Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029240 | KEH23328.1 | 72.283 | 736 | 132 | 6 | 3 | 674 | 1 | 728 | 0.0 | 1030 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029240 | sp|Q9H8Y5|ANKZ1_HUMAN | 35.738 | 305 | 158 | 9 | 46 | 326 | 62 | 352 | 5.21e-39 | 159 |
| Msa1029240 | sp|Q9H8Y5|ANKZ1_HUMAN | 47.059 | 85 | 45 | 0 | 334 | 418 | 537 | 621 | 1.76e-13 | 78.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029240 | A0A072U2A1 | 72.283 | 736 | 132 | 6 | 3 | 674 | 1 | 728 | 0.0 | 1030 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015390 | Msa1029240 | 0.802097 | 6.594070e-49 | -8.615850e-47 |
| Msa0016580 | Msa1029240 | 0.820458 | 6.785975e-53 | -8.615850e-47 |
| Msa0021510 | Msa1029240 | 0.810514 | 1.109905e-50 | -8.615850e-47 |
| Msa0099210 | Msa1029240 | 0.804703 | 1.902387e-49 | -8.615850e-47 |
| Msa0110270 | Msa1029240 | 0.808023 | 3.796882e-50 | -8.615850e-47 |
| Msa0114060 | Msa1029240 | 0.803052 | 4.190146e-49 | -8.615850e-47 |
| Msa0661650 | Msa1029240 | 0.813026 | 3.152576e-51 | -8.615850e-47 |
| Msa0681250 | Msa1029240 | 0.810241 | 1.270989e-50 | -8.615850e-47 |
| Msa0681270 | Msa1029240 | 0.808722 | 2.693278e-50 | -8.615850e-47 |
| Msa0694370 | Msa1029240 | 0.826908 | 2.095178e-54 | -8.615850e-47 |
| Msa0701010 | Msa1029240 | 0.801467 | 8.880853e-49 | -8.615850e-47 |
| Msa0731940 | Msa1029240 | 0.823596 | 1.272381e-53 | -8.615850e-47 |
| Msa0735170 | Msa1029240 | 0.803488 | 3.403013e-49 | -8.615850e-47 |
| Msa0760130 | Msa1029240 | 0.803557 | 3.293960e-49 | -8.615850e-47 |
| Msa0766630 | Msa1029240 | 0.819038 | 1.432415e-52 | -8.615850e-47 |
| Msa0768370 | Msa1029240 | 0.804297 | 2.310848e-49 | -8.615850e-47 |
| Msa0810220 | Msa1029240 | 0.802096 | 6.598917e-49 | -8.615850e-47 |
| Msa0820850 | Msa1029240 | 0.808083 | 3.686774e-50 | -8.615850e-47 |
| Msa0179430 | Msa1029240 | 0.818127 | 2.304694e-52 | -8.615850e-47 |
| Msa0188460 | Msa1029240 | 0.814875 | 1.233139e-51 | -8.615850e-47 |
| Msa0222890 | Msa1029240 | 0.806437 | 8.229313e-50 | -8.615850e-47 |
| Msa0233300 | Msa1029240 | 0.804004 | 2.660022e-49 | -8.615850e-47 |
| Msa0390070 | Msa1029240 | 0.811405 | 7.116267e-51 | -8.615850e-47 |
| Msa0402290 | Msa1029240 | 0.805909 | 1.062905e-49 | -8.615850e-47 |
| Msa0424320 | Msa1029240 | 0.804706 | 1.898951e-49 | -8.615850e-47 |
| Msa0435230 | Msa1029240 | 0.808465 | 3.056780e-50 | -8.615850e-47 |
| Msa0440400 | Msa1029240 | 0.822931 | 1.818789e-53 | -8.615850e-47 |
| Msa0444130 | Msa1029240 | 0.839058 | 1.988354e-57 | -8.615850e-47 |
| Msa0479340 | Msa1029240 | 0.811587 | 6.496982e-51 | -8.615850e-47 |
| Msa0998690 | Msa1029240 | 0.809883 | 1.518297e-50 | -8.615850e-47 |
| Msa1000250 | Msa1029240 | 0.804252 | 2.362310e-49 | -8.615850e-47 |
| Msa1000890 | Msa1029240 | 0.801616 | 8.277024e-49 | -8.615850e-47 |
| Msa1000900 | Msa1029240 | 0.808595 | 2.866919e-50 | -8.615850e-47 |
| Msa1014540 | Msa1029240 | 0.821335 | 4.265238e-53 | -8.615850e-47 |
| Msa1029240 | Msa1065570 | 0.859984 | 2.833739e-63 | -8.615850e-47 |
| Msa1029240 | Msa1075650 | 0.817435 | 3.303477e-52 | -8.615850e-47 |
| Msa1029240 | Msa1083840 | 0.824832 | 6.519202e-54 | -8.615850e-47 |
| Msa1029240 | Msa1099970 | 0.803804 | 2.927205e-49 | -8.615850e-47 |
| Msa1029240 | Msa1104090 | 0.811466 | 6.902937e-51 | -8.615850e-47 |
| Msa1029240 | Msa1111150 | 0.876323 | 1.529953e-68 | -8.615850e-47 |
| Msa1029240 | Msa1121480 | 0.823217 | 1.559888e-53 | -8.615850e-47 |
| Msa1029240 | Msa1121490 | 0.838110 | 3.493365e-57 | -8.615850e-47 |
| Msa1029240 | Msa1147740 | 0.801282 | 9.688964e-49 | -8.615850e-47 |
| Msa1029240 | Msa1154730 | 0.825429 | 4.709471e-54 | -8.615850e-47 |
| Msa1029240 | Msa1195190 | 0.803280 | 3.758194e-49 | -8.615850e-47 |
| Msa1029240 | Msa1284680 | 0.834248 | 3.344400e-56 | -8.615850e-47 |
| Msa1029240 | Msa1286800 | 0.808481 | 3.032048e-50 | -8.615850e-47 |
| Msa1029240 | Msa1287190 | 0.808394 | 3.164371e-50 | -8.615850e-47 |
| Msa1029240 | Msa1287370 | -0.803190 | 3.924052e-49 | -8.615850e-47 |
| Msa1029240 | Msa1288560 | 0.806208 | 9.195495e-50 | -8.615850e-47 |
| Msa1029240 | Msa1366810 | 0.803829 | 2.892275e-49 | -8.615850e-47 |
| Msa1029240 | Msa1373030 | 0.814593 | 1.423394e-51 | -8.615850e-47 |
| Msa1029240 | Msa1420820 | 0.813872 | 2.054586e-51 | -8.615850e-47 |
| Msa1029240 | Msa1422180 | 0.820229 | 7.660747e-53 | -8.615850e-47 |
| Msa1029240 | Msa1448640 | 0.811024 | 8.608873e-51 | -8.615850e-47 |
| Msa1029240 | Msa1453320 | 0.815880 | 7.370579e-52 | -8.615850e-47 |
| Msa1029240 | Msa1466540 | 0.816006 | 6.906993e-52 | -8.615850e-47 |
| Msa0251640 | Msa1029240 | 0.803754 | 2.997253e-49 | -8.615850e-47 |
| Msa0270520 | Msa1029240 | 0.804435 | 2.163702e-49 | -8.615850e-47 |
| Msa0275000 | Msa1029240 | 0.810394 | 1.178139e-50 | -8.615850e-47 |
| Msa0278190 | Msa1029240 | 0.805004 | 1.645326e-49 | -8.615850e-47 |
| Msa0288100 | Msa1029240 | 0.804589 | 2.009145e-49 | -8.615850e-47 |
| Msa0321310 | Msa1029240 | 0.823569 | 1.290944e-53 | -8.615850e-47 |
| Msa0355220 | Msa1029240 | 0.800728 | 1.257504e-48 | -8.615850e-47 |
| Msa0502340 | Msa1029240 | 0.800850 | 1.187648e-48 | -8.615850e-47 |
| Msa0545700 | Msa1029240 | 0.802601 | 5.192269e-49 | -8.615850e-47 |
| Msa0598780 | Msa1029240 | 0.806476 | 8.077257e-50 | -8.615850e-47 |
| Msa0848060 | Msa1029240 | 0.828320 | 9.596595e-55 | -8.615850e-47 |
| Msa0858980 | Msa1029240 | 0.806147 | 9.472910e-50 | -8.615850e-47 |
| Msa0861130 | Msa1029240 | 0.813171 | 2.930114e-51 | -8.615850e-47 |
| Msa0897330 | Msa1029240 | 0.808154 | 3.560402e-50 | -8.615850e-47 |
| Msa0899430 | Msa1029240 | 0.818438 | 1.960392e-52 | -8.615850e-47 |
| Msa0899450 | Msa1029240 | 0.814858 | 1.243944e-51 | -8.615850e-47 |
| Msa0907260 | Msa1029240 | 0.817335 | 3.478965e-52 | -8.615850e-47 |
| Msa0927380 | Msa1029240 | 0.806820 | 6.831201e-50 | -8.615850e-47 |
| Msa0935910 | Msa1029240 | 0.813025 | 3.153462e-51 | -8.615850e-47 |
| Msa0942200 | Msa1029240 | 0.804908 | 1.723534e-49 | -8.615850e-47 |
| Msa0956270 | Msa1029240 | 0.802956 | 4.385231e-49 | -8.615850e-47 |
| Msa0958550 | Msa1029240 | 0.814910 | 1.210822e-51 | -8.615850e-47 |
| Msa0976670 | Msa1029240 | 0.808238 | 3.417247e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029240 | MtrunA17_Chr7g0246001 | 69.983 | 603 | 116 | 5 | 129 | 674 | 18 | 612 | 0.0 | 805 |
| Msa1029240 | MtrunA17_Chr7g0245981 | 60.653 | 643 | 142 | 15 | 3 | 559 | 1 | 618 | 0.0 | 624 |
| Msa1029240 | MtrunA17_Chr7g0245991 | 77.778 | 216 | 27 | 1 | 690 | 905 | 1 | 195 | 4.08e-103 | 318 |
| Msa1029240 | MtrunA17_Chr7g0246021 | 70.286 | 175 | 17 | 4 | 84 | 251 | 25 | 171 | 9.42e-67 | 220 |
| Msa1029240 | MtrunA17_Chr7g0246011 | 83.529 | 85 | 14 | 0 | 3 | 87 | 1 | 85 | 1.85e-44 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029240 | AT1G01930.1 | 45.167 | 600 | 215 | 12 | 3 | 519 | 12 | 580 | 1.94e-149 | 454 |
Find 220 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACTTTCAGAAGGTTTA+TGG | 0.142260 | 7_1:+62590908 | Msa1029240:CDS |
| ATTCAAAACGCCGTTGTTTC+GGG | 0.187219 | 7_1:+62588467 | Msa1029240:CDS |
| ACAAATCAAACGACGGAAAT+AGG | 0.190968 | 7_1:-62593446 | None:intergenic |
| TGAGGATTTGAAGAAAATTA+TGG | 0.217654 | 7_1:+62593248 | Msa1029240:CDS |
| TTGTGATTCTTCCATTTCTT+TGG | 0.232877 | 7_1:-62590985 | None:intergenic |
| CAACGAACCTGCATTTAAAA+AGG | 0.243733 | 7_1:+62590220 | Msa1029240:CDS |
| AAAATAGCCAATGATATTCT+TGG | 0.256295 | 7_1:+62592988 | Msa1029240:CDS |
| TATTCAAAACGCCGTTGTTT+CGG | 0.260081 | 7_1:+62588466 | Msa1029240:CDS |
| TTTACTTGGGAAGGTGATTA+TGG | 0.276458 | 7_1:+62592894 | Msa1029240:CDS |
| GTTGGCAAGAGAGGATTTAT+TGG | 0.291660 | 7_1:+62588274 | None:intergenic |
| GTGCAAGAGGTGAAGGAGTC+TGG | 0.303169 | 7_1:+62592823 | Msa1029240:CDS |
| TTTGCTGGTTGTGTCTTTGA+TGG | 0.304286 | 7_1:+62589538 | Msa1029240:CDS |
| AGTTGTAATGGGAGGGGAGG+GGG | 0.316803 | 7_1:-62588305 | None:intergenic |
| TGTAAAGGTTATGGAACTTT+TGG | 0.318449 | 7_1:+62590809 | Msa1029240:CDS |
| AGAGGAGTTCAAGACCTATT+TGG | 0.318952 | 7_1:+62592462 | Msa1029240:CDS |
| TGGTGCTGCTGAAGCAAAAT+TGG | 0.321217 | 7_1:+62592522 | Msa1029240:CDS |
| AACCTTCGCTCTGCTTTACT+TGG | 0.321565 | 7_1:+62592880 | Msa1029240:CDS |
| GTGGCCAATGGCAGCGCTAC+AGG | 0.333066 | 7_1:+62591520 | Msa1029240:CDS |
| AGCGGCTGCATGCGGTTCTA+AGG | 0.338937 | 7_1:+62592660 | Msa1029240:CDS |
| GCATCCGGCAGGCACTTTGC+TGG | 0.342630 | 7_1:+62589523 | Msa1029240:CDS |
| GCAATCCACAACGAAGGATA+TGG | 0.342819 | 7_1:+62593221 | Msa1029240:CDS |
| CATAGGATACTAGGGTCAAC+TGG | 0.349029 | 7_1:-62590722 | None:intergenic |
| CTGTGATGTGTCAAGTATAT+CGG | 0.356631 | 7_1:+62589282 | Msa1029240:CDS |
| TTCTTCCTTCACCTAGGAAA+TGG | 0.359298 | 7_1:+62592686 | Msa1029240:CDS |
| GTTGCTCTCGTCTGCTTCAT+AGG | 0.359473 | 7_1:-62590739 | None:intergenic |
| CGTCTGCTTCATAGGATACT+AGG | 0.361152 | 7_1:-62590731 | None:intergenic |
| AGCTAGAGCAAAAGAATTAG+AGG | 0.361760 | 7_1:+62591278 | Msa1029240:CDS |
| TCTTCCATTTCTTTGGTCAA+TGG | 0.370115 | 7_1:-62590978 | None:intergenic |
| GCAATCGGCTGCGAAGGATA+TGG | 0.370770 | 7_1:+62593158 | Msa1029240:CDS |
| ATGCCATTGTTAGTTGTAAT+GGG | 0.372947 | 7_1:-62588316 | None:intergenic |
| TGGCTTCAAATCTTGACAAA+TGG | 0.380995 | 7_1:+62590928 | Msa1029240:CDS |
| TTGTGGGACGGGAGGTTTGA+TGG | 0.384306 | 7_1:+62592760 | Msa1029240:CDS |
| GGACCAATTTCAACCTGTAC+TGG | 0.385083 | 7_1:+62592915 | Msa1029240:CDS |
| GCAATCCGCAGAAAAGGATA+TGG | 0.394315 | 7_1:+62593347 | Msa1029240:CDS |
| TAGGTGAAACTGACAATTGC+TGG | 0.398898 | 7_1:+62589202 | Msa1029240:intron |
| ATTTCCGTCGTTTGATTTGT+CGG | 0.400918 | 7_1:+62593449 | Msa1029240:CDS |
| CAAATAGAAGCATCAAAATA+AGG | 0.401001 | 7_1:-62590558 | None:intergenic |
| GCAATCCGCAGTGAAGGATA+TGG | 0.401134 | 7_1:+62593284 | Msa1029240:CDS |
| TAGGATGTGAACTTGTTCTA+TGG | 0.402680 | 7_1:-62593427 | None:intergenic |
| AATGGATGCCCTCAAAATTC+CGG | 0.404099 | 7_1:+62592169 | Msa1029240:CDS |
| TTGCCAGCTGCCAACATGTA+TGG | 0.405673 | 7_1:-62590876 | None:intergenic |
| ATCGATGAATATCAGATTTG+AGG | 0.406810 | 7_1:-62588553 | None:intergenic |
| TGACAAGAGTCGAAGAAGTT+TGG | 0.407033 | 7_1:-62588386 | None:intergenic |
| CAGTCAGCCATAGATGCTTC+TGG | 0.409264 | 7_1:+62590158 | Msa1029240:CDS |
| GATCGATGCTGTAGCTTTAG+TGG | 0.411360 | 7_1:+62591474 | Msa1029240:CDS |
| AGTTCTGCCAGAAGCATCTA+TGG | 0.413120 | 7_1:-62590165 | None:intergenic |
| GTCCCAGTACAGGTTGAAAT+TGG | 0.413530 | 7_1:-62592918 | None:intergenic |
| TGAAAATAACAAGGCGTTTG+AGG | 0.414931 | 7_1:+62593092 | Msa1029240:CDS |
| GGCTTCAAATCTTGACAAAT+GGG | 0.418280 | 7_1:+62590929 | Msa1029240:CDS |
| TGGTGATGCTGTAAAGGTTA+TGG | 0.424741 | 7_1:+62590800 | Msa1029240:CDS |
| CTGTCCATTGACCAAAGAAA+TGG | 0.425063 | 7_1:+62590974 | Msa1029240:CDS |
| TTCAAAGGTTGTGCAGCAAT+AGG | 0.429630 | 7_1:-62592631 | None:intergenic |
| GAAAATTATGGATATGTTCA+AGG | 0.433825 | 7_1:+62593260 | Msa1029240:CDS |
| CCAATGAATGTGGTTTAGTC+GGG | 0.436283 | 7_1:+62592231 | Msa1029240:CDS |
| CCCGACTAAACCACATTCAT+TGG | 0.438880 | 7_1:-62592231 | None:intergenic |
| AATGCCATTGTTAGTTGTAA+TGG | 0.445328 | 7_1:-62588317 | None:intergenic |
| ATTGAAGGTAAATAAGAGAT+TGG | 0.447043 | 7_1:+62593029 | Msa1029240:CDS |
| CATATCTCCAAGAATATCAT+TGG | 0.447674 | 7_1:-62592995 | None:intergenic |
| TTGTCCGCAGGCCTACTCTC+AGG | 0.451746 | 7_1:+62590679 | Msa1029240:CDS |
| GTTAGTTGTAATGGGAGGGG+AGG | 0.452204 | 7_1:-62588308 | None:intergenic |
| TAGCTCACAAGACATTTCAT+AGG | 0.452294 | 7_1:+62589572 | Msa1029240:CDS |
| TATGAAGAAACAAATATTGA+AGG | 0.453822 | 7_1:+62593014 | Msa1029240:CDS |
| GGACGGGAGGTTTGATGGAA+TGG | 0.454606 | 7_1:+62592765 | Msa1029240:CDS |
| TTGCTTTCATGTCCCAGTAC+AGG | 0.457106 | 7_1:-62592928 | None:intergenic |
| CCCCTTTCATCTTTAGTGCA+CGG | 0.458211 | 7_1:-62590846 | None:intergenic |
| TTACATCAAGCGGCACAATC+TGG | 0.459372 | 7_1:+62590780 | Msa1029240:CDS |
| CAAATCTTGACAAATGGGAT+TGG | 0.460930 | 7_1:+62590934 | Msa1029240:CDS |
| TGCCAGCTGCCAACATGTAT+GGG | 0.467366 | 7_1:-62590875 | None:intergenic |
| TTAGTTGTAATGGGAGGGGA+GGG | 0.472414 | 7_1:-62588307 | None:intergenic |
| TCCTTCTTAATCCATTTCCT+AGG | 0.472652 | 7_1:-62592697 | None:intergenic |
| TAACAAGGCGTTTGAGGAGG+AGG | 0.472688 | 7_1:+62593098 | Msa1029240:CDS |
| TCGATCTGTGATGCCACAAC+TGG | 0.472726 | 7_1:-62591457 | None:intergenic |
| TGATGAATTACAACAGGAAA+AGG | 0.474258 | 7_1:-62592264 | None:intergenic |
| GTAAAGGAGTTGAGTCTTGT+TGG | 0.475178 | 7_1:-62590761 | None:intergenic |
| AGCAGCTGACGACTGCTTGA+AGG | 0.476047 | 7_1:-62590597 | None:intergenic |
| GCCAATGAATGTGGTTTAGT+CGG | 0.476670 | 7_1:+62592230 | Msa1029240:CDS |
| GAAAATGAGTCTGGTAAATC+CGG | 0.482586 | 7_1:+62589328 | Msa1029240:CDS |
| TTCTCTAGCCTTCGCCAAAT+AGG | 0.482653 | 7_1:-62592476 | None:intergenic |
| GCGTTTGAGGAGGAGGTTGT+TGG | 0.483740 | 7_1:+62593105 | Msa1029240:CDS |
| AGCATGTGATGAATTACAAC+AGG | 0.483814 | 7_1:-62592270 | None:intergenic |
| CTCAGTCGGGTGTTATCCCT+TGG | 0.484250 | 7_1:-62589487 | None:intergenic |
| TAGTTGTAATGGGAGGGGAG+GGG | 0.484633 | 7_1:-62588306 | None:intergenic |
| CTTAACGTGCAATACATGTA+AGG | 0.488119 | 7_1:+62588496 | Msa1029240:CDS |
| ATTTCTAACGCATTGTGGAT+TGG | 0.489031 | 7_1:-62590646 | None:intergenic |
| AGTGTTTCGAAGCGAGGAGA+AGG | 0.490676 | 7_1:-62588416 | None:intergenic |
| GATAACAGTGAAAATGAGTC+TGG | 0.491463 | 7_1:+62589319 | Msa1029240:CDS |
| GATTGTGCCGCTTGATGTAA+AGG | 0.492230 | 7_1:-62590777 | None:intergenic |
| CAAGGGGCAATCCGCAGAAA+AGG | 0.492268 | 7_1:+62593341 | Msa1029240:CDS |
| TGTGATGTGTCAAGTATATC+GGG | 0.492413 | 7_1:+62589283 | Msa1029240:CDS |
| TCCGTGCACTAAAGATGAAA+GGG | 0.494034 | 7_1:+62590845 | Msa1029240:CDS |
| TTGTTCTGCTTGCATCCGGC+AGG | 0.494543 | 7_1:+62589512 | Msa1029240:CDS |
| TTCGTGAACTGCTTACTGCT+TGG | 0.495769 | 7_1:+62590532 | Msa1029240:CDS |
| CAGGGCAAAGAGTTTCTGTC+TGG | 0.497474 | 7_1:+62589389 | Msa1029240:CDS |
| AGGATTGTTCTGCTTGCATC+CGG | 0.498509 | 7_1:+62589508 | Msa1029240:CDS |
| CATTGTGGATTGGTAAAACA+TGG | 0.500416 | 7_1:-62590636 | None:intergenic |
| TTGAACTCCTCTTCATTTAG+CGG | 0.504328 | 7_1:-62592451 | None:intergenic |
| TGCGAAGGATATGGAAATTG+AGG | 0.504454 | 7_1:+62593167 | Msa1029240:CDS |
| AACGAAGGATATGGAAATTG+AGG | 0.505305 | 7_1:+62593230 | Msa1029240:CDS |
| ATCCGCAAGCTCAAGAGAAA+AGG | 0.505901 | 7_1:+62592562 | Msa1029240:CDS |
| CACATGATGCAGAAAGAGAA+AGG | 0.508909 | 7_1:+62592123 | Msa1029240:CDS |
| TCGCTCTGCTTTACTTGGGA+AGG | 0.512764 | 7_1:+62592885 | Msa1029240:CDS |
| GACTGATATAGCATCATTGT+GGG | 0.514669 | 7_1:+62592744 | Msa1029240:CDS |
| ACAATCTGGTGATGCTGTAA+AGG | 0.515510 | 7_1:+62590794 | Msa1029240:CDS |
| CAAGGGGCAATCGGCTGCGA+AGG | 0.516725 | 7_1:+62593152 | Msa1029240:CDS |
| CTCAACTCCTTTACATCAAG+CGG | 0.517214 | 7_1:+62590770 | Msa1029240:CDS |
| ACCCCATACATGTTGGCAGC+TGG | 0.521233 | 7_1:+62590873 | Msa1029240:CDS |
| AGAATCACAAGCTGCTATGA+AGG | 0.521983 | 7_1:+62590998 | Msa1029240:CDS |
| GGCATCCATTCTTCTTTCTG+TGG | 0.522288 | 7_1:-62592156 | None:intergenic |
| AGAAAAGGATATGGAAATTG+AGG | 0.523362 | 7_1:+62593356 | Msa1029240:CDS |
| ATTGTTAGTTGTAATGGGAG+GGG | 0.525723 | 7_1:-62588311 | None:intergenic |
| ATATAGCATCATTGTGGGAC+GGG | 0.528417 | 7_1:+62592749 | Msa1029240:CDS |
| GAAGGTAAATAAGAGATTGG+AGG | 0.529817 | 7_1:+62593032 | Msa1029240:CDS |
| CTTTGACAAAATCAGATGTC+CGG | 0.531523 | 7_1:-62589258 | None:intergenic |
| TGGCCAATGGCAGCGCTACA+GGG | 0.531730 | 7_1:+62591521 | Msa1029240:CDS |
| GCAATATTTCTAACGCATTG+TGG | 0.533539 | 7_1:-62590651 | None:intergenic |
| TTAATCCATTTCCTAGGTGA+AGG | 0.533602 | 7_1:-62592691 | None:intergenic |
| GCCACAGGCTGCTGTGAAAG+TGG | 0.535466 | 7_1:-62591425 | None:intergenic |
| CGCAAGCTCAAGAGAAAAGG+TGG | 0.537712 | 7_1:+62592565 | Msa1029240:CDS |
| GCTATGAAGTCCGTGGTTGA+TGG | 0.538210 | 7_1:+62593480 | Msa1029240:CDS |
| AAAAGATGTGCAAGAGGTGA+AGG | 0.539732 | 7_1:+62592816 | Msa1029240:CDS |
| AGATACGCTCAAGGGGCAAT+CGG | 0.540035 | 7_1:+62593143 | Msa1029240:CDS |
| TAGCCCTGTAGCGCTGCCAT+TGG | 0.541641 | 7_1:-62591524 | None:intergenic |
| CATTGTTAGTTGTAATGGGA+GGG | 0.541964 | 7_1:-62588312 | None:intergenic |
| AGCAGAAGAAAAGAAGGCTC+AGG | 0.542170 | 7_1:+62591311 | Msa1029240:CDS |
| TCTTTAGAAATCGTGGCCAA+TGG | 0.542219 | 7_1:+62591508 | Msa1029240:CDS |
| CTATTCGTCTGTCTTCAGAC+AGG | 0.544458 | 7_1:+62589370 | Msa1029240:CDS |
| GACCAATTTCAACCTGTACT+GGG | 0.545103 | 7_1:+62592916 | Msa1029240:CDS |
| CAAGAGTCGAAGAAGTTTGG+TGG | 0.545207 | 7_1:-62588383 | None:intergenic |
| ACCTAGGAAATGGATTAAGA+AGG | 0.546276 | 7_1:+62592696 | Msa1029240:CDS |
| AATTTCCATATCCTTCGTTG+TGG | 0.546296 | 7_1:-62593226 | None:intergenic |
| ATCCCTTGGCTCAACAATCA+CGG | 0.546967 | 7_1:-62589473 | None:intergenic |
| GGCAGAACTATACATTCTGC+TGG | 0.546994 | 7_1:+62590179 | Msa1029240:CDS |
| ACAGACTGCTCTGACTCAGT+TGG | 0.550586 | 7_1:+62593059 | Msa1029240:CDS |
| TGTTGTAATTCATCACATGC+TGG | 0.551145 | 7_1:+62592272 | Msa1029240:CDS |
| ACGTGAAGCAGAAGAAAAGA+AGG | 0.551389 | 7_1:+62591305 | Msa1029240:CDS |
| AGTGAAGGATATGGAAATTG+AGG | 0.553377 | 7_1:+62593293 | Msa1029240:CDS |
| AAAATTATGGATATGTTCAA+GGG | 0.553528 | 7_1:+62593261 | Msa1029240:CDS |
| GTCTGCTTCATAGGATACTA+GGG | 0.554726 | 7_1:-62590730 | None:intergenic |
| AAATCAAGAAAACTTTCAGA+AGG | 0.554976 | 7_1:+62590901 | Msa1029240:CDS |
| TATTACCATAGGTTGTCAAA+AGG | 0.556049 | 7_1:+62591401 | Msa1029240:intron |
| ATCCGTGCACTAAAGATGAA+AGG | 0.557723 | 7_1:+62590844 | Msa1029240:CDS |
| AGTCGTCAGCTGCTTTATGA+TGG | 0.557894 | 7_1:+62590606 | Msa1029240:CDS |
| GAAGTGGTTGTACTATTAGC+CGG | 0.558364 | 7_1:-62592188 | None:intergenic |
| AATATGATCAACGTGGTTTG+AGG | 0.558368 | 7_1:-62588447 | None:intergenic |
| CTTTCAGAGGCCAATGAATG+TGG | 0.559670 | 7_1:+62592221 | Msa1029240:CDS |
| CACATTCATTGGCCTCTGAA+AGG | 0.559741 | 7_1:-62592220 | None:intergenic |
| AGAGGTGAAGGAGTCTGGGT+TGG | 0.561982 | 7_1:+62592828 | Msa1029240:CDS |
| GTGTTTCGAAGCGAGGAGAA+GGG | 0.562329 | 7_1:-62588415 | None:intergenic |
| TGGCTACTATCAGCCAGTTG+TGG | 0.562563 | 7_1:+62591444 | Msa1029240:CDS |
| ATATGATCAACGTGGTTTGA+GGG | 0.562683 | 7_1:-62588446 | None:intergenic |
| TGGTTGCATTCAGTTCGTCT+CGG | 0.562913 | 7_1:-62592954 | None:intergenic |
| ACCTTCGCTCTGCTTTACTT+GGG | 0.564658 | 7_1:+62592881 | Msa1029240:CDS |
| TGAAAGGCTATTAGCTGAAG+TGG | 0.565476 | 7_1:-62592204 | None:intergenic |
| GGAGAAGTCTTGTGTCCCAA+TGG | 0.565497 | 7_1:+62592717 | Msa1029240:CDS |
| TATGCTGTGAGGGCCAAGGC+CGG | 0.569657 | 7_1:+62590128 | Msa1029240:CDS |
| AAGCAGAACAATCCTCAGTC+GGG | 0.569736 | 7_1:-62589500 | None:intergenic |
| TGTCCGCAGGCCTACTCTCA+GGG | 0.570067 | 7_1:+62590680 | Msa1029240:CDS |
| AATGTCTCCGCTAAATGAAG+AGG | 0.571142 | 7_1:+62592444 | Msa1029240:CDS |
| GAAAAGTATAGATACGCTCA+AGG | 0.571373 | 7_1:+62593323 | Msa1029240:CDS |
| GAAGCAAAATTGGACGTTAG+TGG | 0.573636 | 7_1:+62592532 | Msa1029240:CDS |
| TGCAAGAGGTGAAGGAGTCT+GGG | 0.575522 | 7_1:+62592824 | Msa1029240:CDS |
| CAGATATGCTGTGAGGGCCA+AGG | 0.576082 | 7_1:+62590124 | Msa1029240:intron |
| ATCCGTGATTGTTGAGCCAA+GGG | 0.576904 | 7_1:+62589471 | Msa1029240:CDS |
| CAAGCAGAACAATCCTCAGT+CGG | 0.578649 | 7_1:-62589501 | None:intergenic |
| CAAGGGGCAATCCGCAGTGA+AGG | 0.579960 | 7_1:+62593278 | Msa1029240:CDS |
| AATCCGTGATTGTTGAGCCA+AGG | 0.580800 | 7_1:+62589470 | Msa1029240:CDS |
| GAAAAGTGTAGATACGCTCA+AGG | 0.583889 | 7_1:+62593134 | Msa1029240:CDS |
| AGCTGCCACAGAAAGAAGAA+TGG | 0.586100 | 7_1:+62592151 | Msa1029240:CDS |
| CCATTGTTAGTTGTAATGGG+AGG | 0.589197 | 7_1:-62588313 | None:intergenic |
| GGCTGCATGCGGTTCTAAGG+TGG | 0.589865 | 7_1:+62592663 | Msa1029240:CDS |
| GCAGCCGCTATGTTATTCAA+AGG | 0.590017 | 7_1:-62592646 | None:intergenic |
| AGGTGAAACTGACAATTGCT+GGG | 0.590156 | 7_1:+62589203 | Msa1029240:intron |
| GGTTGAAGTGTTTCGAAGCG+AGG | 0.590259 | 7_1:-62588422 | None:intergenic |
| GCCAGCTGCCAACATGTATG+GGG | 0.592155 | 7_1:-62590874 | None:intergenic |
| AGACTGATATAGCATCATTG+TGG | 0.595329 | 7_1:+62592743 | Msa1029240:CDS |
| GTTCAAGACCTATTTGGCGA+AGG | 0.598442 | 7_1:+62592468 | Msa1029240:CDS |
| CTTATGCAGATATGCTGTGA+GGG | 0.598581 | 7_1:+62590118 | Msa1029240:intron |
| AACTGGCTGATAGTAGCCAC+AGG | 0.599637 | 7_1:-62591440 | None:intergenic |
| AAAAGTATAGATACGCTCAA+GGG | 0.604119 | 7_1:+62593324 | Msa1029240:CDS |
| TTCAGCTAATAGCCTTTCAG+AGG | 0.604540 | 7_1:+62592208 | Msa1029240:CDS |
| CTTCACAAAAGATGTGCAAG+AGG | 0.608648 | 7_1:+62592810 | Msa1029240:CDS |
| ACAACCAGCAAAGTGCCTGC+CGG | 0.610122 | 7_1:-62589527 | None:intergenic |
| AAAAGTGTAGATACGCTCAA+GGG | 0.612472 | 7_1:+62593135 | Msa1029240:CDS |
| GAAAAGCATAGATATGCTCA+AGG | 0.617293 | 7_1:+62593197 | Msa1029240:CDS |
| TAGCATCATTGTGGGACGGG+AGG | 0.618527 | 7_1:+62592752 | Msa1029240:CDS |
| GATATAGCATCATTGTGGGA+CGG | 0.618688 | 7_1:+62592748 | Msa1029240:CDS |
| CAAGCTCAAGAGAAAAGGTG+GGG | 0.619925 | 7_1:+62592567 | Msa1029240:CDS |
| AAAGTATAGATACGCTCAAG+GGG | 0.633488 | 7_1:+62593325 | Msa1029240:CDS |
| TAAGCTAGAACCCGAAACAA+CGG | 0.636405 | 7_1:-62588477 | None:intergenic |
| GGGACGAACCCCATACATGT+TGG | 0.637688 | 7_1:+62590866 | Msa1029240:CDS |
| AACCGCGTCTTTAGAAATCG+TGG | 0.638015 | 7_1:+62591501 | Msa1029240:CDS |
| CTTCCCTGAGAGTAGGCCTG+CGG | 0.639175 | 7_1:-62590683 | None:intergenic |
| CCTCCCATTACAACTAACAA+TGG | 0.639592 | 7_1:+62588313 | Msa1029240:exon |
| ATAGGATACTAGGGTCAACT+GGG | 0.643353 | 7_1:-62590721 | None:intergenic |
| TCCCAAGTAAAGCAGAGCGA+AGG | 0.644285 | 7_1:-62592882 | None:intergenic |
| TCCGTCGTTTGATTTGTCGG+AGG | 0.644378 | 7_1:+62593452 | Msa1029240:CDS |
| ACCACTTTCACAGCAGCCTG+TGG | 0.644722 | 7_1:+62591424 | Msa1029240:CDS |
| GGCTGACGCTATGAAGTCCG+TGG | 0.644824 | 7_1:+62593473 | Msa1029240:CDS |
| TATTCGTCTGTCTTCAGACA+GGG | 0.646496 | 7_1:+62589371 | Msa1029240:CDS |
| CAATGAATGTGGTTTAGTCG+GGG | 0.653073 | 7_1:+62592232 | Msa1029240:CDS |
| GCAAGCTCAAGAGAAAAGGT+GGG | 0.656480 | 7_1:+62592566 | Msa1029240:CDS |
| ATATTGCTATGATTGTCCGC+AGG | 0.657275 | 7_1:+62590667 | Msa1029240:CDS |
| AATAACATAGCGGCTGCATG+CGG | 0.657907 | 7_1:+62592652 | Msa1029240:CDS |
| AAAGTGTAGATACGCTCAAG+GGG | 0.663205 | 7_1:+62593136 | Msa1029240:CDS |
| AGGTGGTTCTTCCTTCACCT+AGG | 0.663668 | 7_1:+62592680 | Msa1029240:CDS |
| AAATTATGGATATGTTCAAG+GGG | 0.664953 | 7_1:+62593262 | Msa1029240:CDS |
| AAATAACAAGGCGTTTGAGG+AGG | 0.669156 | 7_1:+62593095 | Msa1029240:CDS |
| AAGCTCAAGAGAAAAGGTGG+GGG | 0.678103 | 7_1:+62592568 | Msa1029240:CDS |
| CCGTGCACTAAAGATGAAAG+GGG | 0.684903 | 7_1:+62590846 | Msa1029240:CDS |
| TGTTGTGCAATGATGTTCAG+AGG | 0.686426 | 7_1:+62589443 | Msa1029240:CDS |
| TGATCAACGTGGTTTGAGGG+TGG | 0.689448 | 7_1:-62588443 | None:intergenic |
| CAAGGTGCAATCCACAACGA+AGG | 0.693173 | 7_1:+62593215 | Msa1029240:CDS |
| CAAGGGATAACACCCGACTG+AGG | 0.700185 | 7_1:+62589488 | Msa1029240:CDS |
| GCCTCCGACAAATCAAACGA+CGG | 0.707717 | 7_1:-62593453 | None:intergenic |
| TCTTATGCAGATATGCTGTG+AGG | 0.709561 | 7_1:+62590117 | Msa1029240:intron |
| GGCCACGATTTCTAAAGACG+CGG | 0.710050 | 7_1:-62591503 | None:intergenic |
| AAAAGCTAGTGAGATGCTTG+TGG | 0.710178 | 7_1:+62592852 | Msa1029240:CDS |
| GGTTCTGTGTCTGAAAGTGA+CGG | 0.718841 | 7_1:-62592610 | None:intergenic |
| AATTTCCATATCCTTCACTG+CGG | 0.750466 | 7_1:-62593289 | None:intergenic |
| ACAACCTTTGAATAACATAG+CGG | 0.758788 | 7_1:+62592642 | Msa1029240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAATGATTTATGTT+TGG | + | chr7_1:62588980-62588999 | Msa1029240:intron | 10.0% |
| !! | ATAAAAATGAATAAGAAAAT+AGG | - | chr7_1:62590035-62590054 | None:intergenic | 10.0% |
| !!! | TTTTATCTAAAAAAATAAAC+AGG | + | chr7_1:62592085-62592104 | Msa1029240:intron | 10.0% |
| !!! | TTTTATTCAAGCTTTTTTAT+TGG | + | chr7_1:62588652-62588671 | Msa1029240:intron | 15.0% |
| !!! | TTTATTCAAGCTTTTTTATT+GGG | + | chr7_1:62588653-62588672 | Msa1029240:intron | 15.0% |
| !! | GTAAAATAATTGTATATTGA+CGG | + | chr7_1:62588938-62588957 | Msa1029240:intron | 15.0% |
| !! | GAGATTTATACAATAAAATA+TGG | + | chr7_1:62589656-62589675 | Msa1029240:intron | 15.0% |
| !! | ATTTACTGAAAAATTGTAAA+CGG | + | chr7_1:62590068-62590087 | Msa1029240:intron | 15.0% |
| !! | ATCAATTTAGTAATGATAAT+TGG | + | chr7_1:62590357-62590376 | Msa1029240:intron | 15.0% |
| !!! | TGTTTTATATTTTAATCTTC+TGG | + | chr7_1:62592055-62592074 | Msa1029240:intron | 15.0% |
| !! | AACATTACTAATTGATCTTA+TGG | + | chr7_1:62589705-62589724 | Msa1029240:intron | 20.0% |
| !! | ACATTACTAATTGATCTTAT+GGG | + | chr7_1:62589706-62589725 | Msa1029240:intron | 20.0% |
| !!! | TAATAAACCTTTTTAAATGC+AGG | - | chr7_1:62590230-62590249 | None:intergenic | 20.0% |
| !! | ATCATTACTAAATTGATCTT+AGG | - | chr7_1:62590354-62590373 | None:intergenic | 20.0% |
| !! | GTCAAAAATTATGATCAATA+GGG | - | chr7_1:62590383-62590402 | None:intergenic | 20.0% |
| !! | TGTCAAAAATTATGATCAAT+AGG | - | chr7_1:62590384-62590403 | None:intergenic | 20.0% |
| !! | AGAACATTAGTAAGTAAAAT+TGG | - | chr7_1:62590429-62590448 | None:intergenic | 20.0% |
| !! | ATACAGTGAAAACAAATAAA+TGG | - | chr7_1:62591837-62591856 | None:intergenic | 20.0% |
| !!! | AATCAATTGTGTTTTATTGT+TGG | - | chr7_1:62592001-62592020 | None:intergenic | 20.0% |
| !! | TATCTAAAAAAATAAACAGG+AGG | + | chr7_1:62592088-62592107 | Msa1029240:intron | 20.0% |
| !! | AAGAATTACAGAGAAATTAT+GGG | - | chr7_1:62592394-62592413 | None:intergenic | 20.0% |
| !! | AAAGAATTACAGAGAAATTA+TGG | - | chr7_1:62592395-62592414 | None:intergenic | 20.0% |
| !! | TATGAAGAAACAAATATTGA+AGG | + | chr7_1:62593014-62593033 | Msa1029240:CDS | 20.0% |
| !! | AAAATTATGGATATGTTCAA+GGG | + | chr7_1:62593261-62593280 | Msa1029240:CDS | 20.0% |
| ! | CAAGTTAGAATAAATTCTAG+AGG | + | chr7_1:62589091-62589110 | Msa1029240:intron | 25.0% |
| ! | TTATCAAGAACAATGTAAGA+AGG | - | chr7_1:62589168-62589187 | None:intergenic | 25.0% |
| ! | GATAAACTTATGTTGATCAT+AGG | + | chr7_1:62589183-62589202 | Msa1029240:intron | 25.0% |
| ! | TAAATTTCACAATGAGAATG+AGG | + | chr7_1:62589849-62589868 | Msa1029240:intron | 25.0% |
| ! | AAATTTCACAATGAGAATGA+GGG | + | chr7_1:62589850-62589869 | Msa1029240:intron | 25.0% |
| ! | AGGTATGTATGATATGATAT+AGG | - | chr7_1:62589988-62590007 | None:intergenic | 25.0% |
| ! | AAAATAGGAAGATAGGTATT+TGG | - | chr7_1:62590020-62590039 | None:intergenic | 25.0% |
| ! | GAATAAGAAAATAGGAAGAT+AGG | - | chr7_1:62590027-62590046 | None:intergenic | 25.0% |
| ! | TATAAATCTGAACTGACTAT+TGG | + | chr7_1:62590489-62590508 | Msa1029240:intron | 25.0% |
| !!! | CAAATAGAAGCATCAAAATA+AGG | - | chr7_1:62590561-62590580 | None:intergenic | 25.0% |
| ! | AAATCAAGAAAACTTTCAGA+AGG | + | chr7_1:62590901-62590920 | Msa1029240:CDS | 25.0% |
| ! | TAAATGTTATTGGCAGTAAA+AGG | + | chr7_1:62591128-62591147 | Msa1029240:intron | 25.0% |
| ! | AAATGTTATTGGCAGTAAAA+GGG | + | chr7_1:62591129-62591148 | Msa1029240:intron | 25.0% |
| ! | TTAGATTTCTATGTAGTATG+AGG | + | chr7_1:62591348-62591367 | Msa1029240:intron | 25.0% |
| !! | ACACTATATTAGAGTCTTAT+TGG | + | chr7_1:62591696-62591715 | Msa1029240:intron | 25.0% |
| ! | TGCAGTATTTGTAATTAAAC+CGG | - | chr7_1:62592313-62592332 | None:intergenic | 25.0% |
| !!! | GGCTATTTTCAATTTTTCTT+TGG | - | chr7_1:62592977-62592996 | None:intergenic | 25.0% |
| ! | AAAATAGCCAATGATATTCT+TGG | + | chr7_1:62592988-62593007 | Msa1029240:CDS | 25.0% |
| ! | ATTGAAGGTAAATAAGAGAT+TGG | + | chr7_1:62593029-62593048 | Msa1029240:CDS | 25.0% |
| ! | GAAAAAGACTGAAAATAACA+AGG | + | chr7_1:62593083-62593102 | Msa1029240:CDS | 25.0% |
| ! | TGAGGATTTGAAGAAAATTA+TGG | + | chr7_1:62593248-62593267 | Msa1029240:CDS | 25.0% |
| ! | GAAAATTATGGATATGTTCA+AGG | + | chr7_1:62593260-62593279 | Msa1029240:CDS | 25.0% |
| ! | AAATTATGGATATGTTCAAG+GGG | + | chr7_1:62593262-62593281 | Msa1029240:CDS | 25.0% |
| ATGCCATTGTTAGTTGTAAT+GGG | - | chr7_1:62588319-62588338 | None:intergenic | 30.0% | |
| AATGCCATTGTTAGTTGTAA+TGG | - | chr7_1:62588320-62588339 | None:intergenic | 30.0% | |
| ATCGATGAATATCAGATTTG+AGG | - | chr7_1:62588556-62588575 | None:intergenic | 30.0% | |
| TACAAGATGAACATAGTGAA+GGG | - | chr7_1:62588599-62588618 | None:intergenic | 30.0% | |
| TTACAAGATGAACATAGTGA+AGG | - | chr7_1:62588600-62588619 | None:intergenic | 30.0% | |
| !! | AAAACAGATTTTGGTATGCT+TGG | - | chr7_1:62589142-62589161 | None:intergenic | 30.0% |
| ! | AGAAGGCTTAAAACAGATTT+TGG | - | chr7_1:62589151-62589170 | None:intergenic | 30.0% |
| !! | CTTTTGTTTAAAGCTTTCAC+CGG | - | chr7_1:62589350-62589369 | None:intergenic | 30.0% |
| TAGGTATTTGGTCAATTATG+AGG | - | chr7_1:62590008-62590027 | None:intergenic | 30.0% | |
| !! | TCTTAGGAGTTCTAAAGTAT+TGG | - | chr7_1:62590338-62590357 | None:intergenic | 30.0% |
| ! | TGTAAAGGTTATGGAACTTT+TGG | + | chr7_1:62590809-62590828 | Msa1029240:CDS | 30.0% |
| GAAAACTTTCAGAAGGTTTA+TGG | + | chr7_1:62590908-62590927 | Msa1029240:CDS | 30.0% | |
| TTGTGATTCTTCCATTTCTT+TGG | - | chr7_1:62590988-62591007 | None:intergenic | 30.0% | |
| AAGGTGATTCTGATATATCT+AGG | + | chr7_1:62591017-62591036 | Msa1029240:intron | 30.0% | |
| !! | GACTTGCTGATAAATGTTAT+TGG | + | chr7_1:62591118-62591137 | Msa1029240:intron | 30.0% |
| TATTACCATAGGTTGTCAAA+AGG | + | chr7_1:62591401-62591420 | Msa1029240:intron | 30.0% | |
| ! | CTTAGTAACTTCCCTTTTAA+GGG | - | chr7_1:62591572-62591591 | None:intergenic | 30.0% |
| ! | ACTTAGTAACTTCCCTTTTA+AGG | - | chr7_1:62591573-62591592 | None:intergenic | 30.0% |
| !! | CATTTTGGTCACACTAAAAA+GGG | - | chr7_1:62591675-62591694 | None:intergenic | 30.0% |
| ! | CTCTAATATAGTGTGCATTT+TGG | - | chr7_1:62591690-62591709 | None:intergenic | 30.0% |
| !! | TATCAACAGATCTTTAGAAC+TGG | + | chr7_1:62591854-62591873 | Msa1029240:intron | 30.0% |
| ACAGAAGATAAATTGCAGAA+TGG | - | chr7_1:62591950-62591969 | None:intergenic | 30.0% | |
| TGATGAATTACAACAGGAAA+AGG | - | chr7_1:62592267-62592286 | None:intergenic | 30.0% | |
| AGTATTTGTAATTAAACCGG+TGG | - | chr7_1:62592310-62592329 | None:intergenic | 30.0% | |
| !! | CATGTTGTTACTTGTTATGT+AGG | + | chr7_1:62592418-62592437 | Msa1029240:intron | 30.0% |
| !! | AGAGACATAGTTTTGCAATT+TGG | + | chr7_1:62592502-62592521 | Msa1029240:CDS | 30.0% |
| ACAACCTTTGAATAACATAG+CGG | + | chr7_1:62592642-62592661 | Msa1029240:CDS | 30.0% | |
| ! | CTATATCAGTCTTTTCCATT+GGG | - | chr7_1:62592735-62592754 | None:intergenic | 30.0% |
| CATATCTCCAAGAATATCAT+TGG | - | chr7_1:62592998-62593017 | None:intergenic | 30.0% | |
| ! | AAAAGTATAGATACGCTCAA+GGG | + | chr7_1:62593324-62593343 | Msa1029240:CDS | 30.0% |
| ! | AATTTCCATATCCTTTTCTG+CGG | - | chr7_1:62593355-62593374 | None:intergenic | 30.0% |
| AGAAAAGGATATGGAAATTG+AGG | + | chr7_1:62593356-62593375 | Msa1029240:CDS | 30.0% | |
| !! | TTTTGTTATCAAGGTGGTTT+TGG | + | chr7_1:62593399-62593418 | Msa1029240:CDS | 30.0% |
| !!! | TATTAGTTTTCCATCAACCA+CGG | - | chr7_1:62593493-62593512 | None:intergenic | 30.0% |
| ! | ATTGTTAGTTGTAATGGGAG+GGG | - | chr7_1:62588314-62588333 | None:intergenic | 35.0% |
| ! | CATTGTTAGTTGTAATGGGA+GGG | - | chr7_1:62588315-62588334 | None:intergenic | 35.0% |
| ATATGATCAACGTGGTTTGA+GGG | - | chr7_1:62588449-62588468 | None:intergenic | 35.0% | |
| AATATGATCAACGTGGTTTG+AGG | - | chr7_1:62588450-62588469 | None:intergenic | 35.0% | |
| !! | CGTTTTGAATATGATCAACG+TGG | - | chr7_1:62588457-62588476 | None:intergenic | 35.0% |
| TATTCAAAACGCCGTTGTTT+CGG | + | chr7_1:62588466-62588485 | Msa1029240:CDS | 35.0% | |
| CTTAACGTGCAATACATGTA+AGG | + | chr7_1:62588496-62588515 | Msa1029240:CDS | 35.0% | |
| ACATGATTCACAATTCACGT+TGG | + | chr7_1:62588705-62588724 | Msa1029240:intron | 35.0% | |
| ! | GTACTGAATTTTTCTCGTGT+TGG | - | chr7_1:62588742-62588761 | None:intergenic | 35.0% |
| GAGAAAAATTCAGTACGCAT+GGG | + | chr7_1:62588746-62588765 | Msa1029240:intron | 35.0% | |
| AGTACTAAAGCAAACGTGTA+TGG | - | chr7_1:62588782-62588801 | None:intergenic | 35.0% | |
| CACGTTTGCTTTAGTACTAT+AGG | + | chr7_1:62588784-62588803 | Msa1029240:intron | 35.0% | |
| ATGACGTAACAACTCATCAT+TGG | - | chr7_1:62588842-62588861 | None:intergenic | 35.0% | |
| TTGACGTGACAATACATCAT+TGG | + | chr7_1:62588907-62588926 | Msa1029240:intron | 35.0% | |
| AGCATAAAAATCACCACGTT+TGG | + | chr7_1:62589040-62589059 | Msa1029240:intron | 35.0% | |
| ATAAAAATCACCACGTTTGG+AGG | + | chr7_1:62589043-62589062 | Msa1029240:intron | 35.0% | |
| ! | AAACCTGTTCTAAATGAGGA+CGG | + | chr7_1:62589116-62589135 | Msa1029240:intron | 35.0% |
| GAAAAATACTGTGAAGGAAG+AGG | + | chr7_1:62589225-62589244 | Msa1029240:CDS | 35.0% | |
| CTTTGACAAAATCAGATGTC+CGG | - | chr7_1:62589261-62589280 | None:intergenic | 35.0% | |
| CTGTGATGTGTCAAGTATAT+CGG | + | chr7_1:62589282-62589301 | Msa1029240:CDS | 35.0% | |
| TGTGATGTGTCAAGTATATC+GGG | + | chr7_1:62589283-62589302 | Msa1029240:CDS | 35.0% | |
| GATAACAGTGAAAATGAGTC+TGG | + | chr7_1:62589319-62589338 | Msa1029240:CDS | 35.0% | |
| GAAAATGAGTCTGGTAAATC+CGG | + | chr7_1:62589328-62589347 | Msa1029240:CDS | 35.0% | |
| TAGCTCACAAGACATTTCAT+AGG | + | chr7_1:62589572-62589591 | Msa1029240:CDS | 35.0% | |
| AGTTTCTCCAGATAGTTGTT+TGG | + | chr7_1:62589904-62589923 | Msa1029240:intron | 35.0% | |
| AGAAAAGCCAAACAACTATC+TGG | - | chr7_1:62589914-62589933 | None:intergenic | 35.0% | |
| !!! | TATGGCTGACTGTTTTTTTC+CGG | - | chr7_1:62590150-62590169 | None:intergenic | 35.0% |
| CAACGAACCTGCATTTAAAA+AGG | + | chr7_1:62590220-62590239 | Msa1029240:CDS | 35.0% | |
| TATTGGCATGCTCATATTGT+AGG | + | chr7_1:62590506-62590525 | Msa1029240:intron | 35.0% | |
| !! | CATTGTGGATTGGTAAAACA+TGG | - | chr7_1:62590639-62590658 | None:intergenic | 35.0% |
| ATTTCTAACGCATTGTGGAT+TGG | - | chr7_1:62590649-62590668 | None:intergenic | 35.0% | |
| ! | GCAATATTTCTAACGCATTG+TGG | - | chr7_1:62590654-62590673 | None:intergenic | 35.0% |
| !!! | GTTATGGAACTTTTGGAACA+GGG | + | chr7_1:62590816-62590835 | Msa1029240:CDS | 35.0% |
| TGGCTTCAAATCTTGACAAA+TGG | + | chr7_1:62590928-62590947 | Msa1029240:CDS | 35.0% | |
| GGCTTCAAATCTTGACAAAT+GGG | + | chr7_1:62590929-62590948 | Msa1029240:CDS | 35.0% | |
| CAAATCTTGACAAATGGGAT+TGG | + | chr7_1:62590934-62590953 | Msa1029240:CDS | 35.0% | |
| TCTTCCATTTCTTTGGTCAA+TGG | - | chr7_1:62590981-62591000 | None:intergenic | 35.0% | |
| AGCTAGAGCAAAAGAATTAG+AGG | + | chr7_1:62591278-62591297 | Msa1029240:CDS | 35.0% | |
| ! | GGTCTTGTAGATATTACCAT+AGG | + | chr7_1:62591390-62591409 | Msa1029240:intron | 35.0% |
| AACCCTAAATGACCCTTAAA+AGG | + | chr7_1:62591557-62591576 | Msa1029240:intron | 35.0% | |
| ACCCTAAATGACCCTTAAAA+GGG | + | chr7_1:62591558-62591577 | Msa1029240:intron | 35.0% | |
| !! | TCCCTTTTAAGGGTCATTTA+GGG | - | chr7_1:62591562-62591581 | None:intergenic | 35.0% |
| !! | TTCCCTTTTAAGGGTCATTT+AGG | - | chr7_1:62591563-62591582 | None:intergenic | 35.0% |
| !! | GCATTTTGGTCACACTAAAA+AGG | - | chr7_1:62591676-62591695 | None:intergenic | 35.0% |
| ! | ACTATTAGCCGGAATTTTGA+GGG | - | chr7_1:62592180-62592199 | None:intergenic | 35.0% |
| ! | TACTATTAGCCGGAATTTTG+AGG | - | chr7_1:62592181-62592200 | None:intergenic | 35.0% |
| AGCATGTGATGAATTACAAC+AGG | - | chr7_1:62592273-62592292 | None:intergenic | 35.0% | |
| TGTTGTAATTCATCACATGC+TGG | + | chr7_1:62592272-62592291 | Msa1029240:CDS | 35.0% | |
| TTGTAATTAAACCGGTGGAA+AGG | - | chr7_1:62592305-62592324 | None:intergenic | 35.0% | |
| TACATTGTCATCCATCTTCT+AGG | - | chr7_1:62592367-62592386 | None:intergenic | 35.0% | |
| TTGAACTCCTCTTCATTTAG+CGG | - | chr7_1:62592454-62592473 | None:intergenic | 35.0% | |
| TTAATCCATTTCCTAGGTGA+AGG | - | chr7_1:62592694-62592713 | None:intergenic | 35.0% | |
| !! | ACCTAGGAAATGGATTAAGA+AGG | + | chr7_1:62592696-62592715 | Msa1029240:CDS | 35.0% |
| TCCTTCTTAATCCATTTCCT+AGG | - | chr7_1:62592700-62592719 | None:intergenic | 35.0% | |
| ! | GCTATATCAGTCTTTTCCAT+TGG | - | chr7_1:62592736-62592755 | None:intergenic | 35.0% |
| AGACTGATATAGCATCATTG+TGG | + | chr7_1:62592743-62592762 | Msa1029240:CDS | 35.0% | |
| GACTGATATAGCATCATTGT+GGG | + | chr7_1:62592744-62592763 | Msa1029240:CDS | 35.0% | |
| !! | GTTTGATGGAATGGATTTTG+TGG | + | chr7_1:62592774-62592793 | Msa1029240:CDS | 35.0% |
| TTTACTTGGGAAGGTGATTA+TGG | + | chr7_1:62592894-62592913 | Msa1029240:CDS | 35.0% | |
| GAAGGTAAATAAGAGATTGG+AGG | + | chr7_1:62593032-62593051 | Msa1029240:CDS | 35.0% | |
| ! | TGAAAATAACAAGGCGTTTG+AGG | + | chr7_1:62593092-62593111 | Msa1029240:CDS | 35.0% |
| ! | AAAAGTGTAGATACGCTCAA+GGG | + | chr7_1:62593135-62593154 | Msa1029240:CDS | 35.0% |
| ! | GAAAAGCATAGATATGCTCA+AGG | + | chr7_1:62593197-62593216 | Msa1029240:CDS | 35.0% |
| AATTTCCATATCCTTCGTTG+TGG | - | chr7_1:62593229-62593248 | None:intergenic | 35.0% | |
| AACGAAGGATATGGAAATTG+AGG | + | chr7_1:62593230-62593249 | Msa1029240:CDS | 35.0% | |
| AATTTCCATATCCTTCACTG+CGG | - | chr7_1:62593292-62593311 | None:intergenic | 35.0% | |
| AGTGAAGGATATGGAAATTG+AGG | + | chr7_1:62593293-62593312 | Msa1029240:CDS | 35.0% | |
| ! | GAAAAGTATAGATACGCTCA+AGG | + | chr7_1:62593323-62593342 | Msa1029240:CDS | 35.0% |
| AAAGTATAGATACGCTCAAG+GGG | + | chr7_1:62593325-62593344 | Msa1029240:CDS | 35.0% | |
| ! | TAGGATGTGAACTTGTTCTA+TGG | - | chr7_1:62593430-62593449 | None:intergenic | 35.0% |
| ACAAATCAAACGACGGAAAT+AGG | - | chr7_1:62593449-62593468 | None:intergenic | 35.0% | |
| !! | ATTTCCGTCGTTTGATTTGT+CGG | + | chr7_1:62593449-62593468 | Msa1029240:CDS | 35.0% |
| ! | CCATTGTTAGTTGTAATGGG+AGG | - | chr7_1:62588316-62588335 | None:intergenic | 40.0% |
| CCTCCCATTACAACTAACAA+TGG | + | chr7_1:62588313-62588332 | Msa1029240:exon | 40.0% | |
| TGACAAGAGTCGAAGAAGTT+TGG | - | chr7_1:62588389-62588408 | None:intergenic | 40.0% | |
| ! | ATTCAAAACGCCGTTGTTTC+GGG | + | chr7_1:62588467-62588486 | Msa1029240:CDS | 40.0% |
| TAAGCTAGAACCCGAAACAA+CGG | - | chr7_1:62588480-62588499 | None:intergenic | 40.0% | |
| CGAGAAAAATTCAGTACGCA+TGG | + | chr7_1:62588745-62588764 | Msa1029240:intron | 40.0% | |
| AACAACTCATCATTGGATGC+AGG | - | chr7_1:62588835-62588854 | None:intergenic | 40.0% | |
| !! | TTAGCTTTTTCCTCCAAACG+TGG | - | chr7_1:62589056-62589075 | None:intergenic | 40.0% |
| ! | GGCAAAACCTGTTCTAAATG+AGG | + | chr7_1:62589112-62589131 | Msa1029240:intron | 40.0% |
| TAGGTGAAACTGACAATTGC+TGG | + | chr7_1:62589202-62589221 | Msa1029240:intron | 40.0% | |
| AGGTGAAACTGACAATTGCT+GGG | + | chr7_1:62589203-62589222 | Msa1029240:intron | 40.0% | |
| TGCTGGGAAAAATACTGTGA+AGG | + | chr7_1:62589219-62589238 | Msa1029240:CDS | 40.0% | |
| ! | TGTGAAGGAAGAGGATTTTG+AGG | + | chr7_1:62589234-62589253 | Msa1029240:CDS | 40.0% |
| TATTCGTCTGTCTTCAGACA+GGG | + | chr7_1:62589371-62589390 | Msa1029240:CDS | 40.0% | |
| TGTTGTGCAATGATGTTCAG+AGG | + | chr7_1:62589443-62589462 | Msa1029240:CDS | 40.0% | |
| ! | TTTGCTGGTTGTGTCTTTGA+TGG | + | chr7_1:62589538-62589557 | Msa1029240:CDS | 40.0% |
| TCTTATGCAGATATGCTGTG+AGG | + | chr7_1:62590117-62590136 | Msa1029240:intron | 40.0% | |
| CTTATGCAGATATGCTGTGA+GGG | + | chr7_1:62590118-62590137 | Msa1029240:intron | 40.0% | |
| ATATTGCTATGATTGTCCGC+AGG | + | chr7_1:62590667-62590686 | Msa1029240:CDS | 40.0% | |
| ATAGGATACTAGGGTCAACT+GGG | - | chr7_1:62590724-62590743 | None:intergenic | 40.0% | |
| GTCTGCTTCATAGGATACTA+GGG | - | chr7_1:62590733-62590752 | None:intergenic | 40.0% | |
| ! | GTAAAGGAGTTGAGTCTTGT+TGG | - | chr7_1:62590764-62590783 | None:intergenic | 40.0% |
| CTCAACTCCTTTACATCAAG+CGG | + | chr7_1:62590770-62590789 | Msa1029240:CDS | 40.0% | |
| ! | ACAATCTGGTGATGCTGTAA+AGG | + | chr7_1:62590794-62590813 | Msa1029240:CDS | 40.0% |
| ! | TGGTGATGCTGTAAAGGTTA+TGG | + | chr7_1:62590800-62590819 | Msa1029240:CDS | 40.0% |
| !!! | GGTTATGGAACTTTTGGAAC+AGG | + | chr7_1:62590815-62590834 | Msa1029240:CDS | 40.0% |
| ATCCGTGCACTAAAGATGAA+AGG | + | chr7_1:62590844-62590863 | Msa1029240:CDS | 40.0% | |
| TCCGTGCACTAAAGATGAAA+GGG | + | chr7_1:62590845-62590864 | Msa1029240:CDS | 40.0% | |
| CTGTCCATTGACCAAAGAAA+TGG | + | chr7_1:62590974-62590993 | Msa1029240:CDS | 40.0% | |
| AGAATCACAAGCTGCTATGA+AGG | + | chr7_1:62590998-62591017 | Msa1029240:CDS | 40.0% | |
| !!! | TTTTGCTCTAGCTCTTCTCT+TGG | - | chr7_1:62591271-62591290 | None:intergenic | 40.0% |
| ACGTGAAGCAGAAGAAAAGA+AGG | + | chr7_1:62591305-62591324 | Msa1029240:CDS | 40.0% | |
| AGACCTAGAAAACAAACGTG+AGG | - | chr7_1:62591375-62591394 | None:intergenic | 40.0% | |
| ! | TCTTTAGAAATCGTGGCCAA+TGG | + | chr7_1:62591508-62591527 | Msa1029240:CDS | 40.0% |
| AAAGGGAAGTTACTAAGTCG+CGG | + | chr7_1:62591575-62591594 | Msa1029240:intron | 40.0% | |
| CACATGATGCAGAAAGAGAA+AGG | + | chr7_1:62592123-62592142 | Msa1029240:CDS | 40.0% | |
| AATGGATGCCCTCAAAATTC+CGG | + | chr7_1:62592169-62592188 | Msa1029240:CDS | 40.0% | |
| GAAGTGGTTGTACTATTAGC+CGG | - | chr7_1:62592191-62592210 | None:intergenic | 40.0% | |
| TGAAAGGCTATTAGCTGAAG+TGG | - | chr7_1:62592207-62592226 | None:intergenic | 40.0% | |
| TTCAGCTAATAGCCTTTCAG+AGG | + | chr7_1:62592208-62592227 | Msa1029240:CDS | 40.0% | |
| GCCAATGAATGTGGTTTAGT+CGG | + | chr7_1:62592230-62592249 | Msa1029240:CDS | 40.0% | |
| CCAATGAATGTGGTTTAGTC+GGG | + | chr7_1:62592231-62592250 | Msa1029240:CDS | 40.0% | |
| CAATGAATGTGGTTTAGTCG+GGG | + | chr7_1:62592232-62592251 | Msa1029240:CDS | 40.0% | |
| TTCATGCATGCATGTTCACA+AGG | + | chr7_1:62592337-62592356 | Msa1029240:intron | 40.0% | |
| AATGTCTCCGCTAAATGAAG+AGG | + | chr7_1:62592444-62592463 | Msa1029240:CDS | 40.0% | |
| AGAGGAGTTCAAGACCTATT+TGG | + | chr7_1:62592462-62592481 | Msa1029240:CDS | 40.0% | |
| GAAGCAAAATTGGACGTTAG+TGG | + | chr7_1:62592532-62592551 | Msa1029240:CDS | 40.0% | |
| TTCAAAGGTTGTGCAGCAAT+AGG | - | chr7_1:62592634-62592653 | None:intergenic | 40.0% | |
| TTCTTCCTTCACCTAGGAAA+TGG | + | chr7_1:62592686-62592705 | Msa1029240:CDS | 40.0% | |
| GATATAGCATCATTGTGGGA+CGG | + | chr7_1:62592748-62592767 | Msa1029240:CDS | 40.0% | |
| ATATAGCATCATTGTGGGAC+GGG | + | chr7_1:62592749-62592768 | Msa1029240:CDS | 40.0% | |
| CTTCACAAAAGATGTGCAAG+AGG | + | chr7_1:62592810-62592829 | Msa1029240:CDS | 40.0% | |
| AAAAGATGTGCAAGAGGTGA+AGG | + | chr7_1:62592816-62592835 | Msa1029240:CDS | 40.0% | |
| AAAAGCTAGTGAGATGCTTG+TGG | + | chr7_1:62592852-62592871 | Msa1029240:CDS | 40.0% | |
| GACCAATTTCAACCTGTACT+GGG | + | chr7_1:62592916-62592935 | Msa1029240:CDS | 40.0% | |
| ! | AAATAACAAGGCGTTTGAGG+AGG | + | chr7_1:62593095-62593114 | Msa1029240:CDS | 40.0% |
| ! | GAAAAGTGTAGATACGCTCA+AGG | + | chr7_1:62593134-62593153 | Msa1029240:CDS | 40.0% |
| AAAGTGTAGATACGCTCAAG+GGG | + | chr7_1:62593136-62593155 | Msa1029240:CDS | 40.0% | |
| TGCGAAGGATATGGAAATTG+AGG | + | chr7_1:62593167-62593186 | Msa1029240:CDS | 40.0% | |
| !! | GACGCTGCATTTTGTTATCA+AGG | + | chr7_1:62593390-62593409 | Msa1029240:CDS | 40.0% |
| !! | GCTGCATTTTGTTATCAAGG+TGG | + | chr7_1:62593393-62593412 | Msa1029240:CDS | 40.0% |
| !!! | TTATCAAGGTGGTTTTGGCA+AGG | + | chr7_1:62593404-62593423 | Msa1029240:CDS | 40.0% |
| ! | TTAGTTGTAATGGGAGGGGA+GGG | - | chr7_1:62588310-62588329 | None:intergenic | 45.0% |
| CAAGAGTCGAAGAAGTTTGG+TGG | - | chr7_1:62588386-62588405 | None:intergenic | 45.0% | |
| !! | AGGAAGAGGATTTTGAGGAC+CGG | + | chr7_1:62589239-62589258 | Msa1029240:CDS | 45.0% |
| CTATTCGTCTGTCTTCAGAC+AGG | + | chr7_1:62589370-62589389 | Msa1029240:CDS | 45.0% | |
| AATCCGTGATTGTTGAGCCA+AGG | + | chr7_1:62589470-62589489 | Msa1029240:CDS | 45.0% | |
| ATCCGTGATTGTTGAGCCAA+GGG | + | chr7_1:62589471-62589490 | Msa1029240:CDS | 45.0% | |
| ATCCCTTGGCTCAACAATCA+CGG | - | chr7_1:62589476-62589495 | None:intergenic | 45.0% | |
| AAGCAGAACAATCCTCAGTC+GGG | - | chr7_1:62589503-62589522 | None:intergenic | 45.0% | |
| CAAGCAGAACAATCCTCAGT+CGG | - | chr7_1:62589504-62589523 | None:intergenic | 45.0% | |
| AGGATTGTTCTGCTTGCATC+CGG | + | chr7_1:62589508-62589527 | Msa1029240:CDS | 45.0% | |
| TGATATAGGTCATACCGCCT+TGG | - | chr7_1:62589974-62589993 | None:intergenic | 45.0% | |
| !!! | TGACTGTTTTTTTCCGGCCT+TGG | - | chr7_1:62590144-62590163 | None:intergenic | 45.0% |
| !! | AGTTCTGCCAGAAGCATCTA+TGG | - | chr7_1:62590168-62590187 | None:intergenic | 45.0% |
| GGCAGAACTATACATTCTGC+TGG | + | chr7_1:62590179-62590198 | Msa1029240:CDS | 45.0% | |
| TTCGTGAACTGCTTACTGCT+TGG | + | chr7_1:62590532-62590551 | Msa1029240:CDS | 45.0% | |
| ! | AGTCGTCAGCTGCTTTATGA+TGG | + | chr7_1:62590606-62590625 | Msa1029240:CDS | 45.0% |
| CATAGGATACTAGGGTCAAC+TGG | - | chr7_1:62590725-62590744 | None:intergenic | 45.0% | |
| CGTCTGCTTCATAGGATACT+AGG | - | chr7_1:62590734-62590753 | None:intergenic | 45.0% | |
| !! | GATTGTGCCGCTTGATGTAA+AGG | - | chr7_1:62590780-62590799 | None:intergenic | 45.0% |
| TTACATCAAGCGGCACAATC+TGG | + | chr7_1:62590780-62590799 | Msa1029240:CDS | 45.0% | |
| CCCCTTTCATCTTTAGTGCA+CGG | - | chr7_1:62590849-62590868 | None:intergenic | 45.0% | |
| CCGTGCACTAAAGATGAAAG+GGG | + | chr7_1:62590846-62590865 | Msa1029240:CDS | 45.0% | |
| TTGGCAGTAAAAGGGAGACT+AGG | + | chr7_1:62591137-62591156 | Msa1029240:intron | 45.0% | |
| TGGCAGTAAAAGGGAGACTA+GGG | + | chr7_1:62591138-62591157 | Msa1029240:intron | 45.0% | |
| ! | GCCTTCTTTTGTGCATGTAC+AGG | + | chr7_1:62591232-62591251 | Msa1029240:intron | 45.0% |
| GCCTGTACATGCACAAAAGA+AGG | - | chr7_1:62591236-62591255 | None:intergenic | 45.0% | |
| AGCAGAAGAAAAGAAGGCTC+AGG | + | chr7_1:62591311-62591330 | Msa1029240:CDS | 45.0% | |
| !! | GGACCTCACGTTTGTTTTCT+AGG | + | chr7_1:62591369-62591388 | Msa1029240:intron | 45.0% |
| ! | GTGGTCCTTTTGACAACCTA+TGG | - | chr7_1:62591409-62591428 | None:intergenic | 45.0% |
| !! | GATCGATGCTGTAGCTTTAG+TGG | + | chr7_1:62591474-62591493 | Msa1029240:CDS | 45.0% |
| ! | AACCGCGTCTTTAGAAATCG+TGG | + | chr7_1:62591501-62591520 | Msa1029240:CDS | 45.0% |
| ! | TGGGCATTTTACTTCCTAGC+TGG | + | chr7_1:62591610-62591629 | Msa1029240:intron | 45.0% |
| ! | GGGCATTTTACTTCCTAGCT+GGG | + | chr7_1:62591611-62591630 | Msa1029240:intron | 45.0% |
| TGAAGAGAAACCAGAGAGAC+AGG | - | chr7_1:62591652-62591671 | None:intergenic | 45.0% | |
| AGCTGCCACAGAAAGAAGAA+TGG | + | chr7_1:62592151-62592170 | Msa1029240:CDS | 45.0% | |
| GGCATCCATTCTTCTTTCTG+TGG | - | chr7_1:62592159-62592178 | None:intergenic | 45.0% | |
| ! | CACATTCATTGGCCTCTGAA+AGG | - | chr7_1:62592223-62592242 | None:intergenic | 45.0% |
| CTTTCAGAGGCCAATGAATG+TGG | + | chr7_1:62592221-62592240 | Msa1029240:CDS | 45.0% | |
| CCCGACTAAACCACATTCAT+TGG | - | chr7_1:62592234-62592253 | None:intergenic | 45.0% | |
| CTGGTAAAGTTCCTTTCCAC+CGG | + | chr7_1:62592291-62592310 | Msa1029240:intron | 45.0% | |
| CACAAGGAGATCCTAGAAGA+TGG | + | chr7_1:62592353-62592372 | Msa1029240:intron | 45.0% | |
| GTTCAAGACCTATTTGGCGA+AGG | + | chr7_1:62592468-62592487 | Msa1029240:CDS | 45.0% | |
| ! | TTCTCTAGCCTTCGCCAAAT+AGG | - | chr7_1:62592479-62592498 | None:intergenic | 45.0% |
| !! | TGGTGCTGCTGAAGCAAAAT+TGG | + | chr7_1:62592522-62592541 | Msa1029240:CDS | 45.0% |
| ATCCGCAAGCTCAAGAGAAA+AGG | + | chr7_1:62592562-62592581 | Msa1029240:CDS | 45.0% | |
| ! | CACCTTTTCTCTTGAGCTTG+CGG | - | chr7_1:62592567-62592586 | None:intergenic | 45.0% |
| GCAAGCTCAAGAGAAAAGGT+GGG | + | chr7_1:62592566-62592585 | Msa1029240:CDS | 45.0% | |
| CAAGCTCAAGAGAAAAGGTG+GGG | + | chr7_1:62592567-62592586 | Msa1029240:CDS | 45.0% | |
| AAGCTCAAGAGAAAAGGTGG+GGG | + | chr7_1:62592568-62592587 | Msa1029240:CDS | 45.0% | |
| AAAAGGTGGGGGAAACTCAA+AGG | + | chr7_1:62592579-62592598 | Msa1029240:CDS | 45.0% | |
| GGTTCTGTGTCTGAAAGTGA+CGG | - | chr7_1:62592613-62592632 | None:intergenic | 45.0% | |
| GCAGCCGCTATGTTATTCAA+AGG | - | chr7_1:62592649-62592668 | None:intergenic | 45.0% | |
| AATAACATAGCGGCTGCATG+CGG | + | chr7_1:62592652-62592671 | Msa1029240:CDS | 45.0% | |
| AACCTTCGCTCTGCTTTACT+TGG | + | chr7_1:62592880-62592899 | Msa1029240:CDS | 45.0% | |
| ACCTTCGCTCTGCTTTACTT+GGG | + | chr7_1:62592881-62592900 | Msa1029240:CDS | 45.0% | |
| GGACCAATTTCAACCTGTAC+TGG | + | chr7_1:62592915-62592934 | Msa1029240:CDS | 45.0% | |
| ! | GTCCCAGTACAGGTTGAAAT+TGG | - | chr7_1:62592921-62592940 | None:intergenic | 45.0% |
| TTGCTTTCATGTCCCAGTAC+AGG | - | chr7_1:62592931-62592950 | None:intergenic | 45.0% | |
| TGGTTGCATTCAGTTCGTCT+CGG | - | chr7_1:62592957-62592976 | None:intergenic | 45.0% | |
| GCAATCCACAACGAAGGATA+TGG | + | chr7_1:62593221-62593240 | Msa1029240:CDS | 45.0% | |
| GCAATCCGCAGAAAAGGATA+TGG | + | chr7_1:62593347-62593366 | Msa1029240:CDS | 45.0% | |
| ! | TAGTTGTAATGGGAGGGGAG+GGG | - | chr7_1:62588309-62588328 | None:intergenic | 50.0% |
| ! | GTTAGTTGTAATGGGAGGGG+AGG | - | chr7_1:62588311-62588330 | None:intergenic | 50.0% |
| GTGTTTCGAAGCGAGGAGAA+GGG | - | chr7_1:62588418-62588437 | None:intergenic | 50.0% | |
| AGTGTTTCGAAGCGAGGAGA+AGG | - | chr7_1:62588419-62588438 | None:intergenic | 50.0% | |
| ! | GGTTGAAGTGTTTCGAAGCG+AGG | - | chr7_1:62588425-62588444 | None:intergenic | 50.0% |
| TGATCAACGTGGTTTGAGGG+TGG | - | chr7_1:62588446-62588465 | None:intergenic | 50.0% | |
| ! | TGGCCGTCCTCATTTAGAAC+AGG | - | chr7_1:62589122-62589141 | None:intergenic | 50.0% |
| CAGGGCAAAGAGTTTCTGTC+TGG | + | chr7_1:62589389-62589408 | Msa1029240:CDS | 50.0% | |
| ! | TCTTTTTCTTTCCTGCCCCC+AGG | + | chr7_1:62589939-62589958 | Msa1029240:intron | 50.0% |
| CCTTGGAACACAAAACCTGG+GGG | - | chr7_1:62589957-62589976 | None:intergenic | 50.0% | |
| GCCTTGGAACACAAAACCTG+GGG | - | chr7_1:62589958-62589977 | None:intergenic | 50.0% | |
| CGCCTTGGAACACAAAACCT+GGG | - | chr7_1:62589959-62589978 | None:intergenic | 50.0% | |
| !! | CCAGGTTTTGTGTTCCAAGG+CGG | + | chr7_1:62589957-62589976 | Msa1029240:intron | 50.0% |
| CAGTCAGCCATAGATGCTTC+TGG | + | chr7_1:62590158-62590177 | Msa1029240:CDS | 50.0% | |
| ! | CGTTTTGCTTCCCTGAGAGT+AGG | - | chr7_1:62590693-62590712 | None:intergenic | 50.0% |
| GTTGCTCTCGTCTGCTTCAT+AGG | - | chr7_1:62590742-62590761 | None:intergenic | 50.0% | |
| !!! | GGAACTTTTGGAACAGGGCT+TGG | + | chr7_1:62590821-62590840 | Msa1029240:CDS | 50.0% |
| TGCCAGCTGCCAACATGTAT+GGG | - | chr7_1:62590878-62590897 | None:intergenic | 50.0% | |
| TTGCCAGCTGCCAACATGTA+TGG | - | chr7_1:62590879-62590898 | None:intergenic | 50.0% | |
| AACTGGCTGATAGTAGCCAC+AGG | - | chr7_1:62591443-62591462 | None:intergenic | 50.0% | |
| TGGCTACTATCAGCCAGTTG+TGG | + | chr7_1:62591444-62591463 | Msa1029240:CDS | 50.0% | |
| TCGATCTGTGATGCCACAAC+TGG | - | chr7_1:62591460-62591479 | None:intergenic | 50.0% | |
| ! | GGCCACGATTTCTAAAGACG+CGG | - | chr7_1:62591506-62591525 | None:intergenic | 50.0% |
| GGAAGTTACTAAGTCGCGGA+GGG | + | chr7_1:62591579-62591598 | Msa1029240:intron | 50.0% | |
| GAAGTTACTAAGTCGCGGAG+GGG | + | chr7_1:62591580-62591599 | Msa1029240:intron | 50.0% | |
| AAGTTACTAAGTCGCGGAGG+GGG | + | chr7_1:62591581-62591600 | Msa1029240:intron | 50.0% | |
| CGCAAGCTCAAGAGAAAAGG+TGG | + | chr7_1:62592565-62592584 | Msa1029240:CDS | 50.0% | |
| AGGTGGTTCTTCCTTCACCT+AGG | + | chr7_1:62592680-62592699 | Msa1029240:CDS | 50.0% | |
| ! | GGAGAAGTCTTGTGTCCCAA+TGG | + | chr7_1:62592717-62592736 | Msa1029240:CDS | 50.0% |
| TGCAAGAGGTGAAGGAGTCT+GGG | + | chr7_1:62592824-62592843 | Msa1029240:CDS | 50.0% | |
| TCCCAAGTAAAGCAGAGCGA+AGG | - | chr7_1:62592885-62592904 | None:intergenic | 50.0% | |
| TCGCTCTGCTTTACTTGGGA+AGG | + | chr7_1:62592885-62592904 | Msa1029240:CDS | 50.0% | |
| ACAGACTGCTCTGACTCAGT+TGG | + | chr7_1:62593059-62593078 | Msa1029240:CDS | 50.0% | |
| ! | TAACAAGGCGTTTGAGGAGG+AGG | + | chr7_1:62593098-62593117 | Msa1029240:CDS | 50.0% |
| AGATACGCTCAAGGGGCAAT+CGG | + | chr7_1:62593143-62593162 | Msa1029240:CDS | 50.0% | |
| CAAGGTGCAATCCACAACGA+AGG | + | chr7_1:62593215-62593234 | Msa1029240:CDS | 50.0% | |
| GCAATCCGCAGTGAAGGATA+TGG | + | chr7_1:62593284-62593303 | Msa1029240:CDS | 50.0% | |
| !! | TCCGTCGTTTGATTTGTCGG+AGG | + | chr7_1:62593452-62593471 | Msa1029240:CDS | 50.0% |
| GCCTCCGACAAATCAAACGA+CGG | - | chr7_1:62593456-62593475 | None:intergenic | 50.0% | |
| GCTATGAAGTCCGTGGTTGA+TGG | + | chr7_1:62593480-62593499 | Msa1029240:CDS | 50.0% | |
| ! | AGTTGTAATGGGAGGGGAGG+GGG | - | chr7_1:62588308-62588327 | None:intergenic | 55.0% |
| ! | CTCAGTCGGGTGTTATCCCT+TGG | - | chr7_1:62589490-62589509 | None:intergenic | 55.0% |
| CAAGGGATAACACCCGACTG+AGG | + | chr7_1:62589488-62589507 | Msa1029240:CDS | 55.0% | |
| TTGTTCTGCTTGCATCCGGC+AGG | + | chr7_1:62589512-62589531 | Msa1029240:CDS | 55.0% | |
| ! | ACAACCAGCAAAGTGCCTGC+CGG | - | chr7_1:62589530-62589549 | None:intergenic | 55.0% |
| !! | CCCCCAGGTTTTGTGTTCCA+AGG | + | chr7_1:62589954-62589973 | Msa1029240:intron | 55.0% |
| CCGCCTTGGAACACAAAACC+TGG | - | chr7_1:62589960-62589979 | None:intergenic | 55.0% | |
| CAGATATGCTGTGAGGGCCA+AGG | + | chr7_1:62590124-62590143 | Msa1029240:intron | 55.0% | |
| AGCAGCTGACGACTGCTTGA+AGG | - | chr7_1:62590600-62590619 | None:intergenic | 55.0% | |
| GGGACGAACCCCATACATGT+TGG | + | chr7_1:62590866-62590885 | Msa1029240:CDS | 55.0% | |
| ACCCCATACATGTTGGCAGC+TGG | + | chr7_1:62590873-62590892 | Msa1029240:CDS | 55.0% | |
| GCCAGCTGCCAACATGTATG+GGG | - | chr7_1:62590877-62590896 | None:intergenic | 55.0% | |
| ACCACTTTCACAGCAGCCTG+TGG | + | chr7_1:62591424-62591443 | Msa1029240:CDS | 55.0% | |
| GGGAAGTTACTAAGTCGCGG+AGG | + | chr7_1:62591578-62591597 | Msa1029240:intron | 55.0% | |
| AGTTACTAAGTCGCGGAGGG+GGG | + | chr7_1:62591582-62591601 | Msa1029240:intron | 55.0% | |
| CATCTGGCAACCTGTCTCTC+TGG | + | chr7_1:62591639-62591658 | Msa1029240:intron | 55.0% | |
| AGGTGGGGGAAACTCAAAGG+AGG | + | chr7_1:62592582-62592601 | Msa1029240:CDS | 55.0% | |
| GGTGGGGGAAACTCAAAGGA+GGG | + | chr7_1:62592583-62592602 | Msa1029240:CDS | 55.0% | |
| GTGGGGGAAACTCAAAGGAG+GGG | + | chr7_1:62592584-62592603 | Msa1029240:CDS | 55.0% | |
| TAGCATCATTGTGGGACGGG+AGG | + | chr7_1:62592752-62592771 | Msa1029240:CDS | 55.0% | |
| TTGTGGGACGGGAGGTTTGA+TGG | + | chr7_1:62592760-62592779 | Msa1029240:CDS | 55.0% | |
| GGACGGGAGGTTTGATGGAA+TGG | + | chr7_1:62592765-62592784 | Msa1029240:CDS | 55.0% | |
| GTGCAAGAGGTGAAGGAGTC+TGG | + | chr7_1:62592823-62592842 | Msa1029240:CDS | 55.0% | |
| AGAGGTGAAGGAGTCTGGGT+TGG | + | chr7_1:62592828-62592847 | Msa1029240:CDS | 55.0% | |
| GCGTTTGAGGAGGAGGTTGT+TGG | + | chr7_1:62593105-62593124 | Msa1029240:CDS | 55.0% | |
| GCAATCGGCTGCGAAGGATA+TGG | + | chr7_1:62593158-62593177 | Msa1029240:CDS | 55.0% | |
| CAAGGGGCAATCCGCAGAAA+AGG | + | chr7_1:62593341-62593360 | Msa1029240:CDS | 55.0% | |
| AATGGGAGGGGAGGGGGATT+AGG | - | chr7_1:62588302-62588321 | None:intergenic | 60.0% | |
| GGAACACAAAACCTGGGGGC+AGG | - | chr7_1:62589953-62589972 | None:intergenic | 60.0% | |
| TATGCTGTGAGGGCCAAGGC+CGG | + | chr7_1:62590128-62590147 | Msa1029240:CDS | 60.0% | |
| TTGTCCGCAGGCCTACTCTC+AGG | + | chr7_1:62590679-62590698 | Msa1029240:CDS | 60.0% | |
| TGTCCGCAGGCCTACTCTCA+GGG | + | chr7_1:62590680-62590699 | Msa1029240:CDS | 60.0% | |
| CTTCCCTGAGAGTAGGCCTG+CGG | - | chr7_1:62590686-62590705 | None:intergenic | 60.0% | |
| GCCACAGGCTGCTGTGAAAG+TGG | - | chr7_1:62591428-62591447 | None:intergenic | 60.0% | |
| TGGCCAATGGCAGCGCTACA+GGG | + | chr7_1:62591521-62591540 | Msa1029240:CDS | 60.0% | |
| TAGCCCTGTAGCGCTGCCAT+TGG | - | chr7_1:62591527-62591546 | None:intergenic | 60.0% | |
| GTTACTAAGTCGCGGAGGGG+GGG | + | chr7_1:62591583-62591602 | Msa1029240:intron | 60.0% | |
| TCCTAGCTGGGCTGAGCATC+TGG | + | chr7_1:62591623-62591642 | Msa1029240:intron | 60.0% | |
| AGCGGCTGCATGCGGTTCTA+AGG | + | chr7_1:62592660-62592679 | Msa1029240:CDS | 60.0% | |
| !! | GGCTGCATGCGGTTCTAAGG+TGG | + | chr7_1:62592663-62592682 | Msa1029240:CDS | 60.0% |
| CAAGGGGCAATCCGCAGTGA+AGG | + | chr7_1:62593278-62593297 | Msa1029240:CDS | 60.0% | |
| GGCTGACGCTATGAAGTCCG+TGG | + | chr7_1:62593473-62593492 | Msa1029240:CDS | 60.0% | |
| GCATCCGGCAGGCACTTTGC+TGG | + | chr7_1:62589523-62589542 | Msa1029240:CDS | 65.0% | |
| GTGGCCAATGGCAGCGCTAC+AGG | + | chr7_1:62591520-62591539 | Msa1029240:CDS | 65.0% | |
| ! | AGTCGCGGAGGGGGGGATTT+TGG | + | chr7_1:62591590-62591609 | Msa1029240:intron | 65.0% |
| ! | GTCGCGGAGGGGGGGATTTT+GGG | + | chr7_1:62591591-62591610 | Msa1029240:intron | 65.0% |
| GCCAGATGCTCAGCCCAGCT+AGG | - | chr7_1:62591627-62591646 | None:intergenic | 65.0% | |
| CAAGGGGCAATCGGCTGCGA+AGG | + | chr7_1:62593152-62593171 | Msa1029240:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 62588281 | 62593515 | 62588281 | ID=Msa1029240;Name=Msa1029240 |
| chr7_1 | mRNA | 62588281 | 62593515 | 62588281 | ID=Msa1029240-mRNA-1;Parent=Msa1029240;Name=Msa1029240-mRNA-1;_AED=0.14;_eAED=0.17;_QI=51|0.57|0.37|1|1|1|8|0|905 |
| chr7_1 | exon | 62588281 | 62588580 | 62588281 | ID=Msa1029240-mRNA-1:exon:13443;Parent=Msa1029240-mRNA-1 |
| chr7_1 | exon | 62589205 | 62589593 | 62589205 | ID=Msa1029240-mRNA-1:exon:13444;Parent=Msa1029240-mRNA-1 |
| chr7_1 | exon | 62590127 | 62590241 | 62590127 | ID=Msa1029240-mRNA-1:exon:13445;Parent=Msa1029240-mRNA-1 |
| chr7_1 | exon | 62590528 | 62591019 | 62590528 | ID=Msa1029240-mRNA-1:exon:13446;Parent=Msa1029240-mRNA-1 |
| chr7_1 | exon | 62591258 | 62591332 | 62591258 | ID=Msa1029240-mRNA-1:exon:13447;Parent=Msa1029240-mRNA-1 |
| chr7_1 | exon | 62591412 | 62591546 | 62591412 | ID=Msa1029240-mRNA-1:exon:13448;Parent=Msa1029240-mRNA-1 |
| chr7_1 | exon | 62592107 | 62592293 | 62592107 | ID=Msa1029240-mRNA-1:exon:13449;Parent=Msa1029240-mRNA-1 |
| chr7_1 | exon | 62592440 | 62593515 | 62592440 | ID=Msa1029240-mRNA-1:exon:13450;Parent=Msa1029240-mRNA-1 |
| chr7_1 | five_prime_UTR | 62588281 | 62588331 | 62588281 | ID=Msa1029240-mRNA-1:five_prime_utr;Parent=Msa1029240-mRNA-1 |
| chr7_1 | CDS | 62588332 | 62588580 | 62588332 | ID=Msa1029240-mRNA-1:cds;Parent=Msa1029240-mRNA-1 |
| chr7_1 | CDS | 62589205 | 62589593 | 62589205 | ID=Msa1029240-mRNA-1:cds;Parent=Msa1029240-mRNA-1 |
| chr7_1 | CDS | 62590127 | 62590241 | 62590127 | ID=Msa1029240-mRNA-1:cds;Parent=Msa1029240-mRNA-1 |
| chr7_1 | CDS | 62590528 | 62591019 | 62590528 | ID=Msa1029240-mRNA-1:cds;Parent=Msa1029240-mRNA-1 |
| chr7_1 | CDS | 62591258 | 62591332 | 62591258 | ID=Msa1029240-mRNA-1:cds;Parent=Msa1029240-mRNA-1 |
| chr7_1 | CDS | 62591412 | 62591546 | 62591412 | ID=Msa1029240-mRNA-1:cds;Parent=Msa1029240-mRNA-1 |
| chr7_1 | CDS | 62592107 | 62592293 | 62592107 | ID=Msa1029240-mRNA-1:cds;Parent=Msa1029240-mRNA-1 |
| chr7_1 | CDS | 62592440 | 62593515 | 62592440 | ID=Msa1029240-mRNA-1:cds;Parent=Msa1029240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
