AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1111150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111150 MtrunA17_Chr7g0246001 69.983 603 116 5 129 674 18 612 0.0 804
Msa1111150 MtrunA17_Chr7g0245981 60.498 643 143 15 3 559 1 618 0.0 623
Msa1111150 MtrunA17_Chr7g0245991 70.042 237 29 1 690 926 1 195 3.52e-98 305
Msa1111150 MtrunA17_Chr7g0246021 69.714 175 18 4 84 251 25 171 5.38e-66 218
Msa1111150 MtrunA17_Chr7g0246011 83.529 85 14 0 3 87 1 85 1.87e-44 155
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111150 AT1G01930.1 45.000 600 216 12 3 519 12 580 1.30e-148 452

Find 227 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAACTTTCAGAAGGTTTA+TGG 0.142260 7_3:-56833966 Msa1111150:CDS
ATTCAAAACGCCGTTGTTTC+GGG 0.187219 7_3:-56836689 Msa1111150:CDS
ACAAATCAAACGACGGAAAT+AGG 0.190968 7_3:+56831361 None:intergenic
TGAGGATTTGAATAAAATTA+TGG 0.201682 7_3:-56831622 Msa1111150:CDS
TTGTGATTCTTCCATTTCTT+TGG 0.232877 7_3:+56833889 None:intergenic
CAACGAACCTGCATTTAAAA+AGG 0.243733 7_3:-56834654 Msa1111150:intron
AAAATAGCCAATGATATTCT+TGG 0.256295 7_3:-56831882 Msa1111150:CDS
TATTCAAAACGCCGTTGTTT+CGG 0.260081 7_3:-56836690 Msa1111150:CDS
TTTACTTGGGAAGGTGATTA+TGG 0.276458 7_3:-56831976 Msa1111150:CDS
GTTGGCAAGAGAGGATTTAT+TGG 0.291660 7_3:-56836882 None:intergenic
GTGCAAGAGGTGAAGGAGTC+TGG 0.303169 7_3:-56832047 Msa1111150:CDS
TTTGCTGGTTGTGTCTTTGA+TGG 0.304286 7_3:-56835336 Msa1111150:CDS
AGTTGTAATGGGAGGGGAGG+GGG 0.316803 7_3:+56836851 None:intergenic
TGTAAAGGTTATGGAACTTT+TGG 0.318449 7_3:-56834065 Msa1111150:CDS
AGAGGAGTTCAAGACCTATT+TGG 0.318952 7_3:-56832408 Msa1111150:CDS
TGGTGCTGCTGAAGCAAAAT+TGG 0.321217 7_3:-56832348 Msa1111150:CDS
AACCTTCGCTCTGCTTTACT+TGG 0.321565 7_3:-56831990 Msa1111150:CDS
GTGGCCAATGGCAGCGCTAC+AGG 0.333066 7_3:-56833354 Msa1111150:CDS
AGCGGCTGCATGCGGTTCTA+AGG 0.338937 7_3:-56832210 Msa1111150:CDS
GCATCCGGCAGGCACTTTGC+TGG 0.342630 7_3:-56835351 Msa1111150:CDS
GCAATCCACAACGAAGGATA+TGG 0.342819 7_3:-56831649 Msa1111150:CDS
CATAGGATACTAGGGTCAAC+TGG 0.349029 7_3:+56834152 None:intergenic
TTCTTCCTTCACCTAGGAAA+TGG 0.359298 7_3:-56832184 Msa1111150:CDS
GTTGCTCTCGTCTGCTTCAT+AGG 0.359473 7_3:+56834135 None:intergenic
CGTCTGCTTCATAGGATACT+AGG 0.361152 7_3:+56834143 None:intergenic
AGCTAGAGCAAAAGAATTAG+AGG 0.361760 7_3:-56833596 Msa1111150:CDS
TCTTCCATTTCTTTGGTCAA+TGG 0.370115 7_3:+56833896 None:intergenic
GCAATCGGCTGCGAAGGATA+TGG 0.370770 7_3:-56831712 Msa1111150:CDS
ATGCCATTGTTAGTTGTAAT+GGG 0.372947 7_3:+56836840 None:intergenic
TGGCTTCAAATCTTGACAAA+TGG 0.380995 7_3:-56833946 Msa1111150:CDS
TTGTGGGACGGGAGGTTTGA+TGG 0.384306 7_3:-56832110 Msa1111150:CDS
GGACCAATTTCAACCTGTAC+TGG 0.385083 7_3:-56831955 Msa1111150:CDS
GCAATCCGCAGAAAAGGATA+TGG 0.394315 7_3:-56831460 Msa1111150:CDS
CTGTGATGTGTCATGTATAT+CGG 0.396574 7_3:-56835592 Msa1111150:CDS
TAGGTGAAACTGACAATTGC+TGG 0.398898 7_3:-56835672 Msa1111150:CDS
ATTTCCGTCGTTTGATTTGT+CGG 0.400918 7_3:-56831358 Msa1111150:CDS
CAAATAGAAGCATCAAAATA+AGG 0.401001 7_3:+56834316 None:intergenic
GCAATCCGCAGTGAAGGATA+TGG 0.401134 7_3:-56831523 Msa1111150:CDS
GCAATCCGCAGTGAAGGATA+TGG 0.401134 7_3:-56831586 Msa1111150:CDS
TAGGATGTGAACTTGTTCTA+TGG 0.402680 7_3:+56831380 None:intergenic
AATGGATGCCCTCAAAATTC+CGG 0.404099 7_3:-56832705 Msa1111150:CDS
TTGCCAGCTGCCAACATGTA+TGG 0.405673 7_3:+56833998 None:intergenic
ATCGATGAATATCAGATTTG+AGG 0.406810 7_3:+56836603 None:intergenic
TGACAAGAGTCGAAGAAGTT+TGG 0.407033 7_3:+56836770 None:intergenic
CAGTCAGCCATAGATGCTTC+TGG 0.409264 7_3:-56834716 Msa1111150:CDS
GATCGATGCTGTAGCTTTAG+TGG 0.411360 7_3:-56833400 Msa1111150:CDS
AGTTCTGCCAGAAGCATCTA+TGG 0.413120 7_3:+56834709 None:intergenic
GTCCCAGTACAGGTTGAAAT+TGG 0.413530 7_3:+56831952 None:intergenic
TGAAAATAACAAGGCGTTTG+AGG 0.414931 7_3:-56831778 Msa1111150:CDS
GGCTTCAAATCTTGACAAAT+GGG 0.418280 7_3:-56833945 Msa1111150:CDS
TGGTGATGCTGTAAAGGTTA+TGG 0.424741 7_3:-56834074 Msa1111150:CDS
CTGTCCATTGACCAAAGAAA+TGG 0.425063 7_3:-56833900 Msa1111150:CDS
TTCAAAGGTTGTGCAGCAAT+AGG 0.429630 7_3:+56832239 None:intergenic
TAAAATTATGGATATGTTCA+AGG 0.430174 7_3:-56831610 Msa1111150:CDS
CCAATGAATGTGGTTTAGTC+GGG 0.436283 7_3:-56832643 Msa1111150:CDS
CCCGACTAAACCACATTCAT+TGG 0.438880 7_3:+56832643 None:intergenic
AATGCCATTGTTAGTTGTAA+TGG 0.445328 7_3:+56836839 None:intergenic
ATTGAAGGTAAATAAGAGAT+TGG 0.447043 7_3:-56831841 Msa1111150:CDS
CATATCTCCAAGAATATCAT+TGG 0.447674 7_3:+56831875 None:intergenic
TTGTCCGCAGGCCTACTCTC+AGG 0.451746 7_3:-56834195 Msa1111150:CDS
GTTAGTTGTAATGGGAGGGG+AGG 0.452204 7_3:+56836848 None:intergenic
TAGCTCACAAGACATTTCAT+AGG 0.452294 7_3:-56835302 Msa1111150:intron
TATGAAGAAACAAATATTGA+AGG 0.453822 7_3:-56831856 Msa1111150:CDS
GGACGGGAGGTTTGATGGAA+TGG 0.454606 7_3:-56832105 Msa1111150:CDS
TTGCTTTCATGTCCCAGTAC+AGG 0.457106 7_3:+56831942 None:intergenic
CCCCTTTCATCTTTAGTGCA+CGG 0.458211 7_3:+56834028 None:intergenic
TTACATCAAGCGGCACAATC+TGG 0.459372 7_3:-56834094 Msa1111150:CDS
CAAATCTTGACAAATGGGAT+TGG 0.460930 7_3:-56833940 Msa1111150:CDS
TGCCAGCTGCCAACATGTAT+GGG 0.467366 7_3:+56833999 None:intergenic
TTAGTTGTAATGGGAGGGGA+GGG 0.472414 7_3:+56836849 None:intergenic
TCCTTCTTAATCCATTTCCT+AGG 0.472652 7_3:+56832173 None:intergenic
TAACAAGGCGTTTGAGGAGG+AGG 0.472688 7_3:-56831772 Msa1111150:CDS
TCGATCTGTGATGCCACAAC+TGG 0.472726 7_3:+56833417 None:intergenic
TGATGAATTACAACAGGAAA+AGG 0.474258 7_3:+56832610 None:intergenic
GTAAAGGAGTTGAGTCTTGT+TGG 0.475178 7_3:+56834113 None:intergenic
AGCAGCTGACGACTGCTTGA+AGG 0.476047 7_3:+56834277 None:intergenic
GCCAATGAATGTGGTTTAGT+CGG 0.476670 7_3:-56832644 Msa1111150:CDS
GAAAATGAGTCTGGTAAATC+CGG 0.482586 7_3:-56835546 Msa1111150:CDS
TTCTCTAGCCTTCGCCAAAT+AGG 0.482653 7_3:+56832394 None:intergenic
GCGTTTGAGGAGGAGGTTGT+TGG 0.483740 7_3:-56831765 Msa1111150:CDS
AGCATGTGATGAATTACAAC+AGG 0.483814 7_3:+56832604 None:intergenic
CTCAGTCGGGTGTTATCCCT+TGG 0.484250 7_3:+56835387 None:intergenic
TAGTTGTAATGGGAGGGGAG+GGG 0.484633 7_3:+56836850 None:intergenic
CTTAACGTGCAATACATGTA+AGG 0.488119 7_3:-56836660 Msa1111150:CDS
ATTTCTAACGCATTGTGGAT+TGG 0.489031 7_3:+56834228 None:intergenic
AGTGTTTCGAAGCGAGGAGA+AGG 0.490676 7_3:+56836740 None:intergenic
GATAACAGTGAAAATGAGTC+TGG 0.491463 7_3:-56835555 Msa1111150:CDS
GATTGTGCCGCTTGATGTAA+AGG 0.492230 7_3:+56834097 None:intergenic
CAAGGGGCAATCCGCAGAAA+AGG 0.492268 7_3:-56831466 Msa1111150:CDS
TCCGTGCACTAAAGATGAAA+GGG 0.494034 7_3:-56834029 Msa1111150:CDS
TTGTTCTGCTTGCATCCGGC+AGG 0.494543 7_3:-56835362 Msa1111150:CDS
TTCGTGAACTGCTTACTGCT+TGG 0.495769 7_3:-56834342 Msa1111150:CDS
CAGGGCAAAGAGTTTCTGTC+TGG 0.497474 7_3:-56835485 Msa1111150:CDS
AGGATTGTTCTGCTTGCATC+CGG 0.498509 7_3:-56835366 Msa1111150:CDS
CATTGTGGATTGGTAAAACA+TGG 0.500416 7_3:+56834238 None:intergenic
TTGAACTCCTCTTCATTTAG+CGG 0.504328 7_3:+56832419 None:intergenic
TGCGAAGGATATGGAAATTG+AGG 0.504454 7_3:-56831703 Msa1111150:CDS
TATGCTGTGAGGGCCAAGGC+TGG 0.505054 7_3:-56834746 Msa1111150:CDS
AACGAAGGATATGGAAATTG+AGG 0.505305 7_3:-56831640 Msa1111150:CDS
ATCCGCAAGCTCAAGAGAAA+AGG 0.505901 7_3:-56832308 Msa1111150:CDS
CACATGATGCAGAAAGAGAA+AGG 0.508909 7_3:-56832751 Msa1111150:CDS
TCGCTCTGCTTTACTTGGGA+AGG 0.512764 7_3:-56831985 Msa1111150:CDS
GACTGATATAGCATCATTGT+GGG 0.514669 7_3:-56832126 Msa1111150:CDS
ACAATCTGGTGATGCTGTAA+AGG 0.515510 7_3:-56834080 Msa1111150:CDS
CAAGGGGCAATCGGCTGCGA+AGG 0.516725 7_3:-56831718 Msa1111150:CDS
CTCAACTCCTTTACATCAAG+CGG 0.517214 7_3:-56834104 Msa1111150:CDS
ACCCCATACATGTTGGCAGC+TGG 0.521233 7_3:-56834001 Msa1111150:CDS
AGAATCACAAGCTGCTATGA+AGG 0.521983 7_3:-56833876 Msa1111150:intron
GGCATCCATTCTTCTTTCTG+TGG 0.522288 7_3:+56832718 None:intergenic
AGAAAAGGATATGGAAATTG+AGG 0.523362 7_3:-56831451 Msa1111150:CDS
ATTGTTAGTTGTAATGGGAG+GGG 0.525723 7_3:+56836845 None:intergenic
ATATAGCATCATTGTGGGAC+GGG 0.528417 7_3:-56832121 Msa1111150:CDS
GAAGGTAAATAAGAGATTGG+AGG 0.529817 7_3:-56831838 Msa1111150:CDS
CTTTGACAAAATCAGATGTC+CGG 0.531523 7_3:+56835616 None:intergenic
TGGCCAATGGCAGCGCTACA+GGG 0.531730 7_3:-56833353 Msa1111150:CDS
GCAATATTTCTAACGCATTG+TGG 0.533539 7_3:+56834223 None:intergenic
TTAATCCATTTCCTAGGTGA+AGG 0.533602 7_3:+56832179 None:intergenic
TGTGATGTGTCATGTATATC+GGG 0.534074 7_3:-56835591 Msa1111150:CDS
GCCACAGGCTGCTGTGAAAG+TGG 0.535466 7_3:+56833449 None:intergenic
CGCAAGCTCAAGAGAAAAGG+TGG 0.537712 7_3:-56832305 Msa1111150:CDS
GCTATGAAGTCCGTGGTTGA+TGG 0.538210 7_3:-56831327 Msa1111150:CDS
AAAAGATGTGCAAGAGGTGA+AGG 0.539732 7_3:-56832054 Msa1111150:CDS
AGATACGCTCAAGGGGCAAT+CGG 0.540035 7_3:-56831727 Msa1111150:CDS
TAGCCCTGTAGCGCTGCCAT+TGG 0.541641 7_3:+56833350 None:intergenic
CATTGTTAGTTGTAATGGGA+GGG 0.541964 7_3:+56836844 None:intergenic
AGCAGAAGAAAAGAAGGCTC+AGG 0.542170 7_3:-56833563 Msa1111150:intron
TCTTTAGAAATCGTGGCCAA+TGG 0.542219 7_3:-56833366 Msa1111150:CDS
CTATTCGTCTGTCTTCAGAC+AGG 0.544458 7_3:-56835504 Msa1111150:CDS
GACCAATTTCAACCTGTACT+GGG 0.545103 7_3:-56831954 Msa1111150:CDS
CAAGAGTCGAAGAAGTTTGG+TGG 0.545207 7_3:+56836773 None:intergenic
ACCTAGGAAATGGATTAAGA+AGG 0.546276 7_3:-56832174 Msa1111150:CDS
AATTTCCATATCCTTCGTTG+TGG 0.546296 7_3:+56831644 None:intergenic
ATCCCTTGGCTCAACAATCA+CGG 0.546967 7_3:+56835401 None:intergenic
GGCAGAACTATACATTCTGC+TGG 0.546994 7_3:-56834695 Msa1111150:CDS
AAAATTATGGATATGTTCAA+GGG 0.549877 7_3:-56831609 Msa1111150:CDS
ACACACTGCTCTGACTCAGT+TGG 0.550586 7_3:-56831811 Msa1111150:CDS
TGTTGTAATTCATCACATGC+TGG 0.551145 7_3:-56832602 Msa1111150:intron
ACGTGAAGCAGAAGAAAAGA+AGG 0.551389 7_3:-56833569 Msa1111150:CDS
AGTGAAGGATATGGAAATTG+AGG 0.553377 7_3:-56831514 Msa1111150:CDS
AGTGAAGGATATGGAAATTG+AGG 0.553377 7_3:-56831577 Msa1111150:CDS
GTCTGCTTCATAGGATACTA+GGG 0.554726 7_3:+56834144 None:intergenic
AAATCAAGAAAACTTTCAGA+AGG 0.554976 7_3:-56833973 Msa1111150:CDS
TATTACCATAGGTTGTCAAA+AGG 0.556049 7_3:-56833473 Msa1111150:intron
ATCCGTGCACTAAAGATGAA+AGG 0.557723 7_3:-56834030 Msa1111150:CDS
AGTCGTCAGCTGCTTTATGA+TGG 0.557894 7_3:-56834268 Msa1111150:CDS
GAAGTGGTTGTACTATTAGC+CGG 0.558364 7_3:+56832686 None:intergenic
AATATGATCAACGTGGTTTG+AGG 0.558368 7_3:+56836709 None:intergenic
CTTTCAGAGGCCAATGAATG+TGG 0.559670 7_3:-56832653 Msa1111150:CDS
CACATTCATTGGCCTCTGAA+AGG 0.559741 7_3:+56832654 None:intergenic
AGAGGTGAAGGAGTCTGGGT+TGG 0.561982 7_3:-56832042 Msa1111150:CDS
GTGTTTCGAAGCGAGGAGAA+GGG 0.562329 7_3:+56836741 None:intergenic
TGGCTACTATCAGCCAGTTG+TGG 0.562563 7_3:-56833430 Msa1111150:CDS
ATATGATCAACGTGGTTTGA+GGG 0.562683 7_3:+56836710 None:intergenic
TGGTTGCATTCAGTTCGTCT+CGG 0.562913 7_3:+56831916 None:intergenic
ACCTTCGCTCTGCTTTACTT+GGG 0.564658 7_3:-56831989 Msa1111150:CDS
TGAAAGGCTATTAGCTGAAG+TGG 0.565476 7_3:+56832670 None:intergenic
GGAGAAGTCTTGTGTCCCAA+TGG 0.565497 7_3:-56832153 Msa1111150:CDS
AAGCAGAACAATCCTCAGTC+GGG 0.569736 7_3:+56835374 None:intergenic
TGTCCGCAGGCCTACTCTCA+GGG 0.570067 7_3:-56834194 Msa1111150:CDS
AATGTCTCCGCTAAATGAAG+AGG 0.571142 7_3:-56832426 Msa1111150:CDS
GAAAAGTATAGATACGCTCA+AGG 0.571373 7_3:-56831484 Msa1111150:CDS
GAAAAGTATAGATACGCTCA+AGG 0.571373 7_3:-56831547 Msa1111150:CDS
GAAGCAAAATTGGACGTTAG+TGG 0.573636 7_3:-56832338 Msa1111150:CDS
TGCAAGAGGTGAAGGAGTCT+GGG 0.575522 7_3:-56832046 Msa1111150:CDS
ATCCGTGATTGTTGAGCCAA+GGG 0.576904 7_3:-56835403 Msa1111150:CDS
CAAGCAGAACAATCCTCAGT+CGG 0.578649 7_3:+56835373 None:intergenic
CAAGGGGCAATCCGCAGTGA+AGG 0.579960 7_3:-56831529 Msa1111150:CDS
CAAGGGGCAATCCGCAGTGA+AGG 0.579960 7_3:-56831592 Msa1111150:CDS
AATCCGTGATTGTTGAGCCA+AGG 0.580800 7_3:-56835404 Msa1111150:CDS
GAAAAGTGTAGATACGCTCA+AGG 0.583889 7_3:-56831736 Msa1111150:CDS
AGCTGCCACAGAAAGAAGAA+TGG 0.586100 7_3:-56832723 Msa1111150:CDS
CCATTGTTAGTTGTAATGGG+AGG 0.589197 7_3:+56836843 None:intergenic
GGCTGCATGCGGTTCTAAGG+TGG 0.589865 7_3:-56832207 Msa1111150:CDS
GCAGCCGCTATGTTATTCAA+AGG 0.590017 7_3:+56832224 None:intergenic
AGGTGAAACTGACAATTGCT+GGG 0.590156 7_3:-56835671 Msa1111150:CDS
GGTTGAAGTGTTTCGAAGCG+AGG 0.590259 7_3:+56836734 None:intergenic
GCCAGCTGCCAACATGTATG+GGG 0.592155 7_3:+56834000 None:intergenic
AGACTGATATAGCATCATTG+TGG 0.595329 7_3:-56832127 Msa1111150:CDS
GTTCAAGACCTATTTGGCGA+AGG 0.598442 7_3:-56832402 Msa1111150:CDS
CTTATGCAGATATGCTGTGA+GGG 0.598581 7_3:-56834756 Msa1111150:intron
AACTGGCTGATAGTAGCCAC+AGG 0.599637 7_3:+56833434 None:intergenic
AAAAGTATAGATACGCTCAA+GGG 0.604119 7_3:-56831483 Msa1111150:CDS
AAAAGTATAGATACGCTCAA+GGG 0.604119 7_3:-56831546 Msa1111150:CDS
TTCAGCTAATAGCCTTTCAG+AGG 0.604540 7_3:-56832666 Msa1111150:CDS
CAGATATGCTGTGAGGGCCA+AGG 0.607085 7_3:-56834750 Msa1111150:CDS
CTTCACAAAAGATGTGCAAG+AGG 0.608648 7_3:-56832060 Msa1111150:CDS
ACAACCAGCAAAGTGCCTGC+CGG 0.610122 7_3:+56835347 None:intergenic
AAAAGTGTAGATACGCTCAA+GGG 0.612472 7_3:-56831735 Msa1111150:CDS
GAAAAGCATAGATATGCTCA+AGG 0.617293 7_3:-56831673 Msa1111150:CDS
TAGCATCATTGTGGGACGGG+AGG 0.618527 7_3:-56832118 Msa1111150:CDS
GATATAGCATCATTGTGGGA+CGG 0.618688 7_3:-56832122 Msa1111150:CDS
CAAGCTCAAGAGAAAAGGTG+GGG 0.619925 7_3:-56832303 Msa1111150:CDS
AAAGTATAGATACGCTCAAG+GGG 0.633488 7_3:-56831482 Msa1111150:CDS
AAAGTATAGATACGCTCAAG+GGG 0.633488 7_3:-56831545 Msa1111150:CDS
TAAGCTAGAACCCGAAACAA+CGG 0.636405 7_3:+56836679 None:intergenic
GGGACGAACCCCATACATGT+TGG 0.637688 7_3:-56834008 Msa1111150:CDS
AACCGCGTCTTTAGAAATCG+TGG 0.638015 7_3:-56833373 Msa1111150:CDS
CTTCCCTGAGAGTAGGCCTG+CGG 0.639175 7_3:+56834191 None:intergenic
CCTCCCATTACAACTAACAA+TGG 0.639592 7_3:-56836843 Msa1111150:exon
AAATTATGGATATGTTCAAG+GGG 0.641969 7_3:-56831608 Msa1111150:CDS
ATAGGATACTAGGGTCAACT+GGG 0.643353 7_3:+56834153 None:intergenic
TCCCAAGTAAAGCAGAGCGA+AGG 0.644285 7_3:+56831988 None:intergenic
TCCGTCGTTTGATTTGTCGG+AGG 0.644378 7_3:-56831355 Msa1111150:CDS
ACCACTTTCACAGCAGCCTG+TGG 0.644722 7_3:-56833450 Msa1111150:CDS
GGCTGACGCTATGAAGTCCG+TGG 0.644824 7_3:-56831334 Msa1111150:CDS
TATTCGTCTGTCTTCAGACA+GGG 0.646496 7_3:-56835503 Msa1111150:CDS
CAATGAATGTGGTTTAGTCG+GGG 0.653073 7_3:-56832642 Msa1111150:CDS
GCAAGCTCAAGAGAAAAGGT+GGG 0.656480 7_3:-56832304 Msa1111150:CDS
ATATTGCTATGATTGTCCGC+AGG 0.657275 7_3:-56834207 Msa1111150:CDS
AATAACATAGCGGCTGCATG+CGG 0.657907 7_3:-56832218 Msa1111150:CDS
AAAGTGTAGATACGCTCAAG+GGG 0.663205 7_3:-56831734 Msa1111150:CDS
AGGTGGTTCTTCCTTCACCT+AGG 0.663668 7_3:-56832190 Msa1111150:CDS
AAATAACAAGGCGTTTGAGG+AGG 0.669156 7_3:-56831775 Msa1111150:CDS
AAGCTCAAGAGAAAAGGTGG+GGG 0.678103 7_3:-56832302 Msa1111150:CDS
CCGTGCACTAAAGATGAAAG+GGG 0.684903 7_3:-56834028 Msa1111150:CDS
TGTTGTGCAATGATGTTCAG+AGG 0.686426 7_3:-56835431 Msa1111150:CDS
TGATCAACGTGGTTTGAGGG+TGG 0.689448 7_3:+56836713 None:intergenic
CAAGGTGCAATCCACAACGA+AGG 0.693173 7_3:-56831655 Msa1111150:CDS
CAAGGGATAACACCCGACTG+AGG 0.700185 7_3:-56835386 Msa1111150:CDS
GCCTCCGACAAATCAAACGA+CGG 0.707717 7_3:+56831354 None:intergenic
TCTTATGCAGATATGCTGTG+AGG 0.709561 7_3:-56834757 Msa1111150:intron
GGCCACGATTTCTAAAGACG+CGG 0.710050 7_3:+56833371 None:intergenic
AAAAGCTAGTGAGATGCTTG+TGG 0.710178 7_3:-56832018 Msa1111150:CDS
GGTTCTGTGTCTGAAAGTGA+CGG 0.718841 7_3:+56832260 None:intergenic
AATTTCCATATCCTTCACTG+CGG 0.750466 7_3:+56831518 None:intergenic
AATTTCCATATCCTTCACTG+CGG 0.750466 7_3:+56831581 None:intergenic
ACAACCTTTGAATAACATAG+CGG 0.758788 7_3:-56832228 Msa1111150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTATTTTTTTTTTATGAA+AGG + chr7_3:56832083-56832102 None:intergenic 10.0%
!! TAATTTCTTGATAAAATTTA+AGG - chr7_3:56832168-56832187 Msa1111150:CDS 10.0%
!! AATTTCTTGATAAAATTTAA+GGG - chr7_3:56832169-56832188 Msa1111150:CDS 10.0%
!!! AATTTAAAATGATTTATGTT+TGG - chr7_3:56832295-56832314 Msa1111150:CDS 10.0%
!! ATAAAAATGAATAAGAAAAT+AGG + chr7_3:56833350-56833369 None:intergenic 10.0%
!!! TTTTATCTAAAAAAATAAAC+AGG - chr7_3:56835400-56835419 Msa1111150:CDS 10.0%
!!! TTTTATTCAAGCTTTTTTAT+TGG - chr7_3:56831685-56831704 Msa1111150:CDS 15.0%
!!! TTTATTCAAGCTTTTTTATT+GGG - chr7_3:56831686-56831705 Msa1111150:CDS 15.0%
!! TAAATAAGATTGAAATCTAA+GGG + chr7_3:56832056-56832075 None:intergenic 15.0%
!! ATAAATAAGATTGAAATCTA+AGG + chr7_3:56832057-56832076 None:intergenic 15.0%
!!! TCGTTACTAAATATTTTAAA+AGG - chr7_3:56832924-56832943 Msa1111150:intron 15.0%
!! GAGATTTATACAATAAAATA+TGG - chr7_3:56832971-56832990 Msa1111150:intron 15.0%
!! ATTTACTGAAAAATTGTAAA+CGG - chr7_3:56833383-56833402 Msa1111150:CDS 15.0%
!! ATCAATTTAGTAATGATAAT+TGG - chr7_3:56833672-56833691 Msa1111150:intron 15.0%
!!! TGTTTTATATTTTAATCTTC+TGG - chr7_3:56835370-56835389 Msa1111150:CDS 15.0%
!! AACATTACTAATTGATCTTA+TGG - chr7_3:56833020-56833039 Msa1111150:intron 20.0%
!! ACATTACTAATTGATCTTAT+GGG - chr7_3:56833021-56833040 Msa1111150:intron 20.0%
!!! TAATAAACCTTTTTAAATGC+AGG + chr7_3:56833545-56833564 None:intergenic 20.0%
!! ATCATTACTAAATTGATCTT+AGG + chr7_3:56833669-56833688 None:intergenic 20.0%
!! GTCAAAAATTATGATCAATA+GGG + chr7_3:56833698-56833717 None:intergenic 20.0%
!! TGTCAAAAATTATGATCAAT+AGG + chr7_3:56833699-56833718 None:intergenic 20.0%
!! AGAACATTAGTAAGTAAAAT+TGG + chr7_3:56833744-56833763 None:intergenic 20.0%
!! ATACAGTGAAAACAAATAAA+TGG + chr7_3:56835152-56835171 None:intergenic 20.0%
!!! AATCAATTCTGTTTTATTGT+TGG + chr7_3:56835316-56835335 None:intergenic 20.0%
!! TATCTAAAAAAATAAACAGG+AGG - chr7_3:56835403-56835422 Msa1111150:CDS 20.0%
!! AAGAATTACAGAGAAATTAT+GGG + chr7_3:56835713-56835732 None:intergenic 20.0%
!! AAAGAATTACAGAGAAATTA+TGG + chr7_3:56835714-56835733 None:intergenic 20.0%
!! TATGAAGAAACAAATATTGA+AGG - chr7_3:56836333-56836352 Msa1111150:intron 20.0%
!! TGAGGATTTGAATAAAATTA+TGG - chr7_3:56836567-56836586 Msa1111150:intron 20.0%
!! TAAAATTATGGATATGTTCA+AGG - chr7_3:56836579-56836598 Msa1111150:intron 20.0%
!! AAAATTATGGATATGTTCAA+GGG - chr7_3:56836580-56836599 Msa1111150:intron 20.0%
! AGAAAATTTCAAGAATGACA+TGG + chr7_3:56832206-56832225 None:intergenic 25.0%
! TTGCTCTAATTGTATATTGA+CGG - chr7_3:56832253-56832272 Msa1111150:CDS 25.0%
! CAAGTTAGAATAAATTCTAG+AGG - chr7_3:56832406-56832425 Msa1111150:CDS 25.0%
! TTATCAAGAACAATGTAAGA+AGG + chr7_3:56832483-56832502 None:intergenic 25.0%
! GATAAACTTATGTTGATCAT+AGG - chr7_3:56832498-56832517 Msa1111150:intron 25.0%
! TAAATTTCACAATGAGAATG+AGG - chr7_3:56833164-56833183 Msa1111150:intron 25.0%
! AAATTTCACAATGAGAATGA+GGG - chr7_3:56833165-56833184 Msa1111150:intron 25.0%
! AGGTATGTATGATATGATAT+AGG + chr7_3:56833303-56833322 None:intergenic 25.0%
! AAAATAGGAAGATAGGTATT+TGG + chr7_3:56833335-56833354 None:intergenic 25.0%
! GAATAAGAAAATAGGAAGAT+AGG + chr7_3:56833342-56833361 None:intergenic 25.0%
! TATAAATCTGAACTGACTAT+TGG - chr7_3:56833804-56833823 Msa1111150:intron 25.0%
!!! CAAATAGAAGCATCAAAATA+AGG + chr7_3:56833876-56833895 None:intergenic 25.0%
! AAATCAAGAAAACTTTCAGA+AGG - chr7_3:56834216-56834235 Msa1111150:CDS 25.0%
! TAAATGTTATTGGCAGTAAA+AGG - chr7_3:56834443-56834462 Msa1111150:intron 25.0%
! AAATGTTATTGGCAGTAAAA+GGG - chr7_3:56834444-56834463 Msa1111150:intron 25.0%
! TTAGATTTCTATGTAGTATG+AGG - chr7_3:56834663-56834682 Msa1111150:CDS 25.0%
!! ACACTATATTAGAGTCTTAT+TGG - chr7_3:56835010-56835029 Msa1111150:intron 25.0%
! TGCAGTATTTGTAATTAAAC+CGG + chr7_3:56835628-56835647 None:intergenic 25.0%
! ATTGAAGGTAAATAAGAGAT+TGG - chr7_3:56836348-56836367 Msa1111150:intron 25.0%
! GAAAAAGACTGAAAATAACA+AGG - chr7_3:56836402-56836421 Msa1111150:intron 25.0%
! AAATTATGGATATGTTCAAG+GGG - chr7_3:56836581-56836600 Msa1111150:intron 25.0%
ATGCCATTGTTAGTTGTAAT+GGG + chr7_3:56831352-56831371 None:intergenic 30.0%
AATGCCATTGTTAGTTGTAA+TGG + chr7_3:56831353-56831372 None:intergenic 30.0%
ATCGATGAATATCAGATTTG+AGG + chr7_3:56831589-56831608 None:intergenic 30.0%
TACAAGATGAACATAGTGAA+GGG + chr7_3:56831632-56831651 None:intergenic 30.0%
TTACAAGATGAACATAGTGA+AGG + chr7_3:56831633-56831652 None:intergenic 30.0%
GCATGCGTAAAATAATTGTA+TGG - chr7_3:56831965-56831984 Msa1111150:CDS 30.0%
AGAAAGATTCAAGAATGACA+TGG - chr7_3:56832019-56832038 Msa1111150:CDS 30.0%
!! AAAACAGATTTTGGTATGCT+TGG + chr7_3:56832457-56832476 None:intergenic 30.0%
! AGAAGGCTTAAAACAGATTT+TGG + chr7_3:56832466-56832485 None:intergenic 30.0%
!! CTTTTGTTTAAAGCTTTCAC+CGG + chr7_3:56832665-56832684 None:intergenic 30.0%
TAGGTATTTGGTCAATTATG+AGG + chr7_3:56833323-56833342 None:intergenic 30.0%
!! TCTTAGGAGTTCTAAAGTAT+TGG + chr7_3:56833653-56833672 None:intergenic 30.0%
! TGTAAAGGTTATGGAACTTT+TGG - chr7_3:56834124-56834143 Msa1111150:CDS 30.0%
GAAAACTTTCAGAAGGTTTA+TGG - chr7_3:56834223-56834242 Msa1111150:CDS 30.0%
TTGTGATTCTTCCATTTCTT+TGG + chr7_3:56834303-56834322 None:intergenic 30.0%
AAGGTGATTCTGATATATCT+AGG - chr7_3:56834332-56834351 Msa1111150:CDS 30.0%
!! GACTTGCTGATAAATGTTAT+TGG - chr7_3:56834433-56834452 Msa1111150:intron 30.0%
TATTACCATAGGTTGTCAAA+AGG - chr7_3:56834716-56834735 Msa1111150:CDS 30.0%
! CTTAGTAACTTCCCTTTTAA+GGG + chr7_3:56834887-56834906 None:intergenic 30.0%
! ACTTAGTAACTTCCCTTTTA+AGG + chr7_3:56834888-56834907 None:intergenic 30.0%
!! CATTTTGGTCACACTAAAAA+GGG + chr7_3:56834989-56835008 None:intergenic 30.0%
! CTCTAATATAGTGTGCATTT+TGG + chr7_3:56835004-56835023 None:intergenic 30.0%
!! TATCAACAGATCTTTAGAAC+TGG - chr7_3:56835169-56835188 Msa1111150:intron 30.0%
ACAGAAGATAAATTGCAGAA+TGG + chr7_3:56835265-56835284 None:intergenic 30.0%
TGATGAATTACAACAGGAAA+AGG + chr7_3:56835582-56835601 None:intergenic 30.0%
AGTATTTGTAATTAAACCGG+TGG + chr7_3:56835625-56835644 None:intergenic 30.0%
TTGTCATCCATCTTAATTCT+AGG + chr7_3:56835682-56835701 None:intergenic 30.0%
!! CATGTTGTTACTTGTTATGT+AGG - chr7_3:56835737-56835756 Msa1111150:intron 30.0%
!! AGAGACATAGTTTTGCAATT+TGG - chr7_3:56835821-56835840 Msa1111150:intron 30.0%
ACAACCTTTGAATAACATAG+CGG - chr7_3:56835961-56835980 Msa1111150:intron 30.0%
! CTATATCAGTCTTTTCCATT+GGG + chr7_3:56836054-56836073 None:intergenic 30.0%
CATATCTCCAAGAATATCAT+TGG + chr7_3:56836317-56836336 None:intergenic 30.0%
! AAAAGTATAGATACGCTCAA+GGG - chr7_3:56836643-56836662 Msa1111150:CDS 30.0%
! AAAAGTATAGATACGCTCAA+GGG - chr7_3:56836643-56836662 Msa1111150:CDS 30.0%
! AATTTCCATATCCTTTTCTG+CGG + chr7_3:56836737-56836756 None:intergenic 30.0%
AGAAAAGGATATGGAAATTG+AGG - chr7_3:56836738-56836757 Msa1111150:CDS 30.0%
! TTATCAAGGTGGTTTTTACA+AGG - chr7_3:56836786-56836805 Msa1111150:CDS 30.0%
!!! TATTAGTTTTCCATCAACCA+CGG + chr7_3:56836875-56836894 None:intergenic 30.0%
! ATTGTTAGTTGTAATGGGAG+GGG + chr7_3:56831347-56831366 None:intergenic 35.0%
! CATTGTTAGTTGTAATGGGA+GGG + chr7_3:56831348-56831367 None:intergenic 35.0%
ATATGATCAACGTGGTTTGA+GGG + chr7_3:56831482-56831501 None:intergenic 35.0%
AATATGATCAACGTGGTTTG+AGG + chr7_3:56831483-56831502 None:intergenic 35.0%
!! CGTTTTGAATATGATCAACG+TGG + chr7_3:56831490-56831509 None:intergenic 35.0%
TATTCAAAACGCCGTTGTTT+CGG - chr7_3:56831499-56831518 Msa1111150:CDS 35.0%
CTTAACGTGCAATACATGTA+AGG - chr7_3:56831529-56831548 Msa1111150:CDS 35.0%
ACATGATTCACAATTCACGT+TGG - chr7_3:56831738-56831757 Msa1111150:CDS 35.0%
! GTACTGAATTTTTCTCGTGT+TGG + chr7_3:56831775-56831794 None:intergenic 35.0%
GAGAAAAATTCAGTACGCAT+GGG - chr7_3:56831779-56831798 Msa1111150:CDS 35.0%
AGTACTAAAGCAAACGTGTA+TGG + chr7_3:56831815-56831834 None:intergenic 35.0%
CACGTTTGCTTTAGTACTAT+AGG - chr7_3:56831817-56831836 Msa1111150:CDS 35.0%
ATGACGTAACAACTCATCAT+TGG + chr7_3:56831875-56831894 None:intergenic 35.0%
TTGACGTGACAATACATCAT+TGG - chr7_3:56831940-56831959 Msa1111150:CDS 35.0%
TAGCCAATAAAATCTCAACC+TGG + chr7_3:56832133-56832152 None:intergenic 35.0%
AGCATAAAAATCACCACGTT+TGG - chr7_3:56832355-56832374 Msa1111150:CDS 35.0%
ATAAAAATCACCACGTTTGG+AGG - chr7_3:56832358-56832377 Msa1111150:CDS 35.0%
! AAACCTGTTCTAAATGAGGA+CGG - chr7_3:56832431-56832450 Msa1111150:CDS 35.0%
GAAAAATACTGTGAAGGAAG+AGG - chr7_3:56832540-56832559 Msa1111150:intron 35.0%
CTTTGACAAAATCAGATGTC+CGG + chr7_3:56832576-56832595 None:intergenic 35.0%
CTGTGATGTGTCATGTATAT+CGG - chr7_3:56832597-56832616 Msa1111150:intron 35.0%
TGTGATGTGTCATGTATATC+GGG - chr7_3:56832598-56832617 Msa1111150:intron 35.0%
GATAACAGTGAAAATGAGTC+TGG - chr7_3:56832634-56832653 Msa1111150:CDS 35.0%
GAAAATGAGTCTGGTAAATC+CGG - chr7_3:56832643-56832662 Msa1111150:CDS 35.0%
TAGCTCACAAGACATTTCAT+AGG - chr7_3:56832887-56832906 Msa1111150:intron 35.0%
AGTTTCTCCAGATAGTTGTT+TGG - chr7_3:56833219-56833238 Msa1111150:intron 35.0%
AGAAAAGCCAAACAACTATC+TGG + chr7_3:56833229-56833248 None:intergenic 35.0%
CAACGAACCTGCATTTAAAA+AGG - chr7_3:56833535-56833554 Msa1111150:intron 35.0%
TATTGGCATGCTCATATTGT+AGG - chr7_3:56833821-56833840 Msa1111150:intron 35.0%
!! CATTGTGGATTGGTAAAACA+TGG + chr7_3:56833954-56833973 None:intergenic 35.0%
ATTTCTAACGCATTGTGGAT+TGG + chr7_3:56833964-56833983 None:intergenic 35.0%
! GCAATATTTCTAACGCATTG+TGG + chr7_3:56833969-56833988 None:intergenic 35.0%
!!! GTTATGGAACTTTTGGAACA+GGG - chr7_3:56834131-56834150 Msa1111150:CDS 35.0%
TGGCTTCAAATCTTGACAAA+TGG - chr7_3:56834243-56834262 Msa1111150:CDS 35.0%
GGCTTCAAATCTTGACAAAT+GGG - chr7_3:56834244-56834263 Msa1111150:CDS 35.0%
CAAATCTTGACAAATGGGAT+TGG - chr7_3:56834249-56834268 Msa1111150:CDS 35.0%
TCTTCCATTTCTTTGGTCAA+TGG + chr7_3:56834296-56834315 None:intergenic 35.0%
AGCTAGAGCAAAAGAATTAG+AGG - chr7_3:56834593-56834612 Msa1111150:intron 35.0%
! GGTCTTGTAGATATTACCAT+AGG - chr7_3:56834705-56834724 Msa1111150:CDS 35.0%
AACCCTAAATGACCCTTAAA+AGG - chr7_3:56834872-56834891 Msa1111150:intron 35.0%
ACCCTAAATGACCCTTAAAA+GGG - chr7_3:56834873-56834892 Msa1111150:intron 35.0%
!! TCCCTTTTAAGGGTCATTTA+GGG + chr7_3:56834877-56834896 None:intergenic 35.0%
!! TTCCCTTTTAAGGGTCATTT+AGG + chr7_3:56834878-56834897 None:intergenic 35.0%
!! GCATTTTGGTCACACTAAAA+AGG + chr7_3:56834990-56835009 None:intergenic 35.0%
! ACTATTAGCCGGAATTTTGA+GGG + chr7_3:56835495-56835514 None:intergenic 35.0%
! TACTATTAGCCGGAATTTTG+AGG + chr7_3:56835496-56835515 None:intergenic 35.0%
AGCATGTGATGAATTACAAC+AGG + chr7_3:56835588-56835607 None:intergenic 35.0%
TGTTGTAATTCATCACATGC+TGG - chr7_3:56835587-56835606 Msa1111150:CDS 35.0%
TTGTAATTAAACCGGTGGAA+AGG + chr7_3:56835620-56835639 None:intergenic 35.0%
AGGAGATCCTAGAATTAAGA+TGG - chr7_3:56835672-56835691 Msa1111150:CDS 35.0%
TTGAACTCCTCTTCATTTAG+CGG + chr7_3:56835773-56835792 None:intergenic 35.0%
TTAATCCATTTCCTAGGTGA+AGG + chr7_3:56836013-56836032 None:intergenic 35.0%
!! ACCTAGGAAATGGATTAAGA+AGG - chr7_3:56836015-56836034 Msa1111150:intron 35.0%
TCCTTCTTAATCCATTTCCT+AGG + chr7_3:56836019-56836038 None:intergenic 35.0%
! GCTATATCAGTCTTTTCCAT+TGG + chr7_3:56836055-56836074 None:intergenic 35.0%
AGACTGATATAGCATCATTG+TGG - chr7_3:56836062-56836081 Msa1111150:intron 35.0%
GACTGATATAGCATCATTGT+GGG - chr7_3:56836063-56836082 Msa1111150:intron 35.0%
!! GTTTGATGGAATGGATTTTG+TGG - chr7_3:56836093-56836112 Msa1111150:intron 35.0%
TTTACTTGGGAAGGTGATTA+TGG - chr7_3:56836213-56836232 Msa1111150:intron 35.0%
GAAGGTAAATAAGAGATTGG+AGG - chr7_3:56836351-56836370 Msa1111150:intron 35.0%
! TGAAAATAACAAGGCGTTTG+AGG - chr7_3:56836411-56836430 Msa1111150:intron 35.0%
! AAAAGTGTAGATACGCTCAA+GGG - chr7_3:56836454-56836473 Msa1111150:intron 35.0%
! GAAAAGCATAGATATGCTCA+AGG - chr7_3:56836516-56836535 Msa1111150:intron 35.0%
AATTTCCATATCCTTCGTTG+TGG + chr7_3:56836548-56836567 None:intergenic 35.0%
AACGAAGGATATGGAAATTG+AGG - chr7_3:56836549-56836568 Msa1111150:intron 35.0%
AATTTCCATATCCTTCACTG+CGG + chr7_3:56836611-56836630 None:intergenic 35.0%
AGTGAAGGATATGGAAATTG+AGG - chr7_3:56836612-56836631 Msa1111150:CDS 35.0%
! GAAAAGTATAGATACGCTCA+AGG - chr7_3:56836642-56836661 Msa1111150:CDS 35.0%
AAAGTATAGATACGCTCAAG+GGG - chr7_3:56836644-56836663 Msa1111150:CDS 35.0%
AATTTCCATATCCTTCACTG+CGG + chr7_3:56836611-56836630 None:intergenic 35.0%
AGTGAAGGATATGGAAATTG+AGG - chr7_3:56836612-56836631 Msa1111150:CDS 35.0%
! GAAAAGTATAGATACGCTCA+AGG - chr7_3:56836642-56836661 Msa1111150:CDS 35.0%
AAAGTATAGATACGCTCAAG+GGG - chr7_3:56836644-56836663 Msa1111150:CDS 35.0%
! TAGGATGTGAACTTGTTCTA+TGG + chr7_3:56836812-56836831 None:intergenic 35.0%
ACAAATCAAACGACGGAAAT+AGG + chr7_3:56836831-56836850 None:intergenic 35.0%
!! ATTTCCGTCGTTTGATTTGT+CGG - chr7_3:56836831-56836850 Msa1111150:exon 35.0%
! CCATTGTTAGTTGTAATGGG+AGG + chr7_3:56831349-56831368 None:intergenic 40.0%
CCTCCCATTACAACTAACAA+TGG - chr7_3:56831346-56831365 Msa1111150:CDS 40.0%
TGACAAGAGTCGAAGAAGTT+TGG + chr7_3:56831422-56831441 None:intergenic 40.0%
! ATTCAAAACGCCGTTGTTTC+GGG - chr7_3:56831500-56831519 Msa1111150:CDS 40.0%
TAAGCTAGAACCCGAAACAA+CGG + chr7_3:56831513-56831532 None:intergenic 40.0%
CGAGAAAAATTCAGTACGCA+TGG - chr7_3:56831778-56831797 Msa1111150:CDS 40.0%
AACAACTCATCATTGGATGC+AGG + chr7_3:56831868-56831887 None:intergenic 40.0%
CAATAAAATCTCAACCTGGC+CGG + chr7_3:56832129-56832148 None:intergenic 40.0%
!! TTAGCTTTTTCCTCCAAACG+TGG + chr7_3:56832371-56832390 None:intergenic 40.0%
! GGCAAAACCTGTTCTAAATG+AGG - chr7_3:56832427-56832446 Msa1111150:CDS 40.0%
TAGGTGAAACTGACAATTGC+TGG - chr7_3:56832517-56832536 Msa1111150:intron 40.0%
AGGTGAAACTGACAATTGCT+GGG - chr7_3:56832518-56832537 Msa1111150:intron 40.0%
TGCTGGGAAAAATACTGTGA+AGG - chr7_3:56832534-56832553 Msa1111150:intron 40.0%
! TGTGAAGGAAGAGGATTTTG+AGG - chr7_3:56832549-56832568 Msa1111150:intron 40.0%
TATTCGTCTGTCTTCAGACA+GGG - chr7_3:56832686-56832705 Msa1111150:CDS 40.0%
TGTTGTGCAATGATGTTCAG+AGG - chr7_3:56832758-56832777 Msa1111150:CDS 40.0%
! TTTGCTGGTTGTGTCTTTGA+TGG - chr7_3:56832853-56832872 Msa1111150:intron 40.0%
TCTTATGCAGATATGCTGTG+AGG - chr7_3:56833432-56833451 Msa1111150:CDS 40.0%
CTTATGCAGATATGCTGTGA+GGG - chr7_3:56833433-56833452 Msa1111150:CDS 40.0%
!!! TGACTGTTTTTTTCCAGCCT+TGG + chr7_3:56833459-56833478 None:intergenic 40.0%
ATATTGCTATGATTGTCCGC+AGG - chr7_3:56833982-56834001 Msa1111150:CDS 40.0%
ATAGGATACTAGGGTCAACT+GGG + chr7_3:56834039-56834058 None:intergenic 40.0%
GTCTGCTTCATAGGATACTA+GGG + chr7_3:56834048-56834067 None:intergenic 40.0%
! GTAAAGGAGTTGAGTCTTGT+TGG + chr7_3:56834079-56834098 None:intergenic 40.0%
CTCAACTCCTTTACATCAAG+CGG - chr7_3:56834085-56834104 Msa1111150:CDS 40.0%
! ACAATCTGGTGATGCTGTAA+AGG - chr7_3:56834109-56834128 Msa1111150:CDS 40.0%
! TGGTGATGCTGTAAAGGTTA+TGG - chr7_3:56834115-56834134 Msa1111150:CDS 40.0%
!!! GGTTATGGAACTTTTGGAAC+AGG - chr7_3:56834130-56834149 Msa1111150:CDS 40.0%
ATCCGTGCACTAAAGATGAA+AGG - chr7_3:56834159-56834178 Msa1111150:CDS 40.0%
TCCGTGCACTAAAGATGAAA+GGG - chr7_3:56834160-56834179 Msa1111150:CDS 40.0%
CTGTCCATTGACCAAAGAAA+TGG - chr7_3:56834289-56834308 Msa1111150:CDS 40.0%
AGAATCACAAGCTGCTATGA+AGG - chr7_3:56834313-56834332 Msa1111150:CDS 40.0%
!!! TTTTGCTCTAGCTCTTCTCT+TGG + chr7_3:56834586-56834605 None:intergenic 40.0%
ACGTGAAGCAGAAGAAAAGA+AGG - chr7_3:56834620-56834639 Msa1111150:intron 40.0%
AGACCTAGAAAACAAACGTG+AGG + chr7_3:56834690-56834709 None:intergenic 40.0%
! TCTTTAGAAATCGTGGCCAA+TGG - chr7_3:56834823-56834842 Msa1111150:intron 40.0%
AAAGGGAAGTTACTAAGTCG+CGG - chr7_3:56834890-56834909 Msa1111150:intron 40.0%
CACATGATGCAGAAAGAGAA+AGG - chr7_3:56835438-56835457 Msa1111150:CDS 40.0%
AATGGATGCCCTCAAAATTC+CGG - chr7_3:56835484-56835503 Msa1111150:CDS 40.0%
GAAGTGGTTGTACTATTAGC+CGG + chr7_3:56835506-56835525 None:intergenic 40.0%
TGAAAGGCTATTAGCTGAAG+TGG + chr7_3:56835522-56835541 None:intergenic 40.0%
TTCAGCTAATAGCCTTTCAG+AGG - chr7_3:56835523-56835542 Msa1111150:CDS 40.0%
GCCAATGAATGTGGTTTAGT+CGG - chr7_3:56835545-56835564 Msa1111150:CDS 40.0%
CCAATGAATGTGGTTTAGTC+GGG - chr7_3:56835546-56835565 Msa1111150:CDS 40.0%
CAATGAATGTGGTTTAGTCG+GGG - chr7_3:56835547-56835566 Msa1111150:CDS 40.0%
TTCATGCATGCATGTTCACA+AGG - chr7_3:56835652-56835671 Msa1111150:CDS 40.0%
AATGTCTCCGCTAAATGAAG+AGG - chr7_3:56835763-56835782 Msa1111150:intron 40.0%
AGAGGAGTTCAAGACCTATT+TGG - chr7_3:56835781-56835800 Msa1111150:intron 40.0%
GAAGCAAAATTGGACGTTAG+TGG - chr7_3:56835851-56835870 Msa1111150:intron 40.0%
TTCAAAGGTTGTGCAGCAAT+AGG + chr7_3:56835953-56835972 None:intergenic 40.0%
TTCTTCCTTCACCTAGGAAA+TGG - chr7_3:56836005-56836024 Msa1111150:intron 40.0%
GATATAGCATCATTGTGGGA+CGG - chr7_3:56836067-56836086 Msa1111150:intron 40.0%
ATATAGCATCATTGTGGGAC+GGG - chr7_3:56836068-56836087 Msa1111150:intron 40.0%
CTTCACAAAAGATGTGCAAG+AGG - chr7_3:56836129-56836148 Msa1111150:intron 40.0%
AAAAGATGTGCAAGAGGTGA+AGG - chr7_3:56836135-56836154 Msa1111150:intron 40.0%
AAAAGCTAGTGAGATGCTTG+TGG - chr7_3:56836171-56836190 Msa1111150:intron 40.0%
GACCAATTTCAACCTGTACT+GGG - chr7_3:56836235-56836254 Msa1111150:intron 40.0%
! AAATAACAAGGCGTTTGAGG+AGG - chr7_3:56836414-56836433 Msa1111150:intron 40.0%
! GAAAAGTGTAGATACGCTCA+AGG - chr7_3:56836453-56836472 Msa1111150:intron 40.0%
AAAGTGTAGATACGCTCAAG+GGG - chr7_3:56836455-56836474 Msa1111150:intron 40.0%
TGCGAAGGATATGGAAATTG+AGG - chr7_3:56836486-56836505 Msa1111150:intron 40.0%
!! GACGCTGCATTTTGTTATCA+AGG - chr7_3:56836772-56836791 Msa1111150:CDS 40.0%
!! GCTGCATTTTGTTATCAAGG+TGG - chr7_3:56836775-56836794 Msa1111150:CDS 40.0%
! TTAGTTGTAATGGGAGGGGA+GGG + chr7_3:56831343-56831362 None:intergenic 45.0%
CAAGAGTCGAAGAAGTTTGG+TGG + chr7_3:56831419-56831438 None:intergenic 45.0%
ACCAATCACCCCATGATTTC+CGG - chr7_3:56832107-56832126 Msa1111150:CDS 45.0%
!! CGGCCAGGTTGAGATTTTAT+TGG - chr7_3:56832127-56832146 Msa1111150:CDS 45.0%
!! AGGAAGAGGATTTTGAGGAC+CGG - chr7_3:56832554-56832573 Msa1111150:intron 45.0%
CTATTCGTCTGTCTTCAGAC+AGG - chr7_3:56832685-56832704 Msa1111150:CDS 45.0%
AATCCGTGATTGTTGAGCCA+AGG - chr7_3:56832785-56832804 Msa1111150:intron 45.0%
ATCCGTGATTGTTGAGCCAA+GGG - chr7_3:56832786-56832805 Msa1111150:intron 45.0%
ATCCCTTGGCTCAACAATCA+CGG + chr7_3:56832791-56832810 None:intergenic 45.0%
AAGCAGAACAATCCTCAGTC+GGG + chr7_3:56832818-56832837 None:intergenic 45.0%
CAAGCAGAACAATCCTCAGT+CGG + chr7_3:56832819-56832838 None:intergenic 45.0%
AGGATTGTTCTGCTTGCATC+CGG - chr7_3:56832823-56832842 Msa1111150:intron 45.0%
TGATATAGGTCATACCGCCT+TGG + chr7_3:56833289-56833308 None:intergenic 45.0%
!! AGTTCTGCCAGAAGCATCTA+TGG + chr7_3:56833483-56833502 None:intergenic 45.0%
GGCAGAACTATACATTCTGC+TGG - chr7_3:56833494-56833513 Msa1111150:intron 45.0%
TTCGTGAACTGCTTACTGCT+TGG - chr7_3:56833847-56833866 Msa1111150:intron 45.0%
! AGTCGTCAGCTGCTTTATGA+TGG - chr7_3:56833921-56833940 Msa1111150:CDS 45.0%
CATAGGATACTAGGGTCAAC+TGG + chr7_3:56834040-56834059 None:intergenic 45.0%
CGTCTGCTTCATAGGATACT+AGG + chr7_3:56834049-56834068 None:intergenic 45.0%
!! GATTGTGCCGCTTGATGTAA+AGG + chr7_3:56834095-56834114 None:intergenic 45.0%
TTACATCAAGCGGCACAATC+TGG - chr7_3:56834095-56834114 Msa1111150:CDS 45.0%
CCCCTTTCATCTTTAGTGCA+CGG + chr7_3:56834164-56834183 None:intergenic 45.0%
CCGTGCACTAAAGATGAAAG+GGG - chr7_3:56834161-56834180 Msa1111150:CDS 45.0%
TTGGCAGTAAAAGGGAGACT+AGG - chr7_3:56834452-56834471 Msa1111150:intron 45.0%
TGGCAGTAAAAGGGAGACTA+GGG - chr7_3:56834453-56834472 Msa1111150:intron 45.0%
! GCCTTCTTTTGTGCATGTAC+AGG - chr7_3:56834547-56834566 Msa1111150:intron 45.0%
GCCTGTACATGCACAAAAGA+AGG + chr7_3:56834551-56834570 None:intergenic 45.0%
AGCAGAAGAAAAGAAGGCTC+AGG - chr7_3:56834626-56834645 Msa1111150:intron 45.0%
!! GGACCTCACGTTTGTTTTCT+AGG - chr7_3:56834684-56834703 Msa1111150:CDS 45.0%
! GTGGTCCTTTTGACAACCTA+TGG + chr7_3:56834724-56834743 None:intergenic 45.0%
!! GATCGATGCTGTAGCTTTAG+TGG - chr7_3:56834789-56834808 Msa1111150:intron 45.0%
! AACCGCGTCTTTAGAAATCG+TGG - chr7_3:56834816-56834835 Msa1111150:intron 45.0%
! TGGGCATTTTACTTCCTAGC+TGG - chr7_3:56834924-56834943 Msa1111150:intron 45.0%
! GGGCATTTTACTTCCTAGCT+GGG - chr7_3:56834925-56834944 Msa1111150:intron 45.0%
TGAAGAGAAACCAGAGAGAC+AGG + chr7_3:56834966-56834985 None:intergenic 45.0%
AGCTGCCACAGAAAGAAGAA+TGG - chr7_3:56835466-56835485 Msa1111150:CDS 45.0%
GGCATCCATTCTTCTTTCTG+TGG + chr7_3:56835474-56835493 None:intergenic 45.0%
! CACATTCATTGGCCTCTGAA+AGG + chr7_3:56835538-56835557 None:intergenic 45.0%
CTTTCAGAGGCCAATGAATG+TGG - chr7_3:56835536-56835555 Msa1111150:CDS 45.0%
CCCGACTAAACCACATTCAT+TGG + chr7_3:56835549-56835568 None:intergenic 45.0%
CTGGTAAAGTTCCTTTCCAC+CGG - chr7_3:56835606-56835625 Msa1111150:CDS 45.0%
GTTCAAGACCTATTTGGCGA+AGG - chr7_3:56835787-56835806 Msa1111150:intron 45.0%
! TTCTCTAGCCTTCGCCAAAT+AGG + chr7_3:56835798-56835817 None:intergenic 45.0%
!! TGGTGCTGCTGAAGCAAAAT+TGG - chr7_3:56835841-56835860 Msa1111150:intron 45.0%
ATCCGCAAGCTCAAGAGAAA+AGG - chr7_3:56835881-56835900 Msa1111150:intron 45.0%
! CACCTTTTCTCTTGAGCTTG+CGG + chr7_3:56835886-56835905 None:intergenic 45.0%
GCAAGCTCAAGAGAAAAGGT+GGG - chr7_3:56835885-56835904 Msa1111150:intron 45.0%
CAAGCTCAAGAGAAAAGGTG+GGG - chr7_3:56835886-56835905 Msa1111150:intron 45.0%
AAGCTCAAGAGAAAAGGTGG+GGG - chr7_3:56835887-56835906 Msa1111150:intron 45.0%
AAAAGGTGGGGGAAACTCAA+AGG - chr7_3:56835898-56835917 Msa1111150:intron 45.0%
GGTTCTGTGTCTGAAAGTGA+CGG + chr7_3:56835932-56835951 None:intergenic 45.0%
GCAGCCGCTATGTTATTCAA+AGG + chr7_3:56835968-56835987 None:intergenic 45.0%
AATAACATAGCGGCTGCATG+CGG - chr7_3:56835971-56835990 Msa1111150:intron 45.0%
AACCTTCGCTCTGCTTTACT+TGG - chr7_3:56836199-56836218 Msa1111150:intron 45.0%
ACCTTCGCTCTGCTTTACTT+GGG - chr7_3:56836200-56836219 Msa1111150:intron 45.0%
GGACCAATTTCAACCTGTAC+TGG - chr7_3:56836234-56836253 Msa1111150:intron 45.0%
! GTCCCAGTACAGGTTGAAAT+TGG + chr7_3:56836240-56836259 None:intergenic 45.0%
TTGCTTTCATGTCCCAGTAC+AGG + chr7_3:56836250-56836269 None:intergenic 45.0%
TGGTTGCATTCAGTTCGTCT+CGG + chr7_3:56836276-56836295 None:intergenic 45.0%
GCAATCCACAACGAAGGATA+TGG - chr7_3:56836540-56836559 Msa1111150:intron 45.0%
GCAATCCGCAGAAAAGGATA+TGG - chr7_3:56836729-56836748 Msa1111150:CDS 45.0%
! TAGTTGTAATGGGAGGGGAG+GGG + chr7_3:56831342-56831361 None:intergenic 50.0%
! GTTAGTTGTAATGGGAGGGG+AGG + chr7_3:56831344-56831363 None:intergenic 50.0%
GTGTTTCGAAGCGAGGAGAA+GGG + chr7_3:56831451-56831470 None:intergenic 50.0%
AGTGTTTCGAAGCGAGGAGA+AGG + chr7_3:56831452-56831471 None:intergenic 50.0%
! GGTTGAAGTGTTTCGAAGCG+AGG + chr7_3:56831458-56831477 None:intergenic 50.0%
TGATCAACGTGGTTTGAGGG+TGG + chr7_3:56831479-56831498 None:intergenic 50.0%
TCAACCTGGCCGGAAATCAT+GGG + chr7_3:56832119-56832138 None:intergenic 50.0%
! TGGCCGTCCTCATTTAGAAC+AGG + chr7_3:56832437-56832456 None:intergenic 50.0%
CAGGGCAAAGAGTTTCTGTC+TGG - chr7_3:56832704-56832723 Msa1111150:CDS 50.0%
! TCTTTTTCTTTCCTGCCCCC+AGG - chr7_3:56833254-56833273 Msa1111150:intron 50.0%
CCTTGGAACACAAAACCTGG+GGG + chr7_3:56833272-56833291 None:intergenic 50.0%
GCCTTGGAACACAAAACCTG+GGG + chr7_3:56833273-56833292 None:intergenic 50.0%
CGCCTTGGAACACAAAACCT+GGG + chr7_3:56833274-56833293 None:intergenic 50.0%
!! CCAGGTTTTGTGTTCCAAGG+CGG - chr7_3:56833272-56833291 Msa1111150:intron 50.0%
CAGTCAGCCATAGATGCTTC+TGG - chr7_3:56833473-56833492 Msa1111150:intron 50.0%
! CGTTTTGCTTCCCTGAGAGT+AGG + chr7_3:56834008-56834027 None:intergenic 50.0%
GTTGCTCTCGTCTGCTTCAT+AGG + chr7_3:56834057-56834076 None:intergenic 50.0%
!!! GGAACTTTTGGAACAGGGCT+TGG - chr7_3:56834136-56834155 Msa1111150:CDS 50.0%
TGCCAGCTGCCAACATGTAT+GGG + chr7_3:56834193-56834212 None:intergenic 50.0%
TTGCCAGCTGCCAACATGTA+TGG + chr7_3:56834194-56834213 None:intergenic 50.0%
AACTGGCTGATAGTAGCCAC+AGG + chr7_3:56834758-56834777 None:intergenic 50.0%
TGGCTACTATCAGCCAGTTG+TGG - chr7_3:56834759-56834778 Msa1111150:intron 50.0%
TCGATCTGTGATGCCACAAC+TGG + chr7_3:56834775-56834794 None:intergenic 50.0%
! GGCCACGATTTCTAAAGACG+CGG + chr7_3:56834821-56834840 None:intergenic 50.0%
GGAAGTTACTAAGTCGCGGA+GGG - chr7_3:56834894-56834913 Msa1111150:intron 50.0%
GAAGTTACTAAGTCGCGGAG+GGG - chr7_3:56834895-56834914 Msa1111150:intron 50.0%
AAGTTACTAAGTCGCGGAGG+GGG - chr7_3:56834896-56834915 Msa1111150:intron 50.0%
CGCAAGCTCAAGAGAAAAGG+TGG - chr7_3:56835884-56835903 Msa1111150:intron 50.0%
AGGTGGTTCTTCCTTCACCT+AGG - chr7_3:56835999-56836018 Msa1111150:intron 50.0%
! GGAGAAGTCTTGTGTCCCAA+TGG - chr7_3:56836036-56836055 Msa1111150:intron 50.0%
TGCAAGAGGTGAAGGAGTCT+GGG - chr7_3:56836143-56836162 Msa1111150:intron 50.0%
TCCCAAGTAAAGCAGAGCGA+AGG + chr7_3:56836204-56836223 None:intergenic 50.0%
TCGCTCTGCTTTACTTGGGA+AGG - chr7_3:56836204-56836223 Msa1111150:intron 50.0%
ACACACTGCTCTGACTCAGT+TGG - chr7_3:56836378-56836397 Msa1111150:intron 50.0%
! TAACAAGGCGTTTGAGGAGG+AGG - chr7_3:56836417-56836436 Msa1111150:intron 50.0%
AGATACGCTCAAGGGGCAAT+CGG - chr7_3:56836462-56836481 Msa1111150:intron 50.0%
CAAGGTGCAATCCACAACGA+AGG - chr7_3:56836534-56836553 Msa1111150:intron 50.0%
GCAATCCGCAGTGAAGGATA+TGG - chr7_3:56836603-56836622 Msa1111150:CDS 50.0%
GCAATCCGCAGTGAAGGATA+TGG - chr7_3:56836603-56836622 Msa1111150:CDS 50.0%
!! TCCGTCGTTTGATTTGTCGG+AGG - chr7_3:56836834-56836853 Msa1111150:exon 50.0%
GCCTCCGACAAATCAAACGA+CGG + chr7_3:56836838-56836857 None:intergenic 50.0%
GCTATGAAGTCCGTGGTTGA+TGG - chr7_3:56836862-56836881 Msa1111150:five_prime_UTR 50.0%
! AGTTGTAATGGGAGGGGAGG+GGG + chr7_3:56831341-56831360 None:intergenic 55.0%
GCCGGAAATCATGGGGTGAT+TGG + chr7_3:56832111-56832130 None:intergenic 55.0%
CAACCTGGCCGGAAATCATG+GGG + chr7_3:56832118-56832137 None:intergenic 55.0%
CTCAACCTGGCCGGAAATCA+TGG + chr7_3:56832120-56832139 None:intergenic 55.0%
! CTCAGTCGGGTGTTATCCCT+TGG + chr7_3:56832805-56832824 None:intergenic 55.0%
CAAGGGATAACACCCGACTG+AGG - chr7_3:56832803-56832822 Msa1111150:intron 55.0%
TTGTTCTGCTTGCATCCGGC+AGG - chr7_3:56832827-56832846 Msa1111150:intron 55.0%
! ACAACCAGCAAAGTGCCTGC+CGG + chr7_3:56832845-56832864 None:intergenic 55.0%
!! CCCCCAGGTTTTGTGTTCCA+AGG - chr7_3:56833269-56833288 Msa1111150:intron 55.0%
CCGCCTTGGAACACAAAACC+TGG + chr7_3:56833275-56833294 None:intergenic 55.0%
CAGATATGCTGTGAGGGCCA+AGG - chr7_3:56833439-56833458 Msa1111150:CDS 55.0%
AGCAGCTGACGACTGCTTGA+AGG + chr7_3:56833915-56833934 None:intergenic 55.0%
GGGACGAACCCCATACATGT+TGG - chr7_3:56834181-56834200 Msa1111150:CDS 55.0%
ACCCCATACATGTTGGCAGC+TGG - chr7_3:56834188-56834207 Msa1111150:CDS 55.0%
GCCAGCTGCCAACATGTATG+GGG + chr7_3:56834192-56834211 None:intergenic 55.0%
ACCACTTTCACAGCAGCCTG+TGG - chr7_3:56834739-56834758 Msa1111150:CDS 55.0%
GGGAAGTTACTAAGTCGCGG+AGG - chr7_3:56834893-56834912 Msa1111150:intron 55.0%
AGTTACTAAGTCGCGGAGGG+GGG - chr7_3:56834897-56834916 Msa1111150:intron 55.0%
CATCTGGCAACCTGTCTCTC+TGG - chr7_3:56834953-56834972 Msa1111150:intron 55.0%
AGGTGGGGGAAACTCAAAGG+AGG - chr7_3:56835901-56835920 Msa1111150:intron 55.0%
GGTGGGGGAAACTCAAAGGA+GGG - chr7_3:56835902-56835921 Msa1111150:intron 55.0%
GTGGGGGAAACTCAAAGGAG+GGG - chr7_3:56835903-56835922 Msa1111150:intron 55.0%
TAGCATCATTGTGGGACGGG+AGG - chr7_3:56836071-56836090 Msa1111150:intron 55.0%
TTGTGGGACGGGAGGTTTGA+TGG - chr7_3:56836079-56836098 Msa1111150:intron 55.0%
GGACGGGAGGTTTGATGGAA+TGG - chr7_3:56836084-56836103 Msa1111150:intron 55.0%
GTGCAAGAGGTGAAGGAGTC+TGG - chr7_3:56836142-56836161 Msa1111150:intron 55.0%
AGAGGTGAAGGAGTCTGGGT+TGG - chr7_3:56836147-56836166 Msa1111150:intron 55.0%
GCGTTTGAGGAGGAGGTTGT+TGG - chr7_3:56836424-56836443 Msa1111150:intron 55.0%
GCAATCGGCTGCGAAGGATA+TGG - chr7_3:56836477-56836496 Msa1111150:intron 55.0%
CAAGGGGCAATCCGCAGAAA+AGG - chr7_3:56836723-56836742 Msa1111150:CDS 55.0%
AATGGGAGGGGAGGGGGATT+AGG + chr7_3:56831335-56831354 None:intergenic 60.0%
TCACCCCATGATTTCCGGCC+AGG - chr7_3:56832112-56832131 Msa1111150:CDS 60.0%
GGAACACAAAACCTGGGGGC+AGG + chr7_3:56833268-56833287 None:intergenic 60.0%
TATGCTGTGAGGGCCAAGGC+TGG - chr7_3:56833443-56833462 Msa1111150:CDS 60.0%
TTGTCCGCAGGCCTACTCTC+AGG - chr7_3:56833994-56834013 Msa1111150:CDS 60.0%
TGTCCGCAGGCCTACTCTCA+GGG - chr7_3:56833995-56834014 Msa1111150:CDS 60.0%
CTTCCCTGAGAGTAGGCCTG+CGG + chr7_3:56834001-56834020 None:intergenic 60.0%
GCCACAGGCTGCTGTGAAAG+TGG + chr7_3:56834743-56834762 None:intergenic 60.0%
TGGCCAATGGCAGCGCTACA+GGG - chr7_3:56834836-56834855 Msa1111150:intron 60.0%
TAGCCCTGTAGCGCTGCCAT+TGG + chr7_3:56834842-56834861 None:intergenic 60.0%
! AAGTCGCGGAGGGGGGATTT+TGG - chr7_3:56834904-56834923 Msa1111150:intron 60.0%
! AGTCGCGGAGGGGGGATTTT+GGG - chr7_3:56834905-56834924 Msa1111150:intron 60.0%
TCCTAGCTGGGCTGAGCATC+TGG - chr7_3:56834937-56834956 Msa1111150:intron 60.0%
AGCGGCTGCATGCGGTTCTA+AGG - chr7_3:56835979-56835998 Msa1111150:intron 60.0%
!! GGCTGCATGCGGTTCTAAGG+TGG - chr7_3:56835982-56836001 Msa1111150:intron 60.0%
CAAGGGGCAATCCGCAGTGA+AGG - chr7_3:56836597-56836616 Msa1111150:intron 60.0%
CAAGGGGCAATCCGCAGTGA+AGG - chr7_3:56836597-56836616 Msa1111150:intron 60.0%
GGCTGACGCTATGAAGTCCG+TGG - chr7_3:56836855-56836874 Msa1111150:five_prime_UTR 60.0%
GCATCCGGCAGGCACTTTGC+TGG - chr7_3:56832838-56832857 Msa1111150:intron 65.0%
GTGGCCAATGGCAGCGCTAC+AGG - chr7_3:56834835-56834854 Msa1111150:intron 65.0%
GCCAGATGCTCAGCCCAGCT+AGG + chr7_3:56834941-56834960 None:intergenic 65.0%
CAAGGGGCAATCGGCTGCGA+AGG - chr7_3:56836471-56836490 Msa1111150:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 56831314 56836897 56831314 ID=Msa1111150;Name=Msa1111150
chr7_3 mRNA 56831314 56836897 56831314 ID=Msa1111150-mRNA-1;Parent=Msa1111150;Name=Msa1111150-mRNA-1;_AED=0.20;_eAED=0.22;_QI=51|0.42|0.37|1|1|1|8|0|926
chr7_3 exon 56831314 56832452 56831314 ID=Msa1111150-mRNA-1:exon:12053;Parent=Msa1111150-mRNA-1
chr7_3 exon 56832603 56832789 56832603 ID=Msa1111150-mRNA-1:exon:12052;Parent=Msa1111150-mRNA-1
chr7_3 exon 56833350 56833484 56833350 ID=Msa1111150-mRNA-1:exon:12051;Parent=Msa1111150-mRNA-1
chr7_3 exon 56833564 56833638 56833564 ID=Msa1111150-mRNA-1:exon:12050;Parent=Msa1111150-mRNA-1
chr7_3 exon 56833877 56834368 56833877 ID=Msa1111150-mRNA-1:exon:12049;Parent=Msa1111150-mRNA-1
chr7_3 exon 56834655 56834769 56834655 ID=Msa1111150-mRNA-1:exon:12048;Parent=Msa1111150-mRNA-1
chr7_3 exon 56835303 56835691 56835303 ID=Msa1111150-mRNA-1:exon:12047;Parent=Msa1111150-mRNA-1
chr7_3 exon 56836598 56836897 56836598 ID=Msa1111150-mRNA-1:exon:12046;Parent=Msa1111150-mRNA-1
chr7_3 five_prime_UTR 56836847 56836897 56836847 ID=Msa1111150-mRNA-1:five_prime_utr;Parent=Msa1111150-mRNA-1
chr7_3 CDS 56836598 56836846 56836598 ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1
chr7_3 CDS 56835303 56835691 56835303 ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1
chr7_3 CDS 56834655 56834769 56834655 ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1
chr7_3 CDS 56833877 56834368 56833877 ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1
chr7_3 CDS 56833564 56833638 56833564 ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1
chr7_3 CDS 56833350 56833484 56833350 ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1
chr7_3 CDS 56832603 56832789 56832603 ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1
chr7_3 CDS 56831314 56832452 56831314 ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1
Gene Sequence

>Msa1111150

ATGGCATTGTCATCATCTCAAGAAAAACTTCAACGTTCAATCTTTCAACTTCCACCAAACTTCTTCGACTCTTGTCATCTTCTCCCTTCTCCTCGCTTCGAAACACTTCAACCACCCTCAAACCACGTTGATCATATTCAAAACGCCGTTGTTTCGGGTTCTAGCTTAACGTGCAATACATGTAAGGCTCAGTTTGATTCTTTTCAAGATCAACGTTCTCACCTCAAATCTGATATTCATCGATTCAATGTGAAACTGACAATTGCTGGGAAAAATACTGTGAAGGAAGAGGATTTTGAGGACCGGACATCTGATTTTGTCAAAGACTGTGATGTGTCATGTATATCGGGATCAGAAAGTGACGATAACAGTGAAAATGAGTCTGGTAAATCCGGTGAAAGCTTTAAACAAAAGCTATTCGTCTGTCTTCAGACAGGGCAAAGAGTTTCTGTCTGGAAGTGTTTGATTATGAATGTGAGCGAAAATGTGTTGTGCAATGATGTTCAGAGGTTGAAATCCGTGATTGTTGAGCCAAGGGATAACACCCGACTGAGGATTGTTCTGCTTGCATCCGGCAGGCACTTTGCTGGTTGTGTCTTTGATGGCGATACACTCGTAGCTCACAAGACATTTCATAGATATGCTGTGAGGGCCAAGGCTGGAAAAAAACAGTCAGCCATAGATGCTTCTGGCAGAACTATACATTCTGCTGGTGCTTCACTTCATCGTTACAACGAACCTGCATTTAAAAAGGAAGTTCGTGAACTGCTTACTGCTTGGAGACCTTATTTTGATGCTTCTATTTGCATTTTTATACACGCACCTTCAAGCAGTCGTCAGCTGCTTTATGATGGAGAAAAACCATGTTTTACCAATCCACAATGCGTTAGAAATATTGCTATGATTGTCCGCAGGCCTACTCTCAGGGAAGCAAAACGTGTATATACCCAGTTGACCCTAGTATCCTATGAAGCAGACGAGAGCAACCAACAAGACTCAACTCCTTTACATCAAGCGGCACAATCTGGTGATGCTGTAAAGGTTATGGAACTTTTGGAACAGGGCTTGGATCCGTGCACTAAAGATGAAAGGGGACGAACCCCATACATGTTGGCAGCTGGCAAGCAAATCAAGAAAACTTTCAGAAGGTTTATGGCTTCAAATCTTGACAAATGGGATTGGAAAGCTGCAAAAGTGTTCTGTCCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTATGAAGAAAAAAAAAGCCAAGAGAAGAGCTAGAGCAAAAGAATTAGAGGAAATACGTGAAGCAGAAGAAAAGAAGGCTCAGGTTGTCAAAAGGACCACTTTCACAGCAGCCTGTGGCTACTATCAGCCAGTTGTGGCATCACAGATCGATGCTGTAGCTTTAGTGGCTGCAACCGCGTCTTTAGAAATCGTGGCCAATGGCAGCGCTACAGGGCTAGAGGAAATAAAGAGAGCACATGATGCAGAAAGAGAAAGGAGAGCAGCTGCCACAGAAAGAAGAATGGATGCCCTCAAAATTCCGGCTAATAGTACAACCACTTCAGCTAATAGCCTTTCAGAGGCCAATGAATGTGGTTTAGTCGGGGATACAACATCCTTTTCCTGTTGTAATTCATCACATGCTGGAAGAATGTCTCCGCTAAATGAAGAGGAGTTCAAGACCTATTTGGCGAAGGCTAGAGAAAAGAGAGACATAGTTTTGCAATTTGGTGCTGCTGAAGCAAAATTGGACGTTAGTGGTGTTACAATCCGCAAGCTCAAGAGAAAAGGTGGGGGAAACTCAAAGGAGGGGTCACCGTCACTTTCAGACACAGAACCTATTGCTGCACAACCTTTGAATAACATAGCGGCTGCATGCGGTTCTAAGGTGGTTCTTCCTTCACCTAGGAAATGGATTAAGAAGGAGAAGTCTTGTGTCCCAATGGAAAAGACTGATATAGCATCATTGTGGGACGGGAGGTTTGATGGAATGGATTTTGTGGACAGAAATCTATGCTTCACAAAAGATGTGCAAGAGGTGAAGGAGTCTGGGTTGGAAAAAGCTAGTGAGATGCTTGTGGCGTACAACCTTCGCTCTGCTTTACTTGGGAAGGTGATTATGGACCAATTTCAACCTGTACTGGGACATGAAAGCAACTGCCGAGACGAACTGAATGCAACCAAAGAAAAATTGAAAATAGCCAATGATATTCTTGGAGATATGAAGAAACAAATATTGAAGGTAAATAAGAGATTGGAGGAAGAACACACTGCTCTGACTCAGTTGGAGAAAAAGACTGAAAATAACAAGGCGTTTGAGGAGGAGGTTGTTGGCTTGAAGAAAAGTGTAGATACGCTCAAGGGGCAATCGGCTGCGAAGGATATGGAAATTGAGGATTTGAAGAAAAGCATAGATATGCTCAAGGTGCAATCCACAACGAAGGATATGGAAATTGAGGATTTGAATAAAATTATGGATATGTTCAAGGGGCAATCCGCAGTGAAGGATATGGAAATTGAGGATTTGAAGAAAAGTATAGATACGCTCAAGGGGCAATCCGCAGTGAAGGATATGGAAATTGAGGATTTGAAGAAAAGTATAGATACGCTCAAGGGGCAATCCGCAGAAAAGGATATGGAAATTGAGGAGTTGAAGATAGACGCTGCATTTTGTTATCAAGGTGGTTTTTACAAGGCCATAGAACAAGTTCACATCCTATTTCCGTCGTTTGATTTGTCGGAGGCTGACGCTATGAAGTCCGTGGTTGATGGAAAACTAATATAA

Protein sequence

>Msa1111150

MALSSSQEKLQRSIFQLPPNFFDSCHLLPSPRFETLQPPSNHVDHIQNAVVSGSSLTCNTCKAQFDSFQDQRSHLKSDIHRFNVKLTIAGKNTVKEEDFEDRTSDFVKDCDVSCISGSESDDNSENESGKSGESFKQKLFVCLQTGQRVSVWKCLIMNVSENVLCNDVQRLKSVIVEPRDNTRLRIVLLASGRHFAGCVFDGDTLVAHKTFHRYAVRAKAGKKQSAIDASGRTIHSAGASLHRYNEPAFKKEVRELLTAWRPYFDASICIFIHAPSSSRQLLYDGEKPCFTNPQCVRNIAMIVRRPTLREAKRVYTQLTLVSYEADESNQQDSTPLHQAAQSGDAVKVMELLEQGLDPCTKDERGRTPYMLAAGKQIKKTFRRFMASNLDKWDWKAAKVFCPLTKEMEESQAAMKKKKAKRRARAKELEEIREAEEKKAQVVKRTTFTAACGYYQPVVASQIDAVALVAATASLEIVANGSATGLEEIKRAHDAERERRAAATERRMDALKIPANSTTTSANSLSEANECGLVGDTTSFSCCNSSHAGRMSPLNEEEFKTYLAKAREKRDIVLQFGAAEAKLDVSGVTIRKLKRKGGGNSKEGSPSLSDTEPIAAQPLNNIAAACGSKVVLPSPRKWIKKEKSCVPMEKTDIASLWDGRFDGMDFVDRNLCFTKDVQEVKESGLEKASEMLVAYNLRSALLGKVIMDQFQPVLGHESNCRDELNATKEKLKIANDILGDMKKQILKVNKRLEEEHTALTQLEKKTENNKAFEEEVVGLKKSVDTLKGQSAAKDMEIEDLKKSIDMLKVQSTTKDMEIEDLNKIMDMFKGQSAVKDMEIEDLKKSIDTLKGQSAVKDMEIEDLKKSIDTLKGQSAEKDMEIEELKIDAAFCYQGGFYKAIEQVHILFPSFDLSEADAMKSVVDGKLI*