 | None:intergenic | 30.0% |
| ! | TGTAAAGGTTATGGAACTTT+TGG | + | chr7_4:42336964-42336983 | Msa1154730:CDS | 30.0% |
| GAAAACTTTCAGAAGGTTTA+TGG | + | chr7_4:42337063-42337082 | Msa1154730:CDS | 30.0% | |
| TTGTGATTCTTCCATTTCTT+TGG | - | chr7_4:42337143-42337162 | None:intergenic | 30.0% | |
| AAGGTGATTCTGATATATCT+AGG | + | chr7_4:42337172-42337191 | Msa1154730:intron | 30.0% | |
| !! | GACTTGCTGATAAATGTATT+TGG | + | chr7_4:42337273-42337292 | Msa1154730:intron | 30.0% |
| TTCGATTTCTATGTAGTATG+AGG | + | chr7_4:42337502-42337521 | Msa1154730:intron | 30.0% | |
| TATTACCATAGGTTGTCAAA+AGG | + | chr7_4:42337562-42337581 | Msa1154730:intron | 30.0% | |
| ! | CTTAGTAACTTCCCTTTTAA+GGG | - | chr7_4:42337733-42337752 | None:intergenic | 30.0% |
| ! | ACTTAGTAACTTCCCTTTTA+AGG | - | chr7_4:42337734-42337753 | None:intergenic | 30.0% |
| !! | CATTTTGGTCACACTAAAAA+GGG | - | chr7_4:42337836-42337855 | None:intergenic | 30.0% |
| ! | CTCTAATATAGTGTGCATTT+TGG | - | chr7_4:42337851-42337870 | None:intergenic | 30.0% |
| !! | TATCAACAGATCTTTAGAAC+TGG | + | chr7_4:42338015-42338034 | Msa1154730:intron | 30.0% |
| ACAGAAGATAAATTGCAGAA+TGG | - | chr7_4:42338111-42338130 | None:intergenic | 30.0% | |
| TGATGAATTACAACAGGAAA+AGG | - | chr7_4:42338428-42338447 | None:intergenic | 30.0% | |
| AGTATTTGTAATTAAACCGG+TGG | - | chr7_4:42338471-42338490 | None:intergenic | 30.0% | |
| !! | CATGTTGTTACTTGTTATGT+AGG | + | chr7_4:42338579-42338598 | Msa1154730:intron | 30.0% |
| !! | AGAGACATAGTTTTGCAATT+TGG | + | chr7_4:42338663-42338682 | Msa1154730:CDS | 30.0% |
| ACAACCTTTGAATAACATAG+CGG | + | chr7_4:42338803-42338822 | Msa1154730:CDS | 30.0% | |
| ! | CTATATCAGTCTTTTCCATT+GGG | - | chr7_4:42338896-42338915 | None:intergenic | 30.0% |
| CATATCTCCAAGAATATCAT+TGG | - | chr7_4:42339159-42339178 | None:intergenic | 30.0% | |
| ! | TTTGTTTCTTCATATCTGAG+GGG | - | chr7_4:42339369-42339388 | None:intergenic | 30.0% |
| ! | TAAAAGCATAGATATGCTCA+AGG | + | chr7_4:42339558-42339577 | Msa1154730:CDS | 30.0% |
| GAAAATTATGGATATGCTCA+AGG | + | chr7_4:42339621-42339640 | Msa1154730:CDS | 30.0% | |
| AAATTATGGATATGCTCAAG+GGG | + | chr7_4:42339623-42339642 | Msa1154730:CDS | 30.0% | |
| ! | AAAAGTATAGATACGCTCAA+GGG | + | chr7_4:42339685-42339704 | Msa1154730:CDS | 30.0% |
| ! | AATTTCCATATCCTTTTCTG+CGG | - | chr7_4:42339716-42339735 | None:intergenic | 30.0% |
| AGAAAAGGATATGGAAATTG+AGG | + | chr7_4:42339717-42339736 | Msa1154730:CDS | 30.0% | |
| !!! | TATTAGTTTTCCATCAACCA+CGG | - | chr7_4:42339854-42339873 | None:intergenic | 30.0% |
| ! | ATTGTTAGTTGTAATGGGAG+GGG | - | chr7_4:42334468-42334487 | None:intergenic | 35.0% |
| ! | CATTGTTAGTTGTAATGGGA+GGG | - | chr7_4:42334469-42334488 | None:intergenic | 35.0% |
| ATATGATCAACGTGGTTTGA+GGG | - | chr7_4:42334603-42334622 | None:intergenic | 35.0% | |
| AATATGATCAACGTGGTTTG+AGG | - | chr7_4:42334604-42334623 | None:intergenic | 35.0% | |
| !! | CGTTTTGAATATGATCAACG+TGG | - | chr7_4:42334611-42334630 | None:intergenic | 35.0% |
| TATTCAAAACGCCGTTGTTT+CGG | + | chr7_4:42334620-42334639 | Msa1154730:CDS | 35.0% | |
| CTTAACGTGCAATACATGTA+AGG | + | chr7_4:42334650-42334669 | Msa1154730:CDS | 35.0% | |
| ACATGATTCACAATTCACGT+TGG | + | chr7_4:42334859-42334878 | Msa1154730:intron | 35.0% | |
| ! | GTACTGAATTTTTCTCGTGT+TGG | - | chr7_4:42334896-42334915 | None:intergenic | 35.0% |
| GAGAAAAATTCAGTACGCAT+GGG | + | chr7_4:42334900-42334919 | Msa1154730:intron | 35.0% | |
| AGTACTAAAGCAAACGTGTA+TGG | - | chr7_4:42334936-42334955 | None:intergenic | 35.0% | |
| ATGACGTAACAACTCATCAT+TGG | - | chr7_4:42334996-42335015 | None:intergenic | 35.0% | |
| TTGACGTGACAATACATCAT+TGG | + | chr7_4:42335061-42335080 | Msa1154730:intron | 35.0% | |
| AGCATAAAAATCACCACGTT+TGG | + | chr7_4:42335194-42335213 | Msa1154730:intron | 35.0% | |
| ATAAAAATCACCACGTTTGG+AGG | + | chr7_4:42335197-42335216 | Msa1154730:intron | 35.0% | |
| ! | AAACCTGTTCTAAATGAGGA+CGG | + | chr7_4:42335270-42335289 | Msa1154730:intron | 35.0% |
| GAAAAATACTGTGAAGGAAG+AGG | + | chr7_4:42335379-42335398 | Msa1154730:CDS | 35.0% | |
| CTTTGACAAAATCAGATGTC+CGG | - | chr7_4:42335415-42335434 | None:intergenic | 35.0% | |
| CTGTGATGTGTCAAGTATAT+CGG | + | chr7_4:42335436-42335455 | Msa1154730:CDS | 35.0% | |
| TGTGATGTGTCAAGTATATC+GGG | + | chr7_4:42335437-42335456 | Msa1154730:CDS | 35.0% | |
| GATAACAGTGAAAATGAGTC+TGG | + | chr7_4:42335473-42335492 | Msa1154730:CDS | 35.0% | |
| GAAAATGAGTCTGGTAAATC+CGG | + | chr7_4:42335482-42335501 | Msa1154730:CDS | 35.0% | |
| TAGCTCACAAGACATTTCAT+AGG | + | chr7_4:42335726-42335745 | Msa1154730:CDS | 35.0% | |
| AGTTTCTCCAGATAGTTGTT+TGG | + | chr7_4:42336059-42336078 | Msa1154730:intron | 35.0% | |
| AGAAAAGCCAAACAACTATC+TGG | - | chr7_4:42336069-42336088 | None:intergenic | 35.0% | |
| !!! | TATGGCTGACTGTTTTTTTC+CGG | - | chr7_4:42336305-42336324 | None:intergenic | 35.0% |
| CAACGAACCTGCATTTAAAA+AGG | + | chr7_4:42336375-42336394 | Msa1154730:CDS | 35.0% | |
| TATTGGCATGCTCATATTGT+AGG | + | chr7_4:42336661-42336680 | Msa1154730:intron | 35.0% | |
| !! | CATTGTGGATTGGTAAAACA+TGG | - | chr7_4:42336794-42336813 | None:intergenic | 35.0% |
| ATTTCTAACGCATTGTGGAT+TGG | - | chr7_4:42336804-42336823 | None:intergenic | 35.0% | |
| ! | GCAATATTTCTAACGCATTG+TGG | - | chr7_4:42336809-42336828 | None:intergenic | 35.0% |
| !!! | GTTATGGAACTTTTGGAACA+GGG | + | chr7_4:42336971-42336990 | Msa1154730:CDS | 35.0% |
| TGGCTTCAAATCTTGACAAA+TGG | + | chr7_4:42337083-42337102 | Msa1154730:CDS | 35.0% | |
| GGCTTCAAATCTTGACAAAT+GGG | + | chr7_4:42337084-42337103 | Msa1154730:CDS | 35.0% | |
| CAAATCTTGACAAATGGGAT+TGG | + | chr7_4:42337089-42337108 | Msa1154730:CDS | 35.0% | |
| TCTTCCATTTCTTTGGTCAA+TGG | - | chr7_4:42337136-42337155 | None:intergenic | 35.0% | |
| AGCTAGAGCAAAAGAATTAG+AGG | + | chr7_4:42337432-42337451 | Msa1154730:CDS | 35.0% | |
| AACCCTAAATGACCCTTAAA+AGG | + | chr7_4:42337718-42337737 | Msa1154730:intron | 35.0% | |
| ACCCTAAATGACCCTTAAAA+GGG | + | chr7_4:42337719-42337738 | Msa1154730:intron | 35.0% | |
| !! | TCCCTTTTAAGGGTCATTTA+GGG | - | chr7_4:42337723-42337742 | None:intergenic | 35.0% |
| !! | TTCCCTTTTAAGGGTCATTT+AGG | - | chr7_4:42337724-42337743 | None:intergenic | 35.0% |
| !! | GCATTTTGGTCACACTAAAA+AGG | - | chr7_4:42337837-42337856 | None:intergenic | 35.0% |
| ! | ACTATTAGCCGGAATTTTGA+GGG | - | chr7_4:42338341-42338360 | None:intergenic | 35.0% |
| ! | TACTATTAGCCGGAATTTTG+AGG | - | chr7_4:42338342-42338361 | None:intergenic | 35.0% |
| AGCATGTGATGAATTACAAC+AGG | - | chr7_4:42338434-42338453 | None:intergenic | 35.0% | |
| TGTTGTAATTCATCACATGC+TGG | + | chr7_4:42338433-42338452 | Msa1154730:CDS | 35.0% | |
| TTGTAATTAAACCGGTGGAA+AGG | - | chr7_4:42338466-42338485 | None:intergenic | 35.0% | |
| TACATTGTCATCCATCTTCT+AGG | - | chr7_4:42338528-42338547 | None:intergenic | 35.0% | |
| TTGAACTCCTCTTCATTTAG+CGG | - | chr7_4:42338615-42338634 | None:intergenic | 35.0% | |
| TTAATCCATTTCCTAGGTGA+AGG | - | chr7_4:42338855-42338874 | None:intergenic | 35.0% | |
| !! | ACCTAGGAAATGGATTAAGA+AGG | + | chr7_4:42338857-42338876 | Msa1154730:CDS | 35.0% |
| TCCTTCTTAATCCATTTCCT+AGG | - | chr7_4:42338861-42338880 | None:intergenic | 35.0% | |
| ! | GCTATATCAGTCTTTTCCAT+TGG | - | chr7_4:42338897-42338916 | None:intergenic | 35.0% |
| AGACTGATATAGCATCATTG+TGG | + | chr7_4:42338904-42338923 | Msa1154730:CDS | 35.0% | |
| GACTGATATAGCATCATTGT+GGG | + | chr7_4:42338905-42338924 | Msa1154730:CDS | 35.0% | |
| !! | GTTTGATGGAATGGATTTTG+TGG | + | chr7_4:42338935-42338954 | Msa1154730:CDS | 35.0% |
| TTTACTTGGGAAGGTGATTA+TGG | + | chr7_4:42339055-42339074 | Msa1154730:CDS | 35.0% | |
| TAAAGTTGTTGTCATGTGAC+TGG | - | chr7_4:42339328-42339347 | None:intergenic | 35.0% | |
| GAAGGTAAATAAGAGATTGG+AGG | + | chr7_4:42339393-42339412 | Msa1154730:CDS | 35.0% | |
| ! | TGAAAATAACAAGGCGTTTG+AGG | + | chr7_4:42339453-42339472 | Msa1154730:CDS | 35.0% |
| ! | AAAAGTGTAGATACGCTCAA+GGG | + | chr7_4:42339496-42339515 | Msa1154730:CDS | 35.0% |
| AATTTCCATATCCTTCGTTG+TGG | - | chr7_4:42339590-42339609 | None:intergenic | 35.0% | |
| AACGAAGGATATGGAAATTG+AGG | + | chr7_4:42339591-42339610 | Msa1154730:CDS | 35.0% | |
| AATTTCCATATCCTTCACTG+CGG | - | chr7_4:42339653-42339672 | None:intergenic | 35.0% | |
| AGTGAAGGATATGGAAATTG+AGG | + | chr7_4:42339654-42339673 | Msa1154730:CDS | 35.0% | |
| ! | GAAAAGTATAGATACGCTCA+AGG | + | chr7_4:42339684-42339703 | Msa1154730:CDS | 35.0% |
| AAAGTATAGATACGCTCAAG+GGG | + | chr7_4:42339686-42339705 | Msa1154730:CDS | 35.0% | |
| !!! | TTATCAAGGTGGTTTTGACA+AGG | + | chr7_4:42339765-42339784 | Msa1154730:CDS | 35.0% |
| ! | TAGGATGTGAACTTGTTCTA+TGG | - | chr7_4:42339791-42339810 | None:intergenic | 35.0% |
| ACAAATCAAACGACGGAAAT+AGG | - | chr7_4:42339810-42339829 | None:intergenic | 35.0% | |
| !! | ATTTCCGTCGTTTGATTTGT+CGG | + | chr7_4:42339810-42339829 | Msa1154730:CDS | 35.0% |
| ! | CCATTGTTAGTTGTAATGGG+AGG | - | chr7_4:42334470-42334489 | None:intergenic | 40.0% |
| CCTCCCATTACAACTAACAA+TGG | + | chr7_4:42334467-42334486 | Msa1154730:exon | 40.0% | |
| TGACAAGAGTCGAAGAAGTT+TGG | - | chr7_4:42334543-42334562 | None:intergenic | 40.0% | |
| ! | ATTCAAAACGCCGTTGTTTC+GGG | + | chr7_4:42334621-42334640 | Msa1154730:CDS | 40.0% |
| TAAGCTAGAACCCGAAACAA+CGG | - | chr7_4:42334634-42334653 | None:intergenic | 40.0% | |
| CGAGAAAAATTCAGTACGCA+TGG | + | chr7_4:42334899-42334918 | Msa1154730:intron | 40.0% | |
| AACAACTCATCATTGGATGC+AGG | - | chr7_4:42334989-42335008 | None:intergenic | 40.0% | |
| !! | TTAGCTTTTTCCTCCAAACG+TGG | - | chr7_4:42335210-42335229 | None:intergenic | 40.0% |
| ! | GGCAAAACCTGTTCTAAATG+AGG | + | chr7_4:42335266-42335285 | Msa1154730:intron | 40.0% |
| TAGGTGAAACTGACAATTGC+TGG | + | chr7_4:42335356-42335375 | Msa1154730:intron | 40.0% | |
| AGGTGAAACTGACAATTGCT+GGG | + | chr7_4:42335357-42335376 | Msa1154730:intron | 40.0% | |
| TGCTGGGAAAAATACTGTGA+AGG | + | chr7_4:42335373-42335392 | Msa1154730:CDS | 40.0% | |
| ! | TGTGAAGGAAGAGGATTTTG+AGG | + | chr7_4:42335388-42335407 | Msa1154730:CDS | 40.0% |
| TATTCGTCTGTCTTCAGACA+GGG | + | chr7_4:42335525-42335544 | Msa1154730:CDS | 40.0% | |
| TGTTGTGCAATGATGTTCAG+AGG | + | chr7_4:42335597-42335616 | Msa1154730:CDS | 40.0% | |
| AAGCAGAACAATCCTCAATC+GGG | - | chr7_4:42335657-42335676 | None:intergenic | 40.0% | |
| CAAGCAGAACAATCCTCAAT+CGG | - | chr7_4:42335658-42335677 | None:intergenic | 40.0% | |
| ! | TTTGCTGGTTGTGTCTTTGA+TGG | + | chr7_4:42335692-42335711 | Msa1154730:CDS | 40.0% |
| TCTTATGCAGATATGCTGTG+AGG | + | chr7_4:42336272-42336291 | Msa1154730:intron | 40.0% | |
| CTTATGCAGATATGCTGTGA+GGG | + | chr7_4:42336273-42336292 | Msa1154730:intron | 40.0% | |
| ATATTGCTATGATTGTCCCC+AGG | + | chr7_4:42336822-42336841 | Msa1154730:CDS | 40.0% | |
| ATAGGATACTAGGGTCAACT+GGG | - | chr7_4:42336879-42336898 | None:intergenic | 40.0% | |
| GTCTGCTTCATAGGATACTA+GGG | - | chr7_4:42336888-42336907 | None:intergenic | 40.0% | |
| ! | GTAAAGGAGTTGAGTCTTGT+TGG | - | chr7_4:42336919-42336938 | None:intergenic | 40.0% |
| CTCAACTCCTTTACATCAAG+CGG | + | chr7_4:42336925-42336944 | Msa1154730:CDS | 40.0% | |
| ! | ACAATCTGGTGATGCTGTAA+AGG | + | chr7_4:42336949-42336968 | Msa1154730:CDS | 40.0% |
| ! | TGGTGATGCTGTAAAGGTTA+TGG | + | chr7_4:42336955-42336974 | Msa1154730:CDS | 40.0% |
| !!! | GGTTATGGAACTTTTGGAAC+AGG | + | chr7_4:42336970-42336989 | Msa1154730:CDS | 40.0% |
| ATCCGTGCACTAAAGATGAA+AGG | + | chr7_4:42336999-42337018 | Msa1154730:CDS | 40.0% | |
| TCCGTGCACTAAAGATGAAA+GGG | + | chr7_4:42337000-42337019 | Msa1154730:CDS | 40.0% | |
| CTGTCCATTGACCAAAGAAA+TGG | + | chr7_4:42337129-42337148 | Msa1154730:CDS | 40.0% | |
| AGAATCACAAGCTGCTATGA+AGG | + | chr7_4:42337153-42337172 | Msa1154730:CDS | 40.0% | |
| !!! | TTTTGCTCTAGCTCTTCTCT+CGG | - | chr7_4:42337425-42337444 | None:intergenic | 40.0% |
| ACGTGAAGCAGAAGAAAAGA+AGG | + | chr7_4:42337459-42337478 | Msa1154730:CDS | 40.0% | |
| AGTCCTAGAAAACAAACGTG+AGG | - | chr7_4:42337529-42337548 | None:intergenic | 40.0% | |
| !! | GATCGATGTTGTAGCTTTAG+TGG | + | chr7_4:42337635-42337654 | Msa1154730:intron | 40.0% |
| ! | TCTTTAGAAATCGTGGCCAA+TGG | + | chr7_4:42337669-42337688 | Msa1154730:intron | 40.0% |
| AAAGGGAAGTTACTAAGTCG+CGG | + | chr7_4:42337736-42337755 | Msa1154730:intron | 40.0% | |
| CACATGATGCAGAAAGAGAA+AGG | + | chr7_4:42338284-42338303 | Msa1154730:CDS | 40.0% | |
| AATGGATGCCCTCAAAATTC+CGG | + | chr7_4:42338330-42338349 | Msa1154730:CDS | 40.0% | |
| GAAGTGGTTGTACTATTAGC+CGG | - | chr7_4:42338352-42338371 | None:intergenic | 40.0% | |
| TGAAAGGCTATTAGCTGAAG+TGG | - | chr7_4:42338368-42338387 | None:intergenic | 40.0% | |
| TTCAGCTAATAGCCTTTCAG+AGG | + | chr7_4:42338369-42338388 | Msa1154730:CDS | 40.0% | |
| GCCAATGAATGTGGTTTAGT+CGG | + | chr7_4:42338391-42338410 | Msa1154730:CDS | 40.0% | |
| CCAATGAATGTGGTTTAGTC+GGG | + | chr7_4:42338392-42338411 | Msa1154730:CDS | 40.0% | |
| CAATGAATGTGGTTTAGTCG+GGG | + | chr7_4:42338393-42338412 | Msa1154730:CDS | 40.0% | |
| TTCATGCATGCATGTTCACA+AGG | + | chr7_4:42338498-42338517 | Msa1154730:intron | 40.0% | |
| AATGTCTCCGCTAAATGAAG+AGG | + | chr7_4:42338605-42338624 | Msa1154730:CDS | 40.0% | |
| AGAGGAGTTCAAGACCTATT+TGG | + | chr7_4:42338623-42338642 | Msa1154730:CDS | 40.0% | |
| GAAGCAAAATTGGACGTTAG+TGG | + | chr7_4:42338693-42338712 | Msa1154730:CDS | 40.0% | |
| GATTCTGTGTCTGAAAGTGA+CGG | - | chr7_4:42338774-42338793 | None:intergenic | 40.0% | |
| TTCTTCCTTCACCTAGGAAA+TGG | + | chr7_4:42338847-42338866 | Msa1154730:CDS | 40.0% | |
| GATATAGCATCATTGTGGGA+CGG | + | chr7_4:42338909-42338928 | Msa1154730:CDS | 40.0% | |
| ATATAGCATCATTGTGGGAC+GGG | + | chr7_4:42338910-42338929 | Msa1154730:CDS | 40.0% | |
| CTTCACAAAAGATGTGCAAG+AGG | + | chr7_4:42338971-42338990 | Msa1154730:CDS | 40.0% | |
| AAAAGATGTGCAAGAGGTGA+AGG | + | chr7_4:42338977-42338996 | Msa1154730:CDS | 40.0% | |
| AAAAGCTAGTGAGATGCTTG+TGG | + | chr7_4:42339013-42339032 | Msa1154730:CDS | 40.0% | |
| GACCAATTTCAACCTGTACT+GGG | + | chr7_4:42339077-42339096 | Msa1154730:CDS | 40.0% | |
| GAAACAAATAAAGGGCAACC+CGG | + | chr7_4:42339181-42339200 | Msa1154730:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr7_4:42339247-42339266 | None:intergenic | 40.0% | |
| CTTGTGTAAAAAGCAGGGTA+AGG | - | chr7_4:42339273-42339292 | None:intergenic | 40.0% | |
| !!! | TACCCTGCTTTTTACACAAG+AGG | + | chr7_4:42339273-42339292 | Msa1154730:intron | 40.0% |
| AGCCTCTTGTGTAAAAAGCA+GGG | - | chr7_4:42339278-42339297 | None:intergenic | 40.0% | |
| ! | AAATAACAAGGCGTTTGAGG+AGG | + | chr7_4:42339456-42339475 | Msa1154730:CDS | 40.0% |
| ! | GAAAAGTGTAGATACGCTCA+AGG | + | chr7_4:42339495-42339514 | Msa1154730:CDS | 40.0% |
| AAAGTGTAGATACGCTCAAG+GGG | + | chr7_4:42339497-42339516 | Msa1154730:CDS | 40.0% | |
| TGCGAAGGATATGGAAATTG+AGG | + | chr7_4:42339528-42339547 | Msa1154730:CDS | 40.0% | |
| !! | GACGCTGCATTTTGTTATCA+AGG | + | chr7_4:42339751-42339770 | Msa1154730:CDS | 40.0% |
| !! | GCTGCATTTTGTTATCAAGG+TGG | + | chr7_4:42339754-42339773 | Msa1154730:CDS | 40.0% |
| ! | TTAGTTGTAATGGGAGGGGA+GGG | - | chr7_4:42334464-42334483 | None:intergenic | 45.0% |
| CAAGAGTCGAAGAAGTTTGG+TGG | - | chr7_4:42334540-42334559 | None:intergenic | 45.0% | |
| !! | AGGAAGAGGATTTTGAGGAC+CGG | + | chr7_4:42335393-42335412 | Msa1154730:CDS | 45.0% |
| CTATTCGTCTGTCTTCAGAC+AGG | + | chr7_4:42335524-42335543 | Msa1154730:CDS | 45.0% | |
| AATCTGTGACTGTTGAGCCA+AGG | + | chr7_4:42335624-42335643 | Msa1154730:CDS | 45.0% | |
| ATCTGTGACTGTTGAGCCAA+GGG | + | chr7_4:42335625-42335644 | Msa1154730:CDS | 45.0% | |
| AGGATTGTTCTGCTTGCATC+CGG | + | chr7_4:42335662-42335681 | Msa1154730:CDS | 45.0% | |
| TGATATAGGTCATACCGCCT+TGG | - | chr7_4:42336129-42336148 | None:intergenic | 45.0% | |
| !!! | TGACTGTTTTTTTCCGGCCT+TGG | - | chr7_4:42336299-42336318 | None:intergenic | 45.0% |
| !! | AGTTCTGCCAGAAGCATCTA+TGG | - | chr7_4:42336323-42336342 | None:intergenic | 45.0% |
| GGCAGAACTATACATTCTGC+TGG | + | chr7_4:42336334-42336353 | Msa1154730:CDS | 45.0% | |
| TTCGTGAACTGCTTACTGCT+TGG | + | chr7_4:42336687-42336706 | Msa1154730:CDS | 45.0% | |
| ! | AGTCGTCAGCTGCTTTATGA+TGG | + | chr7_4:42336761-42336780 | Msa1154730:CDS | 45.0% |
| CATAGGATACTAGGGTCAAC+TGG | - | chr7_4:42336880-42336899 | None:intergenic | 45.0% | |
| CGTCTGCTTCATAGGATACT+AGG | - | chr7_4:42336889-42336908 | None:intergenic | 45.0% | |
| !! | GATTGTGCCGCTTGATGTAA+AGG | - | chr7_4:42336935-42336954 | None:intergenic | 45.0% |
| TTACATCAAGCGGCACAATC+TGG | + | chr7_4:42336935-42336954 | Msa1154730:CDS | 45.0% | |
| CCCCTTTCATCTTTAGTGCA+CGG | - | chr7_4:42337004-42337023 | None:intergenic | 45.0% | |
| CCGTGCACTAAAGATGAAAG+GGG | + | chr7_4:42337001-42337020 | Msa1154730:CDS | 45.0% | |
| TTGGCAGTAAAAGGGAGACT+AGG | + | chr7_4:42337292-42337311 | Msa1154730:intron | 45.0% | |
| TGGCAGTAAAAGGGAGACTA+GGG | + | chr7_4:42337293-42337312 | Msa1154730:intron | 45.0% | |
| ! | GCCTTCTTTTGTGCATGTAC+AGG | + | chr7_4:42337387-42337406 | Msa1154730:intron | 45.0% |
| GCCTGTACATGCACAAAAGA+AGG | - | chr7_4:42337391-42337410 | None:intergenic | 45.0% | |
| AGCAGAAGAAAAGAAGGCTC+AGG | + | chr7_4:42337465-42337484 | Msa1154730:CDS | 45.0% | |
| !! | GGACCTCACGTTTGTTTTCT+AGG | + | chr7_4:42337523-42337542 | Msa1154730:intron | 45.0% |
| ! | GTGGTCCTTTTGACAACCTA+TGG | - | chr7_4:42337570-42337589 | None:intergenic | 45.0% |
| ! | AACCGCGTCTTTAGAAATCG+TGG | + | chr7_4:42337662-42337681 | Msa1154730:intron | 45.0% |
| ! | TGGGCATTTTACTTCCTAGC+TGG | + | chr7_4:42337771-42337790 | Msa1154730:intron | 45.0% |
| ! | GGGCATTTTACTTCCTAGCT+GGG | + | chr7_4:42337772-42337791 | Msa1154730:intron | 45.0% |
| TGAAGAGAAACCAGAGAGAC+AGG | - | chr7_4:42337813-42337832 | None:intergenic | 45.0% | |
| AGCTGCCACAGAAAGAAGAA+TGG | + | chr7_4:42338312-42338331 | Msa1154730:CDS | 45.0% | |
| GGCATCCATTCTTCTTTCTG+TGG | - | chr7_4:42338320-42338339 | None:intergenic | 45.0% | |
| ! | CACATTCATTGGCCTCTGAA+AGG | - | chr7_4:42338384-42338403 | None:intergenic | 45.0% |
| CTTTCAGAGGCCAATGAATG+TGG | + | chr7_4:42338382-42338401 | Msa1154730:CDS | 45.0% | |
| CCCGACTAAACCACATTCAT+TGG | - | chr7_4:42338395-42338414 | None:intergenic | 45.0% | |
| CTGGTAAAGTTCCTTTCCAC+CGG | + | chr7_4:42338452-42338471 | Msa1154730:intron | 45.0% | |
| CACAAGGAGATCCTAGAAGA+TGG | + | chr7_4:42338514-42338533 | Msa1154730:intron | 45.0% | |
| GTTCAAGACCTATTTGGCGA+AGG | + | chr7_4:42338629-42338648 | Msa1154730:CDS | 45.0% | |
| ! | TTCTCTAGCCTTCGCCAAAT+AGG | - | chr7_4:42338640-42338659 | None:intergenic | 45.0% |
| !! | TGGTGCTGCTGAAGCAAAAT+TGG | + | chr7_4:42338683-42338702 | Msa1154730:CDS | 45.0% |
| ATCCGCAAGCTCAAGAGAAA+AGG | + | chr7_4:42338723-42338742 | Msa1154730:CDS | 45.0% | |
| ! | CACCTTTTCTCTTGAGCTTG+CGG | - | chr7_4:42338728-42338747 | None:intergenic | 45.0% |
| GCAAGCTCAAGAGAAAAGGT+GGG | + | chr7_4:42338727-42338746 | Msa1154730:CDS | 45.0% | |
| CAAGCTCAAGAGAAAAGGTG+GGG | + | chr7_4:42338728-42338747 | Msa1154730:CDS | 45.0% | |
| AAGCTCAAGAGAAAAGGTGG+GGG | + | chr7_4:42338729-42338748 | Msa1154730:CDS | 45.0% | |
| AAAAGGTGGGGGAAACTCAA+AGG | + | chr7_4:42338740-42338759 | Msa1154730:CDS | 45.0% | |
| GCAGCCGCTATGTTATTCAA+AGG | - | chr7_4:42338810-42338829 | None:intergenic | 45.0% | |
| AATAACATAGCGGCTGCATG+CGG | + | chr7_4:42338813-42338832 | Msa1154730:CDS | 45.0% | |
| AACCTTCGCTCTGCTTTACT+TGG | + | chr7_4:42339041-42339060 | Msa1154730:CDS | 45.0% | |
| ACCTTCGCTCTGCTTTACTT+GGG | + | chr7_4:42339042-42339061 | Msa1154730:CDS | 45.0% | |
| GGACCAATTTCAACCTGTAC+TGG | + | chr7_4:42339076-42339095 | Msa1154730:CDS | 45.0% | |
| ! | GTCCCAGTACAGGTTGAAAT+TGG | - | chr7_4:42339082-42339101 | None:intergenic | 45.0% |
| TTGCTTTCATGTCCCAGTAC+AGG | - | chr7_4:42339092-42339111 | None:intergenic | 45.0% | |
| TGGTTGCATTCAGTTCGTCT+CGG | - | chr7_4:42339118-42339137 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr7_4:42339248-42339267 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr7_4:42339251-42339270 | None:intergenic | 45.0% | |
| CAGCCTCTTGTGTAAAAAGC+AGG | - | chr7_4:42339279-42339298 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr7_4:42339284-42339303 | Msa1154730:intron | 45.0% |
| GTTGTTGTCATGTGACTGGA+AGG | - | chr7_4:42339324-42339343 | None:intergenic | 45.0% | |
| TCATATCTGAGGGGTAACCT+TGG | - | chr7_4:42339360-42339379 | None:intergenic | 45.0% | |
| GCAATCCACAACGAAGGATA+TGG | + | chr7_4:42339582-42339601 | Msa1154730:CDS | 45.0% | |
| GCAATCCGCAGAAAAGGATA+TGG | + | chr7_4:42339708-42339727 | Msa1154730:CDS | 45.0% | |
| ! | TAGTTGTAATGGGAGGGGAG+GGG | - | chr7_4:42334463-42334482 | None:intergenic | 50.0% |
| ! | GTTAGTTGTAATGGGAGGGG+AGG | - | chr7_4:42334465-42334484 | None:intergenic | 50.0% |
| GTGTTTCGAAGCGAGGAGAA+GGG | - | chr7_4:42334572-42334591 | None:intergenic | 50.0% | |
| AGTGTTTCGAAGCGAGGAGA+AGG | - | chr7_4:42334573-42334592 | None:intergenic | 50.0% | |
| ! | GGTTGAAGTGTTTCGAAGCG+AGG | - | chr7_4:42334579-42334598 | None:intergenic | 50.0% |
| TGATCAACGTGGTTTGAGGG+TGG | - | chr7_4:42334600-42334619 | None:intergenic | 50.0% | |
| ! | TGGCCGTCCTCATTTAGAAC+AGG | - | chr7_4:42335276-42335295 | None:intergenic | 50.0% |
| CAGGGCAAAGAGTTTCTGTC+TGG | + | chr7_4:42335543-42335562 | Msa1154730:CDS | 50.0% | |
| ! | CTCAATCGGGTGTTATCCCT+TGG | - | chr7_4:42335644-42335663 | None:intergenic | 50.0% |
| CAAGGGATAACACCCGATTG+AGG | + | chr7_4:42335642-42335661 | Msa1154730:CDS | 50.0% | |
| ! | TCTTTTTCTTTCCTGCCCCC+AGG | + | chr7_4:42336094-42336113 | Msa1154730:intron | 50.0% |
| CCTTGGAACACAAAACCTGG+GGG | - | chr7_4:42336112-42336131 | None:intergenic | 50.0% | |
| GCCTTGGAACACAAAACCTG+GGG | - | chr7_4:42336113-42336132 | None:intergenic | 50.0% | |
| CGCCTTGGAACACAAAACCT+GGG | - | chr7_4:42336114-42336133 | None:intergenic | 50.0% | |
| !! | CCAGGTTTTGTGTTCCAAGG+CGG | + | chr7_4:42336112-42336131 | Msa1154730:intron | 50.0% |
| CAGTCAGCCATAGATGCTTC+TGG | + | chr7_4:42336313-42336332 | Msa1154730:CDS | 50.0% | |
| ! | CGTTTTGCTTCCCTGAGAGT+AGG | - | chr7_4:42336848-42336867 | None:intergenic | 50.0% |
| GTTGCTCTCGTCTGCTTCAT+AGG | - | chr7_4:42336897-42336916 | None:intergenic | 50.0% | |
| !!! | GGAACTTTTGGAACAGGGCT+TGG | + | chr7_4:42336976-42336995 | Msa1154730:CDS | 50.0% |
| TGCCAGCTGCCAACATGTAT+GGG | - | chr7_4:42337033-42337052 | None:intergenic | 50.0% | |
| TTGCCAGCTGCCAACATGTA+TGG | - | chr7_4:42337034-42337053 | None:intergenic | 50.0% | |
| ATGCCACAACTGGCTGATAG+TGG | - | chr7_4:42337611-42337630 | None:intergenic | 50.0% | |
| TCGATCTGTGATGCCACAAC+TGG | - | chr7_4:42337621-42337640 | None:intergenic | 50.0% | |
| ! | GGCCACGATTTCTAAAGACG+CGG | - | chr7_4:42337667-42337686 | None:intergenic | 50.0% |
| GGAAGTTACTAAGTCGCGGA+GGG | + | chr7_4:42337740-42337759 | Msa1154730:intron | 50.0% | |
| GAAGTTACTAAGTCGCGGAG+GGG | + | chr7_4:42337741-42337760 | Msa1154730:intron | 50.0% | |
| CGCAAGCTCAAGAGAAAAGG+TGG | + | chr7_4:42338726-42338745 | Msa1154730:CDS | 50.0% | |
| AGGTGGTTCTTCCTTCACCT+AGG | + | chr7_4:42338841-42338860 | Msa1154730:CDS | 50.0% | |
| ! | GGAGAAGTCTTGTGTCCCAA+TGG | + | chr7_4:42338878-42338897 | Msa1154730:CDS | 50.0% |
| TGCAAGAGGTGAAGGAGTCT+GGG | + | chr7_4:42338985-42339004 | Msa1154730:CDS | 50.0% | |
| TCCCAAGTAAAGCAGAGCGA+AGG | - | chr7_4:42339046-42339065 | None:intergenic | 50.0% | |
| TCGCTCTGCTTTACTTGGGA+AGG | + | chr7_4:42339046-42339065 | Msa1154730:CDS | 50.0% | |
| ACTAAAGCTCCCGCATATGC+AGG | + | chr7_4:42339207-42339226 | Msa1154730:intron | 50.0% | |
| CTAAAGCTCCCGCATATGCA+GGG | + | chr7_4:42339208-42339227 | Msa1154730:intron | 50.0% | |
| TCATGTGACTGGAAGGTCAC+GGG | - | chr7_4:42339317-42339336 | None:intergenic | 50.0% | |
| GTCATGTGACTGGAAGGTCA+CGG | - | chr7_4:42339318-42339337 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr7_4:42339340-42339359 | Msa1154730:intron | 50.0% | |
| ACAGACTGCTCTGACTCAGT+TGG | + | chr7_4:42339420-42339439 | Msa1154730:CDS | 50.0% | |
| ! | TAACAAGGCGTTTGAGGAGG+AGG | + | chr7_4:42339459-42339478 | Msa1154730:CDS | 50.0% |
| AGATACGCTCAAGGGGCAAT+CGG | + | chr7_4:42339504-42339523 | Msa1154730:CDS | 50.0% | |
| CAAGGTGCAATCCACAACGA+AGG | + | chr7_4:42339576-42339595 | Msa1154730:CDS | 50.0% | |
| GCAATCCGCAGTGAAGGATA+TGG | + | chr7_4:42339645-42339664 | Msa1154730:CDS | 50.0% | |
| !! | TCCGTCGTTTGATTTGTCGG+AGG | + | chr7_4:42339813-42339832 | Msa1154730:CDS | 50.0% |
| GCCTCCGACAAATCAAACGA+CGG | - | chr7_4:42339817-42339836 | None:intergenic | 50.0% | |
| GCTATGAAGTCCGTGGTTGA+TGG | + | chr7_4:42339841-42339860 | Msa1154730:CDS | 50.0% | |
| ! | AGTTGTAATGGGAGGGGAGG+GGG | - | chr7_4:42334462-42334481 | None:intergenic | 55.0% |
| TTGTTCTGCTTGCATCCGGC+AGG | + | chr7_4:42335666-42335685 | Msa1154730:CDS | 55.0% | |
| ! | ACAACCAGCAAAGTGCCTGC+CGG | - | chr7_4:42335684-42335703 | None:intergenic | 55.0% |
| !! | CCCCCAGGTTTTGTGTTCCA+AGG | + | chr7_4:42336109-42336128 | Msa1154730:intron | 55.0% |
| CCGCCTTGGAACACAAAACC+TGG | - | chr7_4:42336115-42336134 | None:intergenic | 55.0% | |
| CAGATATGCTGTGAGGGCCA+AGG | + | chr7_4:42336279-42336298 | Msa1154730:intron | 55.0% | |
| AGCAGCTGACGACTGCTTGA+AGG | - | chr7_4:42336755-42336774 | None:intergenic | 55.0% | |
| GGGACGAACCCCATACATGT+TGG | + | chr7_4:42337021-42337040 | Msa1154730:CDS | 55.0% | |
| ACCCCATACATGTTGGCAGC+TGG | + | chr7_4:42337028-42337047 | Msa1154730:CDS | 55.0% | |
| GCCAGCTGCCAACATGTATG+GGG | - | chr7_4:42337032-42337051 | None:intergenic | 55.0% | |
| ACCACTTTCACAGCAGCCTG+TGG | + | chr7_4:42337585-42337604 | Msa1154730:intron | 55.0% | |
| !! | AACTGGCTGATAGTGGCCAC+AGG | - | chr7_4:42337604-42337623 | None:intergenic | 55.0% |
| TGGCCACTATCAGCCAGTTG+TGG | + | chr7_4:42337605-42337624 | Msa1154730:intron | 55.0% | |
| GGGAAGTTACTAAGTCGCGG+AGG | + | chr7_4:42337739-42337758 | Msa1154730:intron | 55.0% | |
| CATCTGGCAACCTGTCTCTC+TGG | + | chr7_4:42337800-42337819 | Msa1154730:intron | 55.0% | |
| AGGTGGGGGAAACTCAAAGG+AGG | + | chr7_4:42338743-42338762 | Msa1154730:CDS | 55.0% | |
| GGTGGGGGAAACTCAAAGGA+GGG | + | chr7_4:42338744-42338763 | Msa1154730:CDS | 55.0% | |
| GTGGGGGAAACTCAAAGGAG+GGG | + | chr7_4:42338745-42338764 | Msa1154730:CDS | 55.0% | |
| TAGCATCATTGTGGGACGGG+AGG | + | chr7_4:42338913-42338932 | Msa1154730:CDS | 55.0% | |
| TTGTGGGACGGGAGGTTTGA+TGG | + | chr7_4:42338921-42338940 | Msa1154730:CDS | 55.0% | |
| GGACGGGAGGTTTGATGGAA+TGG | + | chr7_4:42338926-42338945 | Msa1154730:CDS | 55.0% | |
| GTGCAAGAGGTGAAGGAGTC+TGG | + | chr7_4:42338984-42339003 | Msa1154730:CDS | 55.0% | |
| AGAGGTGAAGGAGTCTGGGT+TGG | + | chr7_4:42338989-42339008 | Msa1154730:CDS | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr7_4:42339203-42339222 | None:intergenic | 55.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr7_4:42339305-42339324 | None:intergenic | 55.0% | |
| GCGTTTGAGGAGGAGGTTGT+TGG | + | chr7_4:42339466-42339485 | Msa1154730:CDS | 55.0% | |
| GCAATCGGCTGCGAAGGATA+TGG | + | chr7_4:42339519-42339538 | Msa1154730:CDS | 55.0% | |
| CAAGGGGCAATCCGCAGAAA+AGG | + | chr7_4:42339702-42339721 | Msa1154730:CDS | 55.0% | |
| AATGGGAGGGGAGGGGGATT+AGG | - | chr7_4:42334456-42334475 | None:intergenic | 60.0% | |
| GGAACACAAAACCTGGGGGC+AGG | - | chr7_4:42336108-42336127 | None:intergenic | 60.0% | |
| TATGCTGTGAGGGCCAAGGC+CGG | + | chr7_4:42336283-42336302 | Msa1154730:CDS | 60.0% | |
| TTGTCCCCAGGCCTACTCTC+AGG | + | chr7_4:42336834-42336853 | Msa1154730:CDS | 60.0% | |
| TGTCCCCAGGCCTACTCTCA+GGG | + | chr7_4:42336835-42336854 | Msa1154730:CDS | 60.0% | |
| CTTCCCTGAGAGTAGGCCTG+GGG | - | chr7_4:42336841-42336860 | None:intergenic | 60.0% | |
| GCTTCCCTGAGAGTAGGCCT+GGG | - | chr7_4:42336842-42336861 | None:intergenic | 60.0% | |
| TGCTTCCCTGAGAGTAGGCC+TGG | - | chr7_4:42336843-42336862 | None:intergenic | 60.0% | |
| GCCACAGGCTGCTGTGAAAG+TGG | - | chr7_4:42337589-42337608 | None:intergenic | 60.0% | |
| TGGCCAATGGCAGCGCTACA+GGG | + | chr7_4:42337682-42337701 | Msa1154730:intron | 60.0% | |
| TAGCCCTGTAGCGCTGCCAT+TGG | - | chr7_4:42337688-42337707 | None:intergenic | 60.0% | |
| GTTACTAAGTCGCGGAGGGG+AGG | + | chr7_4:42337744-42337763 | Msa1154730:intron | 60.0% | |
| ! | AGTCGCGGAGGGGAGGATTT+TGG | + | chr7_4:42337751-42337770 | Msa1154730:intron | 60.0% |
| ! | GTCGCGGAGGGGAGGATTTT+GGG | + | chr7_4:42337752-42337771 | Msa1154730:intron | 60.0% |
| TCCTAGCTGGGCTGAGCATC+TGG | + | chr7_4:42337784-42337803 | Msa1154730:intron | 60.0% | |
| AGCGGCTGCATGCGGTTCTA+AGG | + | chr7_4:42338821-42338840 | Msa1154730:CDS | 60.0% | |
| !! | GGCTGCATGCGGTTCTAAGG+TGG | + | chr7_4:42338824-42338843 | Msa1154730:CDS | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr7_4:42339202-42339221 | None:intergenic | 60.0% |
| TTCCCGGACCCTGCATATGC+GGG | - | chr7_4:42339219-42339238 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr7_4:42339220-42339239 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr7_4:42339219-42339238 | Msa1154730:intron | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr7_4:42339220-42339239 | Msa1154730:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr7_4:42339235-42339254 | None:intergenic | 60.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr7_4:42339351-42339370 | None:intergenic | 60.0% | |
| CAAGGGGCAATCCGCAGTGA+AGG | + | chr7_4:42339639-42339658 | Msa1154730:CDS | 60.0% | |
| GGCTGACGCTATGAAGTCCG+TGG | + | chr7_4:42339834-42339853 | Msa1154730:CDS | 60.0% | |
| GCATCCGGCAGGCACTTTGC+TGG | + | chr7_4:42335677-42335696 | Msa1154730:CDS | 65.0% | |
| GTGGCCAATGGCAGCGCTAC+AGG | + | chr7_4:42337681-42337700 | Msa1154730:intron | 65.0% | |
| GCCAGATGCTCAGCCCAGCT+AGG | - | chr7_4:42337788-42337807 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr7_4:42339213-42339232 | Msa1154730:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr7_4:42339214-42339233 | Msa1154730:intron | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr7_4:42339218-42339237 | Msa1154730:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr7_4:42339233-42339252 | Msa1154730:intron | 65.0% | |
| CAAGGGGCAATCGGCTGCGA+AGG | + | chr7_4:42339513-42339532 | Msa1154730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 42334435 | 42339876 | 42334435 | ID=Msa1154730;Name=Msa1154730 |
| chr7_4 | mRNA | 42334435 | 42339876 | 42334435 | ID=Msa1154730-mRNA-1;Parent=Msa1154730;Name=Msa1154730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=51|0.57|0.37|1|1|1|8|0|878 |
| chr7_4 | exon | 42334435 | 42334734 | 42334435 | ID=Msa1154730-mRNA-1:exon:10387;Parent=Msa1154730-mRNA-1 |
| chr7_4 | exon | 42335359 | 42335747 | 42335359 | ID=Msa1154730-mRNA-1:exon:10388;Parent=Msa1154730-mRNA-1 |
| chr7_4 | exon | 42336282 | 42336396 | 42336282 | ID=Msa1154730-mRNA-1:exon:10389;Parent=Msa1154730-mRNA-1 |
| chr7_4 | exon | 42336683 | 42337174 | 42336683 | ID=Msa1154730-mRNA-1:exon:10390;Parent=Msa1154730-mRNA-1 |
| chr7_4 | exon | 42337409 | 42337486 | 42337409 | ID=Msa1154730-mRNA-1:exon:10391;Parent=Msa1154730-mRNA-1 |
| chr7_4 | exon | 42338268 | 42338454 | 42338268 | ID=Msa1154730-mRNA-1:exon:10392;Parent=Msa1154730-mRNA-1 |
| chr7_4 | exon | 42338601 | 42339202 | 42338601 | ID=Msa1154730-mRNA-1:exon:10393;Parent=Msa1154730-mRNA-1 |
| chr7_4 | exon | 42339352 | 42339876 | 42339352 | ID=Msa1154730-mRNA-1:exon:10394;Parent=Msa1154730-mRNA-1 |
| chr7_4 | five_prime_UTR | 42334435 | 42334485 | 42334435 | ID=Msa1154730-mRNA-1:five_prime_utr;Parent=Msa1154730-mRNA-1 |
| chr7_4 | CDS | 42334486 | 42334734 | 42334486 | ID=Msa1154730-mRNA-1:cds;Parent=Msa1154730-mRNA-1 |
| chr7_4 | CDS | 42335359 | 42335747 | 42335359 | ID=Msa1154730-mRNA-1:cds;Parent=Msa1154730-mRNA-1 |
| chr7_4 | CDS | 42336282 | 42336396 | 42336282 | ID=Msa1154730-mRNA-1:cds;Parent=Msa1154730-mRNA-1 |
| chr7_4 | CDS | 42336683 | 42337174 | 42336683 | ID=Msa1154730-mRNA-1:cds;Parent=Msa1154730-mRNA-1 |
| chr7_4 | CDS | 42337409 | 42337486 | 42337409 | ID=Msa1154730-mRNA-1:cds;Parent=Msa1154730-mRNA-1 |
| chr7_4 | CDS | 42338268 | 42338454 | 42338268 | ID=Msa1154730-mRNA-1:cds;Parent=Msa1154730-mRNA-1 |
| chr7_4 | CDS | 42338601 | 42339202 | 42338601 | ID=Msa1154730-mRNA-1:cds;Parent=Msa1154730-mRNA-1 |
| chr7_4 | CDS | 42339352 | 42339876 | 42339352 | ID=Msa1154730-mRNA-1:cds;Parent=Msa1154730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
