AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1159300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1159300 MtrunA17_Chr7g0254331 95.125 800 38 1 1 800 1 799 0.0 1504
Msa1159300 MtrunA17_Chr6g0478341 31.751 337 188 9 30 325 48 383 5.99e-38 149
Msa1159300 MtrunA17_Chr6g0478341 51.667 60 27 1 252 311 385 442 7.00e-16 81.6
Msa1159300 MtrunA17_Chr6g0478341 44.286 70 27 1 257 314 421 490 6.89e-13 72.0
Msa1159300 MtrunA17_Chr7g0272741 34.155 284 139 9 79 316 126 407 4.39e-36 146
Msa1159300 MtrunA17_Chr1g0161121 24.789 355 201 9 27 316 11 364 5.22e-33 134
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1159300 AT5G17790.1 45.166 755 275 23 82 792 93 752 0.0 556
Msa1159300 AT1G55040.1 35.833 240 119 6 111 321 204 437 2.03e-35 145
Msa1159300 AT1G48570.1 29.610 385 186 15 26 334 14 389 5.24e-28 118
Msa1159300 AT1G48570.1 56.716 67 29 0 252 318 373 439 2.02e-19 92.4
Msa1159300 AT1G70650.1 25.574 305 150 7 79 315 44 339 1.40e-27 117
Msa1159300 AT1G70650.2 25.574 305 150 7 79 315 44 339 4.64e-27 117

Find 230 sgRNAs with CRISPR-Local

Find 426 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCAGAAATATCCTTAATT+TGG 0.135919 7_4:-48912406 None:intergenic
TTACGCATTGGCATCATTTC+AGG 0.187358 7_4:-48911855 None:intergenic
CCCAGATTACTTTGCCAAAA+AGG 0.192927 7_4:+48912001 Msa1159300:CDS
TTCCTTAACGGCATTATTTC+CGG 0.203024 7_4:-48911342 None:intergenic
TAGATTATAATTCCATTTCT+AGG 0.208659 7_4:-48912861 None:intergenic
CCGTCGTGTTGCCCAAATTA+AGG 0.248127 7_4:+48912394 Msa1159300:CDS
ATTTGTTGTTAGCAAGAAAA+AGG 0.255921 7_4:+48911890 Msa1159300:CDS
GGACTCTGATAAAGCAAATA+TGG 0.287841 7_4:+48910457 Msa1159300:CDS
GCTTGAAAAGTTCACCAAAT+AGG 0.289027 7_4:-48910583 None:intergenic
GATATTGCACTTGTTATATC+TGG 0.297268 7_4:-48911819 None:intergenic
CTATTAACTCCTTTCCTTAA+CGG 0.298170 7_4:-48911354 None:intergenic
TTTCCATCATATGCCAGTTC+TGG 0.308128 7_4:+48911672 Msa1159300:CDS
TCCTCCATCAGAAACCTATT+TGG 0.311441 7_4:+48910569 Msa1159300:CDS
GATAGAAAACATGAAAATAT+TGG 0.313880 7_4:-48912833 None:intergenic
GCGGCCTGGACAAATATCTT+TGG 0.332575 7_4:+48911146 Msa1159300:CDS
GAAGTTGAGGACTATAAAAC+TGG 0.335316 7_4:+48911465 Msa1159300:CDS
GAATTATAATCTAGTTTCTA+TGG 0.338478 7_4:+48912871 Msa1159300:three_prime_UTR
TCATTGGTCCTAGGAAAATA+TGG 0.345084 7_4:+48907606 Msa1159300:five_prime_UTR
TTCTATCTTGATCCTAGAAA+TGG 0.345139 7_4:+48912849 Msa1159300:three_prime_UTR
CTCAGAAATATCCTTAATTT+GGG 0.345174 7_4:-48912405 None:intergenic
ATCTGATCAGAAGGAGGTCC+TGG 0.356751 7_4:-48912137 None:intergenic
TTGAAATGAAAAGGGGTGAT+TGG 0.359169 7_4:+48910702 Msa1159300:CDS
TGTGAATGTGTTGTTGTTGT+TGG 0.359907 7_4:-48907864 None:intergenic
CCCTTTGATTGATTTCATAT+TGG 0.360934 7_4:+48912762 Msa1159300:three_prime_UTR
GGAGGTCCTGGACTCTGTTC+AGG 0.361319 7_4:-48912125 None:intergenic
CAATAATGCCTATGCGTAAA+GGG 0.362210 7_4:+48912459 Msa1159300:CDS
GTGAAGAAGCAAGGCCAAAA+AGG 0.372468 7_4:+48910956 Msa1159300:CDS
TTCCGGAAATAATGCCGTTA+AGG 0.373924 7_4:+48911340 Msa1159300:CDS
GAGAGAAATCTGGAAAATTC+TGG 0.376636 7_4:-48907931 None:intergenic
GATACTCTGGACGACATTCT+AGG 0.385372 7_4:+48911507 Msa1159300:CDS
CCTCTCTGCCTTTGCCTCCT+CGG 0.388207 7_4:-48912366 None:intergenic
GATGAACTCTCGGTCAGATT+TGG 0.390607 7_4:-48912245 None:intergenic
TGTTGTTCCCTTTCACGTCT+TGG 0.393101 7_4:-48911632 None:intergenic
CGGCCTGGACAAATATCTTT+GGG 0.398174 7_4:+48911147 Msa1159300:CDS
GACAAAACATTGAAATGAAA+AGG 0.402732 7_4:+48910693 Msa1159300:CDS
CTATGGTCGACTTGTTAAGT+AGG 0.406316 7_4:+48912888 Msa1159300:three_prime_UTR
ACAGGATCTGAGCTCACAAC+TGG 0.410741 7_4:-48912560 None:intergenic
GATTCAATTCAATATCTCAT+TGG 0.413664 7_4:+48907590 Msa1159300:five_prime_UTR
CCCTGGATGTGATGTGGTAT+TGG 0.414060 7_4:-48911175 None:intergenic
TGAATTGAATCAATTTAAAC+CGG 0.416617 7_4:-48907578 None:intergenic
GACATTCTAGGTCGTTCAAC+TGG 0.418769 7_4:+48911519 Msa1159300:CDS
GGAGGAAGAAGATGAACCTT+GGG 0.419366 7_4:-48907705 None:intergenic
TGGATGGTGGGTCCCAGTGA+GGG 0.420551 7_4:-48907905 None:intergenic
GAGGCTTTGAGTTTGAGTTT+TGG 0.424888 7_4:-48907832 None:intergenic
GAGATAGACCTAACCTTCTC+AGG 0.427165 7_4:+48908052 Msa1159300:CDS
TTTACCAGCAATTATACAAA+AGG 0.429619 7_4:+48912643 Msa1159300:three_prime_UTR
TGCACTGAATCAAAAGAGTT+GGG 0.431070 7_4:-48910626 None:intergenic
TTCTTCACTTCATCCTCCTC+CGG 0.435059 7_4:+48907559 Msa1159300:five_prime_UTR
GTTTAGAGGGATCAGCGGTC+AGG 0.435485 7_4:+48912321 Msa1159300:CDS
GGGATCAGCGGTCAGGGAAC+CGG 0.437067 7_4:+48912328 Msa1159300:CDS
GAAAGGAGAAAGAGGGAGAG+AGG 0.442471 7_4:-48907744 None:intergenic
GGTCAGGGAACCGGATCCTT+TGG 0.443328 7_4:+48912337 Msa1159300:CDS
GCTCAATACAAGAGAAGCTT+GGG 0.444015 7_4:+48911426 Msa1159300:CDS
GGAGATGTGTGAGAGAAATC+TGG 0.445834 7_4:-48907941 None:intergenic
CCAATATGAAATCAATCAAA+GGG 0.447824 7_4:-48912762 None:intergenic
TTGCACTGAATCAAAAGAGT+TGG 0.448066 7_4:-48910627 None:intergenic
GAAACAAACCTGAGAAGGTT+AGG 0.449010 7_4:-48908060 None:intergenic
GAGGGGAGATTGTGAAGGTT+GGG 0.449597 7_4:-48907887 None:intergenic
GATTGATTTCATATTGGAGA+TGG 0.452218 7_4:+48912768 Msa1159300:three_prime_UTR
ACAAAACATTGAAATGAAAA+GGG 0.453499 7_4:+48910694 Msa1159300:CDS
ACTGTCAGTGTCACCAGAAC+TGG 0.456993 7_4:-48911685 None:intergenic
AAGAAAAGAGAGTGCGGTGG+TGG 0.457611 7_4:-48907771 None:intergenic
CGGTGTGATTGCAAGCGGCC+TGG 0.461676 7_4:+48911132 Msa1159300:CDS
AGAAAGAGGGAGAGAGGAGA+CGG 0.463077 7_4:-48907738 None:intergenic
AACTGGCATATGATGGAAAA+GGG 0.463133 7_4:-48911668 None:intergenic
GGGAGGAAAACCATCGGCGG+GGG 0.465893 7_4:-48907980 None:intergenic
GAACTGGCATATGATGGAAA+AGG 0.466654 7_4:-48911669 None:intergenic
CCTTCACAATCTCCCCTCAC+TGG 0.468452 7_4:+48907892 Msa1159300:CDS
ATTGAAGGAAAATCTTCGTC+TGG 0.470173 7_4:-48912440 None:intergenic
GAAGATGAACCTTGGGGAGG+CGG 0.470465 7_4:-48907698 None:intergenic
TCAATAATGCCTATGCGTAA+AGG 0.470741 7_4:+48912458 Msa1159300:CDS
AGTGTTGGAACAGAATGGTC+AGG 0.471195 7_4:+48912293 Msa1159300:CDS
CACATTTCCAAGACGTGAAA+GGG 0.471565 7_4:+48911625 Msa1159300:CDS
ATTGATTTCATATTGGAGAT+GGG 0.474580 7_4:+48912769 Msa1159300:three_prime_UTR
ACCATTCTGTTCCAACACTC+TGG 0.475255 7_4:-48912289 None:intergenic
TACGCATTGGCATCATTTCA+GGG 0.476436 7_4:-48911854 None:intergenic
TTCAGCCTGCGGCAATTCGC+CGG 0.479711 7_4:-48908004 None:intergenic
TCACAACTGGAAGATTTCTT+CGG 0.480004 7_4:-48912547 None:intergenic
ACCAATACCACATCACATCC+AGG 0.486464 7_4:+48911174 Msa1159300:CDS
TGCTCAATACAAGAGAAGCT+TGG 0.486677 7_4:+48911425 Msa1159300:CDS
GGCAACTGACTGGAGGAGAA+TGG 0.487351 7_4:+48910977 Msa1159300:CDS
ACCAAATAGGTTTCTGATGG+AGG 0.488991 7_4:-48910570 None:intergenic
GTTTATGTTCTCCGACTCGC+AGG 0.489402 7_4:+48908209 Msa1159300:CDS
TTCAAGTGAAAATGTCATCA+AGG 0.490105 7_4:+48911728 Msa1159300:CDS
TTCAGATATTGATGCTAGGT+TGG 0.491453 7_4:+48911224 Msa1159300:CDS
GAATGTGTTGTTGTTGTTGG+TGG 0.491901 7_4:-48907861 None:intergenic
GCTTCTCTTGTATTGAGCAT+TGG 0.492874 7_4:-48911421 None:intergenic
TCCAATATGAAATCAATCAA+AGG 0.495744 7_4:-48912763 None:intergenic
GATCAGAGACGTTGCCGTTG+TGG 0.495844 7_4:+48908170 Msa1159300:CDS
ATGGATGGTGGGTCCCAGTG+AGG 0.496014 7_4:-48907906 None:intergenic
TTCACCAAATAGGTTTCTGA+TGG 0.498647 7_4:-48910573 None:intergenic
GGATAGAAAAGACTTCATCT+TGG 0.498656 7_4:-48908241 None:intergenic
AAGCAGTGGAAATTCAAGTC+AGG 0.499382 7_4:+48912202 Msa1159300:CDS
AGCCAAGTCTCGTGATACTC+TGG 0.500292 7_4:+48911494 Msa1159300:CDS
GCAACTGACTGGAGGAGAAT+GGG 0.501796 7_4:+48910978 Msa1159300:CDS
GCCAAACGTCTCTTATATGC+TGG 0.505054 7_4:-48911930 None:intergenic
GTGAGAGAAGAAGAAGAAGT+AGG 0.506396 7_4:-48907808 None:intergenic
TCCCACCGGCGAATTGCCGC+AGG 0.507515 7_4:+48907999 Msa1159300:CDS
AGTGCGGTGGTGGAAATGAA+AGG 0.509015 7_4:-48907761 None:intergenic
TTCAATATCTCATTGGTCCT+AGG 0.509117 7_4:+48907597 Msa1159300:five_prime_UTR
GAATCAAAAGAGTTGGGTCC+AGG 0.510866 7_4:-48910620 None:intergenic
CTTATATGCTGGTGTTGTCA+AGG 0.513833 7_4:-48911919 None:intergenic
TGCGAGTCGGAGAACATAAA+CGG 0.516634 7_4:-48908207 None:intergenic
GAATCAATTTAAACCGGAGG+AGG 0.516920 7_4:-48907572 None:intergenic
CGGAGGAAGAAGATGAACCT+TGG 0.517525 7_4:-48907706 None:intergenic
CTCTCACACATCTCCTCCGC+CGG 0.517890 7_4:+48907949 Msa1159300:CDS
GTGGAAATGAAAGGAGAAAG+AGG 0.519241 7_4:-48907752 None:intergenic
CAATATCTGAAGTATTAGAA+TGG 0.519472 7_4:-48911212 None:intergenic
CTTCACAATCTCCCCTCACT+GGG 0.520997 7_4:+48907893 Msa1159300:CDS
AAAATTCTGGCCATGGATGG+TGG 0.521026 7_4:-48907918 None:intergenic
TGATCTATCTCATCCTCCTC+CGG 0.523117 7_4:+48907660 Msa1159300:five_prime_UTR
GTGGGAGGAAAACCATCGGC+GGG 0.523503 7_4:-48907982 None:intergenic
GAACCCAAAGATATTTGTCC+AGG 0.524396 7_4:-48911150 None:intergenic
TGAGGGGAGATTGTGAAGGT+TGG 0.524706 7_4:-48907888 None:intergenic
TTATTTATCTATCTTTGTTG+AGG 0.527136 7_4:+48912738 Msa1159300:three_prime_UTR
TTACGCATAGGCATTATTGA+AGG 0.527364 7_4:-48912455 None:intergenic
AGCCTGCGGCAATTCGCCGG+TGG 0.529196 7_4:-48908001 None:intergenic
TCACCAGAACTGGCATATGA+TGG 0.530430 7_4:-48911675 None:intergenic
ACTTATGCGGCTTCAAGCAG+TGG 0.530927 7_4:+48912188 Msa1159300:CDS
GGAGGAATGTAGCTTGCTTA+CGG 0.533335 7_4:+48911112 Msa1159300:CDS
CGTTTGGCCATGGAGCAATC+TGG 0.534177 7_4:+48911945 Msa1159300:CDS
TGGTTTACATTTCCATACCC+TGG 0.534908 7_4:-48911192 None:intergenic
ACCAGCATATAAGAGACGTT+TGG 0.535648 7_4:+48911929 Msa1159300:CDS
ACCACATCACATCCAGGGTA+TGG 0.536955 7_4:+48911180 Msa1159300:CDS
ATAGATTTGTTGTAAGCATG+AGG 0.537578 7_4:+48911373 Msa1159300:CDS
TAACGACGCTCCCGAAGTTG+AGG 0.538314 7_4:+48911452 Msa1159300:CDS
AATCTGGAAAATTCTGGCCA+TGG 0.538494 7_4:-48907925 None:intergenic
ATTTGCTTTATCAGAGTCCA+AGG 0.538585 7_4:-48910453 None:intergenic
ATGGTCAGGGAAAAGTTTAG+AGG 0.539489 7_4:+48912307 Msa1159300:CDS
AGATATTGATGCTAGGTTGG+TGG 0.542575 7_4:+48911227 Msa1159300:CDS
TCACTGGGACCCACCATCCA+TGG 0.542657 7_4:+48907908 Msa1159300:CDS
TCGGACATATCCAAAGGATC+CGG 0.542933 7_4:-48912347 None:intergenic
GGGGTGATTGGATTTGCCTA+AGG 0.543193 7_4:+48910714 Msa1159300:CDS
GGATGGTGGGTCCCAGTGAG+GGG 0.545306 7_4:-48907904 None:intergenic
TTGTTGTTGGTGGTGTTGTG+AGG 0.548084 7_4:-48907851 None:intergenic
GATGTATTGCTAGCAATTGA+CGG 0.549547 7_4:-48911603 None:intergenic
GGATATGTCCGAGGAGGCAA+AGG 0.549802 7_4:+48912358 Msa1159300:CDS
TCATATTGGTTCTACTTATG+CGG 0.551263 7_4:+48912175 Msa1159300:CDS
GAAATAATGCCGTTAAGGAA+AGG 0.552070 7_4:+48911345 Msa1159300:CDS
ATGCTGGTGTTGTCAAGGAC+CGG 0.555358 7_4:-48911914 None:intergenic
TTACTTGAGATCTGATCAGA+AGG 0.556039 7_4:-48912146 None:intergenic
AAGCATGAGGAAAACTCCAC+TGG 0.556439 7_4:+48911386 Msa1159300:CDS
ATACTTCAGATATTGATGCT+AGG 0.557119 7_4:+48911220 Msa1159300:CDS
GGTGGGAGGAAAACCATCGG+CGG 0.557256 7_4:-48907983 None:intergenic
TTTAGAGGGATCAGCGGTCA+GGG 0.557816 7_4:+48912322 Msa1159300:CDS
GAGAGAGGAGACGGATATTG+TGG 0.564727 7_4:-48907729 None:intergenic
TGGGCGGCGCCGCCTCCCCA+AGG 0.564760 7_4:+48907689 Msa1159300:CDS
GGAGACGGATATTGTGGCGG+AGG 0.564843 7_4:-48907723 None:intergenic
AAGCTGAGTTATAGTACACC+TGG 0.564865 7_4:+48910602 Msa1159300:CDS
GAAATGATGCCAATGCGTAA+AGG 0.565143 7_4:+48911858 Msa1159300:CDS
TCTGAAGGGACTGAGATGTC+AGG 0.566228 7_4:+48912086 Msa1159300:CDS
GTCTTGAATGTGAAGAAGCA+AGG 0.567791 7_4:+48910947 Msa1159300:CDS
ACAAAAGGAAAATGAAGATG+TGG 0.568246 7_4:+48912658 Msa1159300:three_prime_UTR
GAATCATCCTCAGTATCTGA+AGG 0.568311 7_4:+48912071 Msa1159300:CDS
CTGTTCACCCCTTTACGCAT+AGG 0.569750 7_4:-48912467 None:intergenic
AGCGGAAAACACCACTGGAA+AGG 0.571776 7_4:+48912504 Msa1159300:CDS
TGCGGCAATTCGCCGGTGGG+AGG 0.572932 7_4:-48907997 None:intergenic
TTGATTTCATATTGGAGATG+GGG 0.574357 7_4:+48912770 Msa1159300:three_prime_UTR
TCACATTTCCAAGACGTGAA+AGG 0.575203 7_4:+48911624 Msa1159300:CDS
GTTCTCAGATGCTGAACCTG+TGG 0.575630 7_4:-48912267 None:intergenic
GAGCAAGCGGAAAACACCAC+TGG 0.575777 7_4:+48912499 Msa1159300:CDS
ACCAGAGTGTTGGAACAGAA+TGG 0.576410 7_4:+48912288 Msa1159300:CDS
GGCACGACGTTGGTTTAACA+AGG 0.578881 7_4:+48911263 Msa1159300:CDS
GCATCTGAGAACCAGAGTGT+TGG 0.579809 7_4:+48912278 Msa1159300:CDS
TGGAAAATTCTGGCCATGGA+TGG 0.580741 7_4:-48907921 None:intergenic
TGGTCAGGGAAAAGTTTAGA+GGG 0.581187 7_4:+48912308 Msa1159300:CDS
GCTAGACCTGAACAGAGTCC+AGG 0.581585 7_4:+48912119 Msa1159300:CDS
GAGTTATGCAAGTAGCTGCT+TGG 0.582628 7_4:+48910502 Msa1159300:CDS
AAATTCTGGCCATGGATGGT+GGG 0.583089 7_4:-48907917 None:intergenic
TTGGTCAACCTCCTCTCCAG+TGG 0.584034 7_4:-48911402 None:intergenic
TGGAAATGAAAGGAGAAAGA+GGG 0.588915 7_4:-48907751 None:intergenic
TGGATGTGATGTGGTATTGG+TGG 0.590402 7_4:-48911172 None:intergenic
GAATTTGTTCCATCTGCCTG+TGG 0.595417 7_4:-48912029 None:intergenic
ATATAAGAGACGTTTGGCCA+TGG 0.595895 7_4:+48911935 Msa1159300:CDS
ATGGAACAAATTCAACAGAC+AGG 0.596508 7_4:+48912039 Msa1159300:CDS
GTTGGTGGCTAATGAAGAGA+AGG 0.597342 7_4:+48911242 Msa1159300:CDS
ACAGATTCGTTGTGAGCAAG+CGG 0.598905 7_4:+48912486 Msa1159300:CDS
TGGGAGGAAAACCATCGGCG+GGG 0.599451 7_4:-48907981 None:intergenic
TCAGTGCAAAATCAAATACC+TGG 0.600487 7_4:+48910641 Msa1159300:CDS
CCTGTCAAGAGAGAAAATGA+AGG 0.601602 7_4:+48912578 Msa1159300:CDS
AAACAGAAACAAACCTGAGA+AGG 0.601875 7_4:-48908065 None:intergenic
TGAACCTGTGGATGAACTCT+CGG 0.602609 7_4:-48912255 None:intergenic
CATTTCAGGGAAATCATCAT+CGG 0.606138 7_4:-48911841 None:intergenic
CCTTAATTTGGGCAACACGA+CGG 0.610893 7_4:-48912394 None:intergenic
GCCTCCTCGGACATATCCAA+AGG 0.611688 7_4:-48912353 None:intergenic
GTCCAGAGTATCACGAGACT+TGG 0.612050 7_4:-48911496 None:intergenic
CTCAGTCCCTTCAGATACTG+AGG 0.612291 7_4:-48912078 None:intergenic
TTTGAGCGTACAATGCCTCC+CGG 0.614647 7_4:+48910671 Msa1159300:CDS
ACTAACAGTGGAGTCACCGT+TGG 0.614890 7_4:-48908262 None:intergenic
GCTGCTTGGTCTCTTCAGAA+AGG 0.615519 7_4:+48910516 Msa1159300:CDS
GTGTTGGAACAGAATGGTCA+GGG 0.616106 7_4:+48912294 Msa1159300:CDS
ATTGAATCAATTTAAACCGG+AGG 0.618081 7_4:-48907575 None:intergenic
GCTTACGGTGTGATTGCAAG+CGG 0.623530 7_4:+48911127 Msa1159300:CDS
TGAGGAAAACTCCACTGGAG+AGG 0.625101 7_4:+48911391 Msa1159300:CDS
TAGATGGTTTAGAAAGATTG+CGG 0.625827 7_4:+48911782 Msa1159300:CDS
AGTATTACCAGATTGCTCCA+TGG 0.627499 7_4:-48911952 None:intergenic
GCCGGTGGGAGGAAAACCAT+CGG 0.628392 7_4:-48907986 None:intergenic
GATGTCAATCTCCTTTCCAG+TGG 0.628941 7_4:-48912515 None:intergenic
CTTGAGATCTGATCAGAAGG+AGG 0.633242 7_4:-48912143 None:intergenic
AAGTTGAGGACTATAAAACT+GGG 0.634387 7_4:+48911466 Msa1159300:CDS
TACTGAGGATGATTCAACAC+TGG 0.638239 7_4:-48912063 None:intergenic
GGAAAACTCCACTGGAGAGG+AGG 0.638678 7_4:+48911394 Msa1159300:CDS
AGGAGGCAAAGGCAGAGAGG+TGG 0.639211 7_4:+48912369 Msa1159300:CDS
AATAATGCCTATGCGTAAAG+GGG 0.640140 7_4:+48912460 Msa1159300:CDS
GTTGCCGTTGTGGTTGAACA+TGG 0.640291 7_4:+48908180 Msa1159300:CDS
AATCATCCTCAGTATCTGAA+GGG 0.641884 7_4:+48912072 Msa1159300:CDS
ATGAAGAGAAGGCACGACGT+TGG 0.642250 7_4:+48911253 Msa1159300:CDS
CAAAACATTGAAATGAAAAG+GGG 0.644747 7_4:+48910695 Msa1159300:CDS
GGTGCTGAACAAAATTTCAG+TGG 0.648311 7_4:+48911570 Msa1159300:CDS
ACTGGCATATGATGGAAAAG+GGG 0.651966 7_4:-48911667 None:intergenic
CCAATACCACATCACATCCA+GGG 0.653487 7_4:+48911175 Msa1159300:CDS
CCGAGGAGGCAAAGGCAGAG+AGG 0.655109 7_4:+48912366 Msa1159300:CDS
GGAAACAGAATCCTGCGAGT+CGG 0.660654 7_4:-48908220 None:intergenic
TCCATACCCTGGATGTGATG+TGG 0.662623 7_4:-48911181 None:intergenic
TCCTTTGGATATGTCCGAGG+AGG 0.663246 7_4:+48912352 Msa1159300:CDS
CTGACCGAGAGTTCATCCAC+AGG 0.667426 7_4:+48912251 Msa1159300:CDS
CCAGTGAGGGGAGATTGTGA+AGG 0.670135 7_4:-48907892 None:intergenic
GTACGCTCAAATCTACCACC+AGG 0.671074 7_4:-48910659 None:intergenic
AGAGGAGACGGATATTGTGG+CGG 0.674499 7_4:-48907726 None:intergenic
GGATCCTTTGGATATGTCCG+AGG 0.677529 7_4:+48912349 Msa1159300:CDS
GTGCAAAATCAAATACCTGG+TGG 0.682847 7_4:+48910644 Msa1159300:CDS
CAATATGAAATCAATCAAAG+GGG 0.687402 7_4:-48912761 None:intergenic
GAAGAAGATGAACCTTGGGG+AGG 0.689234 7_4:-48907701 None:intergenic
AGTACCATGTTCAACCACAA+CGG 0.691064 7_4:-48908184 None:intergenic
GAAAAGTTTAGAGGGATCAG+CGG 0.701326 7_4:+48912316 Msa1159300:CDS
TGAATGAAGAAAAGAGAGTG+CGG 0.704407 7_4:-48907777 None:intergenic
CAAGCACTGACTTCAGCCTG+CGG 0.720011 7_4:-48908015 None:intergenic
GAGGAAGAAGATGAACCTTG+GGG 0.727162 7_4:-48907704 None:intergenic
ATGAAGAAAAGAGAGTGCGG+TGG 0.745588 7_4:-48907774 None:intergenic
AGTTGAGGACTATAAAACTG+GGG 0.750422 7_4:+48911467 Msa1159300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCTAATTCATTTTAATAT+AGG + chr7_4:48908139-48908158 Msa1159300:intron 10.0%
!! AATATAAAATAAAGTTGAAT+TGG + chr7_4:48908381-48908400 Msa1159300:intron 10.0%
!! AAACAAAAAAATAAATAGAA+GGG - chr7_4:48908952-48908971 None:intergenic 10.0%
!!! AACTATTTGTTTTTTTTTAA+TGG + chr7_4:48909440-48909459 Msa1159300:intron 10.0%
!! AACAAAAAAATAAATAGAAG+GGG - chr7_4:48908951-48908970 None:intergenic 15.0%
!! CAAACAAAAAAATAAATAGA+AGG - chr7_4:48908953-48908972 None:intergenic 15.0%
!! AATAAATTAATAGAAGCTTA+AGG - chr7_4:48909083-48909102 None:intergenic 15.0%
!! CAATAAACAATAACAATAAT+AGG - chr7_4:48910103-48910122 None:intergenic 15.0%
!! AGAAATATGAATTTAAGAAA+AGG - chr7_4:48910233-48910252 None:intergenic 15.0%
!!! TCTTAAATTCATATTTCTAT+TGG + chr7_4:48910235-48910254 Msa1159300:intron 15.0%
!!! CTTAAATTCATATTTCTATT+GGG + chr7_4:48910236-48910255 Msa1159300:intron 15.0%
!!! AAAATAAGTTTTAGGTCATT+TGG - chr7_4:48907501-48907520 None:intergenic 20.0%
!!! AATGACCTAAAACTTATTTT+AGG + chr7_4:48907501-48907520 Msa1159300:five_prime_UTR 20.0%
!!! TATAGCCTAAAATAAGTTTT+AGG - chr7_4:48907509-48907528 None:intergenic 20.0%
!!! ACTTATTTTAGGCTATAAAT+AGG + chr7_4:48907512-48907531 Msa1159300:five_prime_UTR 20.0%
!! TGAATTGAATCAATTTAAAC+CGG - chr7_4:48907581-48907600 None:intergenic 20.0%
!! TGAATTAGAATTAAATCGAA+TGG - chr7_4:48908130-48908149 None:intergenic 20.0%
!! ACATTTATGATAGAACATTA+TGG + chr7_4:48908621-48908640 Msa1159300:intron 20.0%
!!! AAAAGTATGATCTTTCATAT+TGG + chr7_4:48909054-48909073 Msa1159300:intron 20.0%
!! TAATTATTCTATAGTTCAGT+TGG + chr7_4:48909416-48909435 Msa1159300:intron 20.0%
!! TCAGGAAAAAATAATAAAGA+TGG + chr7_4:48909613-48909632 Msa1159300:intron 20.0%
!! ATATCATGAACAAATATAGT+AGG - chr7_4:48909650-48909669 None:intergenic 20.0%
!! CTAAAATGAAATTTACATAG+TGG - chr7_4:48909706-48909725 None:intergenic 20.0%
!!! ATGTAAATTTCATTTTAGTC+TGG + chr7_4:48909708-48909727 Msa1159300:intron 20.0%
!!! TTTTTTTTTCTAACAAAACG+TGG + chr7_4:48910026-48910045 Msa1159300:intron 20.0%
!!! AAGCAATTTAAAATATCAGT+TGG + chr7_4:48910183-48910202 Msa1159300:intron 20.0%
!! TTTAAAGAAATGAAGAAAAG+TGG + chr7_4:48910259-48910278 Msa1159300:intron 20.0%
!! ACAAAACATTGAAATGAAAA+GGG + chr7_4:48910694-48910713 Msa1159300:CDS 20.0%
!!! ATGATTTTAGAAAATACCTT+AGG - chr7_4:48910733-48910752 None:intergenic 20.0%
!! ACATAGTTTATTATTTCACT+GGG - chr7_4:48910777-48910796 None:intergenic 20.0%
!! AACATAGTTTATTATTTCAC+TGG - chr7_4:48910778-48910797 None:intergenic 20.0%
!! TATGTTATATTGTGTAATAC+TGG + chr7_4:48910792-48910811 Msa1159300:intron 20.0%
!! AAAATGAAAATCCTGTTAAT+TGG - chr7_4:48911068-48911087 None:intergenic 20.0%
!! TCAAGTAAAAACAATCATAT+TGG + chr7_4:48912161-48912180 Msa1159300:CDS 20.0%
!! TTATTTATCTATCTTTGTTG+AGG + chr7_4:48912738-48912757 Msa1159300:three_prime_UTR 20.0%
!! GATAGAAAACATGAAAATAT+TGG - chr7_4:48912836-48912855 None:intergenic 20.0%
!! TAGATTATAATTCCATTTCT+AGG - chr7_4:48912864-48912883 None:intergenic 20.0%
!!! GAATTATAATCTAGTTTCTA+TGG + chr7_4:48912871-48912890 Msa1159300:three_prime_UTR 20.0%
! GATTCAATTCAATATCTCAT+TGG + chr7_4:48907590-48907609 Msa1159300:five_prime_UTR 25.0%
! ATAAACAGAGGAATGAAATT+TGG - chr7_4:48908091-48908110 None:intergenic 25.0%
!!! CTTTTTCATGCTTTATATTC+TGG + chr7_4:48908289-48908308 Msa1159300:intron 25.0%
! CAAGTTCGTACATTTAAAAA+CGG - chr7_4:48908590-48908609 None:intergenic 25.0%
! TTTATGATAGAACATTATGG+CGG + chr7_4:48908624-48908643 Msa1159300:intron 25.0%
! CATAAATCATTATCCTTAGT+AGG + chr7_4:48908897-48908916 Msa1159300:intron 25.0%
! AAACAAATAGAATTGATCCA+GGG + chr7_4:48908973-48908992 Msa1159300:intron 25.0%
!!! TTTTTTGCAGAATTCCAAAA+TGG - chr7_4:48909151-48909170 None:intergenic 25.0%
!!! TCTCTCTAGTTATTGTTTTA+TGG + chr7_4:48909215-48909234 Msa1159300:intron 25.0%
!! CTGGAGATAAGATTTTATAT+AGG + chr7_4:48909304-48909323 Msa1159300:intron 25.0%
!! TTTTATATAGGAGAGAAAGA+AGG + chr7_4:48909316-48909335 Msa1159300:intron 25.0%
! TTTATATAGGAGAGAAAGAA+GGG + chr7_4:48909317-48909336 Msa1159300:intron 25.0%
! TTAATATTTAGTCCTTCGTT+CGG + chr7_4:48909485-48909504 Msa1159300:intron 25.0%
! GAACTATTTGAATTGTATGA+AGG + chr7_4:48909576-48909595 Msa1159300:intron 25.0%
!! GTTAGATCTTATGCAATTTT+TGG + chr7_4:48909839-48909858 Msa1159300:intron 25.0%
!!! TGAAAAACATTTTTGAGTGA+TGG + chr7_4:48909864-48909883 Msa1159300:intron 25.0%
! TTATAACATATCTAGACTAC+AGG + chr7_4:48909895-48909914 Msa1159300:intron 25.0%
! TTAAAATATCAGTTGGAGAT+TGG + chr7_4:48910190-48910209 Msa1159300:intron 25.0%
! GAAAAGATAAACAGATATTC+AGG - chr7_4:48910299-48910318 None:intergenic 25.0%
! GAAACAATAAGCATATTGTA+TGG + chr7_4:48910340-48910359 Msa1159300:intron 25.0%
!!! ATTTTGACCAGTTTTTTAAG+CGG + chr7_4:48910404-48910423 Msa1159300:intron 25.0%
!! TTTCATTTCAATGTTTTGTC+CGG - chr7_4:48910693-48910712 None:intergenic 25.0%
! GACAAAACATTGAAATGAAA+AGG + chr7_4:48910693-48910712 Msa1159300:CDS 25.0%
! CAAAACATTGAAATGAAAAG+GGG + chr7_4:48910695-48910714 Msa1159300:CDS 25.0%
!! TAACAGGATTTTCATTTTCA+AGG + chr7_4:48911070-48911089 Msa1159300:intron 25.0%
!! AGGTGTGATTTTCATAATTA+TGG + chr7_4:48911090-48911109 Msa1159300:intron 25.0%
!! GGTGTGATTTTCATAATTAT+GGG + chr7_4:48911091-48911110 Msa1159300:intron 25.0%
!! CAATATCTGAAGTATTAGAA+TGG - chr7_4:48911215-48911234 None:intergenic 25.0%
!!! ATTTGTTGTTAGCAAGAAAA+AGG + chr7_4:48911890-48911909 Msa1159300:CDS 25.0%
! CTCAGAAATATCCTTAATTT+GGG - chr7_4:48912408-48912427 None:intergenic 25.0%
!!! AGAGTAGTGTTTATTTTTGA+AGG + chr7_4:48912608-48912627 Msa1159300:three_prime_UTR 25.0%
! TTTACCAGCAATTATACAAA+AGG + chr7_4:48912643-48912662 Msa1159300:three_prime_UTR 25.0%
!! TTTTCCTTTTGTATAATTGC+TGG - chr7_4:48912650-48912669 None:intergenic 25.0%
! CAATATGAAATCAATCAAAG+GGG - chr7_4:48912764-48912783 None:intergenic 25.0%
! CCAATATGAAATCAATCAAA+GGG - chr7_4:48912765-48912784 None:intergenic 25.0%
! TCCAATATGAAATCAATCAA+AGG - chr7_4:48912766-48912785 None:intergenic 25.0%
!! ATTGATTTCATATTGGAGAT+GGG + chr7_4:48912769-48912788 Msa1159300:three_prime_UTR 25.0%
ATTGAATCAATTTAAACCGG+AGG - chr7_4:48907578-48907597 None:intergenic 30.0%
GAACAAGAATGAATAAACAG+AGG - chr7_4:48908103-48908122 None:intergenic 30.0%
! ATGAAGTCTTTTCTATCCAA+CGG + chr7_4:48908246-48908265 Msa1159300:CDS 30.0%
! TGAAAAAGTATGACTAACAG+TGG - chr7_4:48908277-48908296 None:intergenic 30.0%
GTAAGTTGTTTATGCAAACA+AGG - chr7_4:48908315-48908334 None:intergenic 30.0%
GTATAAGCTATAAGCTATCT+TGG + chr7_4:48908408-48908427 Msa1159300:intron 30.0%
AAACACTTGCGAAACTATTT+GGG - chr7_4:48908483-48908502 None:intergenic 30.0%
TAAACACTTGCGAAACTATT+TGG - chr7_4:48908484-48908503 None:intergenic 30.0%
ACATCATAAGACAAGAAACT+AGG + chr7_4:48908727-48908746 Msa1159300:intron 30.0%
! CAATTTTGCATGGCAATATA+AGG - chr7_4:48908776-48908795 None:intergenic 30.0%
GAAACAAATAGAATTGATCC+AGG + chr7_4:48908972-48908991 Msa1159300:intron 30.0%
ATGTGTATGTATGATAGTTC+TGG + chr7_4:48909285-48909304 Msa1159300:intron 30.0%
TACAATTCAAATAGTTCCGA+GGG - chr7_4:48909573-48909592 None:intergenic 30.0%
ATACAATTCAAATAGTTCCG+AGG - chr7_4:48909574-48909593 None:intergenic 30.0%
!! AAGGTATTTTCGATAGTTTC+AGG + chr7_4:48909595-48909614 Msa1159300:intron 30.0%
! GTTTGAGCTGAAGTATTATA+TGG + chr7_4:48909796-48909815 Msa1159300:intron 30.0%
CAGGTTACATATGTCAATTT+CGG + chr7_4:48909914-48909933 Msa1159300:intron 30.0%
! TCTTTTCATCTTAAATCTCC+TGG + chr7_4:48909942-48909961 Msa1159300:intron 30.0%
CAACATTCAAATTTAGTCAC+TGG + chr7_4:48910065-48910084 Msa1159300:intron 30.0%
! AAGAAGCATATTGGTGTATA+TGG + chr7_4:48910146-48910165 Msa1159300:intron 30.0%
AAACAGATATTCAGGATTTC+AGG - chr7_4:48910291-48910310 None:intergenic 30.0%
! TTCTCAAATAGTTTAGAACG+AGG - chr7_4:48910323-48910342 None:intergenic 30.0%
!! AGGGTTTGTTAAAACATGAA+AGG - chr7_4:48910375-48910394 None:intergenic 30.0%
! TGGTCAAAATTTGAAACTGA+GGG - chr7_4:48910394-48910413 None:intergenic 30.0%
TCATAAACCGCTTAAAAAAC+TGG - chr7_4:48910414-48910433 None:intergenic 30.0%
! ATGATTTGTGCTTGATATGT+AGG + chr7_4:48910430-48910449 Msa1159300:intron 30.0%
! TTCATTTCAATGTTTTGTCC+GGG - chr7_4:48910692-48910711 None:intergenic 30.0%
! GTGATTTTCATAATTATGGG+AGG + chr7_4:48911094-48911113 Msa1159300:CDS 30.0%
ATACTTCAGATATTGATGCT+AGG + chr7_4:48911220-48911239 Msa1159300:CDS 30.0%
! GATACATGATGAAGATTTTC+CGG + chr7_4:48911323-48911342 Msa1159300:CDS 30.0%
CTATTAACTCCTTTCCTTAA+CGG - chr7_4:48911357-48911376 None:intergenic 30.0%
!! ATAGATTTGTTGTAAGCATG+AGG + chr7_4:48911373-48911392 Msa1159300:CDS 30.0%
!! AGTTTTATAGTCCTCAACTT+CGG - chr7_4:48911466-48911485 None:intergenic 30.0%
AAGTTGAGGACTATAAAACT+GGG + chr7_4:48911466-48911485 Msa1159300:CDS 30.0%
TTCAAGTGAAAATGTCATCA+AGG + chr7_4:48911728-48911747 Msa1159300:CDS 30.0%
AAGCTGAAAAATCTGATAGA+TGG + chr7_4:48911766-48911785 Msa1159300:CDS 30.0%
TAGATGGTTTAGAAAGATTG+CGG + chr7_4:48911782-48911801 Msa1159300:CDS 30.0%
!! GATATTGCACTTGTTATATC+TGG - chr7_4:48911822-48911841 None:intergenic 30.0%
!! TCATATTGGTTCTACTTATG+CGG + chr7_4:48912175-48912194 Msa1159300:CDS 30.0%
GCTCAGAAATATCCTTAATT+TGG - chr7_4:48912409-48912428 None:intergenic 30.0%
ACAAAAGGAAAATGAAGATG+TGG + chr7_4:48912658-48912677 Msa1159300:three_prime_UTR 30.0%
! CCCTTTGATTGATTTCATAT+TGG + chr7_4:48912762-48912781 Msa1159300:three_prime_UTR 30.0%
! GATTGATTTCATATTGGAGA+TGG + chr7_4:48912768-48912787 Msa1159300:three_prime_UTR 30.0%
TTGATTTCATATTGGAGATG+GGG + chr7_4:48912770-48912789 Msa1159300:three_prime_UTR 30.0%
TTCTATCTTGATCCTAGAAA+TGG + chr7_4:48912849-48912868 Msa1159300:three_prime_UTR 30.0%
TTCAATATCTCATTGGTCCT+AGG + chr7_4:48907597-48907616 Msa1159300:five_prime_UTR 35.0%
TCATTGGTCCTAGGAAAATA+TGG + chr7_4:48907606-48907625 Msa1159300:five_prime_UTR 35.0%
! CAATCGAACCATATTTTCCT+AGG - chr7_4:48907617-48907636 None:intergenic 35.0%
TGGAAATGAAAGGAGAAAGA+GGG - chr7_4:48907754-48907773 None:intergenic 35.0%
TGAATGAAGAAAAGAGAGTG+CGG - chr7_4:48907780-48907799 None:intergenic 35.0%
! TGTGAATGTGTTGTTGTTGT+TGG - chr7_4:48907867-48907886 None:intergenic 35.0%
GAGAGAAATCTGGAAAATTC+TGG - chr7_4:48907934-48907953 None:intergenic 35.0%
AAACAGAAACAAACCTGAGA+AGG - chr7_4:48908068-48908087 None:intergenic 35.0%
GGATAGAAAAGACTTCATCT+TGG - chr7_4:48908244-48908263 None:intergenic 35.0%
CACTAATGCAGTGTTACAAA+GGG - chr7_4:48908545-48908564 None:intergenic 35.0%
! AACACTGCATTAGTGCTTTT+TGG + chr7_4:48908550-48908569 Msa1159300:intron 35.0%
!! ACACTGCATTAGTGCTTTTT+GGG + chr7_4:48908551-48908570 Msa1159300:intron 35.0%
TCATAAGACAAGAAACTAGG+TGG + chr7_4:48908730-48908749 Msa1159300:intron 35.0%
!! CATGAAAGCACAATTTTGCA+TGG - chr7_4:48908786-48908805 None:intergenic 35.0%
TGCAAAATTGTGCTTTCATG+CGG + chr7_4:48908786-48908805 Msa1159300:intron 35.0%
GAACACACTCATAATGTCTA+AGG - chr7_4:48908836-48908855 None:intergenic 35.0%
GTGTTCAACGTTTCTTAGAT+TGG + chr7_4:48908850-48908869 Msa1159300:intron 35.0%
TTCAACGTTTCTTAGATTGG+AGG + chr7_4:48908853-48908872 Msa1159300:intron 35.0%
ATTATCCTTAGTAGGCTACT+GGG + chr7_4:48908905-48908924 Msa1159300:intron 35.0%
! ACTTTTGAGCAGGAAGTTTA+AGG - chr7_4:48909040-48909059 None:intergenic 35.0%
! GAAAGATCATACTTTTGAGC+AGG - chr7_4:48909050-48909069 None:intergenic 35.0%
TGGCAACTTGTGCAAATAAA+TGG - chr7_4:48909131-48909150 None:intergenic 35.0%
!! ATTTGCACAAGTTGCCATTT+TGG + chr7_4:48909134-48909153 Msa1159300:intron 35.0%
!! GAAAGAAGGGAAATTTGTTG+AGG + chr7_4:48909330-48909349 Msa1159300:intron 35.0%
ACAATTCAAATAGTTCCGAG+GGG - chr7_4:48909572-48909591 None:intergenic 35.0%
! TATGCTCTTTTACGTTCAGT+AGG + chr7_4:48910002-48910021 Msa1159300:intron 35.0%
ATATGCTTCTTATGCAGCTA+AGG - chr7_4:48910137-48910156 None:intergenic 35.0%
! TAGCTGCATAAGAAGCATAT+TGG + chr7_4:48910137-48910156 Msa1159300:intron 35.0%
GATTGGAAATTCTGATCATG+TGG + chr7_4:48910207-48910226 Msa1159300:intron 35.0%
! CTGGTCAAAATTTGAAACTG+AGG - chr7_4:48910395-48910414 None:intergenic 35.0%
ATTTGCTTTATCAGAGTCCA+AGG - chr7_4:48910456-48910475 None:intergenic 35.0%
GGACTCTGATAAAGCAAATA+TGG + chr7_4:48910457-48910476 Msa1159300:CDS 35.0%
TTCACCAAATAGGTTTCTGA+TGG - chr7_4:48910576-48910595 None:intergenic 35.0%
GCTTGAAAAGTTCACCAAAT+AGG - chr7_4:48910586-48910605 None:intergenic 35.0%
TGCACTGAATCAAAAGAGTT+GGG - chr7_4:48910629-48910648 None:intergenic 35.0%
TTGCACTGAATCAAAAGAGT+TGG - chr7_4:48910630-48910649 None:intergenic 35.0%
TCAGTGCAAAATCAAATACC+TGG + chr7_4:48910641-48910660 Msa1159300:CDS 35.0%
TTGAAATGAAAAGGGGTGAT+TGG + chr7_4:48910702-48910721 Msa1159300:CDS 35.0%
TGTGTAATACTGGAAAACCA+AGG + chr7_4:48910802-48910821 Msa1159300:intron 35.0%
! GCATTCCCTTTTTCTAATAC+TGG + chr7_4:48910886-48910905 Msa1159300:intron 35.0%
ACCTGCCAGTATTAGAAAAA+GGG - chr7_4:48910894-48910913 None:intergenic 35.0%
AGGGAGAAAAATACTTACTG+AGG - chr7_4:48911009-48911028 None:intergenic 35.0%
TGTATGCATCAAAACTTCGA+GGG - chr7_4:48911044-48911063 None:intergenic 35.0%
ATGTATGCATCAAAACTTCG+AGG - chr7_4:48911045-48911064 None:intergenic 35.0%
GATGCATACATCCAATTAAC+AGG + chr7_4:48911054-48911073 Msa1159300:intron 35.0%
TTCAGATATTGATGCTAGGT+TGG + chr7_4:48911224-48911243 Msa1159300:CDS 35.0%
TTCCTTAACGGCATTATTTC+CGG - chr7_4:48911345-48911364 None:intergenic 35.0%
GAAATAATGCCGTTAAGGAA+AGG + chr7_4:48911345-48911364 Msa1159300:CDS 35.0%
! GTTTTATAGTCCTCAACTTC+GGG - chr7_4:48911465-48911484 None:intergenic 35.0%
GAAGTTGAGGACTATAAAAC+TGG + chr7_4:48911465-48911484 Msa1159300:CDS 35.0%
AGTTGAGGACTATAAAACTG+GGG + chr7_4:48911467-48911486 Msa1159300:CDS 35.0%
!! ATGTTTTTGTAGTCAGATCG+AGG - chr7_4:48911549-48911568 None:intergenic 35.0%
TCGATCTGACTACAAAAACA+TGG + chr7_4:48911548-48911567 Msa1159300:CDS 35.0%
CGATCTGACTACAAAAACAT+GGG + chr7_4:48911549-48911568 Msa1159300:CDS 35.0%
GATGTATTGCTAGCAATTGA+CGG - chr7_4:48911606-48911625 None:intergenic 35.0%
! AACTGGCATATGATGGAAAA+GGG - chr7_4:48911671-48911690 None:intergenic 35.0%
CATTTCAGGGAAATCATCAT+CGG - chr7_4:48911844-48911863 None:intergenic 35.0%
TTGTTAGCAAGAAAAAGGAC+CGG + chr7_4:48911895-48911914 Msa1159300:CDS 35.0%
!! TTTTTGGCAAAGTAATCTGG+GGG - chr7_4:48912002-48912021 None:intergenic 35.0%
!! CTTTTTGGCAAAGTAATCTG+GGG - chr7_4:48912003-48912022 None:intergenic 35.0%
!! CCTTTTTGGCAAAGTAATCT+GGG - chr7_4:48912004-48912023 None:intergenic 35.0%
!! TCCTTTTTGGCAAAGTAATC+TGG - chr7_4:48912005-48912024 None:intergenic 35.0%
ATGGAACAAATTCAACAGAC+AGG + chr7_4:48912039-48912058 Msa1159300:CDS 35.0%
AATCATCCTCAGTATCTGAA+GGG + chr7_4:48912072-48912091 Msa1159300:CDS 35.0%
TTACTTGAGATCTGATCAGA+AGG - chr7_4:48912149-48912168 None:intergenic 35.0%
ATTGAAGGAAAATCTTCGTC+TGG - chr7_4:48912443-48912462 None:intergenic 35.0%
TTACGCATAGGCATTATTGA+AGG - chr7_4:48912458-48912477 None:intergenic 35.0%
TCAATAATGCCTATGCGTAA+AGG + chr7_4:48912458-48912477 Msa1159300:CDS 35.0%
CAATAATGCCTATGCGTAAA+GGG + chr7_4:48912459-48912478 Msa1159300:CDS 35.0%
AATAATGCCTATGCGTAAAG+GGG + chr7_4:48912460-48912479 Msa1159300:CDS 35.0%
TCACAACTGGAAGATTTCTT+CGG - chr7_4:48912550-48912569 None:intergenic 35.0%
GAATCAATTTAAACCGGAGG+AGG - chr7_4:48907575-48907594 None:intergenic 40.0%
GTGGAAATGAAAGGAGAAAG+AGG - chr7_4:48907755-48907774 None:intergenic 40.0%
GTGAGAGAAGAAGAAGAAGT+AGG - chr7_4:48907811-48907830 None:intergenic 40.0%
!!! GAGGCTTTGAGTTTGAGTTT+TGG - chr7_4:48907835-48907854 None:intergenic 40.0%
! GAATGTGTTGTTGTTGTTGG+TGG - chr7_4:48907864-48907883 None:intergenic 40.0%
AATCTGGAAAATTCTGGCCA+TGG - chr7_4:48907928-48907947 None:intergenic 40.0%
GAAACAAACCTGAGAAGGTT+AGG - chr7_4:48908063-48908082 None:intergenic 40.0%
AGTACCATGTTCAACCACAA+CGG - chr7_4:48908187-48908206 None:intergenic 40.0%
GCACTAATGCAGTGTTACAA+AGG - chr7_4:48908546-48908565 None:intergenic 40.0%
! ACTAAGTGGGCTCAATTACA+TGG - chr7_4:48908658-48908677 None:intergenic 40.0%
CAAGTCATATCGCACTAAGT+GGG - chr7_4:48908671-48908690 None:intergenic 40.0%
! ATGTCTAAGGTGCAAAACAC+CGG - chr7_4:48908823-48908842 None:intergenic 40.0%
CATTATCCTTAGTAGGCTAC+TGG + chr7_4:48908904-48908923 Msa1159300:intron 40.0%
CAAATAGAATTGATCCAGGG+TGG + chr7_4:48908976-48908995 Msa1159300:intron 40.0%
CATGCAGAGAGACAAATTTC+TGG - chr7_4:48909268-48909287 None:intergenic 40.0%
TGGTTTGAGCTAAAGGGAAA+AGG - chr7_4:48909533-48909552 None:intergenic 40.0%
!! CTCAACTGGTTTGAGCTAAA+GGG - chr7_4:48909539-48909558 None:intergenic 40.0%
!! ACTCAACTGGTTTGAGCTAA+AGG - chr7_4:48909540-48909559 None:intergenic 40.0%
CAATTCAAATAGTTCCGAGG+GGG - chr7_4:48909571-48909590 None:intergenic 40.0%
TCAGCTCAAACATAAGACAG+AGG - chr7_4:48909787-48909806 None:intergenic 40.0%
TAAATCTCCTGGATCAGACT+TGG + chr7_4:48909953-48909972 Msa1159300:intron 40.0%
TCCTCCATCAGAAACCTATT+TGG + chr7_4:48910569-48910588 Msa1159300:CDS 40.0%
ACCAAATAGGTTTCTGATGG+AGG - chr7_4:48910573-48910592 None:intergenic 40.0%
AAGCTGAGTTATAGTACACC+TGG + chr7_4:48910602-48910621 Msa1159300:CDS 40.0%
GTGCAAAATCAAATACCTGG+TGG + chr7_4:48910644-48910663 Msa1159300:CDS 40.0%
! ATTTCAATGTTTTGTCCGGG+AGG - chr7_4:48910689-48910708 None:intergenic 40.0%
! TCCCTTTTTCTAATACTGGC+AGG + chr7_4:48910890-48910909 Msa1159300:intron 40.0%
CACCTGCCAGTATTAGAAAA+AGG - chr7_4:48910895-48910914 None:intergenic 40.0%
GTCTTGAATGTGAAGAAGCA+AGG + chr7_4:48910947-48910966 Msa1159300:CDS 40.0%
TCGAGGGAAAAAGATTCAGA+GGG - chr7_4:48911028-48911047 None:intergenic 40.0%
TTCGAGGGAAAAAGATTCAG+AGG - chr7_4:48911029-48911048 None:intergenic 40.0%
GAACCCAAAGATATTTGTCC+AGG - chr7_4:48911153-48911172 None:intergenic 40.0%
TGGTTTACATTTCCATACCC+TGG - chr7_4:48911195-48911214 None:intergenic 40.0%
! AGATATTGATGCTAGGTTGG+TGG + chr7_4:48911227-48911246 Msa1159300:CDS 40.0%
TTCCGGAAATAATGCCGTTA+AGG + chr7_4:48911340-48911359 Msa1159300:CDS 40.0%
GCTTCTCTTGTATTGAGCAT+TGG - chr7_4:48911424-48911443 None:intergenic 40.0%
TGCTCAATACAAGAGAAGCT+TGG + chr7_4:48911425-48911444 Msa1159300:CDS 40.0%
GCTCAATACAAGAGAAGCTT+GGG + chr7_4:48911426-48911445 Msa1159300:CDS 40.0%
! TTTTGTAGTCAGATCGAGGA+GGG - chr7_4:48911545-48911564 None:intergenic 40.0%
! TTTTTGTAGTCAGATCGAGG+AGG - chr7_4:48911546-48911565 None:intergenic 40.0%
! GGTGCTGAACAAAATTTCAG+TGG + chr7_4:48911570-48911589 Msa1159300:CDS 40.0%
TCACATTTCCAAGACGTGAA+AGG + chr7_4:48911624-48911643 Msa1159300:CDS 40.0%
CACATTTCCAAGACGTGAAA+GGG + chr7_4:48911625-48911644 Msa1159300:CDS 40.0%
! ACTGGCATATGATGGAAAAG+GGG - chr7_4:48911670-48911689 None:intergenic 40.0%
! GAACTGGCATATGATGGAAA+AGG - chr7_4:48911672-48911691 None:intergenic 40.0%
TTTCCATCATATGCCAGTTC+TGG + chr7_4:48911672-48911691 Msa1159300:CDS 40.0%
! TACGCATTGGCATCATTTCA+GGG - chr7_4:48911857-48911876 None:intergenic 40.0%
! TTACGCATTGGCATCATTTC+AGG - chr7_4:48911858-48911877 None:intergenic 40.0%
GAAATGATGCCAATGCGTAA+AGG + chr7_4:48911858-48911877 Msa1159300:CDS 40.0%
! CGATTTTCTCCTTTACGCAT+TGG - chr7_4:48911870-48911889 None:intergenic 40.0%
!! CTTATATGCTGGTGTTGTCA+AGG - chr7_4:48911922-48911941 None:intergenic 40.0%
ACCAGCATATAAGAGACGTT+TGG + chr7_4:48911929-48911948 Msa1159300:CDS 40.0%
ATATAAGAGACGTTTGGCCA+TGG + chr7_4:48911935-48911954 Msa1159300:CDS 40.0%
AGTATTACCAGATTGCTCCA+TGG - chr7_4:48911955-48911974 None:intergenic 40.0%
CCCAGATTACTTTGCCAAAA+AGG + chr7_4:48912001-48912020 Msa1159300:CDS 40.0%
TGCCAAAAAGGAAAAACCAC+AGG + chr7_4:48912013-48912032 Msa1159300:CDS 40.0%
! TGCCTGTGGTTTTTCCTTTT+TGG - chr7_4:48912018-48912037 None:intergenic 40.0%
TACTGAGGATGATTCAACAC+TGG - chr7_4:48912066-48912085 None:intergenic 40.0%
GAATCATCCTCAGTATCTGA+AGG + chr7_4:48912071-48912090 Msa1159300:CDS 40.0%
AAGCAGTGGAAATTCAAGTC+AGG + chr7_4:48912202-48912221 Msa1159300:CDS 40.0%
ATGGTCAGGGAAAAGTTTAG+AGG + chr7_4:48912307-48912326 Msa1159300:CDS 40.0%
TGGTCAGGGAAAAGTTTAGA+GGG + chr7_4:48912308-48912327 Msa1159300:CDS 40.0%
GAAAAGTTTAGAGGGATCAG+CGG + chr7_4:48912316-48912335 Msa1159300:CDS 40.0%
! CCTTCATTTTCTCTCTTGAC+AGG - chr7_4:48912581-48912600 None:intergenic 40.0%
CCTGTCAAGAGAGAAAATGA+AGG + chr7_4:48912578-48912597 Msa1159300:CDS 40.0%
TTCTTCACTTCATCCTCCTC+CGG + chr7_4:48907559-48907578 Msa1159300:five_prime_UTR 45.0%
TGATCTATCTCATCCTCCTC+CGG + chr7_4:48907660-48907679 Msa1159300:five_prime_UTR 45.0%
GAGGAAGAAGATGAACCTTG+GGG - chr7_4:48907707-48907726 None:intergenic 45.0%
GGAGGAAGAAGATGAACCTT+GGG - chr7_4:48907708-48907727 None:intergenic 45.0%
! ATGAAGAAAAGAGAGTGCGG+TGG - chr7_4:48907777-48907796 None:intergenic 45.0%
!! TTGTTGTTGGTGGTGTTGTG+AGG - chr7_4:48907854-48907873 None:intergenic 45.0%
AAATTCTGGCCATGGATGGT+GGG - chr7_4:48907920-48907939 None:intergenic 45.0%
AAAATTCTGGCCATGGATGG+TGG - chr7_4:48907921-48907940 None:intergenic 45.0%
TGGAAAATTCTGGCCATGGA+TGG - chr7_4:48907924-48907943 None:intergenic 45.0%
GGAGATGTGTGAGAGAAATC+TGG - chr7_4:48907944-48907963 None:intergenic 45.0%
GAGATAGACCTAACCTTCTC+AGG + chr7_4:48908052-48908071 Msa1159300:CDS 45.0%
TGCGAGTCGGAGAACATAAA+CGG - chr7_4:48908210-48908229 None:intergenic 45.0%
CCAAGTCATATCGCACTAAG+TGG - chr7_4:48908672-48908691 None:intergenic 45.0%
CCACTTAGTGCGATATGACT+TGG + chr7_4:48908669-48908688 Msa1159300:intron 45.0%
AAGGTGCAAAACACCGGAAA+TGG - chr7_4:48908817-48908836 None:intergenic 45.0%
GAAAAGGAGTTGGAGGTCTT+GGG - chr7_4:48909517-48909536 None:intergenic 45.0%
CTAAAGGGAAAAGGAGTTGG+AGG - chr7_4:48909524-48909543 None:intergenic 45.0%
GAGCTAAAGGGAAAAGGAGT+TGG - chr7_4:48909527-48909546 None:intergenic 45.0%
AAATAGTTCCGAGGGGGATT+GGG - chr7_4:48909565-48909584 None:intergenic 45.0%
TGTGCTTGATATGTAGGCCT+TGG + chr7_4:48910436-48910455 Msa1159300:intron 45.0%
GAGTTATGCAAGTAGCTGCT+TGG + chr7_4:48910502-48910521 Msa1159300:CDS 45.0%
GAATCAAAAGAGTTGGGTCC+AGG - chr7_4:48910623-48910642 None:intergenic 45.0%
! CATTTTCTCTACGCTCACCT+TGG - chr7_4:48910822-48910841 None:intergenic 45.0%
GTGAAGAAGCAAGGCCAAAA+AGG + chr7_4:48910956-48910975 Msa1159300:CDS 45.0%
!! GGAGGAATGTAGCTTGCTTA+CGG + chr7_4:48911112-48911131 Msa1159300:CDS 45.0%
CGGCCTGGACAAATATCTTT+GGG + chr7_4:48911147-48911166 Msa1159300:CDS 45.0%
! TGGATGTGATGTGGTATTGG+TGG - chr7_4:48911175-48911194 None:intergenic 45.0%
ACCAATACCACATCACATCC+AGG + chr7_4:48911174-48911193 Msa1159300:CDS 45.0%
CCAATACCACATCACATCCA+GGG + chr7_4:48911175-48911194 Msa1159300:CDS 45.0%
!! GTTGGTGGCTAATGAAGAGA+AGG + chr7_4:48911242-48911261 Msa1159300:CDS 45.0%
AAGCATGAGGAAAACTCCAC+TGG + chr7_4:48911386-48911405 Msa1159300:CDS 45.0%
GATACTCTGGACGACATTCT+AGG + chr7_4:48911507-48911526 Msa1159300:CDS 45.0%
GACATTCTAGGTCGTTCAAC+TGG + chr7_4:48911519-48911538 Msa1159300:CDS 45.0%
TGTTGTTCCCTTTCACGTCT+TGG - chr7_4:48911635-48911654 None:intergenic 45.0%
TCACCAGAACTGGCATATGA+TGG - chr7_4:48911678-48911697 None:intergenic 45.0%
GCCAAACGTCTCTTATATGC+TGG - chr7_4:48911933-48911952 None:intergenic 45.0%
GCAAAGTAATCTGGGGGAAA+GGG - chr7_4:48911996-48912015 None:intergenic 45.0%
AAGGAAAAACCACAGGCAGA+TGG + chr7_4:48912020-48912039 Msa1159300:CDS 45.0%
! GAATTTGTTCCATCTGCCTG+TGG - chr7_4:48912032-48912051 None:intergenic 45.0%
CTTGAGATCTGATCAGAAGG+AGG - chr7_4:48912146-48912165 None:intergenic 45.0%
GATGAACTCTCGGTCAGATT+TGG - chr7_4:48912248-48912267 None:intergenic 45.0%
TGAACCTGTGGATGAACTCT+CGG - chr7_4:48912258-48912277 None:intergenic 45.0%
!! ACCAGAGTGTTGGAACAGAA+TGG + chr7_4:48912288-48912307 Msa1159300:CDS 45.0%
ACCATTCTGTTCCAACACTC+TGG - chr7_4:48912292-48912311 None:intergenic 45.0%
! AGTGTTGGAACAGAATGGTC+AGG + chr7_4:48912293-48912312 Msa1159300:CDS 45.0%
GTGTTGGAACAGAATGGTCA+GGG + chr7_4:48912294-48912313 Msa1159300:CDS 45.0%
TCGGACATATCCAAAGGATC+CGG - chr7_4:48912350-48912369 None:intergenic 45.0%
! CCTTAATTTGGGCAACACGA+CGG - chr7_4:48912397-48912416 None:intergenic 45.0%
ACAGATTCGTTGTGAGCAAG+CGG + chr7_4:48912486-48912505 Msa1159300:CDS 45.0%
GATGTCAATCTCCTTTCCAG+TGG - chr7_4:48912518-48912537 None:intergenic 45.0%
TCATCCTCCTCCGGCAAAAA+TGG + chr7_4:48907669-48907688 Msa1159300:exon 50.0%
CATCCTCCTCCGGCAAAAAT+GGG + chr7_4:48907670-48907689 Msa1159300:exon 50.0%
GAAGAAGATGAACCTTGGGG+AGG - chr7_4:48907704-48907723 None:intergenic 50.0%
CGGAGGAAGAAGATGAACCT+TGG - chr7_4:48907709-48907728 None:intergenic 50.0%
AGAGGAGACGGATATTGTGG+CGG - chr7_4:48907729-48907748 None:intergenic 50.0%
GAGAGAGGAGACGGATATTG+TGG - chr7_4:48907732-48907751 None:intergenic 50.0%
AGAAAGAGGGAGAGAGGAGA+CGG - chr7_4:48907741-48907760 None:intergenic 50.0%
GAAAGGAGAAAGAGGGAGAG+AGG - chr7_4:48907747-48907766 None:intergenic 50.0%
!! AGTGCGGTGGTGGAAATGAA+AGG - chr7_4:48907764-48907783 None:intergenic 50.0%
! AAGAAAAGAGAGTGCGGTGG+TGG - chr7_4:48907774-48907793 None:intergenic 50.0%
GAGGGGAGATTGTGAAGGTT+GGG - chr7_4:48907890-48907909 None:intergenic 50.0%
TGAGGGGAGATTGTGAAGGT+TGG - chr7_4:48907891-48907910 None:intergenic 50.0%
CTTCACAATCTCCCCTCACT+GGG + chr7_4:48907893-48907912 Msa1159300:CDS 50.0%
GTTGCCGTTGTGGTTGAACA+TGG + chr7_4:48908180-48908199 Msa1159300:CDS 50.0%
! GTTTATGTTCTCCGACTCGC+AGG + chr7_4:48908209-48908228 Msa1159300:CDS 50.0%
GGAAACAGAATCCTGCGAGT+CGG - chr7_4:48908223-48908242 None:intergenic 50.0%
ACTAACAGTGGAGTCACCGT+TGG - chr7_4:48908265-48908284 None:intergenic 50.0%
TCATGCGGTCTCTCCATTTC+CGG + chr7_4:48908801-48908820 Msa1159300:intron 50.0%
ACTCACCCAGTAGCCTACTA+AGG - chr7_4:48908913-48908932 None:intergenic 50.0%
TAGTAGGCTACTGGGTGAGT+AGG + chr7_4:48908913-48908932 Msa1159300:intron 50.0%
AGTAGGCTACTGGGTGAGTA+GGG + chr7_4:48908914-48908933 Msa1159300:intron 50.0%
!! GAAAACTAAGAGCACCACCC+TGG - chr7_4:48908993-48909012 None:intergenic 50.0%
GAGAACAAAAGTCGCTCTGG+CGG - chr7_4:48909189-48909208 None:intergenic 50.0%
GCAGAGAACAAAAGTCGCTC+TGG - chr7_4:48909192-48909211 None:intergenic 50.0%
CTTGGGTTCAAACCGAACGA+AGG - chr7_4:48909500-48909519 None:intergenic 50.0%
GGAAAAGGAGTTGGAGGTCT+TGG - chr7_4:48909518-48909537 None:intergenic 50.0%
TTGAGTTACCCAATCCCCCT+CGG + chr7_4:48909554-48909573 Msa1159300:intron 50.0%
CAAATAGTTCCGAGGGGGAT+TGG - chr7_4:48909566-48909585 None:intergenic 50.0%
GCTAAAGCCAAGTCTGATCC+AGG - chr7_4:48909963-48909982 None:intergenic 50.0%
GCTGCTTGGTCTCTTCAGAA+AGG + chr7_4:48910516-48910535 Msa1159300:CDS 50.0%
GTACGCTCAAATCTACCACC+AGG - chr7_4:48910662-48910681 None:intergenic 50.0%
TTTGAGCGTACAATGCCTCC+CGG + chr7_4:48910671-48910690 Msa1159300:CDS 50.0%
GGGGTGATTGGATTTGCCTA+AGG + chr7_4:48910714-48910733 Msa1159300:CDS 50.0%
AGGCCAAAAAGGCAACTGAC+TGG + chr7_4:48910967-48910986 Msa1159300:CDS 50.0%
! CCTCCAGTCAGTTGCCTTTT+TGG - chr7_4:48910973-48910992 None:intergenic 50.0%
CCAAAAAGGCAACTGACTGG+AGG + chr7_4:48910970-48910989 Msa1159300:CDS 50.0%
GCAACTGACTGGAGGAGAAT+GGG + chr7_4:48910978-48910997 Msa1159300:CDS 50.0%
GCTTACGGTGTGATTGCAAG+CGG + chr7_4:48911127-48911146 Msa1159300:CDS 50.0%
GCGGCCTGGACAAATATCTT+TGG + chr7_4:48911146-48911165 Msa1159300:CDS 50.0%
CCCTGGATGTGATGTGGTAT+TGG - chr7_4:48911178-48911197 None:intergenic 50.0%
ACCACATCACATCCAGGGTA+TGG + chr7_4:48911180-48911199 Msa1159300:CDS 50.0%
TCCATACCCTGGATGTGATG+TGG - chr7_4:48911184-48911203 None:intergenic 50.0%
! ATGAAGAGAAGGCACGACGT+TGG + chr7_4:48911253-48911272 Msa1159300:CDS 50.0%
!! GGCACGACGTTGGTTTAACA+AGG + chr7_4:48911263-48911282 Msa1159300:CDS 50.0%
TGAGGAAAACTCCACTGGAG+AGG + chr7_4:48911391-48911410 Msa1159300:CDS 50.0%
AGCCAAGTCTCGTGATACTC+TGG + chr7_4:48911494-48911513 Msa1159300:CDS 50.0%
! GTCCAGAGTATCACGAGACT+TGG - chr7_4:48911499-48911518 None:intergenic 50.0%
ACTGTCAGTGTCACCAGAAC+TGG - chr7_4:48911688-48911707 None:intergenic 50.0%
!! ATGCTGGTGTTGTCAAGGAC+CGG - chr7_4:48911917-48911936 None:intergenic 50.0%
! TCTGGGGGAAAGGGTACAAA+GGG - chr7_4:48911987-48912006 None:intergenic 50.0%
! ATCTGGGGGAAAGGGTACAA+AGG - chr7_4:48911988-48912007 None:intergenic 50.0%
GGCAAAGTAATCTGGGGGAA+AGG - chr7_4:48911997-48912016 None:intergenic 50.0%
CTCAGTCCCTTCAGATACTG+AGG - chr7_4:48912081-48912100 None:intergenic 50.0%
TCTGAAGGGACTGAGATGTC+AGG + chr7_4:48912086-48912105 Msa1159300:CDS 50.0%
ATCTGATCAGAAGGAGGTCC+TGG - chr7_4:48912140-48912159 None:intergenic 50.0%
ACTTATGCGGCTTCAAGCAG+TGG + chr7_4:48912188-48912207 Msa1159300:CDS 50.0%
GTTCTCAGATGCTGAACCTG+TGG - chr7_4:48912270-48912289 None:intergenic 50.0%
GCATCTGAGAACCAGAGTGT+TGG + chr7_4:48912278-48912297 Msa1159300:CDS 50.0%
TTTAGAGGGATCAGCGGTCA+GGG + chr7_4:48912322-48912341 Msa1159300:CDS 50.0%
GGATCCTTTGGATATGTCCG+AGG + chr7_4:48912349-48912368 Msa1159300:CDS 50.0%
TCCTTTGGATATGTCCGAGG+AGG + chr7_4:48912352-48912371 Msa1159300:CDS 50.0%
CCGTCGTGTTGCCCAAATTA+AGG + chr7_4:48912394-48912413 Msa1159300:CDS 50.0%
CTGTTCACCCCTTTACGCAT+AGG - chr7_4:48912470-48912489 None:intergenic 50.0%
AGCGGAAAACACCACTGGAA+AGG + chr7_4:48912504-48912523 Msa1159300:CDS 50.0%
ACAGGATCTGAGCTCACAAC+TGG - chr7_4:48912563-48912582 None:intergenic 50.0%
GAAGATGAACCTTGGGGAGG+CGG - chr7_4:48907701-48907720 None:intergenic 55.0%
CCAGTGAGGGGAGATTGTGA+AGG - chr7_4:48907895-48907914 None:intergenic 55.0%
CCTTCACAATCTCCCCTCAC+TGG + chr7_4:48907892-48907911 Msa1159300:CDS 55.0%
!! CAAGCACTGACTTCAGCCTG+CGG - chr7_4:48908018-48908037 None:intergenic 55.0%
GATCAGAGACGTTGCCGTTG+TGG + chr7_4:48908170-48908189 Msa1159300:CDS 55.0%
GTAGGCTACTGGGTGAGTAG+GGG + chr7_4:48908915-48908934 Msa1159300:intron 55.0%
TAGGCTACTGGGTGAGTAGG+GGG + chr7_4:48908916-48908935 Msa1159300:intron 55.0%
GGGGGATTGGGTAACTCAAC+TGG - chr7_4:48909553-48909572 None:intergenic 55.0%
GGCAACTGACTGGAGGAGAA+TGG + chr7_4:48910977-48910996 Msa1159300:CDS 55.0%
GGAAAACTCCACTGGAGAGG+AGG + chr7_4:48911394-48911413 Msa1159300:CDS 55.0%
TTGGTCAACCTCCTCTCCAG+TGG - chr7_4:48911405-48911424 None:intergenic 55.0%
TAACGACGCTCCCGAAGTTG+AGG + chr7_4:48911452-48911471 Msa1159300:CDS 55.0%
CGTTTGGCCATGGAGCAATC+TGG + chr7_4:48911945-48911964 Msa1159300:CDS 55.0%
! CTGGGGGAAAGGGTACAAAG+GGG - chr7_4:48911986-48912005 None:intergenic 55.0%
GCTAGACCTGAACAGAGTCC+AGG + chr7_4:48912119-48912138 Msa1159300:CDS 55.0%
CTGACCGAGAGTTCATCCAC+AGG + chr7_4:48912251-48912270 Msa1159300:CDS 55.0%
GTTTAGAGGGATCAGCGGTC+AGG + chr7_4:48912321-48912340 Msa1159300:CDS 55.0%
GCCTCCTCGGACATATCCAA+AGG - chr7_4:48912356-48912375 None:intergenic 55.0%
GGATATGTCCGAGGAGGCAA+AGG + chr7_4:48912358-48912377 Msa1159300:CDS 55.0%
GAGCAAGCGGAAAACACCAC+TGG + chr7_4:48912499-48912518 Msa1159300:CDS 55.0%
CCTCCTCCGGCAAAAATGGG+CGG + chr7_4:48907673-48907692 Msa1159300:exon 60.0%
GGAGACGGATATTGTGGCGG+AGG - chr7_4:48907726-48907745 None:intergenic 60.0%
!! TGGATGGTGGGTCCCAGTGA+GGG - chr7_4:48907908-48907927 None:intergenic 60.0%
!! ATGGATGGTGGGTCCCAGTG+AGG - chr7_4:48907909-48907928 None:intergenic 60.0%
TCACTGGGACCCACCATCCA+TGG + chr7_4:48907908-48907927 Msa1159300:CDS 60.0%
CTCTCACACATCTCCTCCGC+CGG + chr7_4:48907949-48907968 Msa1159300:CDS 60.0%
TGGGAGGAAAACCATCGGCG+GGG - chr7_4:48907984-48908003 None:intergenic 60.0%
GTGGGAGGAAAACCATCGGC+GGG - chr7_4:48907985-48908004 None:intergenic 60.0%
GGTGGGAGGAAAACCATCGG+CGG - chr7_4:48907986-48908005 None:intergenic 60.0%
! GCCGATGGTTTTCCTCCCAC+CGG + chr7_4:48907985-48908004 Msa1159300:CDS 60.0%
GCCGGTGGGAGGAAAACCAT+CGG - chr7_4:48907989-48908008 None:intergenic 60.0%
TTCAGCCTGCGGCAATTCGC+CGG - chr7_4:48908007-48908026 None:intergenic 60.0%
!! GGGTGAGTAGGGGGTGCTTT+AGG + chr7_4:48908925-48908944 Msa1159300:intron 60.0%
TCGCTCTGGCGGCAGTTCTA+TGG - chr7_4:48909178-48909197 None:intergenic 60.0%
GGAGGTCCTGGACTCTGTTC+AGG - chr7_4:48912128-48912147 None:intergenic 60.0%
GGTCAGGGAACCGGATCCTT+TGG + chr7_4:48912337-48912356 Msa1159300:CDS 60.0%
CCTCTCTGCCTTTGCCTCCT+CGG - chr7_4:48912369-48912388 None:intergenic 60.0%
AGGAGGCAAAGGCAGAGAGG+TGG + chr7_4:48912369-48912388 Msa1159300:CDS 60.0%
!! CCGCCCATTTTTGCCGGAGG+AGG - chr7_4:48907676-48907695 None:intergenic 65.0%
!! GGATGGTGGGTCCCAGTGAG+GGG - chr7_4:48907907-48907926 None:intergenic 65.0%
ATCGGCGGGGGATGTGTAGC+CGG - chr7_4:48907971-48907990 None:intergenic 65.0%
GGGAGGAAAACCATCGGCGG+GGG - chr7_4:48907983-48908002 None:intergenic 65.0%
CGGTGTGATTGCAAGCGGCC+TGG + chr7_4:48911132-48911151 Msa1159300:CDS 65.0%
GGGATCAGCGGTCAGGGAAC+CGG + chr7_4:48912328-48912347 Msa1159300:CDS 65.0%
CCGAGGAGGCAAAGGCAGAG+AGG + chr7_4:48912366-48912385 Msa1159300:CDS 65.0%
!! GCGCCGCCCATTTTTGCCGG+AGG - chr7_4:48907679-48907698 None:intergenic 70.0%
!! GCGGCGCCGCCCATTTTTGC+CGG - chr7_4:48907682-48907701 None:intergenic 70.0%
GGCTACACATCCCCCGCCGA+TGG + chr7_4:48907970-48907989 Msa1159300:CDS 70.0%
TGCGGCAATTCGCCGGTGGG+AGG - chr7_4:48908000-48908019 None:intergenic 70.0%
TCCCACCGGCGAATTGCCGC+AGG + chr7_4:48907999-48908018 Msa1159300:CDS 70.0%
GCCTGCGGCAATTCGCCGGT+GGG - chr7_4:48908003-48908022 None:intergenic 70.0%
AGCCTGCGGCAATTCGCCGG+TGG - chr7_4:48908004-48908023 None:intergenic 70.0%
GGGGGATGTGTAGCCGGCGG+AGG - chr7_4:48907965-48907984 None:intergenic 75.0%
GGCGGGGGATGTGTAGCCGG+CGG - chr7_4:48907968-48907987 None:intergenic 75.0%
! TGGGCGGCGCCGCCTCCCCA+AGG + chr7_4:48907689-48907708 Msa1159300:CDS 85.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 48907470 48912907 48907470 ID=Msa1159300;Name=Msa1159300
chr7_4 mRNA 48907470 48912907 48907470 ID=Msa1159300-mRNA-1;Parent=Msa1159300;Name=Msa1159300-mRNA-1;_AED=0.06;_eAED=0.06;_QI=218|1|1|1|1|1|5|300|800
chr7_4 exon 48907470 48908073 48907470 ID=Msa1159300-mRNA-1:exon:13329;Parent=Msa1159300-mRNA-1
chr7_4 exon 48908161 48908278 48908161 ID=Msa1159300-mRNA-1:exon:13330;Parent=Msa1159300-mRNA-1
chr7_4 exon 48910452 48910735 48910452 ID=Msa1159300-mRNA-1:exon:13331;Parent=Msa1159300-mRNA-1
chr7_4 exon 48910912 48911010 48910912 ID=Msa1159300-mRNA-1:exon:13332;Parent=Msa1159300-mRNA-1
chr7_4 exon 48911092 48912907 48911092 ID=Msa1159300-mRNA-1:exon:13333;Parent=Msa1159300-mRNA-1
chr7_4 five_prime_UTR 48907470 48907687 48907470 ID=Msa1159300-mRNA-1:five_prime_utr;Parent=Msa1159300-mRNA-1
chr7_4 CDS 48907688 48908073 48907688 ID=Msa1159300-mRNA-1:cds;Parent=Msa1159300-mRNA-1
chr7_4 CDS 48908161 48908278 48908161 ID=Msa1159300-mRNA-1:cds;Parent=Msa1159300-mRNA-1
chr7_4 CDS 48910452 48910735 48910452 ID=Msa1159300-mRNA-1:cds;Parent=Msa1159300-mRNA-1
chr7_4 CDS 48910912 48911010 48910912 ID=Msa1159300-mRNA-1:cds;Parent=Msa1159300-mRNA-1
chr7_4 CDS 48911092 48912607 48911092 ID=Msa1159300-mRNA-1:cds;Parent=Msa1159300-mRNA-1
chr7_4 three_prime_UTR 48912608 48912907 48912608 ID=Msa1159300-mRNA-1:three_prime_utr;Parent=Msa1159300-mRNA-1
Gene Sequence

>Msa1159300

ATGGGCGGCGCCGCCTCCCCAAGGTTCATCTTCTTCCTCCGCCACAATATCCGTCTCCTCTCTCCCTCTTTCTCCTTTCATTTCCACCACCGCACTCTCTTTTCTTCATTCACTCGCTCTCCTACTTCTTCTTCTTCTCTCACACCAAAACTCAAACTCAAAGCCTCACAACACCACCAACAACAACAACACATTCACACCCAACCTTCACAATCTCCCCTCACTGGGACCCACCATCCATGGCCAGAATTTTCCAGATTTCTCTCACACATCTCCTCCGCCGGCTACACATCCCCCGCCGATGGTTTTCCTCCCACCGGCGAATTGCCGCAGGCTGAAGTCAGTGCTTGCTTGTCTTTCGCTCGAGATAGACCTAACCTTCTCAGGTTGCTTTCGATCAGAGACGTTGCCGTTGTGGTTGAACATGGTACTCCGTTTATGTTCTCCGACTCGCAGGATTCTGTTTCCAAGATGAAGTCTTTTCTATCCAACGGTGACTCCACTGCCTTGGACTCTGATAAAGCAAATATGGTTGATCTGATGAAATTTATGCTGAGTTATGCAAGTAGCTGCTTGGTCTCTTCAGAAAGGAACAATCTTTATAACAGAAATCTTGTTGAATCCTCCATCAGAAACCTATTTGGTGAACTTTTCAAGCTGAGTTATAGTACACCTGGACCCAACTCTTTTGATTCAGTGCAAAATCAAATACCTGGTGGTAGATTTGAGCGTACAATGCCTCCCGGACAAAACATTGAAATGAAAAGGGGTGATTGGATTTGCCTAAGGTGTAGTTTCATGAATTTTGCAAGAAATATGAAATGTCTTGAATGTGAAGAAGCAAGGCCAAAAAGGCAACTGACTGGAGGAGAATGGGAATGTCCTCAGTGTGATTTTCATAATTATGGGAGGAATGTAGCTTGCTTACGGTGTGATTGCAAGCGGCCTGGACAAATATCTTTGGGTTCCACCAATACCACATCACATCCAGGGTATGGAAATGTAAACCATTCTAATACTTCAGATATTGATGCTAGGTTGGTGGCTAATGAAGAGAAGGCACGACGTTGGTTTAACAAGGTTTCTCAACTAGACAGCAACTCTGATATTAACAGTGTGATACATGATGAAGATTTTCCGGAAATAATGCCGTTAAGGAAAGGAGTTAATAGATTTGTTGTAAGCATGAGGAAAACTCCACTGGAGAGGAGGTTGACCAATGCTCAATACAAGAGAAGCTTGGGAAATAACGACGCTCCCGAAGTTGAGGACTATAAAACTGGGGAGTCAGCCAAGTCTCGTGATACTCTGGACGACATTCTAGGTCGTTCAACTGGCCCTCCTCGATCTGACTACAAAAACATGGGTGCTGAACAAAATTTCAGTGGAGAAAGACAACCGTCAATTGCTAGCAATACATCACATTTCCAAGACGTGAAAGGGAACAACACTAATACTCTTTCCCCTTTTCCATCATATGCCAGTTCTGGTGACACTGACAGTACACAACTTTCTAATAACTTTTCAAGTGAAAATGTCATCAAGGACAAAGAGAGTGAGCAAGCTGAAAAATCTGATAGATGGTTTAGAAAGATTGCGGAGCTGAATGATGTTCCAGATATAACAAGTGCAATATCCGATGATGATTTCCCTGAAATGATGCCAATGCGTAAAGGAGAAAATCGATTTGTTGTTAGCAAGAAAAAGGACCGGTCCTTGACAACACCAGCATATAAGAGACGTTTGGCCATGGAGCAATCTGGTAATACTAACTTTGTCCCCTTTGTACCCTTTCCCCCAGATTACTTTGCCAAAAAGGAAAAACCACAGGCAGATGGAACAAATTCAACAGACAGGTCCAGTGTTGAATCATCCTCAGTATCTGAAGGGACTGAGATGTCAGGTGATGCTACAGCTAGACCTGAACAGAGTCCAGGACCTCCTTCTGATCAGATCTCAAGTAAAAACAATCATATTGGTTCTACTTATGCGGCTTCAAGCAGTGGAAATTCAAGTCAGGATTTCAATCAAGATCATGTGCCAAATCTGACCGAGAGTTCATCCACAGGTTCAGCATCTGAGAACCAGAGTGTTGGAACAGAATGGTCAGGGAAAAGTTTAGAGGGATCAGCGGTCAGGGAACCGGATCCTTTGGATATGTCCGAGGAGGCAAAGGCAGAGAGGTGGTTCCGTCGTGTTGCCCAAATTAAGGATATTTCTGAGCTCAGTCAGATTCCAGACGAAGATTTTCCTTCAATAATGCCTATGCGTAAAGGGGTGAACAGATTCGTTGTGAGCAAGCGGAAAACACCACTGGAAAGGAGATTGACATCTCAGCAGTACCGAAGAAATCTTCCAGTTGTGAGCTCAGATCCTGTCAAGAGAGAAAATGAAGGTAGCTGA
Protein sequence

>Msa1159300

MGGAASPRFIFFLRHNIRLLSPSFSFHFHHRTLFSSFTRSPTSSSSLTPKLKLKASQHHQQQQHIHTQPSQSPLTGTHHPWPEFSRFLSHISSAGYTSPADGFPPTGELPQAEVSACLSFARDRPNLLRLLSIRDVAVVVEHGTPFMFSDSQDSVSKMKSFLSNGDSTALDSDKANMVDLMKFMLSYASSCLVSSERNNLYNRNLVESSIRNLFGELFKLSYSTPGPNSFDSVQNQIPGGRFERTMPPGQNIEMKRGDWICLRCSFMNFARNMKCLECEEARPKRQLTGGEWECPQCDFHNYGRNVACLRCDCKRPGQISLGSTNTTSHPGYGNVNHSNTSDIDARLVANEEKARRWFNKVSQLDSNSDINSVIHDEDFPEIMPLRKGVNRFVVSMRKTPLERRLTNAQYKRSLGNNDAPEVEDYKTGESAKSRDTLDDILGRSTGPPRSDYKNMGAEQNFSGERQPSIASNTSHFQDVKGNNTNTLSPFPSYASSGDTDSTQLSNNFSSENVIKDKESEQAEKSDRWFRKIAELNDVPDITSAISDDDFPEMMPMRKGENRFVVSKKKDRSLTTPAYKRRLAMEQSGNTNFVPFVPFPPDYFAKKEKPQADGTNSTDRSSVESSSVSEGTEMSGDATARPEQSPGPPSDQISSKNNHIGSTYAASSSGNSSQDFNQDHVPNLTESSSTGSASENQSVGTEWSGKSLEGSAVREPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPVVSSDPVKRENEGS*