Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0016580 | 0.886942 | 2.204398e-72 | -8.615850e-47 |
| Msa0016570 | Msa0016580 | 0.934146 | 6.336800e-96 | -8.615850e-47 |
| Msa0016580 | Msa0064970 | 0.865732 | 4.769143e-65 | -8.615850e-47 |
| Msa0016580 | Msa0071500 | 0.801441 | 8.989267e-49 | -8.615850e-47 |
| Msa0016580 | Msa0102070 | 0.838850 | 2.251064e-57 | -8.615850e-47 |
| Msa0016580 | Msa0110260 | 0.870718 | 1.180343e-66 | -8.615850e-47 |
| Msa0016580 | Msa0110270 | 0.964118 | 6.320340e-123 | -8.615850e-47 |
| Msa0016580 | Msa0111510 | 0.816342 | 5.810382e-52 | -8.615850e-47 |
| Msa0016580 | Msa0120300 | 0.819415 | 1.175321e-52 | -8.615850e-47 |
| Msa0016580 | Msa0131770 | 0.815671 | 8.201668e-52 | -8.615850e-47 |
| Msa0016580 | Msa0142220 | 0.876716 | 1.119292e-68 | -8.615850e-47 |
| Msa0016580 | Msa0145750 | 0.800873 | 1.175096e-48 | -8.615850e-47 |
| Msa0016580 | Msa0153910 | 0.843389 | 1.443699e-58 | -8.615850e-47 |
| Msa0016580 | Msa0197010 | 0.807501 | 4.901444e-50 | -8.615850e-47 |
| Msa0016580 | Msa0200000 | 0.872872 | 2.276834e-67 | -8.615850e-47 |
| Msa0016580 | Msa0227480 | 0.838875 | 2.217237e-57 | -8.615850e-47 |
| Msa0016580 | Msa0232850 | 0.831238 | 1.869230e-55 | -8.615850e-47 |
| Msa0016580 | Msa0252970 | 0.824549 | 7.598853e-54 | -8.615850e-47 |
| Msa0016580 | Msa0266720 | 0.816363 | 5.746625e-52 | -8.615850e-47 |
| Msa0016580 | Msa0267000 | 0.845340 | 4.316107e-59 | -8.615850e-47 |
| Msa0016580 | Msa0267010 | 0.858860 | 6.161667e-63 | -8.615850e-47 |
| Msa0016580 | Msa0270520 | 0.841074 | 5.921927e-58 | -8.615850e-47 |
| Msa0016580 | Msa0273100 | 0.832106 | 1.142039e-55 | -8.615850e-47 |
| Msa0016580 | Msa0285810 | 0.809367 | 1.959993e-50 | -8.615850e-47 |
| Msa0016580 | Msa0295770 | 0.803986 | 2.682620e-49 | -8.615850e-47 |
| Msa0016580 | Msa0304170 | 0.864635 | 1.055151e-64 | -8.615850e-47 |
| Msa0016580 | Msa0305190 | 0.803946 | 2.734107e-49 | -8.615850e-47 |
| Msa0016580 | Msa0306460 | 0.891071 | 5.551950e-74 | -8.615850e-47 |
| Msa0016580 | Msa0309020 | 0.818672 | 1.735133e-52 | -8.615850e-47 |
| Msa0016580 | Msa0342240 | 0.858263 | 9.287665e-63 | -8.615850e-47 |
| Msa0016580 | Msa0349540 | 0.803066 | 4.163266e-49 | -8.615850e-47 |
| Msa0016580 | Msa0355220 | 0.820022 | 8.540610e-53 | -8.615850e-47 |
| Msa0016580 | Msa0360510 | 0.841943 | 3.496565e-58 | -8.615850e-47 |
| Msa0016580 | Msa0362420 | 0.820808 | 5.640671e-53 | -8.615850e-47 |
| Msa0016580 | Msa0363300 | 0.816376 | 5.709284e-52 | -8.615850e-47 |
| Msa0016580 | Msa0365500 | 0.810104 | 1.360418e-50 | -8.615850e-47 |
| Msa0016580 | Msa0369730 | 0.816449 | 5.499028e-52 | -8.615850e-47 |
| Msa0016580 | Msa0371730 | 0.816948 | 4.249006e-52 | -8.615850e-47 |
| Msa0016580 | Msa0384800 | 0.828558 | 8.409895e-55 | -8.615850e-47 |
| Msa0016580 | Msa0384890 | 0.800602 | 1.334368e-48 | -8.615850e-47 |
| Msa0016580 | Msa0394970 | 0.817859 | 2.650522e-52 | -8.615850e-47 |
| Msa0016580 | Msa0402290 | 0.824656 | 7.173306e-54 | -8.615850e-47 |
| Msa0016580 | Msa0407750 | 0.812747 | 3.628389e-51 | -8.615850e-47 |
| Msa0016580 | Msa0414410 | 0.834434 | 3.003972e-56 | -8.615850e-47 |
| Msa0016580 | Msa0414420 | 0.857540 | 1.522651e-62 | -8.615850e-47 |
| Msa0016580 | Msa0435230 | 0.808827 | 2.558216e-50 | -8.615850e-47 |
| Msa0016580 | Msa0436800 | 0.811911 | 5.523484e-51 | -8.615850e-47 |
| Msa0016580 | Msa0438620 | 0.832949 | 7.059948e-56 | -8.615850e-47 |
| Msa0016580 | Msa0444130 | 0.883431 | 4.513249e-71 | -8.615850e-47 |
| Msa0016580 | Msa0450000 | 0.850117 | 2.088868e-60 | -8.615850e-47 |
| Msa0016580 | Msa0452900 | 0.864661 | 1.035349e-64 | -8.615850e-47 |
| Msa0016580 | Msa0453120 | 0.836272 | 1.031042e-56 | -8.615850e-47 |
| Msa0016580 | Msa0459160 | 0.806617 | 7.539953e-50 | -8.615850e-47 |
| Msa0016580 | Msa0479340 | 0.800895 | 1.163079e-48 | -8.615850e-47 |
| Msa0016580 | Msa0485370 | 0.808711 | 2.708713e-50 | -8.615850e-47 |
| Msa0016580 | Msa0491590 | 0.850022 | 2.220787e-60 | -8.615850e-47 |
| Msa0016580 | Msa0502340 | 0.828816 | 7.284874e-55 | -8.615850e-47 |
| Msa0016580 | Msa0502760 | 0.844504 | 7.258676e-59 | -8.615850e-47 |
| Msa0016580 | Msa0506270 | 0.828522 | 8.577607e-55 | -8.615850e-47 |
| Msa0016580 | Msa0534540 | 0.815824 | 7.585018e-52 | -8.615850e-47 |
| Msa0016580 | Msa0544240 | 0.809972 | 1.452483e-50 | -8.615850e-47 |
| Msa0016580 | Msa0564890 | 0.834184 | 3.471359e-56 | -8.615850e-47 |
| Msa0016580 | Msa0589780 | 0.836519 | 8.921669e-57 | -8.615850e-47 |
| Msa0016580 | Msa0596150 | 0.825236 | 5.231564e-54 | -8.615850e-47 |
| Msa0016580 | Msa0598780 | 0.801812 | 7.547886e-49 | -8.615850e-47 |
| Msa0016580 | Msa0600700 | 0.806055 | 9.903688e-50 | -8.615850e-47 |
| Msa0016580 | Msa0604350 | 0.843539 | 1.317097e-58 | -8.615850e-47 |
| Msa0016580 | Msa0636170 | 0.852364 | 4.845466e-61 | -8.615850e-47 |
| Msa0016580 | Msa0639610 | 0.832131 | 1.125974e-55 | -8.615850e-47 |
| Msa0016580 | Msa0650630 | 0.805876 | 1.080374e-49 | -8.615850e-47 |
| Msa0016580 | Msa0668260 | 0.841578 | 4.364295e-58 | -8.615850e-47 |
| Msa0016580 | Msa0678930 | 0.834171 | 3.497033e-56 | -8.615850e-47 |
| Msa0016580 | Msa0686270 | 0.806929 | 6.477624e-50 | -8.615850e-47 |
| Msa0016580 | Msa0694370 | 0.836490 | 9.074626e-57 | -8.615850e-47 |
| Msa0016580 | Msa0697120 | 0.823190 | 1.582853e-53 | -8.615850e-47 |
| Msa0016580 | Msa0726140 | 0.837912 | 3.927344e-57 | -8.615850e-47 |
| Msa0016580 | Msa0729800 | 0.881394 | 2.488989e-70 | -8.615850e-47 |
| Msa0016580 | Msa0731550 | 0.827656 | 1.386597e-54 | -8.615850e-47 |
| Msa0016580 | Msa0733290 | 0.877906 | 4.315277e-69 | -8.615850e-47 |
| Msa0016580 | Msa0741990 | 0.855310 | 6.875292e-62 | -8.615850e-47 |
| Msa0016580 | Msa0743810 | 0.867013 | 1.870935e-65 | -8.615850e-47 |
| Msa0016580 | Msa0745060 | 0.847175 | 1.365826e-59 | -8.615850e-47 |
| Msa0016580 | Msa0760130 | 0.805205 | 1.493961e-49 | -8.615850e-47 |
| Msa0016580 | Msa0764960 | 0.827950 | 1.178438e-54 | -8.615850e-47 |
| Msa0016580 | Msa0766630 | 0.842586 | 2.362353e-58 | -8.615850e-47 |
| Msa0016580 | Msa0767720 | 0.844843 | 5.882717e-59 | -8.615850e-47 |
| Msa0016580 | Msa0768370 | 0.807944 | 3.947160e-50 | -8.615850e-47 |
| Msa0016580 | Msa0775300 | 0.820733 | 5.869728e-53 | -8.615850e-47 |
| Msa0016580 | Msa0777790 | 0.809180 | 2.149126e-50 | -8.615850e-47 |
| Msa0016580 | Msa0783160 | 0.844021 | 9.784410e-59 | -8.615850e-47 |
| Msa0016580 | Msa0787600 | 0.830168 | 3.419139e-55 | -8.615850e-47 |
| Msa0016580 | Msa0789250 | 0.857719 | 1.347706e-62 | -8.615850e-47 |
| Msa0016580 | Msa0808010 | 0.849205 | 3.754331e-60 | -8.615850e-47 |
| Msa0016580 | Msa0808020 | 0.845075 | 5.091501e-59 | -8.615850e-47 |
| Msa0016580 | Msa0811080 | 0.867844 | 1.014311e-65 | -8.615850e-47 |
| Msa0016580 | Msa0811270 | 0.830787 | 2.412246e-55 | -8.615850e-47 |
| Msa0016580 | Msa0813400 | 0.806542 | 7.821367e-50 | -8.615850e-47 |
| Msa0016580 | Msa0820850 | 0.815977 | 7.011219e-52 | -8.615850e-47 |
| Msa0016580 | Msa0825860 | 0.837473 | 5.090621e-57 | -8.615850e-47 |
| Msa0016580 | Msa0846210 | 0.822358 | 2.472087e-53 | -8.615850e-47 |
| Msa0016580 | Msa0846330 | 0.823517 | 1.327637e-53 | -8.615850e-47 |
| Msa0016580 | Msa0846350 | 0.847397 | 1.186599e-59 | -8.615850e-47 |
| Msa0016580 | Msa0848060 | 0.816901 | 4.355465e-52 | -8.615850e-47 |
| Msa0016580 | Msa0848960 | 0.817343 | 3.464876e-52 | -8.615850e-47 |
| Msa0016580 | Msa0851390 | 0.820654 | 6.117402e-53 | -8.615850e-47 |
| Msa0016580 | Msa0858980 | 0.838952 | 2.118565e-57 | -8.615850e-47 |
| Msa0016580 | Msa0861130 | 0.815071 | 1.115641e-51 | -8.615850e-47 |
| Msa0016580 | Msa0865320 | 0.814765 | 1.304016e-51 | -8.615850e-47 |
| Msa0016580 | Msa0872230 | 0.805005 | 1.645084e-49 | -8.615850e-47 |
| Msa0016580 | Msa0885290 | 0.815407 | 9.394170e-52 | -8.615850e-47 |
| Msa0016580 | Msa0886740 | 0.800766 | 1.235271e-48 | -8.615850e-47 |
| Msa0016580 | Msa0886750 | 0.824503 | 7.793650e-54 | -8.615850e-47 |
| Msa0016580 | Msa0888370 | 0.866520 | 2.684907e-65 | -8.615850e-47 |
| Msa0016580 | Msa0889850 | 0.816556 | 5.203266e-52 | -8.615850e-47 |
| Msa0016580 | Msa0896080 | 0.828304 | 9.684164e-55 | -8.615850e-47 |
| Msa0016580 | Msa0899430 | 0.806261 | 8.965542e-50 | -8.615850e-47 |
| Msa0016580 | Msa0899450 | 0.820527 | 6.545228e-53 | -8.615850e-47 |
| Msa0016580 | Msa0907260 | 0.838867 | 2.227720e-57 | -8.615850e-47 |
| Msa0016580 | Msa0927380 | 0.805964 | 1.035081e-49 | -8.615850e-47 |
| Msa0016580 | Msa0952350 | 0.815653 | 8.281325e-52 | -8.615850e-47 |
| Msa0016580 | Msa0954910 | 0.836205 | 1.072778e-56 | -8.615850e-47 |
| Msa0016580 | Msa0956270 | 0.854745 | 1.002857e-61 | -8.615850e-47 |
| Msa0016580 | Msa0958550 | 0.801285 | 9.678075e-49 | -8.615850e-47 |
| Msa0016580 | Msa0976670 | 0.819466 | 1.144185e-52 | -8.615850e-47 |
| Msa0016580 | Msa0979850 | 0.826040 | 3.374799e-54 | -8.615850e-47 |
| Msa0016580 | Msa0981370 | 0.823097 | 1.663795e-53 | -8.615850e-47 |
| Msa0016580 | Msa0988370 | 0.800711 | 1.267949e-48 | -8.615850e-47 |
| Msa0016580 | Msa0989060 | 0.847825 | 9.048997e-60 | -8.615850e-47 |
| Msa0016580 | Msa1015810 | 0.800589 | 1.342392e-48 | -8.615850e-47 |
| Msa0016580 | Msa1016280 | 0.849131 | 3.936058e-60 | -8.615850e-47 |
| Msa0016580 | Msa1023050 | 0.820061 | 8.370073e-53 | -8.615850e-47 |
| Msa0016580 | Msa1024240 | 0.826068 | 3.322530e-54 | -8.615850e-47 |
| Msa0016580 | Msa1024370 | 0.811036 | 8.557822e-51 | -8.615850e-47 |
| Msa0016580 | Msa1025360 | 0.863925 | 1.756731e-64 | -8.615850e-47 |
| Msa0016580 | Msa1025370 | 0.848385 | 6.338399e-60 | -8.615850e-47 |
| Msa0016580 | Msa1029240 | 0.820458 | 6.785975e-53 | -8.615850e-47 |
| Msa0016580 | Msa1030060 | 0.824222 | 9.074575e-54 | -8.615850e-47 |
| Msa0016580 | Msa1044830 | 0.854014 | 1.631918e-61 | -8.615850e-47 |
| Msa0016580 | Msa1044840 | 0.864760 | 9.638979e-65 | -8.615850e-47 |
| Msa0016580 | Msa1059570 | 0.805443 | 1.331666e-49 | -8.615850e-47 |
| Msa0016580 | Msa1065570 | 0.827943 | 1.183281e-54 | -8.615850e-47 |
| Msa0016580 | Msa1071100 | 0.804389 | 2.212048e-49 | -8.615850e-47 |
| Msa0016580 | Msa1092990 | 0.848307 | 6.664027e-60 | -8.615850e-47 |
| Msa0016580 | Msa1099970 | 0.812727 | 3.666223e-51 | -8.615850e-47 |
| Msa0016580 | Msa1100980 | 0.842693 | 2.212386e-58 | -8.615850e-47 |
| Msa0016580 | Msa1109440 | 0.828031 | 1.126825e-54 | -8.615850e-47 |
| Msa0016580 | Msa1111150 | 0.850554 | 1.575543e-60 | -8.615850e-47 |
| Msa0016580 | Msa1114030 | 0.810312 | 1.226916e-50 | -8.615850e-47 |
| Msa0016580 | Msa1121200 | 0.830494 | 2.845415e-55 | -8.615850e-47 |
| Msa0016580 | Msa1121480 | 0.807037 | 6.146242e-50 | -8.615850e-47 |
| Msa0016580 | Msa1121490 | 0.808620 | 2.831967e-50 | -8.615850e-47 |
| Msa0016580 | Msa1135220 | 0.830422 | 2.964104e-55 | -8.615850e-47 |
| Msa0016580 | Msa1135740 | 0.821900 | 3.157771e-53 | -8.615850e-47 |
| Msa0016580 | Msa1136090 | 0.818643 | 1.760986e-52 | -8.615850e-47 |
| Msa0016580 | Msa1137690 | 0.835564 | 1.559672e-56 | -8.615850e-47 |
| Msa0016580 | Msa1146110 | 0.887351 | 1.540074e-72 | -8.615850e-47 |
| Msa0016580 | Msa1148020 | 0.828068 | 1.103996e-54 | -8.615850e-47 |
| Msa0016580 | Msa1150370 | 0.816171 | 6.344308e-52 | -8.615850e-47 |
| Msa0016580 | Msa1154730 | 0.800142 | 1.655529e-48 | -8.615850e-47 |
| Msa0016580 | Msa1160670 | 0.804362 | 2.240015e-49 | -8.615850e-47 |
| Msa0016580 | Msa1165540 | 0.802123 | 6.513197e-49 | -8.615850e-47 |
| Msa0016580 | Msa1187940 | 0.846357 | 2.285987e-59 | -8.615850e-47 |
| Msa0016580 | Msa1187950 | 0.866740 | 2.285517e-65 | -8.615850e-47 |
| Msa0016580 | Msa1192640 | 0.839351 | 1.669576e-57 | -8.615850e-47 |
| Msa0016580 | Msa1246880 | 0.805725 | 1.161892e-49 | -8.615850e-47 |
| Msa0016580 | Msa1248300 | 0.808241 | 3.411963e-50 | -8.615850e-47 |
| Msa0016580 | Msa1260100 | 0.820443 | 6.841326e-53 | -8.615850e-47 |
| Msa0016580 | Msa1269670 | 0.843680 | 1.207179e-58 | -8.615850e-47 |
| Msa0016580 | Msa1270230 | 0.871671 | 5.721890e-67 | -8.615850e-47 |
| Msa0016580 | Msa1270240 | 0.847416 | 1.172692e-59 | -8.615850e-47 |
| Msa0016580 | Msa1270270 | 0.834357 | 3.141319e-56 | -8.615850e-47 |
| Msa0016580 | Msa1273230 | 0.825289 | 5.082991e-54 | -8.615850e-47 |
| Msa0016580 | Msa1283330 | 0.881019 | 3.397596e-70 | -8.615850e-47 |
| Msa0016580 | Msa1284680 | 0.828121 | 1.071872e-54 | -8.615850e-47 |
| Msa0016580 | Msa1285930 | 0.857946 | 1.153885e-62 | -8.615850e-47 |
| Msa0016580 | Msa1287800 | 0.859618 | 3.652809e-63 | -8.615850e-47 |
| Msa0016580 | Msa1287810 | 0.861977 | 7.017252e-64 | -8.615850e-47 |
| Msa0016580 | Msa1289420 | 0.801555 | 8.518903e-49 | -8.615850e-47 |
| Msa0016580 | Msa1289430 | 0.827475 | 1.533165e-54 | -8.615850e-47 |
| Msa0016580 | Msa1307890 | 0.801970 | 7.001781e-49 | -8.615850e-47 |
| Msa0016580 | Msa1320300 | 0.845151 | 4.856204e-59 | -8.615850e-47 |
| Msa0016580 | Msa1340590 | 0.875397 | 3.181521e-68 | -8.615850e-47 |
| Msa0016580 | Msa1344520 | 0.842049 | 3.278473e-58 | -8.615850e-47 |
| Msa0016580 | Msa1360610 | 0.809249 | 2.077193e-50 | -8.615850e-47 |
| Msa0016580 | Msa1366810 | 0.830127 | 3.498120e-55 | -8.615850e-47 |
| Msa0016580 | Msa1381530 | 0.802732 | 4.879389e-49 | -8.615850e-47 |
| Msa0016580 | Msa1382690 | 0.822958 | 1.792564e-53 | -8.615850e-47 |
| Msa0016580 | Msa1397580 | 0.867779 | 1.063683e-65 | -8.615850e-47 |
| Msa0016580 | Msa1397860 | 0.823754 | 1.168175e-53 | -8.615850e-47 |
| Msa0016580 | Msa1400720 | 0.819388 | 1.192136e-52 | -8.615850e-47 |
| Msa0016580 | Msa1402790 | 0.831475 | 1.634680e-55 | -8.615850e-47 |
| Msa0016580 | Msa1404000 | 0.837134 | 6.218283e-57 | -8.615850e-47 |
| Msa0016580 | Msa1408780 | 0.813527 | 2.446198e-51 | -8.615850e-47 |
| Msa0016580 | Msa1415310 | 0.812012 | 5.251560e-51 | -8.615850e-47 |
| Msa0016580 | Msa1422180 | 0.871991 | 4.478973e-67 | -8.615850e-47 |
| Msa0016580 | Msa1433120 | 0.838315 | 3.093700e-57 | -8.615850e-47 |
| Msa0016580 | Msa1451570 | 0.822936 | 1.814127e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 9 sgRNAs with CRISPR-Local
Find 12 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCTAGTTCATAATCTTT+TGG | 0.250279 | 1_1:-27494348 | None:intergenic |
| AGTTGAGATAAAGAGGAAAA+TGG | 0.370037 | 1_1:+27494224 | Msa0016580:CDS |
| ACCAAAAGATTATGAACTAG+AGG | 0.481301 | 1_1:+27494347 | Msa0016580:CDS |
| ATACATCAAATATGAATCCA+AGG | 0.538148 | 1_1:+27494322 | Msa0016580:CDS |
| GATGCAGAGCTGTAGAAGGC+TGG | 0.573955 | 1_1:+27494249 | Msa0016580:intron |
| CCAAAAGATTATGAACTAGA+GGG | 0.607622 | 1_1:+27494348 | Msa0016580:CDS |
| TACATCAAATATGAATCCAA+GGG | 0.613150 | 1_1:+27494323 | Msa0016580:CDS |
| TGATTTAGAAATACTCTCGA+AGG | 0.636930 | 1_1:+27494299 | Msa0016580:CDS |
| AGGCTGGTAATGATAGCGAA+AGG | 0.640851 | 1_1:+27494265 | Msa0016580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATACATCAAATATGAATCCA+AGG | + | chr1_1:27494322-27494341 | Msa0016580:CDS | 25.0% |
| ! | TACATCAAATATGAATCCAA+GGG | + | chr1_1:27494323-27494342 | Msa0016580:CDS | 25.0% |
| GTGAAAAAGTTGAGATAAAG+AGG | + | chr1_1:27494217-27494236 | Msa0016580:CDS | 30.0% | |
| AGTTGAGATAAAGAGGAAAA+TGG | + | chr1_1:27494224-27494243 | Msa0016580:CDS | 30.0% | |
| TGATTTAGAAATACTCTCGA+AGG | + | chr1_1:27494299-27494318 | Msa0016580:CDS | 30.0% | |
| ACCAAAAGATTATGAACTAG+AGG | + | chr1_1:27494347-27494366 | Msa0016580:CDS | 30.0% | |
| CCAAAAGATTATGAACTAGA+GGG | + | chr1_1:27494348-27494367 | Msa0016580:CDS | 30.0% | |
| !!! | TCATAATCTTTTGGTTCCCT+TGG | - | chr1_1:27494342-27494361 | None:intergenic | 35.0% |
| !! | CCCTCTAGTTCATAATCTTT+TGG | - | chr1_1:27494351-27494370 | None:intergenic | 35.0% |
| ! | AGGCTGGTAATGATAGCGAA+AGG | + | chr1_1:27494265-27494284 | Msa0016580:CDS | 45.0% |
| ! | GGTTGATGCAGAGCTGTAGA+AGG | + | chr1_1:27494245-27494264 | Msa0016580:intron | 50.0% |
| GATGCAGAGCTGTAGAAGGC+TGG | + | chr1_1:27494249-27494268 | Msa0016580:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 27494180 | 27494386 | 27494180 | ID=Msa0016580;Name=Msa0016580 |
| chr1_1 | mRNA | 27494180 | 27494386 | 27494180 | ID=Msa0016580-mRNA-1;Parent=Msa0016580;Name=Msa0016580-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|0|0|2|0|62 |
| chr1_1 | exon | 27494180 | 27494245 | 27494180 | ID=Msa0016580-mRNA-1:exon:9285;Parent=Msa0016580-mRNA-1 |
| chr1_1 | exon | 27494264 | 27494386 | 27494264 | ID=Msa0016580-mRNA-1:exon:9286;Parent=Msa0016580-mRNA-1 |
| chr1_1 | CDS | 27494180 | 27494245 | 27494180 | ID=Msa0016580-mRNA-1:cds;Parent=Msa0016580-mRNA-1 |
| chr1_1 | CDS | 27494264 | 27494386 | 27494264 | ID=Msa0016580-mRNA-1:cds;Parent=Msa0016580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
