Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1111150 | KEH23328.1 | 72.147 | 736 | 133 | 6 | 3 | 674 | 1 | 728 | 0.0 | 1028 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1111150 | sp|Q9H8Y5|ANKZ1_HUMAN | 35.410 | 305 | 159 | 9 | 46 | 326 | 62 | 352 | 2.16e-38 | 157 |
Msa1111150 | sp|Q9H8Y5|ANKZ1_HUMAN | 47.059 | 85 | 45 | 0 | 334 | 418 | 537 | 621 | 1.87e-13 | 78.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1111150 | A0A072U2A1 | 72.147 | 736 | 133 | 6 | 3 | 674 | 1 | 728 | 0.0 | 1028 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0016570 | Msa1111150 | 0.825943 | 3.558729e-54 | -8.615850e-47 |
Msa0016580 | Msa1111150 | 0.850554 | 1.575543e-60 | -8.615850e-47 |
Msa0064970 | Msa1111150 | 0.802537 | 5.353675e-49 | -8.615850e-47 |
Msa0110260 | Msa1111150 | 0.802462 | 5.547237e-49 | -8.615850e-47 |
Msa0110270 | Msa1111150 | 0.836486 | 9.099634e-57 | -8.615850e-47 |
Msa0111510 | Msa1111150 | 0.826584 | 2.503761e-54 | -8.615850e-47 |
Msa0672690 | Msa1111150 | 0.803304 | 3.715769e-49 | -8.615850e-47 |
Msa0694370 | Msa1111150 | 0.855769 | 5.050767e-62 | -8.615850e-47 |
Msa0697060 | Msa1111150 | 0.806938 | 6.449812e-50 | -8.615850e-47 |
Msa0729800 | Msa1111150 | 0.818885 | 1.551709e-52 | -8.615850e-47 |
Msa0731550 | Msa1111150 | 0.802788 | 4.750741e-49 | -8.615850e-47 |
Msa0731940 | Msa1111150 | 0.821260 | 4.438385e-53 | -8.615850e-47 |
Msa0733290 | Msa1111150 | 0.804557 | 2.040691e-49 | -8.615850e-47 |
Msa0735170 | Msa1111150 | 0.804517 | 2.079817e-49 | -8.615850e-47 |
Msa0743810 | Msa1111150 | 0.809596 | 1.750002e-50 | -8.615850e-47 |
Msa0762360 | Msa1111150 | 0.810139 | 1.336983e-50 | -8.615850e-47 |
Msa0766630 | Msa1111150 | 0.819759 | 9.813037e-53 | -8.615850e-47 |
Msa0783160 | Msa1111150 | 0.806428 | 8.267404e-50 | -8.615850e-47 |
Msa0808010 | Msa1111150 | 0.817989 | 2.476238e-52 | -8.615850e-47 |
Msa0808020 | Msa1111150 | 0.812027 | 5.211748e-51 | -8.615850e-47 |
Msa0810220 | Msa1111150 | 0.802641 | 5.095015e-49 | -8.615850e-47 |
Msa0142220 | Msa1111150 | 0.821052 | 4.956184e-53 | -8.615850e-47 |
Msa0200000 | Msa1111150 | 0.800839 | 1.194027e-48 | -8.615850e-47 |
Msa0231000 | Msa1111150 | 0.803097 | 4.101804e-49 | -8.615850e-47 |
Msa0384890 | Msa1111150 | 0.806307 | 8.764601e-50 | -8.615850e-47 |
Msa0394970 | Msa1111150 | 0.825080 | 5.697546e-54 | -8.615850e-47 |
Msa0402290 | Msa1111150 | 0.819309 | 1.242475e-52 | -8.615850e-47 |
Msa0411740 | Msa1111150 | 0.809107 | 2.228609e-50 | -8.615850e-47 |
Msa0414420 | Msa1111150 | 0.802390 | 5.739371e-49 | -8.615850e-47 |
Msa0435230 | Msa1111150 | 0.815041 | 1.132861e-51 | -8.615850e-47 |
Msa0440400 | Msa1111150 | 0.801217 | 9.992608e-49 | -8.615850e-47 |
Msa0444130 | Msa1111150 | 0.833012 | 6.807844e-56 | -8.615850e-47 |
Msa0452900 | Msa1111150 | 0.808148 | 3.571347e-50 | -8.615850e-47 |
Msa0453120 | Msa1111150 | 0.803200 | 3.904654e-49 | -8.615850e-47 |
Msa0479340 | Msa1111150 | 0.802517 | 5.402552e-49 | -8.615850e-47 |
Msa0983090 | Msa1111150 | 0.802916 | 4.471106e-49 | -8.615850e-47 |
Msa0989060 | Msa1111150 | 0.800058 | 1.722272e-48 | -8.615850e-47 |
Msa0998690 | Msa1111150 | 0.816217 | 6.195889e-52 | -8.615850e-47 |
Msa1000890 | Msa1111150 | 0.805648 | 1.205880e-49 | -8.615850e-47 |
Msa1014540 | Msa1111150 | 0.827513 | 1.501254e-54 | -8.615850e-47 |
Msa1016280 | Msa1111150 | 0.828187 | 1.033372e-54 | -8.615850e-47 |
Msa1025360 | Msa1111150 | 0.806014 | 1.010149e-49 | -8.615850e-47 |
Msa1025370 | Msa1111150 | 0.801887 | 7.284606e-49 | -8.615850e-47 |
Msa1029240 | Msa1111150 | 0.876323 | 1.529953e-68 | -8.615850e-47 |
Msa1044830 | Msa1111150 | 0.801477 | 8.838182e-49 | -8.615850e-47 |
Msa1044840 | Msa1111150 | 0.806610 | 7.566367e-50 | -8.615850e-47 |
Msa1065570 | Msa1111150 | 0.863570 | 2.265676e-64 | -8.615850e-47 |
Msa1100980 | Msa1111150 | 0.804704 | 1.901515e-49 | -8.615850e-47 |
Msa0267000 | Msa1111150 | 0.806671 | 7.345451e-50 | -8.615850e-47 |
Msa0267010 | Msa1111150 | 0.810593 | 1.067020e-50 | -8.615850e-47 |
Msa0306460 | Msa1111150 | 0.810742 | 9.906849e-51 | -8.615850e-47 |
Msa0309020 | Msa1111150 | 0.800024 | 1.749879e-48 | -8.615850e-47 |
Msa0342750 | Msa1111150 | 0.805440 | 1.333271e-49 | -8.615850e-47 |
Msa0355220 | Msa1111150 | 0.818616 | 1.786521e-52 | -8.615850e-47 |
Msa1109440 | Msa1111150 | 0.815151 | 1.070762e-51 | -8.615850e-47 |
Msa1111150 | Msa1121480 | 0.836623 | 8.394026e-57 | -8.615850e-47 |
Msa1111150 | Msa1121490 | 0.820214 | 7.720736e-53 | -8.615850e-47 |
Msa1111150 | Msa1137690 | 0.803662 | 3.131716e-49 | -8.615850e-47 |
Msa1111150 | Msa1150370 | 0.812466 | 4.180077e-51 | -8.615850e-47 |
Msa1111150 | Msa1154730 | 0.819820 | 9.498734e-53 | -8.615850e-47 |
Msa1111150 | Msa1187950 | 0.812214 | 4.745319e-51 | -8.615850e-47 |
Msa1111150 | Msa1195190 | 0.807846 | 4.140659e-50 | -8.615850e-47 |
Msa1111150 | Msa1284680 | 0.825659 | 4.155701e-54 | -8.615850e-47 |
Msa1111150 | Msa1285930 | 0.810119 | 1.350378e-50 | -8.615850e-47 |
Msa1111150 | Msa1287800 | 0.800139 | 1.657925e-48 | -8.615850e-47 |
Msa1111150 | Msa1287810 | 0.802872 | 4.565516e-49 | -8.615850e-47 |
Msa1111150 | Msa1320300 | 0.806972 | 6.345929e-50 | -8.615850e-47 |
Msa1111150 | Msa1340590 | 0.807696 | 4.454661e-50 | -8.615850e-47 |
Msa1111150 | Msa1344520 | 0.825349 | 4.920384e-54 | -8.615850e-47 |
Msa1111150 | Msa1366810 | 0.823506 | 1.335171e-53 | -8.615850e-47 |
Msa1111150 | Msa1373030 | 0.803960 | 2.716072e-49 | -8.615850e-47 |
Msa1111150 | Msa1382690 | 0.812044 | 5.166896e-51 | -8.615850e-47 |
Msa1111150 | Msa1397580 | 0.813117 | 3.010491e-51 | -8.615850e-47 |
Msa1111150 | Msa1397860 | 0.823472 | 1.360260e-53 | -8.615850e-47 |
Msa1111150 | Msa1422180 | 0.842707 | 2.193254e-58 | -8.615850e-47 |
Msa0491590 | Msa1111150 | 0.833650 | 4.720913e-56 | -8.615850e-47 |
Msa0502270 | Msa1111150 | 0.803604 | 3.219938e-49 | -8.615850e-47 |
Msa0502340 | Msa1111150 | 0.814043 | 1.883036e-51 | -8.615850e-47 |
Msa0518540 | Msa1111150 | 0.806276 | 8.897942e-50 | -8.615850e-47 |
Msa0532350 | Msa1111150 | 0.805335 | 1.402845e-49 | -8.615850e-47 |
Msa0596150 | Msa1111150 | 0.836299 | 1.014964e-56 | -8.615850e-47 |
Msa0598780 | Msa1111150 | 0.836787 | 7.624215e-57 | -8.615850e-47 |
Msa0846210 | Msa1111150 | 0.838997 | 2.061607e-57 | -8.615850e-47 |
Msa0848060 | Msa1111150 | 0.812889 | 3.377524e-51 | -8.615850e-47 |
Msa0858980 | Msa1111150 | 0.819527 | 1.108445e-52 | -8.615850e-47 |
Msa0888370 | Msa1111150 | 0.806910 | 6.540163e-50 | -8.615850e-47 |
Msa0899450 | Msa1111150 | 0.809633 | 1.718628e-50 | -8.615850e-47 |
Msa0907260 | Msa1111150 | 0.839629 | 1.413177e-57 | -8.615850e-47 |
Msa0918700 | Msa1111150 | 0.804555 | 2.042497e-49 | -8.615850e-47 |
Msa0931520 | Msa1111150 | 0.803689 | 3.092408e-49 | -8.615850e-47 |
Msa0956270 | Msa1111150 | 0.844451 | 7.499460e-59 | -8.615850e-47 |
Msa0976670 | Msa1111150 | 0.805357 | 1.388301e-49 | -8.615850e-47 |
Msa0979410 | Msa1111150 | 0.800535 | 1.376951e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1111150 | MtrunA17_Chr7g0246001 | 69.983 | 603 | 116 | 5 | 129 | 674 | 18 | 612 | 0.0 | 804 |
Msa1111150 | MtrunA17_Chr7g0245981 | 60.498 | 643 | 143 | 15 | 3 | 559 | 1 | 618 | 0.0 | 623 |
Msa1111150 | MtrunA17_Chr7g0245991 | 70.042 | 237 | 29 | 1 | 690 | 926 | 1 | 195 | 3.52e-98 | 305 |
Msa1111150 | MtrunA17_Chr7g0246021 | 69.714 | 175 | 18 | 4 | 84 | 251 | 25 | 171 | 5.38e-66 | 218 |
Msa1111150 | MtrunA17_Chr7g0246011 | 83.529 | 85 | 14 | 0 | 3 | 87 | 1 | 85 | 1.87e-44 | 155 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1111150 | AT1G01930.1 | 45.000 | 600 | 216 | 12 | 3 | 519 | 12 | 580 | 1.30e-148 | 452 |
Find 227 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAACTTTCAGAAGGTTTA+TGG | 0.142260 | 7_3:-56833966 | Msa1111150:CDS |
ATTCAAAACGCCGTTGTTTC+GGG | 0.187219 | 7_3:-56836689 | Msa1111150:CDS |
ACAAATCAAACGACGGAAAT+AGG | 0.190968 | 7_3:+56831361 | None:intergenic |
TGAGGATTTGAATAAAATTA+TGG | 0.201682 | 7_3:-56831622 | Msa1111150:CDS |
TTGTGATTCTTCCATTTCTT+TGG | 0.232877 | 7_3:+56833889 | None:intergenic |
CAACGAACCTGCATTTAAAA+AGG | 0.243733 | 7_3:-56834654 | Msa1111150:intron |
AAAATAGCCAATGATATTCT+TGG | 0.256295 | 7_3:-56831882 | Msa1111150:CDS |
TATTCAAAACGCCGTTGTTT+CGG | 0.260081 | 7_3:-56836690 | Msa1111150:CDS |
TTTACTTGGGAAGGTGATTA+TGG | 0.276458 | 7_3:-56831976 | Msa1111150:CDS |
GTTGGCAAGAGAGGATTTAT+TGG | 0.291660 | 7_3:-56836882 | None:intergenic |
GTGCAAGAGGTGAAGGAGTC+TGG | 0.303169 | 7_3:-56832047 | Msa1111150:CDS |
TTTGCTGGTTGTGTCTTTGA+TGG | 0.304286 | 7_3:-56835336 | Msa1111150:CDS |
AGTTGTAATGGGAGGGGAGG+GGG | 0.316803 | 7_3:+56836851 | None:intergenic |
TGTAAAGGTTATGGAACTTT+TGG | 0.318449 | 7_3:-56834065 | Msa1111150:CDS |
AGAGGAGTTCAAGACCTATT+TGG | 0.318952 | 7_3:-56832408 | Msa1111150:CDS |
TGGTGCTGCTGAAGCAAAAT+TGG | 0.321217 | 7_3:-56832348 | Msa1111150:CDS |
AACCTTCGCTCTGCTTTACT+TGG | 0.321565 | 7_3:-56831990 | Msa1111150:CDS |
GTGGCCAATGGCAGCGCTAC+AGG | 0.333066 | 7_3:-56833354 | Msa1111150:CDS |
AGCGGCTGCATGCGGTTCTA+AGG | 0.338937 | 7_3:-56832210 | Msa1111150:CDS |
GCATCCGGCAGGCACTTTGC+TGG | 0.342630 | 7_3:-56835351 | Msa1111150:CDS |
GCAATCCACAACGAAGGATA+TGG | 0.342819 | 7_3:-56831649 | Msa1111150:CDS |
CATAGGATACTAGGGTCAAC+TGG | 0.349029 | 7_3:+56834152 | None:intergenic |
TTCTTCCTTCACCTAGGAAA+TGG | 0.359298 | 7_3:-56832184 | Msa1111150:CDS |
GTTGCTCTCGTCTGCTTCAT+AGG | 0.359473 | 7_3:+56834135 | None:intergenic |
CGTCTGCTTCATAGGATACT+AGG | 0.361152 | 7_3:+56834143 | None:intergenic |
AGCTAGAGCAAAAGAATTAG+AGG | 0.361760 | 7_3:-56833596 | Msa1111150:CDS |
TCTTCCATTTCTTTGGTCAA+TGG | 0.370115 | 7_3:+56833896 | None:intergenic |
GCAATCGGCTGCGAAGGATA+TGG | 0.370770 | 7_3:-56831712 | Msa1111150:CDS |
ATGCCATTGTTAGTTGTAAT+GGG | 0.372947 | 7_3:+56836840 | None:intergenic |
TGGCTTCAAATCTTGACAAA+TGG | 0.380995 | 7_3:-56833946 | Msa1111150:CDS |
TTGTGGGACGGGAGGTTTGA+TGG | 0.384306 | 7_3:-56832110 | Msa1111150:CDS |
GGACCAATTTCAACCTGTAC+TGG | 0.385083 | 7_3:-56831955 | Msa1111150:CDS |
GCAATCCGCAGAAAAGGATA+TGG | 0.394315 | 7_3:-56831460 | Msa1111150:CDS |
CTGTGATGTGTCATGTATAT+CGG | 0.396574 | 7_3:-56835592 | Msa1111150:CDS |
TAGGTGAAACTGACAATTGC+TGG | 0.398898 | 7_3:-56835672 | Msa1111150:CDS |
ATTTCCGTCGTTTGATTTGT+CGG | 0.400918 | 7_3:-56831358 | Msa1111150:CDS |
CAAATAGAAGCATCAAAATA+AGG | 0.401001 | 7_3:+56834316 | None:intergenic |
GCAATCCGCAGTGAAGGATA+TGG | 0.401134 | 7_3:-56831523 | Msa1111150:CDS |
GCAATCCGCAGTGAAGGATA+TGG | 0.401134 | 7_3:-56831586 | Msa1111150:CDS |
TAGGATGTGAACTTGTTCTA+TGG | 0.402680 | 7_3:+56831380 | None:intergenic |
AATGGATGCCCTCAAAATTC+CGG | 0.404099 | 7_3:-56832705 | Msa1111150:CDS |
TTGCCAGCTGCCAACATGTA+TGG | 0.405673 | 7_3:+56833998 | None:intergenic |
ATCGATGAATATCAGATTTG+AGG | 0.406810 | 7_3:+56836603 | None:intergenic |
TGACAAGAGTCGAAGAAGTT+TGG | 0.407033 | 7_3:+56836770 | None:intergenic |
CAGTCAGCCATAGATGCTTC+TGG | 0.409264 | 7_3:-56834716 | Msa1111150:CDS |
GATCGATGCTGTAGCTTTAG+TGG | 0.411360 | 7_3:-56833400 | Msa1111150:CDS |
AGTTCTGCCAGAAGCATCTA+TGG | 0.413120 | 7_3:+56834709 | None:intergenic |
GTCCCAGTACAGGTTGAAAT+TGG | 0.413530 | 7_3:+56831952 | None:intergenic |
TGAAAATAACAAGGCGTTTG+AGG | 0.414931 | 7_3:-56831778 | Msa1111150:CDS |
GGCTTCAAATCTTGACAAAT+GGG | 0.418280 | 7_3:-56833945 | Msa1111150:CDS |
TGGTGATGCTGTAAAGGTTA+TGG | 0.424741 | 7_3:-56834074 | Msa1111150:CDS |
CTGTCCATTGACCAAAGAAA+TGG | 0.425063 | 7_3:-56833900 | Msa1111150:CDS |
TTCAAAGGTTGTGCAGCAAT+AGG | 0.429630 | 7_3:+56832239 | None:intergenic |
TAAAATTATGGATATGTTCA+AGG | 0.430174 | 7_3:-56831610 | Msa1111150:CDS |
CCAATGAATGTGGTTTAGTC+GGG | 0.436283 | 7_3:-56832643 | Msa1111150:CDS |
CCCGACTAAACCACATTCAT+TGG | 0.438880 | 7_3:+56832643 | None:intergenic |
AATGCCATTGTTAGTTGTAA+TGG | 0.445328 | 7_3:+56836839 | None:intergenic |
ATTGAAGGTAAATAAGAGAT+TGG | 0.447043 | 7_3:-56831841 | Msa1111150:CDS |
CATATCTCCAAGAATATCAT+TGG | 0.447674 | 7_3:+56831875 | None:intergenic |
TTGTCCGCAGGCCTACTCTC+AGG | 0.451746 | 7_3:-56834195 | Msa1111150:CDS |
GTTAGTTGTAATGGGAGGGG+AGG | 0.452204 | 7_3:+56836848 | None:intergenic |
TAGCTCACAAGACATTTCAT+AGG | 0.452294 | 7_3:-56835302 | Msa1111150:intron |
TATGAAGAAACAAATATTGA+AGG | 0.453822 | 7_3:-56831856 | Msa1111150:CDS |
GGACGGGAGGTTTGATGGAA+TGG | 0.454606 | 7_3:-56832105 | Msa1111150:CDS |
TTGCTTTCATGTCCCAGTAC+AGG | 0.457106 | 7_3:+56831942 | None:intergenic |
CCCCTTTCATCTTTAGTGCA+CGG | 0.458211 | 7_3:+56834028 | None:intergenic |
TTACATCAAGCGGCACAATC+TGG | 0.459372 | 7_3:-56834094 | Msa1111150:CDS |
CAAATCTTGACAAATGGGAT+TGG | 0.460930 | 7_3:-56833940 | Msa1111150:CDS |
TGCCAGCTGCCAACATGTAT+GGG | 0.467366 | 7_3:+56833999 | None:intergenic |
TTAGTTGTAATGGGAGGGGA+GGG | 0.472414 | 7_3:+56836849 | None:intergenic |
TCCTTCTTAATCCATTTCCT+AGG | 0.472652 | 7_3:+56832173 | None:intergenic |
TAACAAGGCGTTTGAGGAGG+AGG | 0.472688 | 7_3:-56831772 | Msa1111150:CDS |
TCGATCTGTGATGCCACAAC+TGG | 0.472726 | 7_3:+56833417 | None:intergenic |
TGATGAATTACAACAGGAAA+AGG | 0.474258 | 7_3:+56832610 | None:intergenic |
GTAAAGGAGTTGAGTCTTGT+TGG | 0.475178 | 7_3:+56834113 | None:intergenic |
AGCAGCTGACGACTGCTTGA+AGG | 0.476047 | 7_3:+56834277 | None:intergenic |
GCCAATGAATGTGGTTTAGT+CGG | 0.476670 | 7_3:-56832644 | Msa1111150:CDS |
GAAAATGAGTCTGGTAAATC+CGG | 0.482586 | 7_3:-56835546 | Msa1111150:CDS |
TTCTCTAGCCTTCGCCAAAT+AGG | 0.482653 | 7_3:+56832394 | None:intergenic |
GCGTTTGAGGAGGAGGTTGT+TGG | 0.483740 | 7_3:-56831765 | Msa1111150:CDS |
AGCATGTGATGAATTACAAC+AGG | 0.483814 | 7_3:+56832604 | None:intergenic |
CTCAGTCGGGTGTTATCCCT+TGG | 0.484250 | 7_3:+56835387 | None:intergenic |
TAGTTGTAATGGGAGGGGAG+GGG | 0.484633 | 7_3:+56836850 | None:intergenic |
CTTAACGTGCAATACATGTA+AGG | 0.488119 | 7_3:-56836660 | Msa1111150:CDS |
ATTTCTAACGCATTGTGGAT+TGG | 0.489031 | 7_3:+56834228 | None:intergenic |
AGTGTTTCGAAGCGAGGAGA+AGG | 0.490676 | 7_3:+56836740 | None:intergenic |
GATAACAGTGAAAATGAGTC+TGG | 0.491463 | 7_3:-56835555 | Msa1111150:CDS |
GATTGTGCCGCTTGATGTAA+AGG | 0.492230 | 7_3:+56834097 | None:intergenic |
CAAGGGGCAATCCGCAGAAA+AGG | 0.492268 | 7_3:-56831466 | Msa1111150:CDS |
TCCGTGCACTAAAGATGAAA+GGG | 0.494034 | 7_3:-56834029 | Msa1111150:CDS |
TTGTTCTGCTTGCATCCGGC+AGG | 0.494543 | 7_3:-56835362 | Msa1111150:CDS |
TTCGTGAACTGCTTACTGCT+TGG | 0.495769 | 7_3:-56834342 | Msa1111150:CDS |
CAGGGCAAAGAGTTTCTGTC+TGG | 0.497474 | 7_3:-56835485 | Msa1111150:CDS |
AGGATTGTTCTGCTTGCATC+CGG | 0.498509 | 7_3:-56835366 | Msa1111150:CDS |
CATTGTGGATTGGTAAAACA+TGG | 0.500416 | 7_3:+56834238 | None:intergenic |
TTGAACTCCTCTTCATTTAG+CGG | 0.504328 | 7_3:+56832419 | None:intergenic |
TGCGAAGGATATGGAAATTG+AGG | 0.504454 | 7_3:-56831703 | Msa1111150:CDS |
TATGCTGTGAGGGCCAAGGC+TGG | 0.505054 | 7_3:-56834746 | Msa1111150:CDS |
AACGAAGGATATGGAAATTG+AGG | 0.505305 | 7_3:-56831640 | Msa1111150:CDS |
ATCCGCAAGCTCAAGAGAAA+AGG | 0.505901 | 7_3:-56832308 | Msa1111150:CDS |
CACATGATGCAGAAAGAGAA+AGG | 0.508909 | 7_3:-56832751 | Msa1111150:CDS |
TCGCTCTGCTTTACTTGGGA+AGG | 0.512764 | 7_3:-56831985 | Msa1111150:CDS |
GACTGATATAGCATCATTGT+GGG | 0.514669 | 7_3:-56832126 | Msa1111150:CDS |
ACAATCTGGTGATGCTGTAA+AGG | 0.515510 | 7_3:-56834080 | Msa1111150:CDS |
CAAGGGGCAATCGGCTGCGA+AGG | 0.516725 | 7_3:-56831718 | Msa1111150:CDS |
CTCAACTCCTTTACATCAAG+CGG | 0.517214 | 7_3:-56834104 | Msa1111150:CDS |
ACCCCATACATGTTGGCAGC+TGG | 0.521233 | 7_3:-56834001 | Msa1111150:CDS |
AGAATCACAAGCTGCTATGA+AGG | 0.521983 | 7_3:-56833876 | Msa1111150:intron |
GGCATCCATTCTTCTTTCTG+TGG | 0.522288 | 7_3:+56832718 | None:intergenic |
AGAAAAGGATATGGAAATTG+AGG | 0.523362 | 7_3:-56831451 | Msa1111150:CDS |
ATTGTTAGTTGTAATGGGAG+GGG | 0.525723 | 7_3:+56836845 | None:intergenic |
ATATAGCATCATTGTGGGAC+GGG | 0.528417 | 7_3:-56832121 | Msa1111150:CDS |
GAAGGTAAATAAGAGATTGG+AGG | 0.529817 | 7_3:-56831838 | Msa1111150:CDS |
CTTTGACAAAATCAGATGTC+CGG | 0.531523 | 7_3:+56835616 | None:intergenic |
TGGCCAATGGCAGCGCTACA+GGG | 0.531730 | 7_3:-56833353 | Msa1111150:CDS |
GCAATATTTCTAACGCATTG+TGG | 0.533539 | 7_3:+56834223 | None:intergenic |
TTAATCCATTTCCTAGGTGA+AGG | 0.533602 | 7_3:+56832179 | None:intergenic |
TGTGATGTGTCATGTATATC+GGG | 0.534074 | 7_3:-56835591 | Msa1111150:CDS |
GCCACAGGCTGCTGTGAAAG+TGG | 0.535466 | 7_3:+56833449 | None:intergenic |
CGCAAGCTCAAGAGAAAAGG+TGG | 0.537712 | 7_3:-56832305 | Msa1111150:CDS |
GCTATGAAGTCCGTGGTTGA+TGG | 0.538210 | 7_3:-56831327 | Msa1111150:CDS |
AAAAGATGTGCAAGAGGTGA+AGG | 0.539732 | 7_3:-56832054 | Msa1111150:CDS |
AGATACGCTCAAGGGGCAAT+CGG | 0.540035 | 7_3:-56831727 | Msa1111150:CDS |
TAGCCCTGTAGCGCTGCCAT+TGG | 0.541641 | 7_3:+56833350 | None:intergenic |
CATTGTTAGTTGTAATGGGA+GGG | 0.541964 | 7_3:+56836844 | None:intergenic |
AGCAGAAGAAAAGAAGGCTC+AGG | 0.542170 | 7_3:-56833563 | Msa1111150:intron |
TCTTTAGAAATCGTGGCCAA+TGG | 0.542219 | 7_3:-56833366 | Msa1111150:CDS |
CTATTCGTCTGTCTTCAGAC+AGG | 0.544458 | 7_3:-56835504 | Msa1111150:CDS |
GACCAATTTCAACCTGTACT+GGG | 0.545103 | 7_3:-56831954 | Msa1111150:CDS |
CAAGAGTCGAAGAAGTTTGG+TGG | 0.545207 | 7_3:+56836773 | None:intergenic |
ACCTAGGAAATGGATTAAGA+AGG | 0.546276 | 7_3:-56832174 | Msa1111150:CDS |
AATTTCCATATCCTTCGTTG+TGG | 0.546296 | 7_3:+56831644 | None:intergenic |
ATCCCTTGGCTCAACAATCA+CGG | 0.546967 | 7_3:+56835401 | None:intergenic |
GGCAGAACTATACATTCTGC+TGG | 0.546994 | 7_3:-56834695 | Msa1111150:CDS |
AAAATTATGGATATGTTCAA+GGG | 0.549877 | 7_3:-56831609 | Msa1111150:CDS |
ACACACTGCTCTGACTCAGT+TGG | 0.550586 | 7_3:-56831811 | Msa1111150:CDS |
TGTTGTAATTCATCACATGC+TGG | 0.551145 | 7_3:-56832602 | Msa1111150:intron |
ACGTGAAGCAGAAGAAAAGA+AGG | 0.551389 | 7_3:-56833569 | Msa1111150:CDS |
AGTGAAGGATATGGAAATTG+AGG | 0.553377 | 7_3:-56831514 | Msa1111150:CDS |
AGTGAAGGATATGGAAATTG+AGG | 0.553377 | 7_3:-56831577 | Msa1111150:CDS |
GTCTGCTTCATAGGATACTA+GGG | 0.554726 | 7_3:+56834144 | None:intergenic |
AAATCAAGAAAACTTTCAGA+AGG | 0.554976 | 7_3:-56833973 | Msa1111150:CDS |
TATTACCATAGGTTGTCAAA+AGG | 0.556049 | 7_3:-56833473 | Msa1111150:intron |
ATCCGTGCACTAAAGATGAA+AGG | 0.557723 | 7_3:-56834030 | Msa1111150:CDS |
AGTCGTCAGCTGCTTTATGA+TGG | 0.557894 | 7_3:-56834268 | Msa1111150:CDS |
GAAGTGGTTGTACTATTAGC+CGG | 0.558364 | 7_3:+56832686 | None:intergenic |
AATATGATCAACGTGGTTTG+AGG | 0.558368 | 7_3:+56836709 | None:intergenic |
CTTTCAGAGGCCAATGAATG+TGG | 0.559670 | 7_3:-56832653 | Msa1111150:CDS |
CACATTCATTGGCCTCTGAA+AGG | 0.559741 | 7_3:+56832654 | None:intergenic |
AGAGGTGAAGGAGTCTGGGT+TGG | 0.561982 | 7_3:-56832042 | Msa1111150:CDS |
GTGTTTCGAAGCGAGGAGAA+GGG | 0.562329 | 7_3:+56836741 | None:intergenic |
TGGCTACTATCAGCCAGTTG+TGG | 0.562563 | 7_3:-56833430 | Msa1111150:CDS |
ATATGATCAACGTGGTTTGA+GGG | 0.562683 | 7_3:+56836710 | None:intergenic |
TGGTTGCATTCAGTTCGTCT+CGG | 0.562913 | 7_3:+56831916 | None:intergenic |
ACCTTCGCTCTGCTTTACTT+GGG | 0.564658 | 7_3:-56831989 | Msa1111150:CDS |
TGAAAGGCTATTAGCTGAAG+TGG | 0.565476 | 7_3:+56832670 | None:intergenic |
GGAGAAGTCTTGTGTCCCAA+TGG | 0.565497 | 7_3:-56832153 | Msa1111150:CDS |
AAGCAGAACAATCCTCAGTC+GGG | 0.569736 | 7_3:+56835374 | None:intergenic |
TGTCCGCAGGCCTACTCTCA+GGG | 0.570067 | 7_3:-56834194 | Msa1111150:CDS |
AATGTCTCCGCTAAATGAAG+AGG | 0.571142 | 7_3:-56832426 | Msa1111150:CDS |
GAAAAGTATAGATACGCTCA+AGG | 0.571373 | 7_3:-56831484 | Msa1111150:CDS |
GAAAAGTATAGATACGCTCA+AGG | 0.571373 | 7_3:-56831547 | Msa1111150:CDS |
GAAGCAAAATTGGACGTTAG+TGG | 0.573636 | 7_3:-56832338 | Msa1111150:CDS |
TGCAAGAGGTGAAGGAGTCT+GGG | 0.575522 | 7_3:-56832046 | Msa1111150:CDS |
ATCCGTGATTGTTGAGCCAA+GGG | 0.576904 | 7_3:-56835403 | Msa1111150:CDS |
CAAGCAGAACAATCCTCAGT+CGG | 0.578649 | 7_3:+56835373 | None:intergenic |
CAAGGGGCAATCCGCAGTGA+AGG | 0.579960 | 7_3:-56831529 | Msa1111150:CDS |
CAAGGGGCAATCCGCAGTGA+AGG | 0.579960 | 7_3:-56831592 | Msa1111150:CDS |
AATCCGTGATTGTTGAGCCA+AGG | 0.580800 | 7_3:-56835404 | Msa1111150:CDS |
GAAAAGTGTAGATACGCTCA+AGG | 0.583889 | 7_3:-56831736 | Msa1111150:CDS |
AGCTGCCACAGAAAGAAGAA+TGG | 0.586100 | 7_3:-56832723 | Msa1111150:CDS |
CCATTGTTAGTTGTAATGGG+AGG | 0.589197 | 7_3:+56836843 | None:intergenic |
GGCTGCATGCGGTTCTAAGG+TGG | 0.589865 | 7_3:-56832207 | Msa1111150:CDS |
GCAGCCGCTATGTTATTCAA+AGG | 0.590017 | 7_3:+56832224 | None:intergenic |
AGGTGAAACTGACAATTGCT+GGG | 0.590156 | 7_3:-56835671 | Msa1111150:CDS |
GGTTGAAGTGTTTCGAAGCG+AGG | 0.590259 | 7_3:+56836734 | None:intergenic |
GCCAGCTGCCAACATGTATG+GGG | 0.592155 | 7_3:+56834000 | None:intergenic |
AGACTGATATAGCATCATTG+TGG | 0.595329 | 7_3:-56832127 | Msa1111150:CDS |
GTTCAAGACCTATTTGGCGA+AGG | 0.598442 | 7_3:-56832402 | Msa1111150:CDS |
CTTATGCAGATATGCTGTGA+GGG | 0.598581 | 7_3:-56834756 | Msa1111150:intron |
AACTGGCTGATAGTAGCCAC+AGG | 0.599637 | 7_3:+56833434 | None:intergenic |
AAAAGTATAGATACGCTCAA+GGG | 0.604119 | 7_3:-56831483 | Msa1111150:CDS |
AAAAGTATAGATACGCTCAA+GGG | 0.604119 | 7_3:-56831546 | Msa1111150:CDS |
TTCAGCTAATAGCCTTTCAG+AGG | 0.604540 | 7_3:-56832666 | Msa1111150:CDS |
CAGATATGCTGTGAGGGCCA+AGG | 0.607085 | 7_3:-56834750 | Msa1111150:CDS |
CTTCACAAAAGATGTGCAAG+AGG | 0.608648 | 7_3:-56832060 | Msa1111150:CDS |
ACAACCAGCAAAGTGCCTGC+CGG | 0.610122 | 7_3:+56835347 | None:intergenic |
AAAAGTGTAGATACGCTCAA+GGG | 0.612472 | 7_3:-56831735 | Msa1111150:CDS |
GAAAAGCATAGATATGCTCA+AGG | 0.617293 | 7_3:-56831673 | Msa1111150:CDS |
TAGCATCATTGTGGGACGGG+AGG | 0.618527 | 7_3:-56832118 | Msa1111150:CDS |
GATATAGCATCATTGTGGGA+CGG | 0.618688 | 7_3:-56832122 | Msa1111150:CDS |
CAAGCTCAAGAGAAAAGGTG+GGG | 0.619925 | 7_3:-56832303 | Msa1111150:CDS |
AAAGTATAGATACGCTCAAG+GGG | 0.633488 | 7_3:-56831482 | Msa1111150:CDS |
AAAGTATAGATACGCTCAAG+GGG | 0.633488 | 7_3:-56831545 | Msa1111150:CDS |
TAAGCTAGAACCCGAAACAA+CGG | 0.636405 | 7_3:+56836679 | None:intergenic |
GGGACGAACCCCATACATGT+TGG | 0.637688 | 7_3:-56834008 | Msa1111150:CDS |
AACCGCGTCTTTAGAAATCG+TGG | 0.638015 | 7_3:-56833373 | Msa1111150:CDS |
CTTCCCTGAGAGTAGGCCTG+CGG | 0.639175 | 7_3:+56834191 | None:intergenic |
CCTCCCATTACAACTAACAA+TGG | 0.639592 | 7_3:-56836843 | Msa1111150:exon |
AAATTATGGATATGTTCAAG+GGG | 0.641969 | 7_3:-56831608 | Msa1111150:CDS |
ATAGGATACTAGGGTCAACT+GGG | 0.643353 | 7_3:+56834153 | None:intergenic |
TCCCAAGTAAAGCAGAGCGA+AGG | 0.644285 | 7_3:+56831988 | None:intergenic |
TCCGTCGTTTGATTTGTCGG+AGG | 0.644378 | 7_3:-56831355 | Msa1111150:CDS |
ACCACTTTCACAGCAGCCTG+TGG | 0.644722 | 7_3:-56833450 | Msa1111150:CDS |
GGCTGACGCTATGAAGTCCG+TGG | 0.644824 | 7_3:-56831334 | Msa1111150:CDS |
TATTCGTCTGTCTTCAGACA+GGG | 0.646496 | 7_3:-56835503 | Msa1111150:CDS |
CAATGAATGTGGTTTAGTCG+GGG | 0.653073 | 7_3:-56832642 | Msa1111150:CDS |
GCAAGCTCAAGAGAAAAGGT+GGG | 0.656480 | 7_3:-56832304 | Msa1111150:CDS |
ATATTGCTATGATTGTCCGC+AGG | 0.657275 | 7_3:-56834207 | Msa1111150:CDS |
AATAACATAGCGGCTGCATG+CGG | 0.657907 | 7_3:-56832218 | Msa1111150:CDS |
AAAGTGTAGATACGCTCAAG+GGG | 0.663205 | 7_3:-56831734 | Msa1111150:CDS |
AGGTGGTTCTTCCTTCACCT+AGG | 0.663668 | 7_3:-56832190 | Msa1111150:CDS |
AAATAACAAGGCGTTTGAGG+AGG | 0.669156 | 7_3:-56831775 | Msa1111150:CDS |
AAGCTCAAGAGAAAAGGTGG+GGG | 0.678103 | 7_3:-56832302 | Msa1111150:CDS |
CCGTGCACTAAAGATGAAAG+GGG | 0.684903 | 7_3:-56834028 | Msa1111150:CDS |
TGTTGTGCAATGATGTTCAG+AGG | 0.686426 | 7_3:-56835431 | Msa1111150:CDS |
TGATCAACGTGGTTTGAGGG+TGG | 0.689448 | 7_3:+56836713 | None:intergenic |
CAAGGTGCAATCCACAACGA+AGG | 0.693173 | 7_3:-56831655 | Msa1111150:CDS |
CAAGGGATAACACCCGACTG+AGG | 0.700185 | 7_3:-56835386 | Msa1111150:CDS |
GCCTCCGACAAATCAAACGA+CGG | 0.707717 | 7_3:+56831354 | None:intergenic |
TCTTATGCAGATATGCTGTG+AGG | 0.709561 | 7_3:-56834757 | Msa1111150:intron |
GGCCACGATTTCTAAAGACG+CGG | 0.710050 | 7_3:+56833371 | None:intergenic |
AAAAGCTAGTGAGATGCTTG+TGG | 0.710178 | 7_3:-56832018 | Msa1111150:CDS |
GGTTCTGTGTCTGAAAGTGA+CGG | 0.718841 | 7_3:+56832260 | None:intergenic |
AATTTCCATATCCTTCACTG+CGG | 0.750466 | 7_3:+56831518 | None:intergenic |
AATTTCCATATCCTTCACTG+CGG | 0.750466 | 7_3:+56831581 | None:intergenic |
ACAACCTTTGAATAACATAG+CGG | 0.758788 | 7_3:-56832228 | Msa1111150:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGTATTTTTTTTTTATGAA+AGG | + | chr7_3:56832083-56832102 | None:intergenic | 10.0% |
!! | TAATTTCTTGATAAAATTTA+AGG | - | chr7_3:56832168-56832187 | Msa1111150:CDS | 10.0% |
!! | AATTTCTTGATAAAATTTAA+GGG | - | chr7_3:56832169-56832188 | Msa1111150:CDS | 10.0% |
!!! | AATTTAAAATGATTTATGTT+TGG | - | chr7_3:56832295-56832314 | Msa1111150:CDS | 10.0% |
!! | ATAAAAATGAATAAGAAAAT+AGG | + | chr7_3:56833350-56833369 | None:intergenic | 10.0% |
!!! | TTTTATCTAAAAAAATAAAC+AGG | - | chr7_3:56835400-56835419 | Msa1111150:CDS | 10.0% |
!!! | TTTTATTCAAGCTTTTTTAT+TGG | - | chr7_3:56831685-56831704 | Msa1111150:CDS | 15.0% |
!!! | TTTATTCAAGCTTTTTTATT+GGG | - | chr7_3:56831686-56831705 | Msa1111150:CDS | 15.0% |
!! | TAAATAAGATTGAAATCTAA+GGG | + | chr7_3:56832056-56832075 | None:intergenic | 15.0% |
!! | ATAAATAAGATTGAAATCTA+AGG | + | chr7_3:56832057-56832076 | None:intergenic | 15.0% |
!!! | TCGTTACTAAATATTTTAAA+AGG | - | chr7_3:56832924-56832943 | Msa1111150:intron | 15.0% |
!! | GAGATTTATACAATAAAATA+TGG | - | chr7_3:56832971-56832990 | Msa1111150:intron | 15.0% |
!! | ATTTACTGAAAAATTGTAAA+CGG | - | chr7_3:56833383-56833402 | Msa1111150:CDS | 15.0% |
!! | ATCAATTTAGTAATGATAAT+TGG | - | chr7_3:56833672-56833691 | Msa1111150:intron | 15.0% |
!!! | TGTTTTATATTTTAATCTTC+TGG | - | chr7_3:56835370-56835389 | Msa1111150:CDS | 15.0% |
!! | AACATTACTAATTGATCTTA+TGG | - | chr7_3:56833020-56833039 | Msa1111150:intron | 20.0% |
!! | ACATTACTAATTGATCTTAT+GGG | - | chr7_3:56833021-56833040 | Msa1111150:intron | 20.0% |
!!! | TAATAAACCTTTTTAAATGC+AGG | + | chr7_3:56833545-56833564 | None:intergenic | 20.0% |
!! | ATCATTACTAAATTGATCTT+AGG | + | chr7_3:56833669-56833688 | None:intergenic | 20.0% |
!! | GTCAAAAATTATGATCAATA+GGG | + | chr7_3:56833698-56833717 | None:intergenic | 20.0% |
!! | TGTCAAAAATTATGATCAAT+AGG | + | chr7_3:56833699-56833718 | None:intergenic | 20.0% |
!! | AGAACATTAGTAAGTAAAAT+TGG | + | chr7_3:56833744-56833763 | None:intergenic | 20.0% |
!! | ATACAGTGAAAACAAATAAA+TGG | + | chr7_3:56835152-56835171 | None:intergenic | 20.0% |
!!! | AATCAATTCTGTTTTATTGT+TGG | + | chr7_3:56835316-56835335 | None:intergenic | 20.0% |
!! | TATCTAAAAAAATAAACAGG+AGG | - | chr7_3:56835403-56835422 | Msa1111150:CDS | 20.0% |
!! | AAGAATTACAGAGAAATTAT+GGG | + | chr7_3:56835713-56835732 | None:intergenic | 20.0% |
!! | AAAGAATTACAGAGAAATTA+TGG | + | chr7_3:56835714-56835733 | None:intergenic | 20.0% |
!! | TATGAAGAAACAAATATTGA+AGG | - | chr7_3:56836333-56836352 | Msa1111150:intron | 20.0% |
!! | TGAGGATTTGAATAAAATTA+TGG | - | chr7_3:56836567-56836586 | Msa1111150:intron | 20.0% |
!! | TAAAATTATGGATATGTTCA+AGG | - | chr7_3:56836579-56836598 | Msa1111150:intron | 20.0% |
!! | AAAATTATGGATATGTTCAA+GGG | - | chr7_3:56836580-56836599 | Msa1111150:intron | 20.0% |
! | AGAAAATTTCAAGAATGACA+TGG | + | chr7_3:56832206-56832225 | None:intergenic | 25.0% |
! | TTGCTCTAATTGTATATTGA+CGG | - | chr7_3:56832253-56832272 | Msa1111150:CDS | 25.0% |
! | CAAGTTAGAATAAATTCTAG+AGG | - | chr7_3:56832406-56832425 | Msa1111150:CDS | 25.0% |
! | TTATCAAGAACAATGTAAGA+AGG | + | chr7_3:56832483-56832502 | None:intergenic | 25.0% |
! | GATAAACTTATGTTGATCAT+AGG | - | chr7_3:56832498-56832517 | Msa1111150:intron | 25.0% |
! | TAAATTTCACAATGAGAATG+AGG | - | chr7_3:56833164-56833183 | Msa1111150:intron | 25.0% |
! | AAATTTCACAATGAGAATGA+GGG | - | chr7_3:56833165-56833184 | Msa1111150:intron | 25.0% |
! | AGGTATGTATGATATGATAT+AGG | + | chr7_3:56833303-56833322 | None:intergenic | 25.0% |
! | AAAATAGGAAGATAGGTATT+TGG | + | chr7_3:56833335-56833354 | None:intergenic | 25.0% |
! | GAATAAGAAAATAGGAAGAT+AGG | + | chr7_3:56833342-56833361 | None:intergenic | 25.0% |
! | TATAAATCTGAACTGACTAT+TGG | - | chr7_3:56833804-56833823 | Msa1111150:intron | 25.0% |
!!! | CAAATAGAAGCATCAAAATA+AGG | + | chr7_3:56833876-56833895 | None:intergenic | 25.0% |
! | AAATCAAGAAAACTTTCAGA+AGG | - | chr7_3:56834216-56834235 | Msa1111150:CDS | 25.0% |
! | TAAATGTTATTGGCAGTAAA+AGG | - | chr7_3:56834443-56834462 | Msa1111150:intron | 25.0% |
! | AAATGTTATTGGCAGTAAAA+GGG | - | chr7_3:56834444-56834463 | Msa1111150:intron | 25.0% |
! | TTAGATTTCTATGTAGTATG+AGG | - | chr7_3:56834663-56834682 | Msa1111150:CDS | 25.0% |
!! | ACACTATATTAGAGTCTTAT+TGG | - | chr7_3:56835010-56835029 | Msa1111150:intron | 25.0% |
! | TGCAGTATTTGTAATTAAAC+CGG | + | chr7_3:56835628-56835647 | None:intergenic | 25.0% |
! | ATTGAAGGTAAATAAGAGAT+TGG | - | chr7_3:56836348-56836367 | Msa1111150:intron | 25.0% |
! | GAAAAAGACTGAAAATAACA+AGG | - | chr7_3:56836402-56836421 | Msa1111150:intron | 25.0% |
! | AAATTATGGATATGTTCAAG+GGG | - | chr7_3:56836581-56836600 | Msa1111150:intron | 25.0% |
ATGCCATTGTTAGTTGTAAT+GGG | + | chr7_3:56831352-56831371 | None:intergenic | 30.0% | |
AATGCCATTGTTAGTTGTAA+TGG | + | chr7_3:56831353-56831372 | None:intergenic | 30.0% | |
ATCGATGAATATCAGATTTG+AGG | + | chr7_3:56831589-56831608 | None:intergenic | 30.0% | |
TACAAGATGAACATAGTGAA+GGG | + | chr7_3:56831632-56831651 | None:intergenic | 30.0% | |
TTACAAGATGAACATAGTGA+AGG | + | chr7_3:56831633-56831652 | None:intergenic | 30.0% | |
GCATGCGTAAAATAATTGTA+TGG | - | chr7_3:56831965-56831984 | Msa1111150:CDS | 30.0% | |
AGAAAGATTCAAGAATGACA+TGG | - | chr7_3:56832019-56832038 | Msa1111150:CDS | 30.0% | |
!! | AAAACAGATTTTGGTATGCT+TGG | + | chr7_3:56832457-56832476 | None:intergenic | 30.0% |
! | AGAAGGCTTAAAACAGATTT+TGG | + | chr7_3:56832466-56832485 | None:intergenic | 30.0% |
!! | CTTTTGTTTAAAGCTTTCAC+CGG | + | chr7_3:56832665-56832684 | None:intergenic | 30.0% |
TAGGTATTTGGTCAATTATG+AGG | + | chr7_3:56833323-56833342 | None:intergenic | 30.0% | |
!! | TCTTAGGAGTTCTAAAGTAT+TGG | + | chr7_3:56833653-56833672 | None:intergenic | 30.0% |
! | TGTAAAGGTTATGGAACTTT+TGG | - | chr7_3:56834124-56834143 | Msa1111150:CDS | 30.0% |
GAAAACTTTCAGAAGGTTTA+TGG | - | chr7_3:56834223-56834242 | Msa1111150:CDS | 30.0% | |
TTGTGATTCTTCCATTTCTT+TGG | + | chr7_3:56834303-56834322 | None:intergenic | 30.0% | |
AAGGTGATTCTGATATATCT+AGG | - | chr7_3:56834332-56834351 | Msa1111150:CDS | 30.0% | |
!! | GACTTGCTGATAAATGTTAT+TGG | - | chr7_3:56834433-56834452 | Msa1111150:intron | 30.0% |
TATTACCATAGGTTGTCAAA+AGG | - | chr7_3:56834716-56834735 | Msa1111150:CDS | 30.0% | |
! | CTTAGTAACTTCCCTTTTAA+GGG | + | chr7_3:56834887-56834906 | None:intergenic | 30.0% |
! | ACTTAGTAACTTCCCTTTTA+AGG | + | chr7_3:56834888-56834907 | None:intergenic | 30.0% |
!! | CATTTTGGTCACACTAAAAA+GGG | + | chr7_3:56834989-56835008 | None:intergenic | 30.0% |
! | CTCTAATATAGTGTGCATTT+TGG | + | chr7_3:56835004-56835023 | None:intergenic | 30.0% |
!! | TATCAACAGATCTTTAGAAC+TGG | - | chr7_3:56835169-56835188 | Msa1111150:intron | 30.0% |
ACAGAAGATAAATTGCAGAA+TGG | + | chr7_3:56835265-56835284 | None:intergenic | 30.0% | |
TGATGAATTACAACAGGAAA+AGG | + | chr7_3:56835582-56835601 | None:intergenic | 30.0% | |
AGTATTTGTAATTAAACCGG+TGG | + | chr7_3:56835625-56835644 | None:intergenic | 30.0% | |
TTGTCATCCATCTTAATTCT+AGG | + | chr7_3:56835682-56835701 | None:intergenic | 30.0% | |
!! | CATGTTGTTACTTGTTATGT+AGG | - | chr7_3:56835737-56835756 | Msa1111150:intron | 30.0% |
!! | AGAGACATAGTTTTGCAATT+TGG | - | chr7_3:56835821-56835840 | Msa1111150:intron | 30.0% |
ACAACCTTTGAATAACATAG+CGG | - | chr7_3:56835961-56835980 | Msa1111150:intron | 30.0% | |
! | CTATATCAGTCTTTTCCATT+GGG | + | chr7_3:56836054-56836073 | None:intergenic | 30.0% |
CATATCTCCAAGAATATCAT+TGG | + | chr7_3:56836317-56836336 | None:intergenic | 30.0% | |
! | AAAAGTATAGATACGCTCAA+GGG | - | chr7_3:56836643-56836662 | Msa1111150:CDS | 30.0% |
! | AAAAGTATAGATACGCTCAA+GGG | - | chr7_3:56836643-56836662 | Msa1111150:CDS | 30.0% |
! | AATTTCCATATCCTTTTCTG+CGG | + | chr7_3:56836737-56836756 | None:intergenic | 30.0% |
AGAAAAGGATATGGAAATTG+AGG | - | chr7_3:56836738-56836757 | Msa1111150:CDS | 30.0% | |
! | TTATCAAGGTGGTTTTTACA+AGG | - | chr7_3:56836786-56836805 | Msa1111150:CDS | 30.0% |
!!! | TATTAGTTTTCCATCAACCA+CGG | + | chr7_3:56836875-56836894 | None:intergenic | 30.0% |
! | ATTGTTAGTTGTAATGGGAG+GGG | + | chr7_3:56831347-56831366 | None:intergenic | 35.0% |
! | CATTGTTAGTTGTAATGGGA+GGG | + | chr7_3:56831348-56831367 | None:intergenic | 35.0% |
ATATGATCAACGTGGTTTGA+GGG | + | chr7_3:56831482-56831501 | None:intergenic | 35.0% | |
AATATGATCAACGTGGTTTG+AGG | + | chr7_3:56831483-56831502 | None:intergenic | 35.0% | |
!! | CGTTTTGAATATGATCAACG+TGG | + | chr7_3:56831490-56831509 | None:intergenic | 35.0% |
TATTCAAAACGCCGTTGTTT+CGG | - | chr7_3:56831499-56831518 | Msa1111150:CDS | 35.0% | |
CTTAACGTGCAATACATGTA+AGG | - | chr7_3:56831529-56831548 | Msa1111150:CDS | 35.0% | |
ACATGATTCACAATTCACGT+TGG | - | chr7_3:56831738-56831757 | Msa1111150:CDS | 35.0% | |
! | GTACTGAATTTTTCTCGTGT+TGG | + | chr7_3:56831775-56831794 | None:intergenic | 35.0% |
GAGAAAAATTCAGTACGCAT+GGG | - | chr7_3:56831779-56831798 | Msa1111150:CDS | 35.0% | |
AGTACTAAAGCAAACGTGTA+TGG | + | chr7_3:56831815-56831834 | None:intergenic | 35.0% | |
CACGTTTGCTTTAGTACTAT+AGG | - | chr7_3:56831817-56831836 | Msa1111150:CDS | 35.0% | |
ATGACGTAACAACTCATCAT+TGG | + | chr7_3:56831875-56831894 | None:intergenic | 35.0% | |
TTGACGTGACAATACATCAT+TGG | - | chr7_3:56831940-56831959 | Msa1111150:CDS | 35.0% | |
TAGCCAATAAAATCTCAACC+TGG | + | chr7_3:56832133-56832152 | None:intergenic | 35.0% | |
AGCATAAAAATCACCACGTT+TGG | - | chr7_3:56832355-56832374 | Msa1111150:CDS | 35.0% | |
ATAAAAATCACCACGTTTGG+AGG | - | chr7_3:56832358-56832377 | Msa1111150:CDS | 35.0% | |
! | AAACCTGTTCTAAATGAGGA+CGG | - | chr7_3:56832431-56832450 | Msa1111150:CDS | 35.0% |
GAAAAATACTGTGAAGGAAG+AGG | - | chr7_3:56832540-56832559 | Msa1111150:intron | 35.0% | |
CTTTGACAAAATCAGATGTC+CGG | + | chr7_3:56832576-56832595 | None:intergenic | 35.0% | |
CTGTGATGTGTCATGTATAT+CGG | - | chr7_3:56832597-56832616 | Msa1111150:intron | 35.0% | |
TGTGATGTGTCATGTATATC+GGG | - | chr7_3:56832598-56832617 | Msa1111150:intron | 35.0% | |
GATAACAGTGAAAATGAGTC+TGG | - | chr7_3:56832634-56832653 | Msa1111150:CDS | 35.0% | |
GAAAATGAGTCTGGTAAATC+CGG | - | chr7_3:56832643-56832662 | Msa1111150:CDS | 35.0% | |
TAGCTCACAAGACATTTCAT+AGG | - | chr7_3:56832887-56832906 | Msa1111150:intron | 35.0% | |
AGTTTCTCCAGATAGTTGTT+TGG | - | chr7_3:56833219-56833238 | Msa1111150:intron | 35.0% | |
AGAAAAGCCAAACAACTATC+TGG | + | chr7_3:56833229-56833248 | None:intergenic | 35.0% | |
CAACGAACCTGCATTTAAAA+AGG | - | chr7_3:56833535-56833554 | Msa1111150:intron | 35.0% | |
TATTGGCATGCTCATATTGT+AGG | - | chr7_3:56833821-56833840 | Msa1111150:intron | 35.0% | |
!! | CATTGTGGATTGGTAAAACA+TGG | + | chr7_3:56833954-56833973 | None:intergenic | 35.0% |
ATTTCTAACGCATTGTGGAT+TGG | + | chr7_3:56833964-56833983 | None:intergenic | 35.0% | |
! | GCAATATTTCTAACGCATTG+TGG | + | chr7_3:56833969-56833988 | None:intergenic | 35.0% |
!!! | GTTATGGAACTTTTGGAACA+GGG | - | chr7_3:56834131-56834150 | Msa1111150:CDS | 35.0% |
TGGCTTCAAATCTTGACAAA+TGG | - | chr7_3:56834243-56834262 | Msa1111150:CDS | 35.0% | |
GGCTTCAAATCTTGACAAAT+GGG | - | chr7_3:56834244-56834263 | Msa1111150:CDS | 35.0% | |
CAAATCTTGACAAATGGGAT+TGG | - | chr7_3:56834249-56834268 | Msa1111150:CDS | 35.0% | |
TCTTCCATTTCTTTGGTCAA+TGG | + | chr7_3:56834296-56834315 | None:intergenic | 35.0% | |
AGCTAGAGCAAAAGAATTAG+AGG | - | chr7_3:56834593-56834612 | Msa1111150:intron | 35.0% | |
! | GGTCTTGTAGATATTACCAT+AGG | - | chr7_3:56834705-56834724 | Msa1111150:CDS | 35.0% |
AACCCTAAATGACCCTTAAA+AGG | - | chr7_3:56834872-56834891 | Msa1111150:intron | 35.0% | |
ACCCTAAATGACCCTTAAAA+GGG | - | chr7_3:56834873-56834892 | Msa1111150:intron | 35.0% | |
!! | TCCCTTTTAAGGGTCATTTA+GGG | + | chr7_3:56834877-56834896 | None:intergenic | 35.0% |
!! | TTCCCTTTTAAGGGTCATTT+AGG | + | chr7_3:56834878-56834897 | None:intergenic | 35.0% |
!! | GCATTTTGGTCACACTAAAA+AGG | + | chr7_3:56834990-56835009 | None:intergenic | 35.0% |
! | ACTATTAGCCGGAATTTTGA+GGG | + | chr7_3:56835495-56835514 | None:intergenic | 35.0% |
! | TACTATTAGCCGGAATTTTG+AGG | + | chr7_3:56835496-56835515 | None:intergenic | 35.0% |
AGCATGTGATGAATTACAAC+AGG | + | chr7_3:56835588-56835607 | None:intergenic | 35.0% | |
TGTTGTAATTCATCACATGC+TGG | - | chr7_3:56835587-56835606 | Msa1111150:CDS | 35.0% | |
TTGTAATTAAACCGGTGGAA+AGG | + | chr7_3:56835620-56835639 | None:intergenic | 35.0% | |
AGGAGATCCTAGAATTAAGA+TGG | - | chr7_3:56835672-56835691 | Msa1111150:CDS | 35.0% | |
TTGAACTCCTCTTCATTTAG+CGG | + | chr7_3:56835773-56835792 | None:intergenic | 35.0% | |
TTAATCCATTTCCTAGGTGA+AGG | + | chr7_3:56836013-56836032 | None:intergenic | 35.0% | |
!! | ACCTAGGAAATGGATTAAGA+AGG | - | chr7_3:56836015-56836034 | Msa1111150:intron | 35.0% |
TCCTTCTTAATCCATTTCCT+AGG | + | chr7_3:56836019-56836038 | None:intergenic | 35.0% | |
! | GCTATATCAGTCTTTTCCAT+TGG | + | chr7_3:56836055-56836074 | None:intergenic | 35.0% |
AGACTGATATAGCATCATTG+TGG | - | chr7_3:56836062-56836081 | Msa1111150:intron | 35.0% | |
GACTGATATAGCATCATTGT+GGG | - | chr7_3:56836063-56836082 | Msa1111150:intron | 35.0% | |
!! | GTTTGATGGAATGGATTTTG+TGG | - | chr7_3:56836093-56836112 | Msa1111150:intron | 35.0% |
TTTACTTGGGAAGGTGATTA+TGG | - | chr7_3:56836213-56836232 | Msa1111150:intron | 35.0% | |
GAAGGTAAATAAGAGATTGG+AGG | - | chr7_3:56836351-56836370 | Msa1111150:intron | 35.0% | |
! | TGAAAATAACAAGGCGTTTG+AGG | - | chr7_3:56836411-56836430 | Msa1111150:intron | 35.0% |
! | AAAAGTGTAGATACGCTCAA+GGG | - | chr7_3:56836454-56836473 | Msa1111150:intron | 35.0% |
! | GAAAAGCATAGATATGCTCA+AGG | - | chr7_3:56836516-56836535 | Msa1111150:intron | 35.0% |
AATTTCCATATCCTTCGTTG+TGG | + | chr7_3:56836548-56836567 | None:intergenic | 35.0% | |
AACGAAGGATATGGAAATTG+AGG | - | chr7_3:56836549-56836568 | Msa1111150:intron | 35.0% | |
AATTTCCATATCCTTCACTG+CGG | + | chr7_3:56836611-56836630 | None:intergenic | 35.0% | |
AGTGAAGGATATGGAAATTG+AGG | - | chr7_3:56836612-56836631 | Msa1111150:CDS | 35.0% | |
! | GAAAAGTATAGATACGCTCA+AGG | - | chr7_3:56836642-56836661 | Msa1111150:CDS | 35.0% |
AAAGTATAGATACGCTCAAG+GGG | - | chr7_3:56836644-56836663 | Msa1111150:CDS | 35.0% | |
AATTTCCATATCCTTCACTG+CGG | + | chr7_3:56836611-56836630 | None:intergenic | 35.0% | |
AGTGAAGGATATGGAAATTG+AGG | - | chr7_3:56836612-56836631 | Msa1111150:CDS | 35.0% | |
! | GAAAAGTATAGATACGCTCA+AGG | - | chr7_3:56836642-56836661 | Msa1111150:CDS | 35.0% |
AAAGTATAGATACGCTCAAG+GGG | - | chr7_3:56836644-56836663 | Msa1111150:CDS | 35.0% | |
! | TAGGATGTGAACTTGTTCTA+TGG | + | chr7_3:56836812-56836831 | None:intergenic | 35.0% |
ACAAATCAAACGACGGAAAT+AGG | + | chr7_3:56836831-56836850 | None:intergenic | 35.0% | |
!! | ATTTCCGTCGTTTGATTTGT+CGG | - | chr7_3:56836831-56836850 | Msa1111150:exon | 35.0% |
! | CCATTGTTAGTTGTAATGGG+AGG | + | chr7_3:56831349-56831368 | None:intergenic | 40.0% |
CCTCCCATTACAACTAACAA+TGG | - | chr7_3:56831346-56831365 | Msa1111150:CDS | 40.0% | |
TGACAAGAGTCGAAGAAGTT+TGG | + | chr7_3:56831422-56831441 | None:intergenic | 40.0% | |
! | ATTCAAAACGCCGTTGTTTC+GGG | - | chr7_3:56831500-56831519 | Msa1111150:CDS | 40.0% |
TAAGCTAGAACCCGAAACAA+CGG | + | chr7_3:56831513-56831532 | None:intergenic | 40.0% | |
CGAGAAAAATTCAGTACGCA+TGG | - | chr7_3:56831778-56831797 | Msa1111150:CDS | 40.0% | |
AACAACTCATCATTGGATGC+AGG | + | chr7_3:56831868-56831887 | None:intergenic | 40.0% | |
CAATAAAATCTCAACCTGGC+CGG | + | chr7_3:56832129-56832148 | None:intergenic | 40.0% | |
!! | TTAGCTTTTTCCTCCAAACG+TGG | + | chr7_3:56832371-56832390 | None:intergenic | 40.0% |
! | GGCAAAACCTGTTCTAAATG+AGG | - | chr7_3:56832427-56832446 | Msa1111150:CDS | 40.0% |
TAGGTGAAACTGACAATTGC+TGG | - | chr7_3:56832517-56832536 | Msa1111150:intron | 40.0% | |
AGGTGAAACTGACAATTGCT+GGG | - | chr7_3:56832518-56832537 | Msa1111150:intron | 40.0% | |
TGCTGGGAAAAATACTGTGA+AGG | - | chr7_3:56832534-56832553 | Msa1111150:intron | 40.0% | |
! | TGTGAAGGAAGAGGATTTTG+AGG | - | chr7_3:56832549-56832568 | Msa1111150:intron | 40.0% |
TATTCGTCTGTCTTCAGACA+GGG | - | chr7_3:56832686-56832705 | Msa1111150:CDS | 40.0% | |
TGTTGTGCAATGATGTTCAG+AGG | - | chr7_3:56832758-56832777 | Msa1111150:CDS | 40.0% | |
! | TTTGCTGGTTGTGTCTTTGA+TGG | - | chr7_3:56832853-56832872 | Msa1111150:intron | 40.0% |
TCTTATGCAGATATGCTGTG+AGG | - | chr7_3:56833432-56833451 | Msa1111150:CDS | 40.0% | |
CTTATGCAGATATGCTGTGA+GGG | - | chr7_3:56833433-56833452 | Msa1111150:CDS | 40.0% | |
!!! | TGACTGTTTTTTTCCAGCCT+TGG | + | chr7_3:56833459-56833478 | None:intergenic | 40.0% |
ATATTGCTATGATTGTCCGC+AGG | - | chr7_3:56833982-56834001 | Msa1111150:CDS | 40.0% | |
ATAGGATACTAGGGTCAACT+GGG | + | chr7_3:56834039-56834058 | None:intergenic | 40.0% | |
GTCTGCTTCATAGGATACTA+GGG | + | chr7_3:56834048-56834067 | None:intergenic | 40.0% | |
! | GTAAAGGAGTTGAGTCTTGT+TGG | + | chr7_3:56834079-56834098 | None:intergenic | 40.0% |
CTCAACTCCTTTACATCAAG+CGG | - | chr7_3:56834085-56834104 | Msa1111150:CDS | 40.0% | |
! | ACAATCTGGTGATGCTGTAA+AGG | - | chr7_3:56834109-56834128 | Msa1111150:CDS | 40.0% |
! | TGGTGATGCTGTAAAGGTTA+TGG | - | chr7_3:56834115-56834134 | Msa1111150:CDS | 40.0% |
!!! | GGTTATGGAACTTTTGGAAC+AGG | - | chr7_3:56834130-56834149 | Msa1111150:CDS | 40.0% |
ATCCGTGCACTAAAGATGAA+AGG | - | chr7_3:56834159-56834178 | Msa1111150:CDS | 40.0% | |
TCCGTGCACTAAAGATGAAA+GGG | - | chr7_3:56834160-56834179 | Msa1111150:CDS | 40.0% | |
CTGTCCATTGACCAAAGAAA+TGG | - | chr7_3:56834289-56834308 | Msa1111150:CDS | 40.0% | |
AGAATCACAAGCTGCTATGA+AGG | - | chr7_3:56834313-56834332 | Msa1111150:CDS | 40.0% | |
!!! | TTTTGCTCTAGCTCTTCTCT+TGG | + | chr7_3:56834586-56834605 | None:intergenic | 40.0% |
ACGTGAAGCAGAAGAAAAGA+AGG | - | chr7_3:56834620-56834639 | Msa1111150:intron | 40.0% | |
AGACCTAGAAAACAAACGTG+AGG | + | chr7_3:56834690-56834709 | None:intergenic | 40.0% | |
! | TCTTTAGAAATCGTGGCCAA+TGG | - | chr7_3:56834823-56834842 | Msa1111150:intron | 40.0% |
AAAGGGAAGTTACTAAGTCG+CGG | - | chr7_3:56834890-56834909 | Msa1111150:intron | 40.0% | |
CACATGATGCAGAAAGAGAA+AGG | - | chr7_3:56835438-56835457 | Msa1111150:CDS | 40.0% | |
AATGGATGCCCTCAAAATTC+CGG | - | chr7_3:56835484-56835503 | Msa1111150:CDS | 40.0% | |
GAAGTGGTTGTACTATTAGC+CGG | + | chr7_3:56835506-56835525 | None:intergenic | 40.0% | |
TGAAAGGCTATTAGCTGAAG+TGG | + | chr7_3:56835522-56835541 | None:intergenic | 40.0% | |
TTCAGCTAATAGCCTTTCAG+AGG | - | chr7_3:56835523-56835542 | Msa1111150:CDS | 40.0% | |
GCCAATGAATGTGGTTTAGT+CGG | - | chr7_3:56835545-56835564 | Msa1111150:CDS | 40.0% | |
CCAATGAATGTGGTTTAGTC+GGG | - | chr7_3:56835546-56835565 | Msa1111150:CDS | 40.0% | |
CAATGAATGTGGTTTAGTCG+GGG | - | chr7_3:56835547-56835566 | Msa1111150:CDS | 40.0% | |
TTCATGCATGCATGTTCACA+AGG | - | chr7_3:56835652-56835671 | Msa1111150:CDS | 40.0% | |
AATGTCTCCGCTAAATGAAG+AGG | - | chr7_3:56835763-56835782 | Msa1111150:intron | 40.0% | |
AGAGGAGTTCAAGACCTATT+TGG | - | chr7_3:56835781-56835800 | Msa1111150:intron | 40.0% | |
GAAGCAAAATTGGACGTTAG+TGG | - | chr7_3:56835851-56835870 | Msa1111150:intron | 40.0% | |
TTCAAAGGTTGTGCAGCAAT+AGG | + | chr7_3:56835953-56835972 | None:intergenic | 40.0% | |
TTCTTCCTTCACCTAGGAAA+TGG | - | chr7_3:56836005-56836024 | Msa1111150:intron | 40.0% | |
GATATAGCATCATTGTGGGA+CGG | - | chr7_3:56836067-56836086 | Msa1111150:intron | 40.0% | |
ATATAGCATCATTGTGGGAC+GGG | - | chr7_3:56836068-56836087 | Msa1111150:intron | 40.0% | |
CTTCACAAAAGATGTGCAAG+AGG | - | chr7_3:56836129-56836148 | Msa1111150:intron | 40.0% | |
AAAAGATGTGCAAGAGGTGA+AGG | - | chr7_3:56836135-56836154 | Msa1111150:intron | 40.0% | |
AAAAGCTAGTGAGATGCTTG+TGG | - | chr7_3:56836171-56836190 | Msa1111150:intron | 40.0% | |
GACCAATTTCAACCTGTACT+GGG | - | chr7_3:56836235-56836254 | Msa1111150:intron | 40.0% | |
! | AAATAACAAGGCGTTTGAGG+AGG | - | chr7_3:56836414-56836433 | Msa1111150:intron | 40.0% |
! | GAAAAGTGTAGATACGCTCA+AGG | - | chr7_3:56836453-56836472 | Msa1111150:intron | 40.0% |
AAAGTGTAGATACGCTCAAG+GGG | - | chr7_3:56836455-56836474 | Msa1111150:intron | 40.0% | |
TGCGAAGGATATGGAAATTG+AGG | - | chr7_3:56836486-56836505 | Msa1111150:intron | 40.0% | |
!! | GACGCTGCATTTTGTTATCA+AGG | - | chr7_3:56836772-56836791 | Msa1111150:CDS | 40.0% |
!! | GCTGCATTTTGTTATCAAGG+TGG | - | chr7_3:56836775-56836794 | Msa1111150:CDS | 40.0% |
! | TTAGTTGTAATGGGAGGGGA+GGG | + | chr7_3:56831343-56831362 | None:intergenic | 45.0% |
CAAGAGTCGAAGAAGTTTGG+TGG | + | chr7_3:56831419-56831438 | None:intergenic | 45.0% | |
ACCAATCACCCCATGATTTC+CGG | - | chr7_3:56832107-56832126 | Msa1111150:CDS | 45.0% | |
!! | CGGCCAGGTTGAGATTTTAT+TGG | - | chr7_3:56832127-56832146 | Msa1111150:CDS | 45.0% |
!! | AGGAAGAGGATTTTGAGGAC+CGG | - | chr7_3:56832554-56832573 | Msa1111150:intron | 45.0% |
CTATTCGTCTGTCTTCAGAC+AGG | - | chr7_3:56832685-56832704 | Msa1111150:CDS | 45.0% | |
AATCCGTGATTGTTGAGCCA+AGG | - | chr7_3:56832785-56832804 | Msa1111150:intron | 45.0% | |
ATCCGTGATTGTTGAGCCAA+GGG | - | chr7_3:56832786-56832805 | Msa1111150:intron | 45.0% | |
ATCCCTTGGCTCAACAATCA+CGG | + | chr7_3:56832791-56832810 | None:intergenic | 45.0% | |
AAGCAGAACAATCCTCAGTC+GGG | + | chr7_3:56832818-56832837 | None:intergenic | 45.0% | |
CAAGCAGAACAATCCTCAGT+CGG | + | chr7_3:56832819-56832838 | None:intergenic | 45.0% | |
AGGATTGTTCTGCTTGCATC+CGG | - | chr7_3:56832823-56832842 | Msa1111150:intron | 45.0% | |
TGATATAGGTCATACCGCCT+TGG | + | chr7_3:56833289-56833308 | None:intergenic | 45.0% | |
!! | AGTTCTGCCAGAAGCATCTA+TGG | + | chr7_3:56833483-56833502 | None:intergenic | 45.0% |
GGCAGAACTATACATTCTGC+TGG | - | chr7_3:56833494-56833513 | Msa1111150:intron | 45.0% | |
TTCGTGAACTGCTTACTGCT+TGG | - | chr7_3:56833847-56833866 | Msa1111150:intron | 45.0% | |
! | AGTCGTCAGCTGCTTTATGA+TGG | - | chr7_3:56833921-56833940 | Msa1111150:CDS | 45.0% |
CATAGGATACTAGGGTCAAC+TGG | + | chr7_3:56834040-56834059 | None:intergenic | 45.0% | |
CGTCTGCTTCATAGGATACT+AGG | + | chr7_3:56834049-56834068 | None:intergenic | 45.0% | |
!! | GATTGTGCCGCTTGATGTAA+AGG | + | chr7_3:56834095-56834114 | None:intergenic | 45.0% |
TTACATCAAGCGGCACAATC+TGG | - | chr7_3:56834095-56834114 | Msa1111150:CDS | 45.0% | |
CCCCTTTCATCTTTAGTGCA+CGG | + | chr7_3:56834164-56834183 | None:intergenic | 45.0% | |
CCGTGCACTAAAGATGAAAG+GGG | - | chr7_3:56834161-56834180 | Msa1111150:CDS | 45.0% | |
TTGGCAGTAAAAGGGAGACT+AGG | - | chr7_3:56834452-56834471 | Msa1111150:intron | 45.0% | |
TGGCAGTAAAAGGGAGACTA+GGG | - | chr7_3:56834453-56834472 | Msa1111150:intron | 45.0% | |
! | GCCTTCTTTTGTGCATGTAC+AGG | - | chr7_3:56834547-56834566 | Msa1111150:intron | 45.0% |
GCCTGTACATGCACAAAAGA+AGG | + | chr7_3:56834551-56834570 | None:intergenic | 45.0% | |
AGCAGAAGAAAAGAAGGCTC+AGG | - | chr7_3:56834626-56834645 | Msa1111150:intron | 45.0% | |
!! | GGACCTCACGTTTGTTTTCT+AGG | - | chr7_3:56834684-56834703 | Msa1111150:CDS | 45.0% |
! | GTGGTCCTTTTGACAACCTA+TGG | + | chr7_3:56834724-56834743 | None:intergenic | 45.0% |
!! | GATCGATGCTGTAGCTTTAG+TGG | - | chr7_3:56834789-56834808 | Msa1111150:intron | 45.0% |
! | AACCGCGTCTTTAGAAATCG+TGG | - | chr7_3:56834816-56834835 | Msa1111150:intron | 45.0% |
! | TGGGCATTTTACTTCCTAGC+TGG | - | chr7_3:56834924-56834943 | Msa1111150:intron | 45.0% |
! | GGGCATTTTACTTCCTAGCT+GGG | - | chr7_3:56834925-56834944 | Msa1111150:intron | 45.0% |
TGAAGAGAAACCAGAGAGAC+AGG | + | chr7_3:56834966-56834985 | None:intergenic | 45.0% | |
AGCTGCCACAGAAAGAAGAA+TGG | - | chr7_3:56835466-56835485 | Msa1111150:CDS | 45.0% | |
GGCATCCATTCTTCTTTCTG+TGG | + | chr7_3:56835474-56835493 | None:intergenic | 45.0% | |
! | CACATTCATTGGCCTCTGAA+AGG | + | chr7_3:56835538-56835557 | None:intergenic | 45.0% |
CTTTCAGAGGCCAATGAATG+TGG | - | chr7_3:56835536-56835555 | Msa1111150:CDS | 45.0% | |
CCCGACTAAACCACATTCAT+TGG | + | chr7_3:56835549-56835568 | None:intergenic | 45.0% | |
CTGGTAAAGTTCCTTTCCAC+CGG | - | chr7_3:56835606-56835625 | Msa1111150:CDS | 45.0% | |
GTTCAAGACCTATTTGGCGA+AGG | - | chr7_3:56835787-56835806 | Msa1111150:intron | 45.0% | |
! | TTCTCTAGCCTTCGCCAAAT+AGG | + | chr7_3:56835798-56835817 | None:intergenic | 45.0% |
!! | TGGTGCTGCTGAAGCAAAAT+TGG | - | chr7_3:56835841-56835860 | Msa1111150:intron | 45.0% |
ATCCGCAAGCTCAAGAGAAA+AGG | - | chr7_3:56835881-56835900 | Msa1111150:intron | 45.0% | |
! | CACCTTTTCTCTTGAGCTTG+CGG | + | chr7_3:56835886-56835905 | None:intergenic | 45.0% |
GCAAGCTCAAGAGAAAAGGT+GGG | - | chr7_3:56835885-56835904 | Msa1111150:intron | 45.0% | |
CAAGCTCAAGAGAAAAGGTG+GGG | - | chr7_3:56835886-56835905 | Msa1111150:intron | 45.0% | |
AAGCTCAAGAGAAAAGGTGG+GGG | - | chr7_3:56835887-56835906 | Msa1111150:intron | 45.0% | |
AAAAGGTGGGGGAAACTCAA+AGG | - | chr7_3:56835898-56835917 | Msa1111150:intron | 45.0% | |
GGTTCTGTGTCTGAAAGTGA+CGG | + | chr7_3:56835932-56835951 | None:intergenic | 45.0% | |
GCAGCCGCTATGTTATTCAA+AGG | + | chr7_3:56835968-56835987 | None:intergenic | 45.0% | |
AATAACATAGCGGCTGCATG+CGG | - | chr7_3:56835971-56835990 | Msa1111150:intron | 45.0% | |
AACCTTCGCTCTGCTTTACT+TGG | - | chr7_3:56836199-56836218 | Msa1111150:intron | 45.0% | |
ACCTTCGCTCTGCTTTACTT+GGG | - | chr7_3:56836200-56836219 | Msa1111150:intron | 45.0% | |
GGACCAATTTCAACCTGTAC+TGG | - | chr7_3:56836234-56836253 | Msa1111150:intron | 45.0% | |
! | GTCCCAGTACAGGTTGAAAT+TGG | + | chr7_3:56836240-56836259 | None:intergenic | 45.0% |
TTGCTTTCATGTCCCAGTAC+AGG | + | chr7_3:56836250-56836269 | None:intergenic | 45.0% | |
TGGTTGCATTCAGTTCGTCT+CGG | + | chr7_3:56836276-56836295 | None:intergenic | 45.0% | |
GCAATCCACAACGAAGGATA+TGG | - | chr7_3:56836540-56836559 | Msa1111150:intron | 45.0% | |
GCAATCCGCAGAAAAGGATA+TGG | - | chr7_3:56836729-56836748 | Msa1111150:CDS | 45.0% | |
! | TAGTTGTAATGGGAGGGGAG+GGG | + | chr7_3:56831342-56831361 | None:intergenic | 50.0% |
! | GTTAGTTGTAATGGGAGGGG+AGG | + | chr7_3:56831344-56831363 | None:intergenic | 50.0% |
GTGTTTCGAAGCGAGGAGAA+GGG | + | chr7_3:56831451-56831470 | None:intergenic | 50.0% | |
AGTGTTTCGAAGCGAGGAGA+AGG | + | chr7_3:56831452-56831471 | None:intergenic | 50.0% | |
! | GGTTGAAGTGTTTCGAAGCG+AGG | + | chr7_3:56831458-56831477 | None:intergenic | 50.0% |
TGATCAACGTGGTTTGAGGG+TGG | + | chr7_3:56831479-56831498 | None:intergenic | 50.0% | |
TCAACCTGGCCGGAAATCAT+GGG | + | chr7_3:56832119-56832138 | None:intergenic | 50.0% | |
! | TGGCCGTCCTCATTTAGAAC+AGG | + | chr7_3:56832437-56832456 | None:intergenic | 50.0% |
CAGGGCAAAGAGTTTCTGTC+TGG | - | chr7_3:56832704-56832723 | Msa1111150:CDS | 50.0% | |
! | TCTTTTTCTTTCCTGCCCCC+AGG | - | chr7_3:56833254-56833273 | Msa1111150:intron | 50.0% |
CCTTGGAACACAAAACCTGG+GGG | + | chr7_3:56833272-56833291 | None:intergenic | 50.0% | |
GCCTTGGAACACAAAACCTG+GGG | + | chr7_3:56833273-56833292 | None:intergenic | 50.0% | |
CGCCTTGGAACACAAAACCT+GGG | + | chr7_3:56833274-56833293 | None:intergenic | 50.0% | |
!! | CCAGGTTTTGTGTTCCAAGG+CGG | - | chr7_3:56833272-56833291 | Msa1111150:intron | 50.0% |
CAGTCAGCCATAGATGCTTC+TGG | - | chr7_3:56833473-56833492 | Msa1111150:intron | 50.0% | |
! | CGTTTTGCTTCCCTGAGAGT+AGG | + | chr7_3:56834008-56834027 | None:intergenic | 50.0% |
GTTGCTCTCGTCTGCTTCAT+AGG | + | chr7_3:56834057-56834076 | None:intergenic | 50.0% | |
!!! | GGAACTTTTGGAACAGGGCT+TGG | - | chr7_3:56834136-56834155 | Msa1111150:CDS | 50.0% |
TGCCAGCTGCCAACATGTAT+GGG | + | chr7_3:56834193-56834212 | None:intergenic | 50.0% | |
TTGCCAGCTGCCAACATGTA+TGG | + | chr7_3:56834194-56834213 | None:intergenic | 50.0% | |
AACTGGCTGATAGTAGCCAC+AGG | + | chr7_3:56834758-56834777 | None:intergenic | 50.0% | |
TGGCTACTATCAGCCAGTTG+TGG | - | chr7_3:56834759-56834778 | Msa1111150:intron | 50.0% | |
TCGATCTGTGATGCCACAAC+TGG | + | chr7_3:56834775-56834794 | None:intergenic | 50.0% | |
! | GGCCACGATTTCTAAAGACG+CGG | + | chr7_3:56834821-56834840 | None:intergenic | 50.0% |
GGAAGTTACTAAGTCGCGGA+GGG | - | chr7_3:56834894-56834913 | Msa1111150:intron | 50.0% | |
GAAGTTACTAAGTCGCGGAG+GGG | - | chr7_3:56834895-56834914 | Msa1111150:intron | 50.0% | |
AAGTTACTAAGTCGCGGAGG+GGG | - | chr7_3:56834896-56834915 | Msa1111150:intron | 50.0% | |
CGCAAGCTCAAGAGAAAAGG+TGG | - | chr7_3:56835884-56835903 | Msa1111150:intron | 50.0% | |
AGGTGGTTCTTCCTTCACCT+AGG | - | chr7_3:56835999-56836018 | Msa1111150:intron | 50.0% | |
! | GGAGAAGTCTTGTGTCCCAA+TGG | - | chr7_3:56836036-56836055 | Msa1111150:intron | 50.0% |
TGCAAGAGGTGAAGGAGTCT+GGG | - | chr7_3:56836143-56836162 | Msa1111150:intron | 50.0% | |
TCCCAAGTAAAGCAGAGCGA+AGG | + | chr7_3:56836204-56836223 | None:intergenic | 50.0% | |
TCGCTCTGCTTTACTTGGGA+AGG | - | chr7_3:56836204-56836223 | Msa1111150:intron | 50.0% | |
ACACACTGCTCTGACTCAGT+TGG | - | chr7_3:56836378-56836397 | Msa1111150:intron | 50.0% | |
! | TAACAAGGCGTTTGAGGAGG+AGG | - | chr7_3:56836417-56836436 | Msa1111150:intron | 50.0% |
AGATACGCTCAAGGGGCAAT+CGG | - | chr7_3:56836462-56836481 | Msa1111150:intron | 50.0% | |
CAAGGTGCAATCCACAACGA+AGG | - | chr7_3:56836534-56836553 | Msa1111150:intron | 50.0% | |
GCAATCCGCAGTGAAGGATA+TGG | - | chr7_3:56836603-56836622 | Msa1111150:CDS | 50.0% | |
GCAATCCGCAGTGAAGGATA+TGG | - | chr7_3:56836603-56836622 | Msa1111150:CDS | 50.0% | |
!! | TCCGTCGTTTGATTTGTCGG+AGG | - | chr7_3:56836834-56836853 | Msa1111150:exon | 50.0% |
GCCTCCGACAAATCAAACGA+CGG | + | chr7_3:56836838-56836857 | None:intergenic | 50.0% | |
GCTATGAAGTCCGTGGTTGA+TGG | - | chr7_3:56836862-56836881 | Msa1111150:five_prime_UTR | 50.0% | |
! | AGTTGTAATGGGAGGGGAGG+GGG | + | chr7_3:56831341-56831360 | None:intergenic | 55.0% |
GCCGGAAATCATGGGGTGAT+TGG | + | chr7_3:56832111-56832130 | None:intergenic | 55.0% | |
CAACCTGGCCGGAAATCATG+GGG | + | chr7_3:56832118-56832137 | None:intergenic | 55.0% | |
CTCAACCTGGCCGGAAATCA+TGG | + | chr7_3:56832120-56832139 | None:intergenic | 55.0% | |
! | CTCAGTCGGGTGTTATCCCT+TGG | + | chr7_3:56832805-56832824 | None:intergenic | 55.0% |
CAAGGGATAACACCCGACTG+AGG | - | chr7_3:56832803-56832822 | Msa1111150:intron | 55.0% | |
TTGTTCTGCTTGCATCCGGC+AGG | - | chr7_3:56832827-56832846 | Msa1111150:intron | 55.0% | |
! | ACAACCAGCAAAGTGCCTGC+CGG | + | chr7_3:56832845-56832864 | None:intergenic | 55.0% |
!! | CCCCCAGGTTTTGTGTTCCA+AGG | - | chr7_3:56833269-56833288 | Msa1111150:intron | 55.0% |
CCGCCTTGGAACACAAAACC+TGG | + | chr7_3:56833275-56833294 | None:intergenic | 55.0% | |
CAGATATGCTGTGAGGGCCA+AGG | - | chr7_3:56833439-56833458 | Msa1111150:CDS | 55.0% | |
AGCAGCTGACGACTGCTTGA+AGG | + | chr7_3:56833915-56833934 | None:intergenic | 55.0% | |
GGGACGAACCCCATACATGT+TGG | - | chr7_3:56834181-56834200 | Msa1111150:CDS | 55.0% | |
ACCCCATACATGTTGGCAGC+TGG | - | chr7_3:56834188-56834207 | Msa1111150:CDS | 55.0% | |
GCCAGCTGCCAACATGTATG+GGG | + | chr7_3:56834192-56834211 | None:intergenic | 55.0% | |
ACCACTTTCACAGCAGCCTG+TGG | - | chr7_3:56834739-56834758 | Msa1111150:CDS | 55.0% | |
GGGAAGTTACTAAGTCGCGG+AGG | - | chr7_3:56834893-56834912 | Msa1111150:intron | 55.0% | |
AGTTACTAAGTCGCGGAGGG+GGG | - | chr7_3:56834897-56834916 | Msa1111150:intron | 55.0% | |
CATCTGGCAACCTGTCTCTC+TGG | - | chr7_3:56834953-56834972 | Msa1111150:intron | 55.0% | |
AGGTGGGGGAAACTCAAAGG+AGG | - | chr7_3:56835901-56835920 | Msa1111150:intron | 55.0% | |
GGTGGGGGAAACTCAAAGGA+GGG | - | chr7_3:56835902-56835921 | Msa1111150:intron | 55.0% | |
GTGGGGGAAACTCAAAGGAG+GGG | - | chr7_3:56835903-56835922 | Msa1111150:intron | 55.0% | |
TAGCATCATTGTGGGACGGG+AGG | - | chr7_3:56836071-56836090 | Msa1111150:intron | 55.0% | |
TTGTGGGACGGGAGGTTTGA+TGG | - | chr7_3:56836079-56836098 | Msa1111150:intron | 55.0% | |
GGACGGGAGGTTTGATGGAA+TGG | - | chr7_3:56836084-56836103 | Msa1111150:intron | 55.0% | |
GTGCAAGAGGTGAAGGAGTC+TGG | - | chr7_3:56836142-56836161 | Msa1111150:intron | 55.0% | |
AGAGGTGAAGGAGTCTGGGT+TGG | - | chr7_3:56836147-56836166 | Msa1111150:intron | 55.0% | |
GCGTTTGAGGAGGAGGTTGT+TGG | - | chr7_3:56836424-56836443 | Msa1111150:intron | 55.0% | |
GCAATCGGCTGCGAAGGATA+TGG | - | chr7_3:56836477-56836496 | Msa1111150:intron | 55.0% | |
CAAGGGGCAATCCGCAGAAA+AGG | - | chr7_3:56836723-56836742 | Msa1111150:CDS | 55.0% | |
AATGGGAGGGGAGGGGGATT+AGG | + | chr7_3:56831335-56831354 | None:intergenic | 60.0% | |
TCACCCCATGATTTCCGGCC+AGG | - | chr7_3:56832112-56832131 | Msa1111150:CDS | 60.0% | |
GGAACACAAAACCTGGGGGC+AGG | + | chr7_3:56833268-56833287 | None:intergenic | 60.0% | |
TATGCTGTGAGGGCCAAGGC+TGG | - | chr7_3:56833443-56833462 | Msa1111150:CDS | 60.0% | |
TTGTCCGCAGGCCTACTCTC+AGG | - | chr7_3:56833994-56834013 | Msa1111150:CDS | 60.0% | |
TGTCCGCAGGCCTACTCTCA+GGG | - | chr7_3:56833995-56834014 | Msa1111150:CDS | 60.0% | |
CTTCCCTGAGAGTAGGCCTG+CGG | + | chr7_3:56834001-56834020 | None:intergenic | 60.0% | |
GCCACAGGCTGCTGTGAAAG+TGG | + | chr7_3:56834743-56834762 | None:intergenic | 60.0% | |
TGGCCAATGGCAGCGCTACA+GGG | - | chr7_3:56834836-56834855 | Msa1111150:intron | 60.0% | |
TAGCCCTGTAGCGCTGCCAT+TGG | + | chr7_3:56834842-56834861 | None:intergenic | 60.0% | |
! | AAGTCGCGGAGGGGGGATTT+TGG | - | chr7_3:56834904-56834923 | Msa1111150:intron | 60.0% |
! | AGTCGCGGAGGGGGGATTTT+GGG | - | chr7_3:56834905-56834924 | Msa1111150:intron | 60.0% |
TCCTAGCTGGGCTGAGCATC+TGG | - | chr7_3:56834937-56834956 | Msa1111150:intron | 60.0% | |
AGCGGCTGCATGCGGTTCTA+AGG | - | chr7_3:56835979-56835998 | Msa1111150:intron | 60.0% | |
!! | GGCTGCATGCGGTTCTAAGG+TGG | - | chr7_3:56835982-56836001 | Msa1111150:intron | 60.0% |
CAAGGGGCAATCCGCAGTGA+AGG | - | chr7_3:56836597-56836616 | Msa1111150:intron | 60.0% | |
CAAGGGGCAATCCGCAGTGA+AGG | - | chr7_3:56836597-56836616 | Msa1111150:intron | 60.0% | |
GGCTGACGCTATGAAGTCCG+TGG | - | chr7_3:56836855-56836874 | Msa1111150:five_prime_UTR | 60.0% | |
GCATCCGGCAGGCACTTTGC+TGG | - | chr7_3:56832838-56832857 | Msa1111150:intron | 65.0% | |
GTGGCCAATGGCAGCGCTAC+AGG | - | chr7_3:56834835-56834854 | Msa1111150:intron | 65.0% | |
GCCAGATGCTCAGCCCAGCT+AGG | + | chr7_3:56834941-56834960 | None:intergenic | 65.0% | |
CAAGGGGCAATCGGCTGCGA+AGG | - | chr7_3:56836471-56836490 | Msa1111150:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 56831314 | 56836897 | 56831314 | ID=Msa1111150;Name=Msa1111150 |
chr7_3 | mRNA | 56831314 | 56836897 | 56831314 | ID=Msa1111150-mRNA-1;Parent=Msa1111150;Name=Msa1111150-mRNA-1;_AED=0.20;_eAED=0.22;_QI=51|0.42|0.37|1|1|1|8|0|926 |
chr7_3 | exon | 56831314 | 56832452 | 56831314 | ID=Msa1111150-mRNA-1:exon:12053;Parent=Msa1111150-mRNA-1 |
chr7_3 | exon | 56832603 | 56832789 | 56832603 | ID=Msa1111150-mRNA-1:exon:12052;Parent=Msa1111150-mRNA-1 |
chr7_3 | exon | 56833350 | 56833484 | 56833350 | ID=Msa1111150-mRNA-1:exon:12051;Parent=Msa1111150-mRNA-1 |
chr7_3 | exon | 56833564 | 56833638 | 56833564 | ID=Msa1111150-mRNA-1:exon:12050;Parent=Msa1111150-mRNA-1 |
chr7_3 | exon | 56833877 | 56834368 | 56833877 | ID=Msa1111150-mRNA-1:exon:12049;Parent=Msa1111150-mRNA-1 |
chr7_3 | exon | 56834655 | 56834769 | 56834655 | ID=Msa1111150-mRNA-1:exon:12048;Parent=Msa1111150-mRNA-1 |
chr7_3 | exon | 56835303 | 56835691 | 56835303 | ID=Msa1111150-mRNA-1:exon:12047;Parent=Msa1111150-mRNA-1 |
chr7_3 | exon | 56836598 | 56836897 | 56836598 | ID=Msa1111150-mRNA-1:exon:12046;Parent=Msa1111150-mRNA-1 |
chr7_3 | five_prime_UTR | 56836847 | 56836897 | 56836847 | ID=Msa1111150-mRNA-1:five_prime_utr;Parent=Msa1111150-mRNA-1 |
chr7_3 | CDS | 56836598 | 56836846 | 56836598 | ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1 |
chr7_3 | CDS | 56835303 | 56835691 | 56835303 | ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1 |
chr7_3 | CDS | 56834655 | 56834769 | 56834655 | ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1 |
chr7_3 | CDS | 56833877 | 56834368 | 56833877 | ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1 |
chr7_3 | CDS | 56833564 | 56833638 | 56833564 | ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1 |
chr7_3 | CDS | 56833350 | 56833484 | 56833350 | ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1 |
chr7_3 | CDS | 56832603 | 56832789 | 56832603 | ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1 |
chr7_3 | CDS | 56831314 | 56832452 | 56831314 | ID=Msa1111150-mRNA-1:cds;Parent=Msa1111150-mRNA-1 |
Gene Sequence |
Protein sequence |