AlfalfaGEDB | Msa1126520

M. sativa cultivar zhongmu-4 / Msa1126520

KEGG: K02917
GO: GO:0002181 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022613 GO:0022625 GO:0022626 GO:0032991 GO:0034641 GO:0034645 GO:0042254 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0071704 GO:0071840 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF01247.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1126520	XP_013441621.1	100.000	112	0	0	1	112	1	112	2.21e-75	228

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1126520	sp\|Q9C912\|R35A3_ARATH	91.964	112	9	0	1	112	1	112	6.80e-73	214

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1126520	I3T9M0	100.000	112	0	0	1	112	1	112	1.05e-75	228

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003330	Msa1126520	0.814828	1.262623e-51	-8.615850e-47
Msa0027590	Msa1126520	0.871498	6.530588e-67	-8.615850e-47
Msa0032780	Msa1126520	0.839193	1.834857e-57	-8.615850e-47
Msa0042480	Msa1126520	0.840562	8.071434e-58	-8.615850e-47
Msa0045730	Msa1126520	0.822017	2.965717e-53	-8.615850e-47
Msa0072570	Msa1126520	0.826357	2.835382e-54	-8.615850e-47
Msa0075350	Msa1126520	0.877301	7.012252e-69	-8.615850e-47
Msa0079590	Msa1126520	0.843256	1.567429e-58	-8.615850e-47
Msa0087910	Msa1126520	0.805827	1.106101e-49	-8.615850e-47
Msa0100420	Msa1126520	0.807581	4.712502e-50	-8.615850e-47
Msa0114570	Msa1126520	0.840317	9.350824e-58	-8.615850e-47
Msa0116130	Msa1126520	0.816796	4.598196e-52	-8.615850e-47
Msa0116670	Msa1126520	0.817838	2.678542e-52	-8.615850e-47
Msa0604960	Msa1126520	0.865163	7.209270e-65	-8.615850e-47
Msa0605890	Msa1126520	0.804321	2.285228e-49	-8.615850e-47
Msa0617540	Msa1126520	0.858199	9.705192e-63	-8.615850e-47
Msa0622230	Msa1126520	0.811416	7.076687e-51	-8.615850e-47
Msa0622750	Msa1126520	0.838252	3.211916e-57	-8.615850e-47
Msa0623200	Msa1126520	0.814581	1.432025e-51	-8.615850e-47
Msa0643820	Msa1126520	0.824317	8.617700e-54	-8.615850e-47
Msa0649890	Msa1126520	0.845087	5.054126e-59	-8.615850e-47
Msa0656410	Msa1126520	0.820712	5.933489e-53	-8.615850e-47
Msa0681220	Msa1126520	0.813297	2.749359e-51	-8.615850e-47
Msa0683660	Msa1126520	0.810444	1.149257e-50	-8.615850e-47
Msa0705800	Msa1126520	0.922436	9.853578e-89	-8.615850e-47
Msa0712610	Msa1126520	0.939627	9.251873e-100	-8.615850e-47
Msa0717380	Msa1126520	0.809304	2.021293e-50	-8.615850e-47
Msa0729200	Msa1126520	0.826632	2.438728e-54	-8.615850e-47
Msa0748350	Msa1126520	0.808683	2.745005e-50	-8.615850e-47
Msa0752910	Msa1126520	0.901150	3.582612e-78	-8.615850e-47
Msa0758420	Msa1126520	0.806905	6.554592e-50	-8.615850e-47
Msa0769590	Msa1126520	0.815668	8.214661e-52	-8.615850e-47
Msa0781080	Msa1126520	0.893436	6.296774e-75	-8.615850e-47
Msa0786660	Msa1126520	0.835616	1.513045e-56	-8.615850e-47
Msa0788380	Msa1126520	0.881664	1.989008e-70	-8.615850e-47
Msa0792420	Msa1126520	0.845240	4.593174e-59	-8.615850e-47
Msa0799830	Msa1126520	0.810240	1.271718e-50	-8.615850e-47
Msa0822580	Msa1126520	0.921499	3.306706e-88	-8.615850e-47
Msa0827380	Msa1126520	0.868959	4.431315e-66	-8.615850e-47
Msa0838070	Msa1126520	0.849272	3.596941e-60	-8.615850e-47
Msa0128330	Msa1126520	0.810482	1.127734e-50	-8.615850e-47
Msa0128750	Msa1126520	0.825764	3.923048e-54	-8.615850e-47
Msa0133540	Msa1126520	0.816168	6.353623e-52	-8.615850e-47
Msa0134580	Msa1126520	0.810623	1.051312e-50	-8.615850e-47
Msa0138890	Msa1126520	0.842287	2.835399e-58	-8.615850e-47
Msa0167860	Msa1126520	0.826114	3.239353e-54	-8.615850e-47
Msa0172930	Msa1126520	0.828370	9.336130e-55	-8.615850e-47
Msa0173530	Msa1126520	0.813948	1.976500e-51	-8.615850e-47
Msa0174580	Msa1126520	0.809874	1.525246e-50	-8.615850e-47
Msa0181490	Msa1126520	0.823301	1.491292e-53	-8.615850e-47
Msa0191450	Msa1126520	0.898076	7.559568e-77	-8.615850e-47
Msa0191550	Msa1126520	0.872394	3.288679e-67	-8.615850e-47
Msa0192750	Msa1126520	0.870035	1.976938e-66	-8.615850e-47
Msa0194940	Msa1126520	0.877755	4.873360e-69	-8.615850e-47
Msa0210330	Msa1126520	0.804341	2.262971e-49	-8.615850e-47
Msa0210360	Msa1126520	0.865329	6.391676e-65	-8.615850e-47
Msa0219120	Msa1126520	0.822462	2.338694e-53	-8.615850e-47
Msa0222730	Msa1126520	0.832389	9.721117e-56	-8.615850e-47
Msa0229150	Msa1126520	0.863151	3.054128e-64	-8.615850e-47
Msa0235050	Msa1126520	0.832757	7.879771e-56	-8.615850e-47
Msa0369410	Msa1126520	0.839803	1.273167e-57	-8.615850e-47
Msa0376830	Msa1126520	0.827725	1.334824e-54	-8.615850e-47
Msa0426090	Msa1126520	0.833698	4.593921e-56	-8.615850e-47
Msa0426250	Msa1126520	0.815224	1.031592e-51	-8.615850e-47
Msa0436750	Msa1126520	0.841808	3.794725e-58	-8.615850e-47
Msa0438960	Msa1126520	0.808519	2.975709e-50	-8.615850e-47
Msa0463520	Msa1126520	0.837550	4.864801e-57	-8.615850e-47
Msa0471880	Msa1126520	0.834864	2.342386e-56	-8.615850e-47
Msa0472480	Msa1126520	0.832948	7.062369e-56	-8.615850e-47
Msa0473570	Msa1126520	0.824386	8.300482e-54	-8.615850e-47
Msa0481520	Msa1126520	0.893270	7.349869e-75	-8.615850e-47
Msa0481850	Msa1126520	0.918149	2.223836e-86	-8.615850e-47
Msa1021120	Msa1126520	0.837540	4.893825e-57	-8.615850e-47
Msa1037290	Msa1126520	0.931997	1.647369e-94	-8.615850e-47
Msa1039470	Msa1126520	0.801083	1.064551e-48	-8.615850e-47
Msa1040160	Msa1126520	0.833925	4.028877e-56	-8.615850e-47
Msa1041680	Msa1126520	0.849997	2.256563e-60	-8.615850e-47
Msa1042100	Msa1126520	0.856414	3.268986e-62	-8.615850e-47
Msa1058700	Msa1126520	0.824071	9.841981e-54	-8.615850e-47
Msa1078870	Msa1126520	0.822920	1.829365e-53	-8.615850e-47
Msa1078980	Msa1126520	0.807699	4.450179e-50	-8.615850e-47
Msa1080350	Msa1126520	0.902406	1.001696e-78	-8.615850e-47
Msa1082170	Msa1126520	0.913648	4.823051e-84	-8.615850e-47
Msa1083370	Msa1126520	0.825995	3.458590e-54	-8.615850e-47
Msa1096900	Msa1126520	0.839199	1.827971e-57	-8.615850e-47
Msa0258850	Msa1126520	0.802448	5.583852e-49	-8.615850e-47
Msa0281370	Msa1126520	0.809765	1.609308e-50	-8.615850e-47
Msa0297830	Msa1126520	0.846591	1.973375e-59	-8.615850e-47
Msa0298870	Msa1126520	0.826016	3.418309e-54	-8.615850e-47
Msa0301220	Msa1126520	0.833836	4.241830e-56	-8.615850e-47
Msa0306690	Msa1126520	0.816859	4.451003e-52	-8.615850e-47
Msa0312210	Msa1126520	0.825849	3.746254e-54	-8.615850e-47
Msa0313520	Msa1126520	0.820642	6.157869e-53	-8.615850e-47
Msa0315430	Msa1126520	0.837748	4.328438e-57	-8.615850e-47
Msa0333910	Msa1126520	0.811636	6.341748e-51	-8.615850e-47
Msa0334030	Msa1126520	0.849252	3.643700e-60	-8.615850e-47
Msa0335840	Msa1126520	0.852553	4.281122e-61	-8.615850e-47
Msa0337670	Msa1126520	0.827021	1.968781e-54	-8.615850e-47
Msa0348830	Msa1126520	0.804636	1.964645e-49	-8.615850e-47
Msa1125860	Msa1126520	0.895721	7.323655e-76	-8.615850e-47
Msa1126060	Msa1126520	0.893655	5.133539e-75	-8.615850e-47
Msa1126520	Msa1159090	-0.825645	4.187943e-54	-8.615850e-47
Msa1126520	Msa1164150	0.929366	7.706647e-93	-8.615850e-47
Msa1126520	Msa1165640	0.819658	1.034432e-52	-8.615850e-47
Msa1126520	Msa1166570	0.857597	1.464600e-62	-8.615850e-47
Msa1126520	Msa1167540	0.839545	1.486117e-57	-8.615850e-47
Msa1126520	Msa1167550	0.807993	3.852260e-50	-8.615850e-47
Msa1126520	Msa1169180	0.802832	4.652543e-49	-8.615850e-47
Msa1126520	Msa1180000	0.816008	6.898410e-52	-8.615850e-47
Msa1126520	Msa1186030	0.883926	2.966370e-71	-8.615850e-47
Msa1126520	Msa1218170	0.856948	2.276935e-62	-8.615850e-47
Msa1126520	Msa1236980	0.812531	4.045481e-51	-8.615850e-47
Msa1126520	Msa1240270	0.883164	5.656114e-71	-8.615850e-47
Msa1126520	Msa1256840	0.858689	6.933538e-63	-8.615850e-47
Msa1126520	Msa1258540	0.837405	5.298875e-57	-8.615850e-47
Msa1126520	Msa1270640	0.823108	1.654039e-53	-8.615850e-47
Msa1126520	Msa1270710	0.817919	2.568596e-52	-8.615850e-47
Msa1126520	Msa1278070	0.805413	1.351319e-49	-8.615850e-47
Msa1126520	Msa1295150	0.859668	3.528402e-63	-8.615850e-47
Msa1126520	Msa1311400	0.886928	2.229890e-72	-8.615850e-47
Msa1126520	Msa1321790	0.808163	3.544174e-50	-8.615850e-47
Msa1126520	Msa1332250	0.842680	2.230390e-58	-8.615850e-47
Msa1126520	Msa1352140	0.837529	4.926682e-57	-8.615850e-47
Msa1126520	Msa1356790	0.934560	3.343258e-96	-8.615850e-47
Msa1126520	Msa1362790	0.858059	1.068017e-62	-8.615850e-47
Msa1126520	Msa1368920	0.932299	1.048674e-94	-8.615850e-47
Msa1126520	Msa1369190	0.825497	4.538578e-54	-8.615850e-47
Msa1126520	Msa1374240	0.880687	4.471907e-70	-8.615850e-47
Msa1126520	Msa1374480	0.831812	1.349962e-55	-8.615850e-47
Msa1126520	Msa1392590	0.890156	1.270281e-73	-8.615850e-47
Msa1126520	Msa1397100	0.836122	1.125903e-56	-8.615850e-47
Msa1126520	Msa1403910	0.865490	5.686639e-65	-8.615850e-47
Msa1126520	Msa1406080	0.877767	4.824250e-69	-8.615850e-47
Msa1126520	Msa1418770	0.842753	2.132910e-58	-8.615850e-47
Msa1126520	Msa1426120	0.823768	1.159469e-53	-8.615850e-47
Msa1126520	Msa1426490	0.826947	2.051002e-54	-8.615850e-47
Msa1126520	Msa1446410	0.846973	1.550665e-59	-8.615850e-47
Msa1126520	Msa1455950	0.840906	6.555611e-58	-8.615850e-47
Msa1126520	Msa1463570	0.821255	4.448979e-53	-8.615850e-47
Msa0483110	Msa1126520	0.840131	1.045985e-57	-8.615850e-47
Msa0484730	Msa1126520	0.840773	7.104412e-58	-8.615850e-47
Msa0517480	Msa1126520	0.807859	4.115116e-50	-8.615850e-47
Msa0529900	Msa1126520	0.826311	2.908763e-54	-8.615850e-47
Msa0546030	Msa1126520	0.831568	1.550826e-55	-8.615850e-47
Msa0550420	Msa1126520	0.823059	1.698257e-53	-8.615850e-47
Msa0573500	Msa1126520	0.811301	7.498661e-51	-8.615850e-47
Msa0573550	Msa1126520	0.813633	2.318749e-51	-8.615850e-47
Msa0579830	Msa1126520	0.849730	2.679771e-60	-8.615850e-47
Msa0582320	Msa1126520	0.801986	6.951120e-49	-8.615850e-47
Msa0584030	Msa1126520	0.860977	1.417110e-63	-8.615850e-47
Msa0588630	Msa1126520	-0.800887	1.166966e-48	-8.615850e-47
Msa0591050	Msa1126520	0.831849	1.322233e-55	-8.615850e-47
Msa0596370	Msa1126520	0.830418	2.970140e-55	-8.615850e-47
Msa0597240	Msa1126520	0.802301	5.988057e-49	-8.615850e-47
Msa0861320	Msa1126520	0.830912	2.248371e-55	-8.615850e-47
Msa0876170	Msa1126520	0.828129	1.066991e-54	-8.615850e-47
Msa0888810	Msa1126520	0.809389	1.938779e-50	-8.615850e-47
Msa0915540	Msa1126520	0.849481	3.145484e-60	-8.615850e-47
Msa0929700	Msa1126520	0.815066	1.118077e-51	-8.615850e-47
Msa0945480	Msa1126520	0.870416	1.483979e-66	-8.615850e-47
Msa0966670	Msa1126520	0.825714	4.032502e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa1126520	MtrunA17_Chr7g0268051	100.000	112	0	1	112	1	112	2.03e-79	228
Msa1126520	MtrunA17_Chr5g0436331	94.643	112	6	1	112	26	137	4.54e-77	223
Msa1126520	MtrunA17_Chr7g0268081	86.667	90	12	18	107	10	99	4.03e-53	161
Msa1126520	MtrunA17_Chr7g0268061	86.667	90	12	18	107	10	99	4.03e-53	161
Msa1126520	MtrunA17_Chr7g0268071	92.771	83	6	17	99	8	90	4.50e-53	161

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa1126520	AT1G74270.1	91.964	112	9	1	112	1	112	6.92e-74	214
Msa1126520	AT1G07070.1	91.071	112	10	1	112	1	112	7.72e-74	214
Msa1126520	AT3G55750.1	87.387	111	14	2	112	1	111	5.18e-71	207
Msa1126520	AT1G41880.1	86.486	111	15	2	112	1	111	7.87e-71	207
Msa1126520	AT1G41880.2	86.486	111	15	2	112	1	111	7.87e-71	207

Find 81 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGGCATGCTAATTGGTTTA+TGG	0.181001	7_3:+78080954	Msa1126520:three_prime_UTR
GGGAAGATTTGACTTGAATT+TGG	0.232635	7_3:-78077179	None:intergenic
TTAAATTATTACCATTGATT+TGG	0.240677	7_3:-78077203	None:intergenic
TGGTGTTCACTCCTTCAATT+TGG	0.242520	7_3:-78077021	None:intergenic
TAAATTATTACCATTGATTT+GGG	0.268294	7_3:-78077202	None:intergenic
CTGTTTAGACTGTTCTTTGA+TGG	0.273778	7_3:+78080206	Msa1126520:three_prime_UTR
CCCGGGTTAAGCTTATTATT+AGG	0.278102	7_3:-78076222	None:intergenic
AGCTTATTATTAGGGTTTCT+AGG	0.283858	7_3:-78076213	None:intergenic
CCGGGTTAAGCTTATTATTA+GGG	0.287195	7_3:-78076221	None:intergenic
TTATTATACCCGAGGCTTCC+CGG	0.304658	7_3:-78076240	None:intergenic
TGTTGCAGATTCAGGTGATT+AGG	0.325385	7_3:+78080108	Msa1126520:intron
GCCCCATATGCAGCGGTAAT+GGG	0.380708	7_3:-78077116	None:intergenic
CCAGAGATGTGTTTGGGTAC+TGG	0.398125	7_3:-78076997	None:intergenic
ATTTGGACCAGAGATGTGTT+TGG	0.405595	7_3:-78077004	None:intergenic
GAACCCATTACCGCTGCATA+TGG	0.409627	7_3:+78077113	Msa1126520:CDS
TGCCCCATATGCAGCGGTAA+TGG	0.410420	7_3:-78077117	None:intergenic
GACGTCAAGGAGAGCGTGTC+AGG	0.412439	7_3:+78076342	Msa1126520:CDS
TTTGGACCAGAGATGTGTTT+GGG	0.422500	7_3:-78077003	None:intergenic
GCTTATTATTAGGGTTTCTA+GGG	0.422920	7_3:-78076212	None:intergenic
AAAGTCATAAGTTGGGTAAA+CGG	0.423107	7_3:+78080887	Msa1126520:three_prime_UTR
GTGGACTTGGTTATCTCATA+TGG	0.425109	7_3:+78080286	Msa1126520:three_prime_UTR
TTGGTATGCTGGCAAGAAAA+TGG	0.428506	7_3:+78077057	Msa1126520:CDS
AGTTTACCTCATATATTGCT+TGG	0.429962	7_3:-78077330	None:intergenic
GTTTCTAGGGGTTCACACTT+TGG	0.434060	7_3:-78076199	None:intergenic
AATGTTGTGTACTGCTGTAT+TGG	0.441877	7_3:+78080229	Msa1126520:three_prime_UTR
GATTAGGTCAGTAGAGTTGC+GGG	0.443533	7_3:+78080124	Msa1126520:three_prime_UTR
AAGCTTAACCCGGGAAGCCT+CGG	0.445106	7_3:+78076231	Msa1126520:five_prime_UTR
CTAGTAAATGAAATGAATAT+AGG	0.445187	7_3:+78080851	Msa1126520:three_prime_UTR
CAGCACCATGTGTGTGGACT+TGG	0.449535	7_3:+78080273	Msa1126520:three_prime_UTR
GAAGAGGTAGCTTGGTATGC+TGG	0.459649	7_3:+78077046	Msa1126520:CDS
AACCCATTACCGCTGCATAT+GGG	0.459805	7_3:+78077114	Msa1126520:CDS
ACGTCCCTTCACCATCTTCA+CGG	0.462419	7_3:-78076324	None:intergenic
ACATCTCTGGTCCAAATTGA+AGG	0.462436	7_3:+78077010	Msa1126520:CDS
GTTTACCTCATATATTGCTT+GGG	0.467769	7_3:-78077329	None:intergenic
TACGTGAGGGGTACAATCCT+TGG	0.470557	7_3:+78076877	Msa1126520:CDS
TATTATACCCGAGGCTTCCC+GGG	0.478942	7_3:-78076239	None:intergenic
GGTTCCATTCTTCTTCACCT+TGG	0.492441	7_3:-78077095	None:intergenic
GTACAATCCTTGGATACAAA+AGG	0.498010	7_3:+78076887	Msa1126520:CDS
AGCTTAACCCGGGAAGCCTC+GGG	0.505162	7_3:+78076232	Msa1126520:five_prime_UTR
CCCTAATAATAAGCTTAACC+CGG	0.506991	7_3:+78076221	Msa1126520:five_prime_UTR
AAGGCCAAGGTGAAGAAGAA+TGG	0.517743	7_3:+78077091	Msa1126520:CDS
GTTTGGGTACTGGTTTACTT+TGG	0.518411	7_3:-78076987	None:intergenic
ATACCAAGCTACCTCTTCCT+TGG	0.523366	7_3:-78077041	None:intergenic
GCATATGGGGCAAGGTTACA+AGG	0.526923	7_3:+78077128	Msa1126520:CDS
CCAGTACCCAAACACATCTC+TGG	0.530530	7_3:+78076997	Msa1126520:CDS
TTGTATTAGGCTTTACGTGA+GGG	0.533599	7_3:+78076864	Msa1126520:intron
ACCCATTACCGCTGCATATG+GGG	0.539984	7_3:+78077115	Msa1126520:CDS
CTTCACGGCAACTCAAACGC+AGG	0.543841	7_3:-78076309	None:intergenic
CGTTTGAGTTGCCGTGAAGA+TGG	0.544753	7_3:+78076313	Msa1126520:exon
TTTGTATTAGGCTTTACGTG+AGG	0.553810	7_3:+78076863	Msa1126520:intron
AGGAGTGAACACCAAGGAAG+AGG	0.555068	7_3:+78077030	Msa1126520:CDS
ATGTACCCAAGCAATATATG+AGG	0.556382	7_3:+78077324	Msa1126520:CDS
AATTATTACCATTGATTTGG+GGG	0.558553	7_3:-78077200	None:intergenic
GGCATATATCTACAAGGCCA+AGG	0.574061	7_3:+78077078	Msa1126520:CDS
TGATTAGGTCAGTAGAGTTG+CGG	0.585635	7_3:+78080123	Msa1126520:three_prime_UTR
AAATTATTACCATTGATTTG+GGG	0.588097	7_3:-78077201	None:intergenic
ACACCAAGGAAGAGGTAGCT+TGG	0.593143	7_3:+78077038	Msa1126520:CDS
GTACATAAATACTCTTACGC+GGG	0.601920	7_3:-78077307	None:intergenic
ACGGCAACTCAAACGCAGGA+TGG	0.603112	7_3:-78076305	None:intergenic
TACAGTCAGCACCATGTGTG+TGG	0.604128	7_3:+78080267	Msa1126520:three_prime_UTR
TGTATTAGGCTTTACGTGAG+GGG	0.604275	7_3:+78076865	Msa1126520:intron
GGCAAGGTTACAAGGCCACA+TGG	0.606069	7_3:+78077136	Msa1126520:CDS
CCTAATAATAAGCTTAACCC+GGG	0.606999	7_3:+78076222	Msa1126520:five_prime_UTR
AAAATAGACAAAATTCCTTG+AGG	0.608684	7_3:-78080161	None:intergenic
AAGATGGTGAAGGGACGTCA+AGG	0.609822	7_3:+78076329	Msa1126520:exon
CTTATTATTAGGGTTTCTAG+GGG	0.612794	7_3:-78076211	None:intergenic
CCTGTCGGTTCTGAGAGTGT+TGG	0.614886	7_3:+78076276	Msa1126520:five_prime_UTR
ATTATTACCATTGATTTGGG+GGG	0.627666	7_3:-78077199	None:intergenic
GAAAATGGCATATATCTACA+AGG	0.630318	7_3:+78077072	Msa1126520:CDS
CCAACACTCTCAGAACCGAC+AGG	0.637783	7_3:-78076276	None:intergenic
GGTACATAAATACTCTTACG+CGG	0.638869	7_3:-78077308	None:intergenic
GATAACCAAGTCCACACACA+TGG	0.640711	7_3:-78080278	None:intergenic
TTACCGCTGCATATGGGGCA+AGG	0.645005	7_3:+78077120	Msa1126520:CDS
GAACAGTCTAAACAGAAGAA+CGG	0.650910	7_3:-78080198	None:intergenic
AGTTGCCGTGAAGATGGTGA+AGG	0.661868	7_3:+78076319	Msa1126520:exon
AAAATCCTAAAATCGCCTGT+CGG	0.675633	7_3:+78076261	Msa1126520:five_prime_UTR
TAACCTTGCCCCATATGCAG+CGG	0.677626	7_3:-78077123	None:intergenic
ACAAGGCCACATGGTAACAG+TGG	0.690947	7_3:+78077145	Msa1126520:CDS
GTTGCCGTGAAGATGGTGAA+GGG	0.718264	7_3:+78076320	Msa1126520:exon
ACAATACCACTGTTACCATG+TGG	0.724821	7_3:-78077151	None:intergenic
AATTGAAGGAGTGAACACCA+AGG	0.776962	7_3:+78077024	Msa1126520:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATAATATTAGCTTATTATA+TGG	-	chr7_3:78076832-78076851	None:intergenic	10.0%
!!!	TTTTTTTTTTAATCATCATT+TGG	+	chr7_3:78077237-78077256	Msa1126520:intron	10.0%
!!!	TTTTTTTTTAATCATCATTT+GGG	+	chr7_3:78077238-78077257	Msa1126520:intron	10.0%
!!	ATTTATGTTTAAAGAATTAA+TGG	-	chr7_3:78077986-78078005	None:intergenic	10.0%
!!!	ATCTCATATTTTTTTATTTA+TGG	-	chr7_3:78078179-78078198	None:intergenic	10.0%
!!!	TTTTAATAGATTATTTTTAG+AGG	+	chr7_3:78078377-78078396	Msa1126520:intron	10.0%
!!	TGTGAAAAAAATAAAATAAA+AGG	-	chr7_3:78078508-78078527	None:intergenic	10.0%
!!!	AATGCATTTTTTAATTATAA+TGG	+	chr7_3:78078949-78078968	Msa1126520:intron	10.0%
!!	TTATTATAAAATTACCATAA+AGG	-	chr7_3:78079042-78079061	None:intergenic	10.0%
!!	AATTTAATTAAGGAAAATTT+AGG	+	chr7_3:78079643-78079662	Msa1126520:intron	10.0%
!!	TAAAGAATAAAAAGAATTAA+TGG	+	chr7_3:78079668-78079687	Msa1126520:intron	10.0%
!!!	AATTTTGCAATTTTATAAAT+AGG	+	chr7_3:78080012-78080031	Msa1126520:intron	10.0%
!!!	ATTTTGCAATTTTATAAATA+GGG	+	chr7_3:78080013-78080032	Msa1126520:intron	10.0%
!!	TAGATAATTAAAGATATTAA+CGG	-	chr7_3:78080507-78080526	None:intergenic	10.0%
!!	AAAGTAAAATATATTGTATT+GGG	-	chr7_3:78080718-78080737	None:intergenic	10.0%
!!	AAAAGTAAAATATATTGTAT+TGG	-	chr7_3:78080719-78080738	None:intergenic	10.0%
!!	AAGAAAAATGTATAAATAAA+GGG	-	chr7_3:78080742-78080761	None:intergenic	10.0%
!!	TAAGAAAAATGTATAAATAA+AGG	-	chr7_3:78080743-78080762	None:intergenic	10.0%
!!!	ATCATTGTTTTTAATTCATT+TGG	+	chr7_3:78076492-78076511	Msa1126520:intron	15.0%
!!!	ATTTATTTTTGAATGATAGT+AGG	-	chr7_3:78076551-78076570	None:intergenic	15.0%
!!!	AAACATGAAAATTTTCAAAT+TGG	-	chr7_3:78076741-78076760	None:intergenic	15.0%
!!!	ATTTTTGTTTCATTTGTATT+AGG	+	chr7_3:78076851-78076870	Msa1126520:intron	15.0%
!!!	TAAATTATTACCATTGATTT+GGG	-	chr7_3:78077205-78077224	None:intergenic	15.0%
!!!	TTAAATTATTACCATTGATT+TGG	-	chr7_3:78077206-78077225	None:intergenic	15.0%
!!	TGTCAAAAAAAAAAAAAAAC+AGG	-	chr7_3:78077959-78077978	None:intergenic	15.0%
!!	TGAATGAATAAAAAACATAA+TGG	-	chr7_3:78078592-78078611	None:intergenic	15.0%
!!!	TTTTTTTAAGAATAGAAAAG+TGG	+	chr7_3:78079285-78079304	Msa1126520:intron	15.0%
!!!	GGTTTTATTTGTAAAAAAAA+AGG	+	chr7_3:78079306-78079325	Msa1126520:intron	15.0%
!!!	TTTTATTGAATCATCATTTT+AGG	+	chr7_3:78079497-78079516	Msa1126520:intron	15.0%
!!	ATTATGTTTAATTCCTTAAA+AGG	+	chr7_3:78079608-78079627	Msa1126520:intron	15.0%
!!!	TTAATTCTTTAATCCTTTTA+AGG	-	chr7_3:78079624-78079643	None:intergenic	15.0%
!!!	GACACTTTTTTTTAAAAAAT+GGG	-	chr7_3:78080347-78080366	None:intergenic	15.0%
!!!	AAATTATTACCATTGATTTG+GGG	-	chr7_3:78077204-78077223	None:intergenic	20.0%
!!!	GCTTACATATTTTACAAATA+TGG	+	chr7_3:78077493-78077512	Msa1126520:intron	20.0%
!!	TATCTAATATGAGAACTATA+TGG	+	chr7_3:78077706-78077725	Msa1126520:intron	20.0%
!!	AAAAAAAAAAAACAGGTTTG+AGG	-	chr7_3:78079702-78079721	None:intergenic	20.0%
!!	AAATCCATATTTCTTCATTA+TGG	-	chr7_3:78078093-78078112	None:intergenic	20.0%
!!	AAAAAGAATCGTGTATTTAA+TGG	-	chr7_3:78078121-78078140	None:intergenic	20.0%
!!	GAGAAACACAAAATATATAT+AGG	-	chr7_3:78078623-78078642	None:intergenic	20.0%
!!!	TTTGTTTTGAATACTTTTTC+TGG	+	chr7_3:78078676-78078695	Msa1126520:intron	20.0%
!!	ACAAACATGTTATATTTGAA+AGG	+	chr7_3:78079003-78079022	Msa1126520:intron	20.0%
!!!	AAAGTGATTTTTAGTTTGTT+TGG	-	chr7_3:78079089-78079108	None:intergenic	20.0%
!!!	TTATTTTAATCCGTAACAAA+CGG	+	chr7_3:78079217-78079236	Msa1126520:intron	20.0%
!!	ACGTTTCTTAATTAAAAAGA+GGG	+	chr7_3:78079257-78079276	Msa1126520:intron	20.0%
!!	TGTCAACAAAAAAAAAAAAC+AGG	+	chr7_3:78079695-78079714	Msa1126520:intron	20.0%
!!	AAAAAAAAAAAACAGGTTTG+AGG	+	chr7_3:78079702-78079721	Msa1126520:intron	20.0%
!!!	GGACACTTTTTTTTAAAAAA+TGG	-	chr7_3:78080348-78080367	None:intergenic	20.0%
!!	AATTGGAGTTATATTGTATT+GGG	-	chr7_3:78080416-78080435	None:intergenic	20.0%
!!	TAATTGGAGTTATATTGTAT+TGG	-	chr7_3:78080417-78080436	None:intergenic	20.0%
!!	TATACATTAGTTAAAACGTA+TGG	+	chr7_3:78080611-78080630	Msa1126520:intron	20.0%
!!	CTAGTAAATGAAATGAATAT+AGG	+	chr7_3:78080851-78080870	Msa1126520:three_prime_UTR	20.0%
!!!	AACTTATGACTTTTTTGAAA+CGG	-	chr7_3:78080880-78080899	None:intergenic	20.0%
!!	TTTCAAAAAAGTCATAAGTT+GGG	+	chr7_3:78080880-78080899	Msa1126520:three_prime_UTR	20.0%
!	TAGTTTACAGAGTAAAGTAA+AGG	+	chr7_3:78076614-78076633	Msa1126520:intron	25.0%
!!	TATCAGACACTTATATTTTG+TGG	+	chr7_3:78076713-78076732	Msa1126520:intron	25.0%
!!	ACTTTTCTAATGAAAATGTC+TGG	+	chr7_3:78076913-78076932	Msa1126520:intron	25.0%
!!!	AATTATTACCATTGATTTGG+GGG	-	chr7_3:78077203-78077222	None:intergenic	25.0%
!!!	AAACAATTCAAAAAGCATCT+AGG	-	chr7_3:78077360-78077379	None:intergenic	25.0%
!!	ATTGTTTGTCCTTTTCTTTT+TGG	+	chr7_3:78077373-78077392	Msa1126520:intron	25.0%
!	TGTTATTATACTAGCAAGTT+TGG	-	chr7_3:78077544-78077563	None:intergenic	25.0%
!	TTATCTTATCATGATTCATG+AGG	+	chr7_3:78077640-78077659	Msa1126520:intron	25.0%
!	ACTATATGGTTTCTAAATCA+TGG	+	chr7_3:78077720-78077739	Msa1126520:intron	25.0%
!!	TTTTCTATCATAGATCAGAT+AGG	-	chr7_3:78077759-78077778	None:intergenic	25.0%
!	TAAAAAAAGCTGTAACAAAC+AGG	-	chr7_3:78078219-78078238	None:intergenic	25.0%
!	TGTGTATATATAGCAAAACA+AGG	-	chr7_3:78078473-78078492	None:intergenic	25.0%
!	GAAAAAAATTGTGTCCTTTA+TGG	+	chr7_3:78079025-78079044	Msa1126520:intron	25.0%
!!!	TATTTTAATCCGTAACAAAC+GGG	+	chr7_3:78079218-78079237	Msa1126520:intron	25.0%
!	CACGTTTCTTAATTAAAAAG+AGG	+	chr7_3:78079256-78079275	Msa1126520:intron	25.0%
!	CTCTATGATAACATAGTTTA+TGG	+	chr7_3:78079899-78079918	Msa1126520:intron	25.0%
!!!	TTTTTTTTTGTTGCAGATTC+AGG	+	chr7_3:78080100-78080119	Msa1126520:intron	25.0%
!	AAAATAGACAAAATTCCTTG+AGG	-	chr7_3:78080164-78080183	None:intergenic	25.0%
!!!	TGAAATGACTCAGTTATTTT+GGG	-	chr7_3:78080369-78080388	None:intergenic	25.0%
!!	TTGAAATGACTCAGTTATTT+TGG	-	chr7_3:78080370-78080389	None:intergenic	25.0%
!	ATAGTGCATATTGCAAAAAT+TGG	+	chr7_3:78080652-78080671	Msa1126520:intron	25.0%
!!!	ATTGGACATGTATTTTGAAA+CGG	+	chr7_3:78080670-78080689	Msa1126520:intron	25.0%
!!	CATTTACTAGATTTTCTTCT+AGG	-	chr7_3:78080841-78080860	None:intergenic	25.0%
!	GTTTCAAAAAAGTCATAAGT+TGG	+	chr7_3:78080879-78080898	Msa1126520:three_prime_UTR	25.0%
!!!	TATTTTTTTGGCATGCTAAT+TGG	+	chr7_3:78080947-78080966	Msa1126520:three_prime_UTR	25.0%
!	CTTATTATTAGGGTTTCTAG+GGG	-	chr7_3:78076214-78076233	None:intergenic	30.0%
	GCTTATTATTAGGGTTTCTA+GGG	-	chr7_3:78076215-78076234	None:intergenic	30.0%
	AGCTTATTATTAGGGTTTCT+AGG	-	chr7_3:78076216-78076235	None:intergenic	30.0%
!	TTAGGATTTTATTATACCCG+AGG	-	chr7_3:78076251-78076270	None:intergenic	30.0%
	ATCTGAAAATCAACTGTATC+TGG	-	chr7_3:78076689-78076708	None:intergenic	30.0%
!	AAGTTTACCTTTTGTATCCA+AGG	-	chr7_3:78076897-78076916	None:intergenic	30.0%
	GAAAATGGCATATATCTACA+AGG	+	chr7_3:78077072-78077091	Msa1126520:CDS	30.0%
!!	ATTATTACCATTGATTTGGG+GGG	-	chr7_3:78077202-78077221	None:intergenic	30.0%
	TGTTATCTTAATCTCGTGTT+TGG	+	chr7_3:78077269-78077288	Msa1126520:intron	30.0%
	TCGTGTTTGGATTAATTTCA+GGG	+	chr7_3:78077282-78077301	Msa1126520:intron	30.0%
	GTTTACCTCATATATTGCTT+GGG	-	chr7_3:78077332-78077351	None:intergenic	30.0%
	AGTTTACCTCATATATTGCT+TGG	-	chr7_3:78077333-78077352	None:intergenic	30.0%
!	CAAGCATTTTCTCATTTGAT+GGG	+	chr7_3:78077438-78077457	Msa1126520:intron	30.0%
!	AAGCATTTTCTCATTTGATG+GGG	+	chr7_3:78077439-78077458	Msa1126520:intron	30.0%
	AAATATGTAAGCACGTAAAC+AGG	-	chr7_3:78077485-78077504	None:intergenic	30.0%
	AAGAATTGATGTCTACATGA+AGG	-	chr7_3:78077591-78077610	None:intergenic	30.0%
	GTTGCCATAATGAAGAAATA+TGG	+	chr7_3:78078086-78078105	Msa1126520:intron	30.0%
	TAGCAAAACAAGGATTTGAT+TGG	-	chr7_3:78078463-78078482	None:intergenic	30.0%
	ATTAGAGAAGAACAACGATT+AGG	-	chr7_3:78078532-78078551	None:intergenic	30.0%
!	CATAATGGAATTGCTAACTA+AGG	-	chr7_3:78078577-78078596	None:intergenic	30.0%
	GAAACGTGATTGAATATGTA+GGG	-	chr7_3:78079244-78079263	None:intergenic	30.0%
	AGAAACGTGATTGAATATGT+AGG	-	chr7_3:78079245-78079264	None:intergenic	30.0%
	CTCTCGTATTTCTTCATTTA+TGG	+	chr7_3:78079552-78079571	Msa1126520:intron	30.0%
!	AAAAGACGTTTTTATCCCTT+CGG	-	chr7_3:78079836-78079855	None:intergenic	30.0%
!	ACTTTCTCTTGATGTTACTT+CGG	+	chr7_3:78080076-78080095	Msa1126520:intron	30.0%
	AAAAAATGGGTCAGATATTC+CGG	-	chr7_3:78080334-78080353	None:intergenic	30.0%
!!	CTTGGACATGTATTTTGAAA+CGG	-	chr7_3:78080449-78080468	None:intergenic	30.0%
!	AAAGTCATAAGTTGGGTAAA+CGG	+	chr7_3:78080887-78080906	Msa1126520:three_prime_UTR	30.0%
	CCGGGTTAAGCTTATTATTA+GGG	-	chr7_3:78076224-78076243	None:intergenic	35.0%
	CCCTAATAATAAGCTTAACC+CGG	+	chr7_3:78076221-78076240	Msa1126520:five_prime_UTR	35.0%
	CCTAATAATAAGCTTAACCC+GGG	+	chr7_3:78076222-78076241	Msa1126520:five_prime_UTR	35.0%
	AAAATCCTAAAATCGCCTGT+CGG	+	chr7_3:78076261-78076280	Msa1126520:five_prime_UTR	35.0%
	GAAAATCAACTGTATCTGGT+TGG	-	chr7_3:78076685-78076704	None:intergenic	35.0%
	TTTGTATTAGGCTTTACGTG+AGG	+	chr7_3:78076863-78076882	Msa1126520:intron	35.0%
	TTGTATTAGGCTTTACGTGA+GGG	+	chr7_3:78076864-78076883	Msa1126520:intron	35.0%
	GTACAATCCTTGGATACAAA+AGG	+	chr7_3:78076887-78076906	Msa1126520:CDS	35.0%
	AAATGTCTGGTTAGATGCTT+TGG	+	chr7_3:78076926-78076945	Msa1126520:intron	35.0%
!!	GGGAAGATTTGACTTGAATT+TGG	-	chr7_3:78077182-78077201	None:intergenic	35.0%
	CTCGTGTTTGGATTAATTTC+AGG	+	chr7_3:78077281-78077300	Msa1126520:intron	35.0%
	GTACATAAATACTCTTACGC+GGG	-	chr7_3:78077310-78077329	None:intergenic	35.0%
	GGTACATAAATACTCTTACG+CGG	-	chr7_3:78077311-78077330	None:intergenic	35.0%
	ATGTACCCAAGCAATATATG+AGG	+	chr7_3:78077324-78077343	Msa1126520:CDS	35.0%
	CGAAAGAAGCCAAAAAGAAA+AGG	-	chr7_3:78077385-78077404	None:intergenic	35.0%
	CCATCAAATGAGAAAATGCT+TGG	-	chr7_3:78077440-78077459	None:intergenic	35.0%
!	CCAAGCATTTTCTCATTTGA+TGG	+	chr7_3:78077437-78077456	Msa1126520:intron	35.0%
!!	TCTTATGCTCTAGAGTTATG+CGG	+	chr7_3:78077664-78077683	Msa1126520:intron	35.0%
!	AAAAGACGTTTTTACCCCTT+CGG	+	chr7_3:78077818-78077837	Msa1126520:intron	35.0%
	TAACTGCCGAATTATGAAAC+CGG	+	chr7_3:78077845-78077864	Msa1126520:intron	35.0%
	TTAACTACCGAGGAAAACTT+CGG	+	chr7_3:78077874-78077893	Msa1126520:intron	35.0%
	AACAGGCTCGTAGTAATTAT+AGG	-	chr7_3:78078202-78078221	None:intergenic	35.0%
	GAATTGCTAACTAAGGAAGA+GGG	-	chr7_3:78078570-78078589	None:intergenic	35.0%
!!	CTGTTATTGTTGGGTTTTGA+TGG	+	chr7_3:78078715-78078734	Msa1126520:intron	35.0%
!!	GGTTTTGATGGTAATTGTCT+GGG	+	chr7_3:78078727-78078746	Msa1126520:intron	35.0%
	CATCTGCAATCAGTAGTTAA+TGG	-	chr7_3:78079524-78079543	None:intergenic	35.0%
	CCAAGGAAATCTGAAAACTT+CGG	-	chr7_3:78079747-78079766	None:intergenic	35.0%
	TTAACTACCGAGGAAAACTT+CGG	-	chr7_3:78077874-78077893	None:intergenic	35.0%
	TAACTGCCGAATTATGAAAC+CGG	-	chr7_3:78077845-78077864	None:intergenic	35.0%
!!!	GATGATTTTTAGTAGCCTCA+AGG	+	chr7_3:78080146-78080165	Msa1126520:three_prime_UTR	35.0%
	GAACAGTCTAAACAGAAGAA+CGG	-	chr7_3:78080201-78080220	None:intergenic	35.0%
	CTGTTTAGACTGTTCTTTGA+TGG	+	chr7_3:78080206-78080225	Msa1126520:three_prime_UTR	35.0%
	AATGTTGTGTACTGCTGTAT+TGG	+	chr7_3:78080229-78080248	Msa1126520:three_prime_UTR	35.0%
	AAAAATGGGTCAGATATTCC+GGG	-	chr7_3:78080333-78080352	None:intergenic	35.0%
!!	GAAACGGAGGAAGTATTAAT+TGG	-	chr7_3:78080433-78080452	None:intergenic	35.0%
!!!	GACATGTATTTTGAAACGGA+GGG	+	chr7_3:78080674-78080693	Msa1126520:intron	35.0%
	ATCTGTGTGAAAAACCAAAC+TGG	+	chr7_3:78080763-78080782	Msa1126520:intron	35.0%
!	CCAAACTGGCTTAGATAAAA+CGG	+	chr7_3:78080777-78080796	Msa1126520:intron	35.0%
!	CAAACTGGCTTAGATAAAAC+GGG	+	chr7_3:78080778-78080797	Msa1126520:intron	35.0%
	CCCGGGTTAAGCTTATTATT+AGG	-	chr7_3:78076225-78076244	None:intergenic	40.0%
	TGTATTAGGCTTTACGTGAG+GGG	+	chr7_3:78076865-78076884	Msa1126520:intron	40.0%
!!	GTTTGGGTACTGGTTTACTT+TGG	-	chr7_3:78076990-78077009	None:intergenic	40.0%
	TTTGGACCAGAGATGTGTTT+GGG	-	chr7_3:78077006-78077025	None:intergenic	40.0%
	ATTTGGACCAGAGATGTGTT+TGG	-	chr7_3:78077007-78077026	None:intergenic	40.0%
	ACATCTCTGGTCCAAATTGA+AGG	+	chr7_3:78077010-78077029	Msa1126520:CDS	40.0%
	TGGTGTTCACTCCTTCAATT+TGG	-	chr7_3:78077024-78077043	None:intergenic	40.0%
	AATTGAAGGAGTGAACACCA+AGG	+	chr7_3:78077024-78077043	Msa1126520:CDS	40.0%
	TTGGTATGCTGGCAAGAAAA+TGG	+	chr7_3:78077057-78077076	Msa1126520:CDS	40.0%
	ACAATACCACTGTTACCATG+TGG	-	chr7_3:78077154-78077173	None:intergenic	40.0%
	AAATCTTCCCCCCAAATCAA+TGG	+	chr7_3:78077192-78077211	Msa1126520:CDS	40.0%
	AAATGCTTGGAAAACACGAG+AGG	-	chr7_3:78077427-78077446	None:intergenic	40.0%
	ACAGGTCAGAAGTTTCAAAC+AGG	-	chr7_3:78077467-78077486	None:intergenic	40.0%
!	TGCTGTTGACACATTAGCTT+TGG	+	chr7_3:78077780-78077799	Msa1126520:intron	40.0%
!!	TTGACACATTAGCTTTGGCT+AGG	+	chr7_3:78077785-78077804	Msa1126520:intron	40.0%
!	TTAACTGCCGAAGTTTTCCT+CGG	-	chr7_3:78079770-78079789	None:intergenic	40.0%
!	CCGAAGTTTTCAGATTTCCT+CGG	-	chr7_3:78079744-78079763	None:intergenic	40.0%
	CCGAGGAAATCTGAAAACTT+CGG	+	chr7_3:78077907-78077926	Msa1126520:intron	40.0%
!	AAACAGGTTTGAGGTTTCCT+CGG	-	chr7_3:78079711-78079730	None:intergenic	40.0%
	GGAATTGCTAACTAAGGAAG+AGG	-	chr7_3:78078571-78078590	None:intergenic	40.0%
	TCACTGTCGCTGTTATTGTT+GGG	+	chr7_3:78078706-78078725	Msa1126520:intron	40.0%
!!	GGGTTTTGATGGTAATTGTC+TGG	+	chr7_3:78078726-78078745	Msa1126520:intron	40.0%
	TGTCTTATACTGCCATAGCT+TGG	+	chr7_3:78078750-78078769	Msa1126520:intron	40.0%
	GTCTTATACTGCCATAGCTT+GGG	+	chr7_3:78078751-78078770	Msa1126520:intron	40.0%
	TCTTATACTGCCATAGCTTG+GGG	+	chr7_3:78078752-78078771	Msa1126520:intron	40.0%
!	AAACAGGTTTGAGGTTTCCT+CGG	+	chr7_3:78079711-78079730	Msa1126520:intron	40.0%
!	CCGAAGTTTTCAGATTTCCT+TGG	+	chr7_3:78079744-78079763	Msa1126520:intron	40.0%
!	TTAACTGCCGAAGTTTTCCT+CGG	+	chr7_3:78079770-78079789	Msa1126520:intron	40.0%
!	CTGTAGCCGGTTTCATAATT+CGG	+	chr7_3:78079800-78079819	Msa1126520:intron	40.0%
!!	TTGACACATTAGCTTTGGCT+AGG	-	chr7_3:78077785-78077804	None:intergenic	40.0%
!	TGCTGTTGACACATTAGCTT+TGG	-	chr7_3:78077780-78077799	None:intergenic	40.0%
	TATAAATAGGGCCTCTTCTC+TGG	+	chr7_3:78080025-78080044	Msa1126520:intron	40.0%
	TGTTGCAGATTCAGGTGATT+AGG	+	chr7_3:78080108-78080127	Msa1126520:intron	40.0%
	TGATTAGGTCAGTAGAGTTG+CGG	+	chr7_3:78080123-78080142	Msa1126520:three_prime_UTR	40.0%
!	GTGGACTTGGTTATCTCATA+TGG	+	chr7_3:78080286-78080305	Msa1126520:three_prime_UTR	40.0%
!!!	GGACATGTATTTTGAAACGG+AGG	-	chr7_3:78080673-78080692	None:intergenic	40.0%
	CATATGTGAAGTGGTTGACT+TGG	-	chr7_3:78080467-78080486	None:intergenic	40.0%
	TAACGGTCAAAATCGTGCAT+TGG	-	chr7_3:78080490-78080509	None:intergenic	40.0%
!!!	GGACATGTATTTTGAAACGG+AGG	+	chr7_3:78080673-78080692	Msa1126520:intron	40.0%
!	CCGTTTTATCTAAGCCAGTT+TGG	-	chr7_3:78080780-78080799	None:intergenic	40.0%
!	GTTTCTAGGGGTTCACACTT+TGG	-	chr7_3:78076202-78076221	None:intergenic	45.0%
	TTATTATACCCGAGGCTTCC+CGG	-	chr7_3:78076243-78076262	None:intergenic	45.0%
	ATACCAAGCTACCTCTTCCT+TGG	-	chr7_3:78077044-78077063	None:intergenic	45.0%
	GGCATATATCTACAAGGCCA+AGG	+	chr7_3:78077078-78077097	Msa1126520:CDS	45.0%
	AAGGCCAAGGTGAAGAAGAA+TGG	+	chr7_3:78077091-78077110	Msa1126520:CDS	45.0%
	GGTTCCATTCTTCTTCACCT+TGG	-	chr7_3:78077098-78077117	None:intergenic	45.0%
	AACCCATTACCGCTGCATAT+GGG	+	chr7_3:78077114-78077133	Msa1126520:CDS	45.0%
	TTCGGCAGTTAACTACCGAA+GGG	-	chr7_3:78079818-78079837	None:intergenic	45.0%
	ATTCGGCAGTTAACTACCGA+AGG	-	chr7_3:78079817-78079836	None:intergenic	45.0%
!	CTGCAGCCGGTTTCATAATT+CGG	-	chr7_3:78077854-78077873	None:intergenic	45.0%
	GTCACTGTCGCTGTTATTGT+TGG	+	chr7_3:78078705-78078724	Msa1126520:intron	45.0%
!	TATGTAGGGCCCGTTTGTTA+CGG	-	chr7_3:78079230-78079249	None:intergenic	45.0%
	ATTCGGCAGTTAACTACCGA+AGG	+	chr7_3:78079817-78079836	Msa1126520:intron	45.0%
	TTCGGCAGTTAACTACCGAA+GGG	+	chr7_3:78079818-78079837	Msa1126520:intron	45.0%
	GATTAGGTCAGTAGAGTTGC+GGG	+	chr7_3:78080124-78080143	Msa1126520:three_prime_UTR	45.0%
	GATAACCAAGTCCACACACA+TGG	-	chr7_3:78080281-78080300	None:intergenic	45.0%
!	GTGCATTGGCATATGTGAAG+TGG	-	chr7_3:78080476-78080495	None:intergenic	45.0%
	CTGGCTTAGATAAAACGGGA+CGG	+	chr7_3:78080782-78080801	Msa1126520:intron	45.0%
	CTTAGATAAAACGGGACGGA+GGG	+	chr7_3:78080786-78080805	Msa1126520:intron	45.0%
!!	TAAAGAATTAAATTTAAATA+AGG	-	chr7_3:78078012-78078031	None:intergenic	5.0%
!!!	TTAATTCTTTAATTATTTTA+AGG	+	chr7_3:78078021-78078040	Msa1126520:intron	5.0%
!!	AACATAAAAAAATATAATAA+CGG	-	chr7_3:78078649-78078668	None:intergenic	5.0%
!!!	CATAAAAAAAATAATTTTTT+TGG	+	chr7_3:78078980-78078999	Msa1126520:intron	5.0%
!!	TAAAGAATTAAATTTAATTA+AGG	+	chr7_3:78079633-78079652	Msa1126520:intron	5.0%
!!!	GTTAAATTTAAATATTTTTT+TGG	+	chr7_3:78080935-78080954	Msa1126520:three_prime_UTR	5.0%
	TATTATACCCGAGGCTTCCC+GGG	-	chr7_3:78076242-78076261	None:intergenic	50.0%
!	CAGAACCGACAGGCGATTTT+AGG	-	chr7_3:78076269-78076288	None:intergenic	50.0%
!!	CGTTTGAGTTGCCGTGAAGA+TGG	+	chr7_3:78076313-78076332	Msa1126520:exon	50.0%
	AGTTGCCGTGAAGATGGTGA+AGG	+	chr7_3:78076319-78076338	Msa1126520:exon	50.0%
	GTTGCCGTGAAGATGGTGAA+GGG	+	chr7_3:78076320-78076339	Msa1126520:exon	50.0%
	ACGTCCCTTCACCATCTTCA+CGG	-	chr7_3:78076327-78076346	None:intergenic	50.0%
	AAGATGGTGAAGGGACGTCA+AGG	+	chr7_3:78076329-78076348	Msa1126520:exon	50.0%
!	TACGTGAGGGGTACAATCCT+TGG	+	chr7_3:78076877-78076896	Msa1126520:CDS	50.0%
	CCAGAGATGTGTTTGGGTAC+TGG	-	chr7_3:78077000-78077019	None:intergenic	50.0%
	CCAGTACCCAAACACATCTC+TGG	+	chr7_3:78076997-78077016	Msa1126520:CDS	50.0%
	AGGAGTGAACACCAAGGAAG+AGG	+	chr7_3:78077030-78077049	Msa1126520:CDS	50.0%
	ACACCAAGGAAGAGGTAGCT+TGG	+	chr7_3:78077038-78077057	Msa1126520:CDS	50.0%
	GAAGAGGTAGCTTGGTATGC+TGG	+	chr7_3:78077046-78077065	Msa1126520:CDS	50.0%
	GAACCCATTACCGCTGCATA+TGG	+	chr7_3:78077113-78077132	Msa1126520:CDS	50.0%
	ACCCATTACCGCTGCATATG+GGG	+	chr7_3:78077115-78077134	Msa1126520:CDS	50.0%
	TAACCTTGCCCCATATGCAG+CGG	-	chr7_3:78077126-78077145	None:intergenic	50.0%
	GCATATGGGGCAAGGTTACA+AGG	+	chr7_3:78077128-78077147	Msa1126520:CDS	50.0%
	ACAAGGCCACATGGTAACAG+TGG	+	chr7_3:78077145-78077164	Msa1126520:CDS	50.0%
	TCGGCAGTTAACTACCGAAG+GGG	-	chr7_3:78079819-78079838	None:intergenic	50.0%
	ACTTCGGCAGTTAACTGCCA+AGG	-	chr7_3:78079764-78079783	None:intergenic	50.0%
	CCTCGGTAGTTAACTGTAGC+CGG	+	chr7_3:78079787-78079806	Msa1126520:intron	50.0%
	TACAGTCAGCACCATGTGTG+TGG	+	chr7_3:78080267-78080286	Msa1126520:three_prime_UTR	50.0%
	ATGGGTCAGATATTCCGGGA+CGG	-	chr7_3:78080329-78080348	None:intergenic	50.0%
	GCTTAGATAAAACGGGACGG+AGG	+	chr7_3:78080785-78080804	Msa1126520:intron	50.0%
	AAGCTTAACCCGGGAAGCCT+CGG	+	chr7_3:78076231-78076250	Msa1126520:five_prime_UTR	55.0%
	CCAACACTCTCAGAACCGAC+AGG	-	chr7_3:78076279-78076298	None:intergenic	55.0%
!!	CCTGTCGGTTCTGAGAGTGT+TGG	+	chr7_3:78076276-78076295	Msa1126520:five_prime_UTR	55.0%
	ACGGCAACTCAAACGCAGGA+TGG	-	chr7_3:78076308-78076327	None:intergenic	55.0%
	CTTCACGGCAACTCAAACGC+AGG	-	chr7_3:78076312-78076331	None:intergenic	55.0%
	GCCCCATATGCAGCGGTAAT+GGG	-	chr7_3:78077119-78077138	None:intergenic	55.0%
	TGCCCCATATGCAGCGGTAA+TGG	-	chr7_3:78077120-78077139	None:intergenic	55.0%
	TTACCGCTGCATATGGGGCA+AGG	+	chr7_3:78077120-78077139	Msa1126520:CDS	55.0%
	GGCAAGGTTACAAGGCCACA+TGG	+	chr7_3:78077136-78077155	Msa1126520:CDS	55.0%
	CCTCGGTAGTTAACTGCAGC+CGG	-	chr7_3:78077867-78077886	None:intergenic	55.0%
	ACTTCGGCAGTTAACTGCCG+AGG	+	chr7_3:78077890-78077909	Msa1126520:intron	55.0%
	ACTTCGGCAGTTAACTGCCG+AGG	+	chr7_3:78077890-78077909	Msa1126520:intron	55.0%
	TGCCATAGCTTGGGGCTTGA+GGG	+	chr7_3:78078760-78078779	Msa1126520:intron	55.0%
	TACCCTCAAGCCCCAAGCTA+TGG	-	chr7_3:78078765-78078784	None:intergenic	55.0%
	ACTTCGGCAGTTAACTGCCG+AGG	-	chr7_3:78077890-78077909	None:intergenic	55.0%
	CCGGCTACAGTTAACTACCG+AGG	-	chr7_3:78079790-78079809	None:intergenic	55.0%
!	GTGCTGCTAGACCAGAGAAG+AGG	-	chr7_3:78080039-78080058	None:intergenic	55.0%
	CAGCACCATGTGTGTGGACT+TGG	+	chr7_3:78080273-78080292	Msa1126520:three_prime_UTR	55.0%
	GTCAGATATTCCGGGACGGA+GGG	-	chr7_3:78080325-78080344	None:intergenic	55.0%
	AGCTTAACCCGGGAAGCCTC+GGG	+	chr7_3:78076232-78076251	Msa1126520:five_prime_UTR	60.0%
!	GACGTCAAGGAGAGCGTGTC+AGG	+	chr7_3:78076342-78076361	Msa1126520:CDS	60.0%
	CCGGCTGCAGTTAACTACCG+AGG	+	chr7_3:78077864-78077883	Msa1126520:intron	60.0%
	CTGCCATAGCTTGGGGCTTG+AGG	+	chr7_3:78078759-78078778	Msa1126520:intron	60.0%
	CTCTGGTCTAGCAGCACGCA+TGG	+	chr7_3:78080042-78080061	Msa1126520:intron	60.0%
!	TCGTGTTACTCCCTCCGTCC+CGG	+	chr7_3:78080312-78080331	Msa1126520:intron	60.0%
	GGTCAGATATTCCGGGACGG+AGG	-	chr7_3:78080326-78080345	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_3	gene	78076177	78080975	78076177	ID=Msa1126520;Name=Msa1126520
chr7_3	mRNA	78076177	78080975	78076177	ID=Msa1126520-mRNA-1;Parent=Msa1126520;Name=Msa1126520-mRNA-1;_AED=0.31;_eAED=0.31;_QI=155\|1\|1\|1\|0.6\|0.5\|6\|366\|112
chr7_3	exon	78076177	78076363	78076177	ID=Msa1126520-mRNA-1:exon:21665;Parent=Msa1126520-mRNA-1
chr7_3	exon	78076873	78076908	78076873	ID=Msa1126520-mRNA-1:exon:21666;Parent=Msa1126520-mRNA-1
chr7_3	exon	78076985	78077213	78076985	ID=Msa1126520-mRNA-1:exon:21667;Parent=Msa1126520-mRNA-1
chr7_3	exon	78077303	78077345	78077303	ID=Msa1126520-mRNA-1:exon:21668;Parent=Msa1126520-mRNA-1
chr7_3	exon	78080116	78080315	78080116	ID=Msa1126520-mRNA-1:exon:21669;Parent=Msa1126520-mRNA-1
chr7_3	exon	78080811	78080975	78080811	ID=Msa1126520-mRNA-1:exon:21670;Parent=Msa1126520-mRNA-1
chr7_3	five_prime_UTR	78076177	78076331	78076177	ID=Msa1126520-mRNA-1:five_prime_utr;Parent=Msa1126520-mRNA-1
chr7_3	CDS	78076332	78076363	78076332	ID=Msa1126520-mRNA-1:cds;Parent=Msa1126520-mRNA-1
chr7_3	CDS	78076873	78076908	78076873	ID=Msa1126520-mRNA-1:cds;Parent=Msa1126520-mRNA-1
chr7_3	CDS	78076985	78077213	78076985	ID=Msa1126520-mRNA-1:cds;Parent=Msa1126520-mRNA-1
chr7_3	CDS	78077303	78077344	78077303	ID=Msa1126520-mRNA-1:cds;Parent=Msa1126520-mRNA-1
chr7_3	three_prime_UTR	78077345	78077345	78077345	ID=Msa1126520-mRNA-1:three_prime_utr;Parent=Msa1126520-mRNA-1
chr7_3	three_prime_UTR	78080116	78080315	78080116	ID=Msa1126520-mRNA-1:three_prime_utr;Parent=Msa1126520-mRNA-1
chr7_3	three_prime_UTR	78080811	78080975	78080811	ID=Msa1126520-mRNA-1:three_prime_utr;Parent=Msa1126520-mRNA-1

Gene Sequence	>Msa1126520 ATGGTGAAGGGACGTCAAGGAGAGCGTGTCAGGCTTTACGTGAGGGGTACAATCCTTGGATACAAAAGATCCAAAGTAAACCAGTACCCAAACACATCTCTGGTCCAAATTGAAGGAGTGAACACCAAGGAAGAGGTAGCTTGGTATGCTGGCAAGAAAATGGCATATATCTACAAGGCCAAGGTGAAGAAGAATGGAACCCATTACCGCTGCATATGGGGCAAGGTTACAAGGCCACATGGTAACAGTGGTATTGTTCGTGCCAAATTCAAGTCAAATCTTCCCCCCAAATCAATGGGTTCCCGCGTAAGAGTATTTATGTACCCAAGCAATATATGA
Protein sequence	>Msa1126520 MVKGRQGERVRLYVRGTILGYKRSKVNQYPNTSLVQIEGVNTKEEVAWYAGKKMAYIYKAKVKKNGTHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGSRVRVFMYPSNI*