Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712610 | KEH27428.1 | 100.000 | 180 | 0 | 0 | 1 | 180 | 28 | 207 | 2.54e-126 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712610 | sp|Q9SW09|RS101_ARATH | 81.935 | 155 | 23 | 1 | 1 | 155 | 1 | 150 | 7.13e-79 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712610 | A0A072UEC5 | 100.000 | 180 | 0 | 0 | 1 | 180 | 28 | 207 | 1.22e-126 | 363 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0712610 | 0.862446 | 5.039510e-64 | -8.615850e-47 |
| Msa0002790 | Msa0712610 | 0.878136 | 3.583709e-69 | -8.615850e-47 |
| Msa0022970 | Msa0712610 | 0.811828 | 5.758161e-51 | -8.615850e-47 |
| Msa0027590 | Msa0712610 | 0.821380 | 4.163863e-53 | -8.615850e-47 |
| Msa0032780 | Msa0712610 | 0.826429 | 2.725901e-54 | -8.615850e-47 |
| Msa0032810 | Msa0712610 | 0.807695 | 4.458412e-50 | -8.615850e-47 |
| Msa0038980 | Msa0712610 | 0.805609 | 1.229356e-49 | -8.615850e-47 |
| Msa0045730 | Msa0712610 | 0.887867 | 9.783926e-73 | -8.615850e-47 |
| Msa0049690 | Msa0712610 | 0.814419 | 1.555581e-51 | -8.615850e-47 |
| Msa0075350 | Msa0712610 | 0.845965 | 2.922479e-59 | -8.615850e-47 |
| Msa0085780 | Msa0712610 | 0.802292 | 6.013136e-49 | -8.615850e-47 |
| Msa0097580 | Msa0712610 | 0.808117 | 3.626104e-50 | -8.615850e-47 |
| Msa0116130 | Msa0712610 | 0.872746 | 2.509927e-67 | -8.615850e-47 |
| Msa0116670 | Msa0712610 | 0.860657 | 1.772288e-63 | -8.615850e-47 |
| Msa0118710 | Msa0712610 | 0.804910 | 1.721645e-49 | -8.615850e-47 |
| Msa0604960 | Msa0712610 | 0.893708 | 4.886267e-75 | -8.615850e-47 |
| Msa0615580 | Msa0712610 | 0.800628 | 1.318278e-48 | -8.615850e-47 |
| Msa0617540 | Msa0712610 | 0.865712 | 4.841216e-65 | -8.615850e-47 |
| Msa0622750 | Msa0712610 | 0.886193 | 4.231859e-72 | -8.615850e-47 |
| Msa0623200 | Msa0712610 | 0.884559 | 1.728574e-71 | -8.615850e-47 |
| Msa0625570 | Msa0712610 | 0.812550 | 4.007190e-51 | -8.615850e-47 |
| Msa0643820 | Msa0712610 | 0.817599 | 3.033088e-52 | -8.615850e-47 |
| Msa0656410 | Msa0712610 | 0.819238 | 1.289922e-52 | -8.615850e-47 |
| Msa0659030 | Msa0712610 | 0.800151 | 1.648994e-48 | -8.615850e-47 |
| Msa0666230 | Msa0712610 | 0.814184 | 1.753604e-51 | -8.615850e-47 |
| Msa0683660 | Msa0712610 | 0.835823 | 1.340528e-56 | -8.615850e-47 |
| Msa0698780 | Msa0712610 | 0.801520 | 8.663608e-49 | -8.615850e-47 |
| Msa0705000 | Msa0712610 | 0.808680 | 2.750113e-50 | -8.615850e-47 |
| Msa0705040 | Msa0712610 | 0.812231 | 4.703714e-51 | -8.615850e-47 |
| Msa0705800 | Msa0712610 | 0.918363 | 1.708646e-86 | -8.615850e-47 |
| Msa0706500 | Msa0712610 | 0.811158 | 8.051102e-51 | -8.615850e-47 |
| Msa0709280 | Msa0712610 | 0.803547 | 3.309024e-49 | -8.615850e-47 |
| Msa0712610 | Msa0717380 | 0.804943 | 1.694723e-49 | -8.615850e-47 |
| Msa0712610 | Msa0729200 | 0.901941 | 1.608610e-78 | -8.615850e-47 |
| Msa0712610 | Msa0752910 | 0.919155 | 6.403819e-87 | -8.615850e-47 |
| Msa0712610 | Msa0766080 | 0.829560 | 4.807289e-55 | -8.615850e-47 |
| Msa0712610 | Msa0769590 | 0.895752 | 7.107211e-76 | -8.615850e-47 |
| Msa0712610 | Msa0781080 | 0.903514 | 3.205830e-79 | -8.615850e-47 |
| Msa0712610 | Msa0783630 | 0.804996 | 1.652110e-49 | -8.615850e-47 |
| Msa0712610 | Msa0785130 | 0.853695 | 2.015722e-61 | -8.615850e-47 |
| Msa0712610 | Msa0786660 | 0.826010 | 3.430108e-54 | -8.615850e-47 |
| Msa0712610 | Msa0788380 | 0.838415 | 2.914466e-57 | -8.615850e-47 |
| Msa0712610 | Msa0792420 | 0.902000 | 1.514627e-78 | -8.615850e-47 |
| Msa0712610 | Msa0806880 | 0.881330 | 2.625078e-70 | -8.615850e-47 |
| Msa0712610 | Msa0817540 | 0.833186 | 6.162048e-56 | -8.615850e-47 |
| Msa0712610 | Msa0822580 | 0.870382 | 1.522581e-66 | -8.615850e-47 |
| Msa0712610 | Msa0827380 | 0.865373 | 6.190730e-65 | -8.615850e-47 |
| Msa0712610 | Msa0844220 | -0.814034 | 1.892382e-51 | -8.615850e-47 |
| Msa0712610 | Msa0861320 | 0.812297 | 4.551415e-51 | -8.615850e-47 |
| Msa0712610 | Msa0876170 | 0.870237 | 1.698428e-66 | -8.615850e-47 |
| Msa0712610 | Msa0888810 | 0.861629 | 8.973247e-64 | -8.615850e-47 |
| Msa0712610 | Msa0915540 | 0.855151 | 7.646061e-62 | -8.615850e-47 |
| Msa0712610 | Msa0945480 | 0.921551 | 3.094503e-88 | -8.615850e-47 |
| Msa0712610 | Msa1010310 | 0.815940 | 7.143806e-52 | -8.615850e-47 |
| Msa0712610 | Msa1019240 | 0.830099 | 3.553084e-55 | -8.615850e-47 |
| Msa0712610 | Msa1019260 | 0.822214 | 2.670408e-53 | -8.615850e-47 |
| Msa0712610 | Msa1021120 | 0.872804 | 2.400368e-67 | -8.615850e-47 |
| Msa0712610 | Msa1037290 | 0.895591 | 8.286327e-76 | -8.615850e-47 |
| Msa0712610 | Msa1039520 | 0.832287 | 1.030330e-55 | -8.615850e-47 |
| Msa0712610 | Msa1040160 | 0.829514 | 4.934337e-55 | -8.615850e-47 |
| Msa0712610 | Msa1041680 | 0.802822 | 4.674888e-49 | -8.615850e-47 |
| Msa0712610 | Msa1042100 | 0.800248 | 1.575760e-48 | -8.615850e-47 |
| Msa0712610 | Msa1042780 | 0.817566 | 3.085677e-52 | -8.615850e-47 |
| Msa0712610 | Msa1048690 | 0.835123 | 2.014986e-56 | -8.615850e-47 |
| Msa0712610 | Msa1058700 | 0.821632 | 3.641824e-53 | -8.615850e-47 |
| Msa0712610 | Msa1072710 | 0.824075 | 9.821903e-54 | -8.615850e-47 |
| Msa0712610 | Msa1078870 | 0.833680 | 4.640756e-56 | -8.615850e-47 |
| Msa0712610 | Msa1078980 | 0.805175 | 1.515727e-49 | -8.615850e-47 |
| Msa0712610 | Msa1080350 | 0.935177 | 1.277469e-96 | -8.615850e-47 |
| Msa0712610 | Msa1082170 | 0.882776 | 7.842658e-71 | -8.615850e-47 |
| Msa0712610 | Msa1083370 | 0.813163 | 2.940965e-51 | -8.615850e-47 |
| Msa0712610 | Msa1085470 | 0.825930 | 3.582994e-54 | -8.615850e-47 |
| Msa0712610 | Msa1088490 | 0.881305 | 2.680539e-70 | -8.615850e-47 |
| Msa0712610 | Msa1094380 | 0.807166 | 5.772668e-50 | -8.615850e-47 |
| Msa0712610 | Msa1096900 | 0.836250 | 1.044395e-56 | -8.615850e-47 |
| Msa0712610 | Msa1104210 | 0.819491 | 1.129608e-52 | -8.615850e-47 |
| Msa0712610 | Msa1125500 | 0.850811 | 1.334069e-60 | -8.615850e-47 |
| Msa0712610 | Msa1125580 | 0.855210 | 7.348926e-62 | -8.615850e-47 |
| Msa0712610 | Msa1125860 | 0.932174 | 1.263753e-94 | -8.615850e-47 |
| Msa0712610 | Msa1126060 | 0.927975 | 5.540789e-92 | -8.615850e-47 |
| Msa0712610 | Msa1126470 | 0.825139 | 5.516767e-54 | -8.615850e-47 |
| Msa0712610 | Msa1126520 | 0.939627 | 9.251873e-100 | -8.615850e-47 |
| Msa0712610 | Msa1159090 | -0.818258 | 2.153219e-52 | -8.615850e-47 |
| Msa0712610 | Msa1164150 | 0.875305 | 3.421758e-68 | -8.615850e-47 |
| Msa0712610 | Msa1166570 | 0.811371 | 7.238937e-51 | -8.615850e-47 |
| Msa0712610 | Msa1166860 | 0.801083 | 1.064549e-48 | -8.615850e-47 |
| Msa0712610 | Msa1166870 | 0.844310 | 8.185737e-59 | -8.615850e-47 |
| Msa0712610 | Msa1167540 | 0.854764 | 9.901235e-62 | -8.615850e-47 |
| Msa0712610 | Msa1167550 | 0.843907 | 1.049870e-58 | -8.615850e-47 |
| Msa0712610 | Msa1183450 | 0.800099 | 1.689349e-48 | -8.615850e-47 |
| Msa0712610 | Msa1186030 | 0.860992 | 1.402196e-63 | -8.615850e-47 |
| Msa0712610 | Msa1186980 | 0.818175 | 2.248531e-52 | -8.615850e-47 |
| Msa0712610 | Msa1193690 | 0.801449 | 8.956792e-49 | -8.615850e-47 |
| Msa0712610 | Msa1208020 | 0.807954 | 3.927381e-50 | -8.615850e-47 |
| Msa0712610 | Msa1215820 | 0.861733 | 8.335126e-64 | -8.615850e-47 |
| Msa0712610 | Msa1218170 | 0.838427 | 2.894912e-57 | -8.615850e-47 |
| Msa0712610 | Msa1240270 | 0.867052 | 1.818426e-65 | -8.615850e-47 |
| Msa0712610 | Msa1241190 | 0.823152 | 1.615327e-53 | -8.615850e-47 |
| Msa0712610 | Msa1256840 | 0.884787 | 1.422183e-71 | -8.615850e-47 |
| Msa0712610 | Msa1260530 | 0.800615 | 1.326469e-48 | -8.615850e-47 |
| Msa0712610 | Msa1273340 | 0.807654 | 4.547165e-50 | -8.615850e-47 |
| Msa0712610 | Msa1295150 | 0.848176 | 7.240343e-60 | -8.615850e-47 |
| Msa0712610 | Msa1295170 | 0.809753 | 1.619375e-50 | -8.615850e-47 |
| Msa0712610 | Msa1305050 | 0.812982 | 3.223050e-51 | -8.615850e-47 |
| Msa0712610 | Msa1311400 | 0.864673 | 1.026938e-64 | -8.615850e-47 |
| Msa0712610 | Msa1316680 | 0.827862 | 1.237530e-54 | -8.615850e-47 |
| Msa0712610 | Msa1321790 | 0.865738 | 4.749038e-65 | -8.615850e-47 |
| Msa0712610 | Msa1331710 | 0.809401 | 1.927223e-50 | -8.615850e-47 |
| Msa0712610 | Msa1332250 | 0.848679 | 5.256748e-60 | -8.615850e-47 |
| Msa0712610 | Msa1338190 | 0.853938 | 1.715782e-61 | -8.615850e-47 |
| Msa0712610 | Msa1349570 | 0.891096 | 5.424756e-74 | -8.615850e-47 |
| Msa0712610 | Msa1352140 | 0.824297 | 8.712211e-54 | -8.615850e-47 |
| Msa0712610 | Msa1356790 | 0.991620 | 1.269249e-188 | -8.615850e-47 |
| Msa0712610 | Msa1362790 | 0.905677 | 3.334505e-80 | -8.615850e-47 |
| Msa0712610 | Msa1363330 | 0.822418 | 2.394496e-53 | -8.615850e-47 |
| Msa0712610 | Msa1366180 | 0.853132 | 2.924130e-61 | -8.615850e-47 |
| Msa0712610 | Msa1368920 | 0.894279 | 2.864259e-75 | -8.615850e-47 |
| Msa0712610 | Msa1369190 | 0.903752 | 2.505473e-79 | -8.615850e-47 |
| Msa0712610 | Msa1374240 | 0.894999 | 1.452804e-75 | -8.615850e-47 |
| Msa0712610 | Msa1386600 | 0.821696 | 3.519403e-53 | -8.615850e-47 |
| Msa0712610 | Msa1387410 | 0.829525 | 4.903131e-55 | -8.615850e-47 |
| Msa0712610 | Msa1392590 | 0.891663 | 3.234721e-74 | -8.615850e-47 |
| Msa0712610 | Msa1397100 | 0.851638 | 7.787842e-61 | -8.615850e-47 |
| Msa0712610 | Msa1403910 | 0.878117 | 3.638748e-69 | -8.615850e-47 |
| Msa0712610 | Msa1406080 | 0.869532 | 2.886533e-66 | -8.615850e-47 |
| Msa0712610 | Msa1407070 | 0.832579 | 8.721293e-56 | -8.615850e-47 |
| Msa0712610 | Msa1413260 | 0.808904 | 2.462740e-50 | -8.615850e-47 |
| Msa0712610 | Msa1413500 | 0.883573 | 4.001209e-71 | -8.615850e-47 |
| Msa0712610 | Msa1418770 | 0.829463 | 5.075421e-55 | -8.615850e-47 |
| Msa0712610 | Msa1425670 | 0.825753 | 3.947416e-54 | -8.615850e-47 |
| Msa0712610 | Msa1426120 | 0.837574 | 4.796550e-57 | -8.615850e-47 |
| Msa0712610 | Msa1426370 | 0.865218 | 6.925857e-65 | -8.615850e-47 |
| Msa0712610 | Msa1426490 | 0.899998 | 1.136700e-77 | -8.615850e-47 |
| Msa0712610 | Msa1427560 | 0.828345 | 9.467684e-55 | -8.615850e-47 |
| Msa0712610 | Msa1428810 | 0.800609 | 1.330024e-48 | -8.615850e-47 |
| Msa0712610 | Msa1433310 | 0.807471 | 4.974765e-50 | -8.615850e-47 |
| Msa0712610 | Msa1437280 | 0.823205 | 1.570052e-53 | -8.615850e-47 |
| Msa0712610 | Msa1450280 | 0.831336 | 1.768421e-55 | -8.615850e-47 |
| Msa0712610 | Msa1455950 | 0.857139 | 2.000700e-62 | -8.615850e-47 |
| Msa0712610 | Msa1456050 | 0.872339 | 3.431612e-67 | -8.615850e-47 |
| Msa0712610 | Msa1462860 | 0.863809 | 1.910069e-64 | -8.615850e-47 |
| Msa0123010 | Msa0712610 | 0.844476 | 7.384340e-59 | -8.615850e-47 |
| Msa0128750 | Msa0712610 | 0.806434 | 8.241575e-50 | -8.615850e-47 |
| Msa0133540 | Msa0712610 | 0.869617 | 2.706947e-66 | -8.615850e-47 |
| Msa0138890 | Msa0712610 | 0.854293 | 1.355189e-61 | -8.615850e-47 |
| Msa0146340 | Msa0712610 | 0.827438 | 1.564423e-54 | -8.615850e-47 |
| Msa0167480 | Msa0712610 | 0.801158 | 1.027336e-48 | -8.615850e-47 |
| Msa0173530 | Msa0712610 | 0.856181 | 3.825988e-62 | -8.615850e-47 |
| Msa0181490 | Msa0712610 | 0.874635 | 5.789701e-68 | -8.615850e-47 |
| Msa0191450 | Msa0712610 | 0.844696 | 6.441370e-59 | -8.615850e-47 |
| Msa0191550 | Msa0712610 | 0.815884 | 7.354878e-52 | -8.615850e-47 |
| Msa0192750 | Msa0712610 | 0.860243 | 2.365845e-63 | -8.615850e-47 |
| Msa0194940 | Msa0712610 | 0.812366 | 4.395630e-51 | -8.615850e-47 |
| Msa0197980 | Msa0712610 | 0.822618 | 2.150842e-53 | -8.615850e-47 |
| Msa0210330 | Msa0712610 | 0.834205 | 3.429626e-56 | -8.615850e-47 |
| Msa0210360 | Msa0712610 | 0.880146 | 6.977336e-70 | -8.615850e-47 |
| Msa0218830 | Msa0712610 | 0.854084 | 1.557211e-61 | -8.615850e-47 |
| Msa0219120 | Msa0712610 | 0.871318 | 7.490650e-67 | -8.615850e-47 |
| Msa0221030 | Msa0712610 | 0.870928 | 1.006766e-66 | -8.615850e-47 |
| Msa0222730 | Msa0712610 | 0.820241 | 7.608878e-53 | -8.615850e-47 |
| Msa0224560 | Msa0712610 | 0.865248 | 6.775942e-65 | -8.615850e-47 |
| Msa0229150 | Msa0712610 | 0.856295 | 3.544188e-62 | -8.615850e-47 |
| Msa0230490 | Msa0712610 | 0.827580 | 1.446130e-54 | -8.615850e-47 |
| Msa0369410 | Msa0712610 | 0.810473 | 1.132689e-50 | -8.615850e-47 |
| Msa0376830 | Msa0712610 | 0.810409 | 1.169442e-50 | -8.615850e-47 |
| Msa0443390 | Msa0712610 | 0.846414 | 2.204584e-59 | -8.615850e-47 |
| Msa0463520 | Msa0712610 | 0.828471 | 8.827738e-55 | -8.615850e-47 |
| Msa0471880 | Msa0712610 | 0.845826 | 3.187091e-59 | -8.615850e-47 |
| Msa0481520 | Msa0712610 | 0.851534 | 8.337084e-61 | -8.615850e-47 |
| Msa0481850 | Msa0712610 | 0.940152 | 3.801131e-100 | -8.615850e-47 |
| Msa0244780 | Msa0712610 | 0.806981 | 6.316643e-50 | -8.615850e-47 |
| Msa0257450 | Msa0712610 | 0.849277 | 3.585344e-60 | -8.615850e-47 |
| Msa0258850 | Msa0712610 | 0.854232 | 1.411962e-61 | -8.615850e-47 |
| Msa0269180 | Msa0712610 | 0.834181 | 3.476589e-56 | -8.615850e-47 |
| Msa0289580 | Msa0712610 | 0.816211 | 6.215136e-52 | -8.615850e-47 |
| Msa0289610 | Msa0712610 | 0.825487 | 4.563586e-54 | -8.615850e-47 |
| Msa0297830 | Msa0712610 | 0.864078 | 1.574618e-64 | -8.615850e-47 |
| Msa0298200 | Msa0712610 | 0.855761 | 5.079293e-62 | -8.615850e-47 |
| Msa0298870 | Msa0712610 | 0.837336 | 5.519797e-57 | -8.615850e-47 |
| Msa0300350 | Msa0712610 | 0.812773 | 3.581522e-51 | -8.615850e-47 |
| Msa0301220 | Msa0712610 | 0.820139 | 8.029528e-53 | -8.615850e-47 |
| Msa0306690 | Msa0712610 | 0.875916 | 2.112854e-68 | -8.615850e-47 |
| Msa0327300 | Msa0712610 | 0.829146 | 6.060557e-55 | -8.615850e-47 |
| Msa0327330 | Msa0712610 | 0.835512 | 1.606864e-56 | -8.615850e-47 |
| Msa0333910 | Msa0712610 | 0.815080 | 1.110187e-51 | -8.615850e-47 |
| Msa0334030 | Msa0712610 | 0.817444 | 3.286941e-52 | -8.615850e-47 |
| Msa0335840 | Msa0712610 | 0.869203 | 3.692055e-66 | -8.615850e-47 |
| Msa0336010 | Msa0712610 | 0.803721 | 3.045008e-49 | -8.615850e-47 |
| Msa0337670 | Msa0712610 | 0.879692 | 1.012843e-69 | -8.615850e-47 |
| Msa0348830 | Msa0712610 | 0.876947 | 9.306218e-69 | -8.615850e-47 |
| Msa0483110 | Msa0712610 | 0.890201 | 1.220783e-73 | -8.615850e-47 |
| Msa0526540 | Msa0712610 | 0.826500 | 2.622413e-54 | -8.615850e-47 |
| Msa0527150 | Msa0712610 | 0.802465 | 5.537819e-49 | -8.615850e-47 |
| Msa0534750 | Msa0712610 | 0.828847 | 7.158507e-55 | -8.615850e-47 |
| Msa0546030 | Msa0712610 | 0.852929 | 3.342134e-61 | -8.615850e-47 |
| Msa0550420 | Msa0712610 | 0.815995 | 6.947713e-52 | -8.615850e-47 |
| Msa0573350 | Msa0712610 | 0.835012 | 2.148909e-56 | -8.615850e-47 |
| Msa0573500 | Msa0712610 | 0.804083 | 2.561404e-49 | -8.615850e-47 |
| Msa0576940 | Msa0712610 | 0.835272 | 1.848275e-56 | -8.615850e-47 |
| Msa0584030 | Msa0712610 | 0.871499 | 6.524323e-67 | -8.615850e-47 |
| Msa0588630 | Msa0712610 | -0.827279 | 1.707625e-54 | -8.615850e-47 |
| Msa0590940 | Msa0712610 | 0.830602 | 2.677874e-55 | -8.615850e-47 |
| Msa0596370 | Msa0712610 | 0.828189 | 1.032520e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712610 | MtrunA17_Chr5g0397241 | 100.000 | 180 | 0 | 0 | 1 | 180 | 1 | 180 | 2.55e-130 | 362 |
| Msa0712610 | MtrunA17_Chr8g0387411 | 93.889 | 180 | 8 | 1 | 1 | 180 | 1 | 177 | 2.16e-120 | 337 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0712610 | AT4G25740.1 | 81.935 | 155 | 23 | 1 | 1 | 155 | 1 | 150 | 7.25e-80 | 235 |
| Msa0712610 | AT5G52650.1 | 80.000 | 155 | 30 | 1 | 1 | 155 | 1 | 154 | 1.81e-73 | 219 |
| Msa0712610 | AT5G41520.1 | 75.974 | 154 | 32 | 5 | 1 | 153 | 1 | 150 | 2.25e-70 | 211 |
| Msa0712610 | AT4G25740.2 | 63.277 | 177 | 32 | 1 | 1 | 177 | 1 | 144 | 6.04e-60 | 184 |
| Msa0712610 | AT5G41520.2 | 75.926 | 108 | 22 | 4 | 46 | 153 | 1 | 104 | 5.95e-43 | 140 |
Find 86 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGATAGTTCTTGATTT+TGG | 0.149376 | 5_1:+4470096 | Msa0712610:three_prime_UTR |
| TGCTTCAGCTCATGCAGTTT+TGG | 0.202034 | 5_1:+4469889 | Msa0712610:three_prime_UTR |
| AGAGGACCTGCTGGTGAATT+TGG | 0.215916 | 5_1:+4468266 | Msa0712610:CDS |
| AGATTTGGCACATCGATTTC+TGG | 0.226768 | 5_1:-4467877 | None:intergenic |
| AGCTTAATCACTTGCAGATT+TGG | 0.235590 | 5_1:-4467892 | None:intergenic |
| TGCAAAGAAGGATTTCAATT+TGG | 0.241273 | 5_1:+4467846 | Msa0712610:CDS |
| TTGCTTGGATGAACTATTAC+TGG | 0.272334 | 5_1:+4467956 | Msa0712610:CDS |
| ACCTAAAATCATTTCTGAAT+TGG | 0.279873 | 5_1:+4470178 | Msa0712610:three_prime_UTR |
| GCTGACTACAGGCCTTCTTT+TGG | 0.293788 | 5_1:+4468311 | Msa0712610:CDS |
| CCTGGCTTCGGTCGTGGTTC+TGG | 0.294525 | 5_1:+4469816 | Msa0712610:CDS |
| TTTGATGGAGAAAGGAGATT+TGG | 0.304890 | 5_1:+4468212 | Msa0712610:CDS |
| GGTCGTGGTTCTGGTGGCTT+TGG | 0.306704 | 5_1:+4469825 | Msa0712610:CDS |
| CTCCTTTCTCCATCAAATCT+TGG | 0.337377 | 5_1:-4468206 | None:intergenic |
| AAGCCAGCTGGAAGGCCCTT+TGG | 0.353720 | 5_1:+4468066 | Msa0712610:CDS |
| TGATGCAGAGCTTCAAATCT+AGG | 0.370024 | 5_1:+4467914 | Msa0712610:CDS |
| TACTGGTTCCTTACCAATGA+TGG | 0.373159 | 5_1:+4467973 | Msa0712610:CDS |
| AGGCCCTTTGGTGGTCCTCC+TGG | 0.384336 | 5_1:+4468078 | Msa0712610:CDS |
| CAGGGCCCTGGTGGTAGACC+TGG | 0.396705 | 5_1:+4469798 | Msa0712610:intron |
| GATTTGGCACATCGATTTCT+GGG | 0.410537 | 5_1:-4467876 | None:intergenic |
| TAAGCATCGTTTGAACTAGT+TGG | 0.424537 | 5_1:-4469852 | None:intergenic |
| GAGAAACTCAATTCCATCAT+TGG | 0.425707 | 5_1:-4467986 | None:intergenic |
| CTGCCTCTACATTGCAATCA+TGG | 0.430480 | 5_1:+4467578 | Msa0712610:exon |
| CCACCAAAGGGCCTTCCAGC+TGG | 0.433378 | 5_1:-4468069 | None:intergenic |
| ATGATGGAATTGAGTTTCTC+AGG | 0.441503 | 5_1:+4467989 | Msa0712610:CDS |
| AATTCACCAGCAGGTCCTCT+TGG | 0.445100 | 5_1:-4468263 | None:intergenic |
| TCCTGCTACTTTGAAGAAGC+AGG | 0.450643 | 5_1:+4468041 | Msa0712610:CDS |
| GCCTGCTTCTTCAAAGTAGC+AGG | 0.453311 | 5_1:-4468042 | None:intergenic |
| ATTCACCAGCAGGTCCTCTT+GGG | 0.458492 | 5_1:-4468262 | None:intergenic |
| CTGACTCTATTGCAGGGCCC+TGG | 0.459984 | 5_1:+4469786 | Msa0712610:intron |
| AGGGGCCCACCAAGATTTGA+TGG | 0.462295 | 5_1:+4468197 | Msa0712610:intron |
| GGGAGTTTGCTATGCAAAGA+AGG | 0.473090 | 5_1:+4467834 | Msa0712610:CDS |
| CTTTCTCCATCAAATCTTGG+TGG | 0.474542 | 5_1:-4468203 | None:intergenic |
| AAGAAGCAGGCTAAGCCAGC+TGG | 0.479610 | 5_1:+4468054 | Msa0712610:CDS |
| GGTAGACCTGGCTTCGGTCG+TGG | 0.484946 | 5_1:+4469810 | Msa0712610:CDS |
| GATGGAGAAAGGAGATTTGG+TGG | 0.486392 | 5_1:+4468215 | Msa0712610:CDS |
| GGCTTCGGTCGTGGTTCTGG+TGG | 0.490892 | 5_1:+4469819 | Msa0712610:CDS |
| CAGGTCCTCTTGGGCCTCCA+CGG | 0.492606 | 5_1:-4468253 | None:intergenic |
| GACGATAGATCAAGGACTGT+TGG | 0.492741 | 5_1:+4470059 | Msa0712610:three_prime_UTR |
| CACCAAGATTTGATGGAGAA+AGG | 0.498036 | 5_1:+4468204 | Msa0712610:CDS |
| TTTCTCCATCAAATCTTGGT+GGG | 0.498924 | 5_1:-4468202 | None:intergenic |
| ATCACCAGGAGGACCACCAA+AGG | 0.501155 | 5_1:-4468082 | None:intergenic |
| CCAGCTGGAAGGCCCTTTGG+TGG | 0.502902 | 5_1:+4468069 | Msa0712610:CDS |
| GTGGAGCTCCAGCTGACTAC+AGG | 0.506847 | 5_1:+4468300 | Msa0712610:CDS |
| AAGATTATTACCCCAAAAGA+AGG | 0.511567 | 5_1:-4468323 | None:intergenic |
| CCTGGTGGTAGACCTGGCTT+CGG | 0.513224 | 5_1:+4469804 | Msa0712610:CDS |
| TCTCCTCCAAATTCACCAGC+AGG | 0.516678 | 5_1:-4468272 | None:intergenic |
| AAAGAAGGCCTGTAGTCAGC+TGG | 0.516901 | 5_1:-4468308 | None:intergenic |
| TCAAACAACTTGTAGTGGAG+GGG | 0.518188 | 5_1:-4469937 | None:intergenic |
| GTCCTCCTGGTGATCGCCCT+AGG | 0.527814 | 5_1:+4468091 | Msa0712610:CDS |
| GGACCTGCTGGTGAATTTGG+AGG | 0.530997 | 5_1:+4468269 | Msa0712610:CDS |
| CTACAAGTTGTTTGATCCAT+CGG | 0.533537 | 5_1:+4469945 | Msa0712610:three_prime_UTR |
| CCAGAACCACGACCGAAGCC+AGG | 0.533716 | 5_1:-4469816 | None:intergenic |
| CCGAAGCCAGGTCTACCACC+AGG | 0.539431 | 5_1:-4469804 | None:intergenic |
| AATGTTTGGACGATAGATCA+AGG | 0.541184 | 5_1:+4470051 | Msa0712610:three_prime_UTR |
| ACTCAATTCCATCATTGGTA+AGG | 0.545851 | 5_1:-4467981 | None:intergenic |
| GGAGGCCCAAGAGGACCTGC+TGG | 0.551228 | 5_1:+4468257 | Msa0712610:CDS |
| GGTATTTGCAGATCTCTCTA+CGG | 0.553257 | 5_1:-4467713 | None:intergenic |
| TTTAGAAGATTGCAGCGCGA+AGG | 0.554374 | 5_1:+4467512 | Msa0712610:five_prime_UTR |
| CACAAGACATACCTTGGAAG+AGG | 0.559210 | 5_1:-4467734 | None:intergenic |
| TTAGAAGATTGCAGCGCGAA+GGG | 0.562488 | 5_1:+4467513 | Msa0712610:five_prime_UTR |
| GTAGCAGGAACAATCTCAGA+TGG | 0.565512 | 5_1:-4468027 | None:intergenic |
| TCACCAGGAGGACCACCAAA+GGG | 0.567521 | 5_1:-4468081 | None:intergenic |
| ACTCTATTGCAGGGCCCTGG+TGG | 0.567801 | 5_1:+4469789 | Msa0712610:intron |
| ATCAAACAACTTGTAGTGGA+GGG | 0.574464 | 5_1:-4469938 | None:intergenic |
| AGCAGGCTAAGCCAGCTGGA+AGG | 0.574627 | 5_1:+4468058 | Msa0712610:CDS |
| TATTAAAATAAAATGTCCGA+TGG | 0.576095 | 5_1:-4469961 | None:intergenic |
| ATGGATCAAACAACTTGTAG+TGG | 0.585969 | 5_1:-4469942 | None:intergenic |
| AATTACCTAGGGCGATCACC+AGG | 0.586300 | 5_1:-4468096 | None:intergenic |
| GGCCTCCACGGTATCCATCA+CGG | 0.588978 | 5_1:-4468241 | None:intergenic |
| ATCTGCAAATACCTCTTCCA+AGG | 0.590451 | 5_1:+4467723 | Msa0712610:CDS |
| GATGCAGAGCTTCAAATCTA+GGG | 0.604467 | 5_1:+4467915 | Msa0712610:CDS |
| CAAACAACTTGTAGTGGAGG+GGG | 0.604922 | 5_1:-4469936 | None:intergenic |
| GATCAAACAACTTGTAGTGG+AGG | 0.605834 | 5_1:-4469939 | None:intergenic |
| TCAAATCTAGGGAATATGTG+AGG | 0.607518 | 5_1:+4467926 | Msa0712610:CDS |
| CAAATCTAGGGAATATGTGA+GGG | 0.609242 | 5_1:+4467927 | Msa0712610:CDS |
| ATACCATGATTGCAATGTAG+AGG | 0.611113 | 5_1:-4467581 | None:intergenic |
| GCAGCGCGAAGGGATTAGAA+AGG | 0.617881 | 5_1:+4467523 | Msa0712610:five_prime_UTR |
| GGATACCGTGGAGGCCCAAG+AGG | 0.629598 | 5_1:+4468248 | Msa0712610:CDS |
| AGATTTGGTGGTGACCGTGA+TGG | 0.637340 | 5_1:+4468227 | Msa0712610:CDS |
| CAGCACAGCAGAAACTTCAG+CGG | 0.645527 | 5_1:-4467558 | None:intergenic |
| GGTGAATTTGGAGGAGACAA+AGG | 0.655884 | 5_1:+4468278 | Msa0712610:CDS |
| GAATTTGGAGGAGACAAAGG+TGG | 0.658883 | 5_1:+4468281 | Msa0712610:CDS |
| CGAAGCCAGGTCTACCACCA+GGG | 0.679017 | 5_1:-4469803 | None:intergenic |
| GACCGTGATGGATACCGTGG+AGG | 0.697879 | 5_1:+4468239 | Msa0712610:CDS |
| GGTGACCGTGATGGATACCG+TGG | 0.715974 | 5_1:+4468236 | Msa0712610:CDS |
| TACCTAGGGCGATCACCAGG+AGG | 0.726307 | 5_1:-4468093 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAAAAATGAATAAAAT+TGG | - | chr5_1:4467665-4467684 | None:intergenic | 10.0% |
| !!! | TTTTTTTATGTTTTGTTATT+TGG | + | chr5_1:4468145-4468164 | Msa0712610:intron | 10.0% |
| !! | AAATAAATATAAAAATTGAG+TGG | + | chr5_1:4469374-4469393 | Msa0712610:intron | 10.0% |
| !! | AATAAATATAAAAATTGAGT+GGG | + | chr5_1:4469375-4469394 | Msa0712610:intron | 10.0% |
| !!! | TTCTAAAATACATATAAACT+TGG | + | chr5_1:4468670-4468689 | Msa0712610:intron | 15.0% |
| !!! | TCTAAAATACATATAAACTT+GGG | + | chr5_1:4468671-4468690 | Msa0712610:intron | 15.0% |
| !! | TTATATATATATTGAGCAAA+GGG | - | chr5_1:4468710-4468729 | None:intergenic | 15.0% |
| !! | AATTCCAAATTAATTACCTA+GGG | - | chr5_1:4468110-4468129 | None:intergenic | 20.0% |
| !!! | TTTATGTTTTGTTATTTGGT+CGG | + | chr5_1:4468149-4468168 | Msa0712610:intron | 20.0% |
| !! | TCAAATCAAAGATAATATTG+AGG | - | chr5_1:4468492-4468511 | None:intergenic | 20.0% |
| !! | CTTATATATATATTGAGCAA+AGG | - | chr5_1:4468711-4468730 | None:intergenic | 20.0% |
| !!! | TTTAACTAGTTTAATAGAGT+TGG | + | chr5_1:4468866-4468885 | Msa0712610:intron | 20.0% |
| !!! | GATTTAGCTTTTGAAATATA+AGG | + | chr5_1:4469473-4469492 | Msa0712610:intron | 20.0% |
| !! | TATTAAAATAAAATGTCCGA+TGG | - | chr5_1:4469964-4469983 | None:intergenic | 20.0% |
| !!! | ATGATGATTTTGTTAATGTT+TGG | + | chr5_1:4470037-4470056 | Msa0712610:three_prime_UTR | 20.0% |
| !!! | AGAAATGATTTTAGGTTATT+GGG | - | chr5_1:4470174-4470193 | None:intergenic | 20.0% |
| ! | TTATTGTGTTGTGTTTGAAT+TGG | + | chr5_1:4467788-4467807 | Msa0712610:intron | 25.0% |
| !!! | AAACTGTTGTTATTTTTCAG+AGG | + | chr5_1:4467813-4467832 | Msa0712610:intron | 25.0% |
| !!! | AACTGTTGTTATTTTTCAGA+GGG | + | chr5_1:4467814-4467833 | Msa0712610:intron | 25.0% |
| ! | CAATTCCAAATTAATTACCT+AGG | - | chr5_1:4468111-4468130 | None:intergenic | 25.0% |
| !!! | TTTTGGGGTAATAATCTTAT+TGG | + | chr5_1:4468328-4468347 | Msa0712610:intron | 25.0% |
| !!! | ATGTTGTGTTTGTTATGATT+TGG | + | chr5_1:4468379-4468398 | Msa0712610:intron | 25.0% |
| !!! | TTTTGTTATGGTGTTTTATG+CGG | + | chr5_1:4468441-4468460 | Msa0712610:intron | 25.0% |
| ! | ATTTGTTCAGAAAAAGAAAC+AGG | + | chr5_1:4469061-4469080 | Msa0712610:intron | 25.0% |
| ! | CCAATAGAATTATATACATG+AGG | - | chr5_1:4469738-4469757 | None:intergenic | 25.0% |
| ! | CCTCATGTATATAATTCTAT+TGG | + | chr5_1:4469735-4469754 | Msa0712610:intron | 25.0% |
| !! | ATGTAATGAGAATTTTGAAC+CGG | + | chr5_1:4469995-4470014 | Msa0712610:three_prime_UTR | 25.0% |
| !!! | CAATTGATAGTTCTTGATTT+TGG | + | chr5_1:4470096-4470115 | Msa0712610:three_prime_UTR | 25.0% |
| !!! | CAGAAATGATTTTAGGTTAT+TGG | - | chr5_1:4470175-4470194 | None:intergenic | 25.0% |
| ! | ACCTAAAATCATTTCTGAAT+TGG | + | chr5_1:4470178-4470197 | Msa0712610:three_prime_UTR | 25.0% |
| !! | TCCAATTCAGAAATGATTTT+AGG | - | chr5_1:4470182-4470201 | None:intergenic | 25.0% |
| TAAAATTGGAATCGCGTAAA+TGG | - | chr5_1:4467651-4467670 | None:intergenic | 30.0% | |
| TATGTCTTGTGCAATAATCT+AGG | + | chr5_1:4467746-4467765 | Msa0712610:intron | 30.0% | |
| ATGTCTTGTGCAATAATCTA+GGG | + | chr5_1:4467747-4467766 | Msa0712610:intron | 30.0% | |
| TGCAAAGAAGGATTTCAATT+TGG | + | chr5_1:4467846-4467865 | Msa0712610:CDS | 30.0% | |
| AAGATTATTACCCCAAAAGA+AGG | - | chr5_1:4468326-4468345 | None:intergenic | 30.0% | |
| !! | TTTGTTATGGTGTTTTATGC+GGG | + | chr5_1:4468442-4468461 | Msa0712610:intron | 30.0% |
| !! | TGTTTTATGCGGGTTAATTT+TGG | + | chr5_1:4468452-4468471 | Msa0712610:intron | 30.0% |
| TATATGCAAAACAAGTGTAG+TGG | + | chr5_1:4468811-4468830 | Msa0712610:intron | 30.0% | |
| ! | TTTAATAGAGTTGGTTCCAA+TGG | + | chr5_1:4468875-4468894 | Msa0712610:intron | 30.0% |
| !! | ATTGTTCTATCCAAGTTGAT+AGG | + | chr5_1:4468901-4468920 | Msa0712610:intron | 30.0% |
| !! | TTGTTCTATCCAAGTTGATA+GGG | + | chr5_1:4468902-4468921 | Msa0712610:intron | 30.0% |
| !! | CAAGCATACTCATTTTTATG+TGG | - | chr5_1:4469040-4469059 | None:intergenic | 30.0% |
| CACATAAAAATGAGTATGCT+TGG | + | chr5_1:4469038-4469057 | Msa0712610:intron | 30.0% | |
| CACTTTACAGTAAGAAAGAA+TGG | + | chr5_1:4469119-4469138 | Msa0712610:intron | 30.0% | |
| GAGATAAGAGTAAGAAAGAA+TGG | + | chr5_1:4469141-4469160 | Msa0712610:intron | 30.0% | |
| TTTAGTAGATTATGTCTTGC+TGG | + | chr5_1:4469188-4469207 | Msa0712610:intron | 30.0% | |
| ! | ATAGTGTATACCAACTTGTT+GGG | - | chr5_1:4469608-4469627 | None:intergenic | 30.0% |
| CTCTACCTTACTTTGAATTA+TGG | + | chr5_1:4469633-4469652 | Msa0712610:intron | 30.0% | |
| ATGCACCATAATTCAAAGTA+AGG | - | chr5_1:4469641-4469660 | None:intergenic | 30.0% | |
| ATTATATACATGAGGAAAGC+AGG | - | chr5_1:4469730-4469749 | None:intergenic | 30.0% | |
| CAGAAGAATAAAACTTGATC+AGG | - | chr5_1:4469769-4469788 | None:intergenic | 30.0% | |
| ! | TGTAATGAGAATTTTGAACC+GGG | + | chr5_1:4469996-4470015 | Msa0712610:three_prime_UTR | 30.0% |
| !! | AGAGTGTTTTACAAAGCTAA+CGG | + | chr5_1:4470146-4470165 | Msa0712610:three_prime_UTR | 30.0% |
| ATACCATGATTGCAATGTAG+AGG | - | chr5_1:4467584-4467603 | None:intergenic | 35.0% | |
| ! | GCGTAAATGGATTCAAAGAA+TGG | - | chr5_1:4467638-4467657 | None:intergenic | 35.0% |
| TTATTGCACAAGACATACCT+TGG | - | chr5_1:4467743-4467762 | None:intergenic | 35.0% | |
| AGCTTAATCACTTGCAGATT+TGG | - | chr5_1:4467895-4467914 | None:intergenic | 35.0% | |
| TCAAATCTAGGGAATATGTG+AGG | + | chr5_1:4467926-4467945 | Msa0712610:CDS | 35.0% | |
| CAAATCTAGGGAATATGTGA+GGG | + | chr5_1:4467927-4467946 | Msa0712610:CDS | 35.0% | |
| TTGCTTGGATGAACTATTAC+TGG | + | chr5_1:4467956-4467975 | Msa0712610:CDS | 35.0% | |
| ACTCAATTCCATCATTGGTA+AGG | - | chr5_1:4467984-4468003 | None:intergenic | 35.0% | |
| GAGAAACTCAATTCCATCAT+TGG | - | chr5_1:4467989-4468008 | None:intergenic | 35.0% | |
| ! | ATGATGGAATTGAGTTTCTC+AGG | + | chr5_1:4467989-4468008 | Msa0712610:CDS | 35.0% |
| ATCGCCCTAGGTAATTAATT+TGG | + | chr5_1:4468103-4468122 | Msa0712610:intron | 35.0% | |
| TATTTGGTCGGTTGATTGAA+TGG | + | chr5_1:4468161-4468180 | Msa0712610:intron | 35.0% | |
| !!! | TGAATGGAATGTGTTTTGAC+AGG | + | chr5_1:4468177-4468196 | Msa0712610:intron | 35.0% |
| !!! | GAATGGAATGTGTTTTGACA+GGG | + | chr5_1:4468178-4468197 | Msa0712610:intron | 35.0% |
| !!! | AATGGAATGTGTTTTGACAG+GGG | + | chr5_1:4468179-4468198 | Msa0712610:intron | 35.0% |
| TTTCTCCATCAAATCTTGGT+GGG | - | chr5_1:4468205-4468224 | None:intergenic | 35.0% | |
| TTTGATGGAGAAAGGAGATT+TGG | + | chr5_1:4468212-4468231 | Msa0712610:CDS | 35.0% | |
| GATACGATGATGATTCTGTT+CGG | + | chr5_1:4468414-4468433 | Msa0712610:intron | 35.0% | |
| ! | CTGTTCGGTTCATTTTGTTA+TGG | + | chr5_1:4468429-4468448 | Msa0712610:intron | 35.0% |
| GCAATATACACAAGACACAA+GGG | - | chr5_1:4468531-4468550 | None:intergenic | 35.0% | |
| AGCAATATACACAAGACACA+AGG | - | chr5_1:4468532-4468551 | None:intergenic | 35.0% | |
| TGGATAGAACAATGAACCAT+TGG | - | chr5_1:4468894-4468913 | None:intergenic | 35.0% | |
| !! | ATGTTTTTGTGGGCAGAATT+GGG | - | chr5_1:4468985-4469004 | None:intergenic | 35.0% |
| !! | TATGTTTTTGTGGGCAGAAT+TGG | - | chr5_1:4468986-4469005 | None:intergenic | 35.0% |
| AATTCTGCCCACAAAAACAT+AGG | + | chr5_1:4468985-4469004 | Msa0712610:intron | 35.0% | |
| ATTCTGCCCACAAAAACATA+GGG | + | chr5_1:4468986-4469005 | Msa0712610:intron | 35.0% | |
| ATAAATACCCAGATTGAGAG+AGG | + | chr5_1:4469241-4469260 | Msa0712610:intron | 35.0% | |
| TCTCTTGGATAAAGTAGCAA+AGG | + | chr5_1:4469302-4469321 | Msa0712610:intron | 35.0% | |
| GTACTATTAGCAGTATGTCA+CGG | + | chr5_1:4469431-4469450 | Msa0712610:intron | 35.0% | |
| TACTATTAGCAGTATGTCAC+GGG | + | chr5_1:4469432-4469451 | Msa0712610:intron | 35.0% | |
| TCAAAAGCTAAATCCAGTTG+TGG | - | chr5_1:4469467-4469486 | None:intergenic | 35.0% | |
| AAGGAAATCGAGTCAATATG+AGG | - | chr5_1:4469512-4469531 | None:intergenic | 35.0% | |
| CATAGTGTATACCAACTTGT+TGG | - | chr5_1:4469609-4469628 | None:intergenic | 35.0% | |
| TATTCTTCTGACTCTATTGC+AGG | + | chr5_1:4469779-4469798 | Msa0712610:intron | 35.0% | |
| ATTCTTCTGACTCTATTGCA+GGG | + | chr5_1:4469780-4469799 | Msa0712610:intron | 35.0% | |
| ! | TAAGCATCGTTTGAACTAGT+TGG | - | chr5_1:4469855-4469874 | None:intergenic | 35.0% |
| ! | ATCAAACAACTTGTAGTGGA+GGG | - | chr5_1:4469941-4469960 | None:intergenic | 35.0% |
| ATGGATCAAACAACTTGTAG+TGG | - | chr5_1:4469945-4469964 | None:intergenic | 35.0% | |
| CTACAAGTTGTTTGATCCAT+CGG | + | chr5_1:4469945-4469964 | Msa0712610:three_prime_UTR | 35.0% | |
| TCTACTAAAGCAAAAACACC+CGG | - | chr5_1:4470017-4470036 | None:intergenic | 35.0% | |
| AATGTTTGGACGATAGATCA+AGG | + | chr5_1:4470051-4470070 | Msa0712610:three_prime_UTR | 35.0% | |
| GGTATTTGCAGATCTCTCTA+CGG | - | chr5_1:4467716-4467735 | None:intergenic | 40.0% | |
| ATCTGCAAATACCTCTTCCA+AGG | + | chr5_1:4467723-4467742 | Msa0712610:CDS | 40.0% | |
| !! | GATTTGGCACATCGATTTCT+GGG | - | chr5_1:4467879-4467898 | None:intergenic | 40.0% |
| !! | AGATTTGGCACATCGATTTC+TGG | - | chr5_1:4467880-4467899 | None:intergenic | 40.0% |
| TGATGCAGAGCTTCAAATCT+AGG | + | chr5_1:4467914-4467933 | Msa0712610:CDS | 40.0% | |
| GATGCAGAGCTTCAAATCTA+GGG | + | chr5_1:4467915-4467934 | Msa0712610:CDS | 40.0% | |
| ! | ATGTGAGGGAAACTTTTGCT+TGG | + | chr5_1:4467941-4467960 | Msa0712610:CDS | 40.0% |
| !! | TACTGGTTCCTTACCAATGA+TGG | + | chr5_1:4467973-4467992 | Msa0712610:CDS | 40.0% |
| CTTTCTCCATCAAATCTTGG+TGG | - | chr5_1:4468206-4468225 | None:intergenic | 40.0% | |
| CACCAAGATTTGATGGAGAA+AGG | + | chr5_1:4468204-4468223 | Msa0712610:CDS | 40.0% | |
| CTCCTTTCTCCATCAAATCT+TGG | - | chr5_1:4468209-4468228 | None:intergenic | 40.0% | |
| ! | TTGATTTGATCTCCACAGTG+TGG | + | chr5_1:4468503-4468522 | Msa0712610:intron | 40.0% |
| GTCAAATGCTTCTTCTCTCT+TGG | + | chr5_1:4469287-4469306 | Msa0712610:intron | 40.0% | |
| AAATTGAGTGGGACATTGCT+TGG | + | chr5_1:4469386-4469405 | Msa0712610:intron | 40.0% | |
| GACATTGCTTGGATAGACAA+AGG | + | chr5_1:4469397-4469416 | Msa0712610:intron | 40.0% | |
| TCAATATGAGGTGATTCGAG+GGG | - | chr5_1:4469500-4469519 | None:intergenic | 40.0% | |
| GTCAATATGAGGTGATTCGA+GGG | - | chr5_1:4469501-4469520 | None:intergenic | 40.0% | |
| AGTCAATATGAGGTGATTCG+AGG | - | chr5_1:4469502-4469521 | None:intergenic | 40.0% | |
| ! | TCAAACAACTTGTAGTGGAG+GGG | - | chr5_1:4469940-4469959 | None:intergenic | 40.0% |
| GATCAAACAACTTGTAGTGG+AGG | - | chr5_1:4469942-4469961 | None:intergenic | 40.0% | |
| TTTAGAAGATTGCAGCGCGA+AGG | + | chr5_1:4467512-4467531 | Msa0712610:five_prime_UTR | 45.0% | |
| TTAGAAGATTGCAGCGCGAA+GGG | + | chr5_1:4467513-4467532 | Msa0712610:five_prime_UTR | 45.0% | |
| CTGCCTCTACATTGCAATCA+TGG | + | chr5_1:4467578-4467597 | Msa0712610:exon | 45.0% | |
| CACAAGACATACCTTGGAAG+AGG | - | chr5_1:4467737-4467756 | None:intergenic | 45.0% | |
| !! | GGGAGTTTGCTATGCAAAGA+AGG | + | chr5_1:4467834-4467853 | Msa0712610:CDS | 45.0% |
| GTAGCAGGAACAATCTCAGA+TGG | - | chr5_1:4468030-4468049 | None:intergenic | 45.0% | |
| !! | TCCTGCTACTTTGAAGAAGC+AGG | + | chr5_1:4468041-4468060 | Msa0712610:CDS | 45.0% |
| GATGGAGAAAGGAGATTTGG+TGG | + | chr5_1:4468215-4468234 | Msa0712610:CDS | 45.0% | |
| GGTGAATTTGGAGGAGACAA+AGG | + | chr5_1:4468278-4468297 | Msa0712610:CDS | 45.0% | |
| GAATTTGGAGGAGACAAAGG+TGG | + | chr5_1:4468281-4468300 | Msa0712610:CDS | 45.0% | |
| ! | CTGACTACAGGCCTTCTTTT+GGG | + | chr5_1:4468312-4468331 | Msa0712610:CDS | 45.0% |
| ! | TGACTACAGGCCTTCTTTTG+GGG | + | chr5_1:4468313-4468332 | Msa0712610:CDS | 45.0% |
| !! | AAGTTGATAGGGTTGAGCGT+CGG | + | chr5_1:4468913-4468932 | Msa0712610:intron | 45.0% |
| TCATCCATCATGGCAAGTTC+AGG | - | chr5_1:4468950-4468969 | None:intergenic | 45.0% | |
| ! | GTGATCGGTTTCATCCATCA+TGG | - | chr5_1:4468960-4468979 | None:intergenic | 45.0% |
| ! | TTTTTGTGGGCAGAATTGGG+CGG | - | chr5_1:4468982-4469001 | None:intergenic | 45.0% |
| AATACCCAGATTGAGAGAGG+AGG | + | chr5_1:4469244-4469263 | Msa0712610:intron | 45.0% | |
| TATTAGCAGTATGTCACGGG+CGG | + | chr5_1:4469435-4469454 | Msa0712610:intron | 45.0% | |
| CAATATGAGGTGATTCGAGG+GGG | - | chr5_1:4469499-4469518 | None:intergenic | 45.0% | |
| ! | TGCTTCAGCTCATGCAGTTT+TGG | + | chr5_1:4469889-4469908 | Msa0712610:three_prime_UTR | 45.0% |
| ! | CAAACAACTTGTAGTGGAGG+GGG | - | chr5_1:4469939-4469958 | None:intergenic | 45.0% |
| GACGATAGATCAAGGACTGT+TGG | + | chr5_1:4470059-4470078 | Msa0712610:three_prime_UTR | 45.0% | |
| !! | ATACTTTAATAATATTAAAA+TGG | - | chr5_1:4469335-4469354 | None:intergenic | 5.0% |
| CAGCACAGCAGAAACTTCAG+CGG | - | chr5_1:4467561-4467580 | None:intergenic | 50.0% | |
| GCCTGCTTCTTCAAAGTAGC+AGG | - | chr5_1:4468045-4468064 | None:intergenic | 50.0% | |
| AATTACCTAGGGCGATCACC+AGG | - | chr5_1:4468099-4468118 | None:intergenic | 50.0% | |
| !! | AGATTTGGTGGTGACCGTGA+TGG | + | chr5_1:4468227-4468246 | Msa0712610:CDS | 50.0% |
| ATTCACCAGCAGGTCCTCTT+GGG | - | chr5_1:4468265-4468284 | None:intergenic | 50.0% | |
| AATTCACCAGCAGGTCCTCT+TGG | - | chr5_1:4468266-4468285 | None:intergenic | 50.0% | |
| AGAGGACCTGCTGGTGAATT+TGG | + | chr5_1:4468266-4468285 | Msa0712610:CDS | 50.0% | |
| TCTCCTCCAAATTCACCAGC+AGG | - | chr5_1:4468275-4468294 | None:intergenic | 50.0% | |
| AAAGAAGGCCTGTAGTCAGC+TGG | - | chr5_1:4468311-4468330 | None:intergenic | 50.0% | |
| ! | GCTGACTACAGGCCTTCTTT+TGG | + | chr5_1:4468311-4468330 | Msa0712610:CDS | 50.0% |
| GACGCTCAACCCTATCAACT+TGG | - | chr5_1:4468914-4468933 | None:intergenic | 50.0% | |
| TGCCCACAAAAACATAGGGC+TGG | + | chr5_1:4468990-4469009 | Msa0712610:intron | 50.0% | |
| GCCCACAAAAACATAGGGCT+GGG | + | chr5_1:4468991-4469010 | Msa0712610:intron | 50.0% | |
| !! | GCCCAGCCCTATGTTTTTGT+GGG | - | chr5_1:4468995-4469014 | None:intergenic | 50.0% |
| CACAAAAACATAGGGCTGGG+CGG | + | chr5_1:4468994-4469013 | Msa0712610:intron | 50.0% | |
| ACAAAAACATAGGGCTGGGC+GGG | + | chr5_1:4468995-4469014 | Msa0712610:intron | 50.0% | |
| ! | AGAGAGGAGGCGCAAAACAT+TGG | + | chr5_1:4469257-4469276 | Msa0712610:intron | 50.0% |
| ATTAGCAGTATGTCACGGGC+GGG | + | chr5_1:4469436-4469455 | Msa0712610:intron | 50.0% | |
| !! | GGGTAACGGGTGAAACACAA+AGG | - | chr5_1:4469531-4469550 | None:intergenic | 50.0% |
| ACGAACAACAACCGGTTGCT+CGG | - | chr5_1:4469566-4469585 | None:intergenic | 50.0% | |
| ! | ACCGGTTGTTGTTCGTGTCA+CGG | + | chr5_1:4469570-4469589 | Msa0712610:intron | 50.0% |
| GCAGCGCGAAGGGATTAGAA+AGG | + | chr5_1:4467523-4467542 | Msa0712610:five_prime_UTR | 55.0% | |
| AAGAAGCAGGCTAAGCCAGC+TGG | + | chr5_1:4468054-4468073 | Msa0712610:CDS | 55.0% | |
| TCACCAGGAGGACCACCAAA+GGG | - | chr5_1:4468084-4468103 | None:intergenic | 55.0% | |
| ATCACCAGGAGGACCACCAA+AGG | - | chr5_1:4468085-4468104 | None:intergenic | 55.0% | |
| AGGGGCCCACCAAGATTTGA+TGG | + | chr5_1:4468197-4468216 | Msa0712610:intron | 55.0% | |
| GGACCTGCTGGTGAATTTGG+AGG | + | chr5_1:4468269-4468288 | Msa0712610:CDS | 55.0% | |
| GACACAAGGGAACCACACTG+TGG | - | chr5_1:4468518-4468537 | None:intergenic | 55.0% | |
| !! | TGATAGGGTTGAGCGTCGGA+TGG | + | chr5_1:4468917-4468936 | Msa0712610:intron | 55.0% |
| !! | GATAGGGTTGAGCGTCGGAT+GGG | + | chr5_1:4468918-4468937 | Msa0712610:intron | 55.0% |
| !! | GTTGAGCGTCGGATGGGTTT+GGG | + | chr5_1:4468924-4468943 | Msa0712610:intron | 55.0% |
| TGGGCCTGAACTTGCCATGA+TGG | + | chr5_1:4468943-4468962 | Msa0712610:intron | 55.0% | |
| !! | CGCCCAGCCCTATGTTTTTG+TGG | - | chr5_1:4468996-4469015 | None:intergenic | 55.0% |
| TGCGCCTCCTCTCTCAATCT+GGG | - | chr5_1:4469251-4469270 | None:intergenic | 55.0% | |
| TTGCGCCTCCTCTCTCAATC+TGG | - | chr5_1:4469252-4469271 | None:intergenic | 55.0% | |
| GGTCGGATTTCACGGGTAAC+GGG | - | chr5_1:4469544-4469563 | None:intergenic | 55.0% | |
| GGGTCGGATTTCACGGGTAA+CGG | - | chr5_1:4469545-4469564 | None:intergenic | 55.0% | |
| TTGCTCGGGTCGGATTTCAC+GGG | - | chr5_1:4469551-4469570 | None:intergenic | 55.0% | |
| GTTGCTCGGGTCGGATTTCA+CGG | - | chr5_1:4469552-4469571 | None:intergenic | 55.0% | |
| TGAAATCCGACCCGAGCAAC+CGG | + | chr5_1:4469552-4469571 | Msa0712610:intron | 55.0% | |
| CGAACAACAACCGGTTGCTC+GGG | - | chr5_1:4469565-4469584 | None:intergenic | 55.0% | |
| CCCGTGACACGAACAACAAC+CGG | - | chr5_1:4469574-4469593 | None:intergenic | 55.0% | |
| ! | CCGGTTGTTGTTCGTGTCAC+GGG | + | chr5_1:4469571-4469590 | Msa0712610:intron | 55.0% |
| ! | TCGTGTCACGGGTTGTTGCT+CGG | + | chr5_1:4469582-4469601 | Msa0712610:intron | 55.0% |
| TGTTGCTCGGCCCAACAAGT+TGG | + | chr5_1:4469595-4469614 | Msa0712610:intron | 55.0% | |
| AGCAGGCTAAGCCAGCTGGA+AGG | + | chr5_1:4468058-4468077 | Msa0712610:CDS | 60.0% | |
| AAGCCAGCTGGAAGGCCCTT+TGG | + | chr5_1:4468066-4468085 | Msa0712610:CDS | 60.0% | |
| TACCTAGGGCGATCACCAGG+AGG | - | chr5_1:4468096-4468115 | None:intergenic | 60.0% | |
| !! | GGTGACCGTGATGGATACCG+TGG | + | chr5_1:4468236-4468255 | Msa0712610:CDS | 60.0% |
| !! | GACCGTGATGGATACCGTGG+AGG | + | chr5_1:4468239-4468258 | Msa0712610:CDS | 60.0% |
| GGCCTCCACGGTATCCATCA+CGG | - | chr5_1:4468244-4468263 | None:intergenic | 60.0% | |
| GTGGAGCTCCAGCTGACTAC+AGG | + | chr5_1:4468300-4468319 | Msa0712610:CDS | 60.0% | |
| !! | GGTTGAGCGTCGGATGGGTT+TGG | + | chr5_1:4468923-4468942 | Msa0712610:intron | 60.0% |
| GGGCAGAATTGGGCGGTGAT+CGG | - | chr5_1:4468975-4468994 | None:intergenic | 60.0% | |
| AAAACATAGGGCTGGGCGGG+TGG | + | chr5_1:4468998-4469017 | Msa0712610:intron | 60.0% | |
| AAACATAGGGCTGGGCGGGT+GGG | + | chr5_1:4468999-4469018 | Msa0712610:intron | 60.0% | |
| CAACAACCGGTTGCTCGGGT+CGG | - | chr5_1:4469561-4469580 | None:intergenic | 60.0% | |
| CTGACTCTATTGCAGGGCCC+TGG | + | chr5_1:4469786-4469805 | Msa0712610:intron | 60.0% | |
| ACTCTATTGCAGGGCCCTGG+TGG | + | chr5_1:4469789-4469808 | Msa0712610:intron | 60.0% | |
| CGAAGCCAGGTCTACCACCA+GGG | - | chr5_1:4469806-4469825 | None:intergenic | 60.0% | |
| CCTGGTGGTAGACCTGGCTT+CGG | + | chr5_1:4469804-4469823 | Msa0712610:CDS | 60.0% | |
| !! | GGTCGTGGTTCTGGTGGCTT+TGG | + | chr5_1:4469825-4469844 | Msa0712610:CDS | 60.0% |
| CCACCAAAGGGCCTTCCAGC+TGG | - | chr5_1:4468072-4468091 | None:intergenic | 65.0% | |
| CCAGCTGGAAGGCCCTTTGG+TGG | + | chr5_1:4468069-4468088 | Msa0712610:CDS | 65.0% | |
| ! | AGGCCCTTTGGTGGTCCTCC+TGG | + | chr5_1:4468078-4468097 | Msa0712610:CDS | 65.0% |
| GTCCTCCTGGTGATCGCCCT+AGG | + | chr5_1:4468091-4468110 | Msa0712610:CDS | 65.0% | |
| GGATACCGTGGAGGCCCAAG+AGG | + | chr5_1:4468248-4468267 | Msa0712610:CDS | 65.0% | |
| CAGGTCCTCTTGGGCCTCCA+CGG | - | chr5_1:4468256-4468275 | None:intergenic | 65.0% | |
| CCGAAGCCAGGTCTACCACC+AGG | - | chr5_1:4469807-4469826 | None:intergenic | 65.0% | |
| GGTAGACCTGGCTTCGGTCG+TGG | + | chr5_1:4469810-4469829 | Msa0712610:CDS | 65.0% | |
| CCAGAACCACGACCGAAGCC+AGG | - | chr5_1:4469819-4469838 | None:intergenic | 65.0% | |
| CCTGGCTTCGGTCGTGGTTC+TGG | + | chr5_1:4469816-4469835 | Msa0712610:CDS | 65.0% | |
| !! | GGCTTCGGTCGTGGTTCTGG+TGG | + | chr5_1:4469819-4469838 | Msa0712610:CDS | 65.0% |
| GGAGGCCCAAGAGGACCTGC+TGG | + | chr5_1:4468257-4468276 | Msa0712610:CDS | 70.0% | |
| ATAGGGCTGGGCGGGTGGGT+TGG | + | chr5_1:4469003-4469022 | Msa0712610:intron | 70.0% | |
| CGGGCGGGTGTGTCCACAAC+TGG | + | chr5_1:4469451-4469470 | Msa0712610:intron | 70.0% | |
| CAGGGCCCTGGTGGTAGACC+TGG | + | chr5_1:4469798-4469817 | Msa0712610:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 4467505 | 4470228 | 4467505 | ID=Msa0712610;Name=Msa0712610 |
| chr5_1 | mRNA | 4467505 | 4470228 | 4467505 | ID=Msa0712610-mRNA-1;Parent=Msa0712610;Name=Msa0712610-mRNA-1;_AED=0.08;_eAED=0.08;_QI=92|1|1|1|1|1|5|353|180 |
| chr5_1 | exon | 4467505 | 4467599 | 4467505 | ID=Msa0712610-mRNA-1:exon:1781;Parent=Msa0712610-mRNA-1 |
| chr5_1 | exon | 4467696 | 4467744 | 4467696 | ID=Msa0712610-mRNA-1:exon:1782;Parent=Msa0712610-mRNA-1 |
| chr5_1 | exon | 4467833 | 4468112 | 4467833 | ID=Msa0712610-mRNA-1:exon:1783;Parent=Msa0712610-mRNA-1 |
| chr5_1 | exon | 4468199 | 4468334 | 4468199 | ID=Msa0712610-mRNA-1:exon:1784;Parent=Msa0712610-mRNA-1 |
| chr5_1 | exon | 4469801 | 4470228 | 4469801 | ID=Msa0712610-mRNA-1:exon:1785;Parent=Msa0712610-mRNA-1 |
| chr5_1 | five_prime_UTR | 4467505 | 4467596 | 4467505 | ID=Msa0712610-mRNA-1:five_prime_utr;Parent=Msa0712610-mRNA-1 |
| chr5_1 | CDS | 4467597 | 4467599 | 4467597 | ID=Msa0712610-mRNA-1:cds;Parent=Msa0712610-mRNA-1 |
| chr5_1 | CDS | 4467696 | 4467744 | 4467696 | ID=Msa0712610-mRNA-1:cds;Parent=Msa0712610-mRNA-1 |
| chr5_1 | CDS | 4467833 | 4468112 | 4467833 | ID=Msa0712610-mRNA-1:cds;Parent=Msa0712610-mRNA-1 |
| chr5_1 | CDS | 4468199 | 4468334 | 4468199 | ID=Msa0712610-mRNA-1:cds;Parent=Msa0712610-mRNA-1 |
| chr5_1 | CDS | 4469801 | 4469875 | 4469801 | ID=Msa0712610-mRNA-1:cds;Parent=Msa0712610-mRNA-1 |
| chr5_1 | three_prime_UTR | 4469876 | 4470228 | 4469876 | ID=Msa0712610-mRNA-1:three_prime_utr;Parent=Msa0712610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
