AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1032510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1032510 MtrunA17_Chr7g0254331 94.881 801 39 1 1 801 1 799 0.0 1504
Msa1032510 MtrunA17_Chr6g0478341 32.047 337 188 8 30 326 48 383 3.05e-39 152
Msa1032510 MtrunA17_Chr6g0478341 51.667 60 27 1 253 312 385 442 6.66e-16 81.6
Msa1032510 MtrunA17_Chr6g0478341 44.286 70 27 1 258 315 421 490 6.78e-13 72.0
Msa1032510 MtrunA17_Chr7g0272741 34.507 284 138 9 80 317 126 407 2.79e-36 147
Msa1032510 MtrunA17_Chr1g0161121 26.115 314 167 8 69 317 51 364 1.31e-32 132
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1032510 AT5G17790.1 45.298 755 274 23 83 793 93 752 0.0 557
Msa1032510 AT1G55040.1 36.250 240 118 6 112 322 204 437 1.81e-35 145
Msa1032510 AT1G48570.1 30.053 376 177 15 36 335 24 389 4.21e-28 119
Msa1032510 AT1G48570.1 56.716 67 29 0 253 319 373 439 1.95e-19 92.4
Msa1032510 AT1G70650.1 25.902 305 149 7 80 316 44 339 8.72e-28 118
Msa1032510 AT1G70650.2 25.902 305 149 7 80 316 44 339 3.23e-27 117

Find 231 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCAGAAATATCCTTAATT+TGG 0.135919 7_1:-67463455 None:intergenic
TTACGCATTGGCATCATTTC+AGG 0.187358 7_1:-67462904 None:intergenic
CCCAGATTACTTTGCCAAAA+AGG 0.192927 7_1:+67463050 Msa1032510:CDS
TTCCTTAACGGCATTATTTC+CGG 0.203024 7_1:-67462391 None:intergenic
TAGATTATAATTCCATTTCT+AGG 0.208659 7_1:-67463910 None:intergenic
CCGTCGTGTTGCCCAAATTA+AGG 0.248127 7_1:+67463443 Msa1032510:CDS
ATTTGTTGTTAGCAAGAAAA+AGG 0.255921 7_1:+67462939 Msa1032510:CDS
GGACTCTGATAAAGCAAATA+TGG 0.287841 7_1:+67461506 Msa1032510:CDS
GCTTGAAAAGTTCACCAAAT+AGG 0.289027 7_1:-67461632 None:intergenic
GATATTGCACTTGTTATATC+TGG 0.297268 7_1:-67462868 None:intergenic
CTATTAACTCCTTTCCTTAA+CGG 0.298170 7_1:-67462403 None:intergenic
TTTCCATCATATGCCAGTTC+TGG 0.308128 7_1:+67462721 Msa1032510:CDS
GATAGAAAACATGAAAATAT+TGG 0.313880 7_1:-67463882 None:intergenic
ATCTTGGTCCTAGGAAAATA+TGG 0.321905 7_1:+67458653 Msa1032510:five_prime_UTR
ATTGATTCAATTCAATATCT+TGG 0.326668 7_1:+67458637 Msa1032510:five_prime_UTR
TCCTCCGTCAGAAACCTATT+TGG 0.327134 7_1:+67461618 Msa1032510:CDS
TGTTGTTCCCTTTCACATCT+TGG 0.329907 7_1:-67462681 None:intergenic
GCGGCCTGGACAAATATCTT+TGG 0.332575 7_1:+67462195 Msa1032510:CDS
GAAGTTGAGGACTATAAAAC+TGG 0.335316 7_1:+67462514 Msa1032510:CDS
GAATTATAATCTAGTTTCTA+TGG 0.338478 7_1:+67463920 Msa1032510:three_prime_UTR
TTCTATCTTGATCCTAGAAA+TGG 0.345139 7_1:+67463898 Msa1032510:three_prime_UTR
CTCAGAAATATCCTTAATTT+GGG 0.345174 7_1:-67463454 None:intergenic
ATCTGATCAGAAGGAGGTCC+TGG 0.356751 7_1:-67463186 None:intergenic
TTGAAATGAAAAGGGGTGAT+TGG 0.359169 7_1:+67461751 Msa1032510:CDS
CCCTTTGATTGATTTCATAT+TGG 0.360934 7_1:+67463811 Msa1032510:three_prime_UTR
GGAGGTCCTGGACTCTGTTC+AGG 0.361319 7_1:-67463174 None:intergenic
CAATAATGCCTATGCGTAAA+GGG 0.362210 7_1:+67463508 Msa1032510:CDS
GTGAAGAAGCAAGGCCAAAA+AGG 0.372468 7_1:+67462005 Msa1032510:CDS
TTCCGGAAATAATGCCGTTA+AGG 0.373924 7_1:+67462389 Msa1032510:CDS
GATACTCTGGACGACATTCT+AGG 0.385372 7_1:+67462556 Msa1032510:CDS
CCTCTCTGCCTTTGCCTCCT+CGG 0.388207 7_1:-67463415 None:intergenic
GATGAACTCTCGGTCAGATT+TGG 0.390607 7_1:-67463294 None:intergenic
CGGCCTGGACAAATATCTTT+GGG 0.398174 7_1:+67462196 Msa1032510:CDS
GACAAAACATTGAAATGAAA+AGG 0.402732 7_1:+67461742 Msa1032510:CDS
CTATGGTCGACTTGTTAAGT+AGG 0.406316 7_1:+67463937 Msa1032510:three_prime_UTR
ACAGGATCTGAGCTCACAAC+TGG 0.410741 7_1:-67463609 None:intergenic
CCCTGGATGTGATGTGGTAT+TGG 0.414060 7_1:-67462224 None:intergenic
TGAATTGAATCAATTTAAAC+CGG 0.416617 7_1:-67458628 None:intergenic
TTCTTCACTTCATCCTCCTC+CGG 0.417358 7_1:+67458609 Msa1032510:five_prime_UTR
GACATTCTAGGTCGTTCAAC+TGG 0.418769 7_1:+67462568 Msa1032510:CDS
GGAGGAAGAAGATGAACCTT+GGG 0.419366 7_1:-67458752 None:intergenic
GTAAAACAAGTGTGGTCATT+TGG 0.420650 7_1:-67458549 None:intergenic
GAGGCTTTGAGTTTGAGTTT+TGG 0.424888 7_1:-67458882 None:intergenic
GGGTGTGAATGTGTTGTTGT+TGG 0.425477 7_1:-67458917 None:intergenic
GAGATAGACCTAACCTTCTC+AGG 0.427165 7_1:+67459102 Msa1032510:CDS
TTTACCAGCAATTATACAAA+AGG 0.429619 7_1:+67463692 Msa1032510:three_prime_UTR
TGCACTGAATCAAAAGAGTT+GGG 0.431070 7_1:-67461675 None:intergenic
GTTTAGAGGGATCAGCGGTC+AGG 0.435485 7_1:+67463370 Msa1032510:CDS
GGGATCAGCGGTCAGGGAAC+CGG 0.437067 7_1:+67463377 Msa1032510:CDS
GGTCAGGGAACCGGATCCTT+TGG 0.443328 7_1:+67463386 Msa1032510:CDS
GCTCAATACAAGAGAAGCTT+GGG 0.444015 7_1:+67462475 Msa1032510:CDS
GGAGATGTGTGAGAGAAATC+TGG 0.445834 7_1:-67458991 None:intergenic
CCAATATGAAATCAATCAAA+GGG 0.447824 7_1:-67463811 None:intergenic
TTGCACTGAATCAAAAGAGT+TGG 0.448066 7_1:-67461676 None:intergenic
CAATTCAATATCTTGGTCCT+AGG 0.448183 7_1:+67458644 Msa1032510:five_prime_UTR
GAAACAAACCTGAGAAGGTT+AGG 0.449010 7_1:-67459110 None:intergenic
GTGGAAATGAGAGGAGAAAG+AGG 0.449844 7_1:-67458799 None:intergenic
GATTGATTTCATATTGGAGA+TGG 0.452218 7_1:+67463817 Msa1032510:three_prime_UTR
ACAAAACATTGAAATGAAAA+GGG 0.453499 7_1:+67461743 Msa1032510:CDS
ACTGTCAGTGTCACCAGAAC+TGG 0.456993 7_1:-67462734 None:intergenic
AAGAAAAGAGAGTGCGGTGG+TGG 0.457611 7_1:-67458818 None:intergenic
CGGTGTGATTGCAAGCGGCC+TGG 0.461676 7_1:+67462181 Msa1032510:CDS
AGAAAGAGGGAGAGAGGAGA+CGG 0.463077 7_1:-67458785 None:intergenic
AACTGGCATATGATGGAAAA+GGG 0.463133 7_1:-67462717 None:intergenic
GGGAGGAAAACCATCGGCGG+GGG 0.465893 7_1:-67459030 None:intergenic
GAGAGGAGAAAGAGGGAGAG+AGG 0.466377 7_1:-67458791 None:intergenic
GAACTGGCATATGATGGAAA+AGG 0.466654 7_1:-67462718 None:intergenic
TGGATGGTGGGTTCCACTGA+GGG 0.467082 7_1:-67458955 None:intergenic
ATTGAAGGAAAATCTTCGTC+TGG 0.470173 7_1:-67463489 None:intergenic
GAAGATGAACCTTGGGGAGG+CGG 0.470465 7_1:-67458745 None:intergenic
TCAATAATGCCTATGCGTAA+AGG 0.470741 7_1:+67463507 Msa1032510:CDS
AGTGTTGGAACAGAATGGTC+AGG 0.471195 7_1:+67463342 Msa1032510:CDS
ATTGATTTCATATTGGAGAT+GGG 0.474580 7_1:+67463818 Msa1032510:three_prime_UTR
ACCATTCTGTTCCAACACTC+TGG 0.475255 7_1:-67463338 None:intergenic
TACGCATTGGCATCATTTCA+GGG 0.476436 7_1:-67462903 None:intergenic
GAGGGGAGATTGTGAAGGTT+GGG 0.478243 7_1:-67458937 None:intergenic
TTCAGCCTGCGGCAATTCGC+CGG 0.479711 7_1:-67459054 None:intergenic
TCACAACTGGAAGATTTCTT+CGG 0.480004 7_1:-67463596 None:intergenic
ACCAATACCACATCACATCC+AGG 0.486464 7_1:+67462223 Msa1032510:CDS
TGATCTATCTCAGCCTCCTC+CGG 0.486482 7_1:+67458707 Msa1032510:five_prime_UTR
TGCTCAATACAAGAGAAGCT+TGG 0.486677 7_1:+67462474 Msa1032510:CDS
GGCAACTGACTGGAGGAGAA+TGG 0.487351 7_1:+67462026 Msa1032510:CDS
GTTTATGTTCTCCGACTCGC+AGG 0.489402 7_1:+67459259 Msa1032510:CDS
TTCAAGTGAAAATGTCATCA+AGG 0.490105 7_1:+67462777 Msa1032510:CDS
TTCAGATATTGATGCTAGGT+TGG 0.491453 7_1:+67462273 Msa1032510:CDS
GCTTCTCTTGTATTGAGCAT+TGG 0.492874 7_1:-67462470 None:intergenic
TCCAATATGAAATCAATCAA+AGG 0.495744 7_1:-67463812 None:intergenic
GATCAGAGACGTTGCCGTTG+TGG 0.495844 7_1:+67459220 Msa1032510:CDS
CACATTTCCAAGATGTGAAA+GGG 0.498595 7_1:+67462674 Msa1032510:CDS
GGATAGAAAAGACTTCATCT+TGG 0.498656 7_1:-67459291 None:intergenic
AAGCAGTGGAAATTCAAGTC+AGG 0.499382 7_1:+67463251 Msa1032510:CDS
AGCCAAGTCTCGTGATACTC+TGG 0.500292 7_1:+67462543 Msa1032510:CDS
GCAACTGACTGGAGGAGAAT+GGG 0.501796 7_1:+67462027 Msa1032510:CDS
GCCAAACGTCTCTTATATGC+TGG 0.505054 7_1:-67462979 None:intergenic
TGTGAATGTGTTGTTGTTGG+TGG 0.505829 7_1:-67458914 None:intergenic
TCCCACCGGCGAATTGCCGC+AGG 0.507515 7_1:+67459049 Msa1032510:CDS
GAATCAAAAGAGTTGGGTCC+AGG 0.510866 7_1:-67461669 None:intergenic
AAAACTCTGGCCATGGATGG+TGG 0.511046 7_1:-67458968 None:intergenic
CTTATATGCTGGTGTTGTCA+AGG 0.513833 7_1:-67462968 None:intergenic
TGCGAGTCGGAGAACATAAA+CGG 0.516634 7_1:-67459257 None:intergenic
GAATCAATTTAAACCGGAGG+AGG 0.516920 7_1:-67458622 None:intergenic
GAATGTGTTGTTGTTGGTGG+TGG 0.517492 7_1:-67458911 None:intergenic
CGGAGGAAGAAGATGAACCT+TGG 0.517525 7_1:-67458753 None:intergenic
CTCTCACACATCTCCTCCGC+CGG 0.517890 7_1:+67458999 Msa1032510:CDS
CAATATCTGAAGTATTAGAA+TGG 0.519472 7_1:-67462261 None:intergenic
GTGGGAGGAAAACCATCGGC+GGG 0.523503 7_1:-67459032 None:intergenic
GAACCCAAAGATATTTGTCC+AGG 0.524396 7_1:-67462199 None:intergenic
TGAGGGGAGATTGTGAAGGT+TGG 0.524706 7_1:-67458938 None:intergenic
TTATTTATCTATCTTTGTTG+AGG 0.527136 7_1:+67463787 Msa1032510:three_prime_UTR
TTACGCATAGGCATTATTGA+AGG 0.527364 7_1:-67463504 None:intergenic
AGCCTGCGGCAATTCGCCGG+TGG 0.529196 7_1:-67459051 None:intergenic
TCACCAGAACTGGCATATGA+TGG 0.530430 7_1:-67462724 None:intergenic
ATGGATGGTGGGTTCCACTG+AGG 0.530473 7_1:-67458956 None:intergenic
ACTTATGCGGCTTCAAGCAG+TGG 0.530927 7_1:+67463237 Msa1032510:CDS
AGTGCGGTGGTGGAAATGAG+AGG 0.532561 7_1:-67458808 None:intergenic
GGAGGAATGTAGCTTGCTTA+CGG 0.533335 7_1:+67462161 Msa1032510:CDS
CGTTTGGCCATGGAGCAATC+TGG 0.534177 7_1:+67462994 Msa1032510:CDS
TGGTTTACATTTCCATACCC+TGG 0.534908 7_1:-67462241 None:intergenic
ACCAGCATATAAGAGACGTT+TGG 0.535648 7_1:+67462978 Msa1032510:CDS
ACCACATCACATCCAGGGTA+TGG 0.536955 7_1:+67462229 Msa1032510:CDS
ATAGATTTGTTGTAAGCATG+AGG 0.537578 7_1:+67462422 Msa1032510:CDS
TAACGACGCTCCCGAAGTTG+AGG 0.538314 7_1:+67462501 Msa1032510:CDS
ATTTGCTTTATCAGAGTCCA+AGG 0.538585 7_1:-67461502 None:intergenic
ATGGTCAGGGAAAAGTTTAG+AGG 0.539489 7_1:+67463356 Msa1032510:CDS
GTGTGGTCATTTGGAAGTCA+AGG 0.542362 7_1:-67458540 None:intergenic
AGATATTGATGCTAGGTTGG+TGG 0.542575 7_1:+67462276 Msa1032510:CDS
TCGGACATATCCAAAGGATC+CGG 0.542933 7_1:-67463396 None:intergenic
GGGGTGATTGGATTTGCCTA+AGG 0.543193 7_1:+67461763 Msa1032510:CDS
TGGAAATGAGAGGAGAAAGA+GGG 0.544818 7_1:-67458798 None:intergenic
TTGTTGGTGGTGGTGTTGTG+AGG 0.548084 7_1:-67458901 None:intergenic
ACCAAATAGGTTTCTGACGG+AGG 0.548232 7_1:-67461619 None:intergenic
GATGTATTGCTAGCAATTGA+CGG 0.549547 7_1:-67462652 None:intergenic
GGATATGTCCGAGGAGGCAA+AGG 0.549802 7_1:+67463407 Msa1032510:CDS
TCATATTGGTTCTACTTATG+CGG 0.551263 7_1:+67463224 Msa1032510:CDS
GAAATAATGCCGTTAAGGAA+AGG 0.552070 7_1:+67462394 Msa1032510:CDS
TCAGTGGAACCCACCATCCA+TGG 0.555921 7_1:+67458958 Msa1032510:CDS
TTACTTGAGATCTGATCAGA+AGG 0.556039 7_1:-67463195 None:intergenic
AAGCATGAGGAAAACTCCAC+TGG 0.556439 7_1:+67462435 Msa1032510:CDS
ATACTTCAGATATTGATGCT+AGG 0.557119 7_1:+67462269 Msa1032510:CDS
GGTGGGAGGAAAACCATCGG+CGG 0.557256 7_1:-67459033 None:intergenic
TTTAGAGGGATCAGCGGTCA+GGG 0.557816 7_1:+67463371 Msa1032510:CDS
AATCTGGAAAACTCTGGCCA+TGG 0.559800 7_1:-67458975 None:intergenic
TCACATTTCCAAGATGTGAA+AGG 0.564003 7_1:+67462673 Msa1032510:CDS
GAGAGAGGAGACGGATATTG+TGG 0.564727 7_1:-67458776 None:intergenic
TGGGCGGCGCCGCCTCCCCA+AGG 0.564760 7_1:+67458736 Msa1032510:CDS
GGAGACGGATATTGTGGCGG+AGG 0.564843 7_1:-67458770 None:intergenic
AAGCTGAGTTATAGTACACC+TGG 0.564865 7_1:+67461651 Msa1032510:CDS
GAAATGATGCCAATGCGTAA+AGG 0.565143 7_1:+67462907 Msa1032510:CDS
TCTGAAGGGACTGAGATGTC+AGG 0.566228 7_1:+67463135 Msa1032510:CDS
GTCTTGAATGTGAAGAAGCA+AGG 0.567791 7_1:+67461996 Msa1032510:CDS
ACAAAAGGAAAATGAAGATG+TGG 0.568246 7_1:+67463707 Msa1032510:three_prime_UTR
GAATCATCCTCAGTATCTGA+AGG 0.568311 7_1:+67463120 Msa1032510:CDS
CTGTTCACCCCTTTACGCAT+AGG 0.569750 7_1:-67463516 None:intergenic
AGCGGAAAACACCACTGGAA+AGG 0.571776 7_1:+67463553 Msa1032510:CDS
TGCGGCAATTCGCCGGTGGG+AGG 0.572932 7_1:-67459047 None:intergenic
TTGATTTCATATTGGAGATG+GGG 0.574357 7_1:+67463819 Msa1032510:three_prime_UTR
GTTCTCAGATGCTGAACCTG+TGG 0.575630 7_1:-67463316 None:intergenic
GAGCAAGCGGAAAACACCAC+TGG 0.575777 7_1:+67463548 Msa1032510:CDS
ACCAGAGTGTTGGAACAGAA+TGG 0.576410 7_1:+67463337 Msa1032510:CDS
GGCACGACGTTGGTTTAACA+AGG 0.578881 7_1:+67462312 Msa1032510:CDS
TTCACCAAATAGGTTTCTGA+CGG 0.579635 7_1:-67461622 None:intergenic
GCATCTGAGAACCAGAGTGT+TGG 0.579809 7_1:+67463327 Msa1032510:CDS
AAACTCTGGCCATGGATGGT+GGG 0.580607 7_1:-67458967 None:intergenic
TGGAAAACTCTGGCCATGGA+TGG 0.581090 7_1:-67458971 None:intergenic
TGGTCAGGGAAAAGTTTAGA+GGG 0.581187 7_1:+67463357 Msa1032510:CDS
GCTAGACCTGAACAGAGTCC+AGG 0.581585 7_1:+67463168 Msa1032510:CDS
GAGAGAAATCTGGAAAACTC+TGG 0.581714 7_1:-67458981 None:intergenic
GAGTTATGCAAGTAGCTGCT+TGG 0.582628 7_1:+67461551 Msa1032510:CDS
TTGGTCAACCTCCTCTCCAG+TGG 0.584034 7_1:-67462451 None:intergenic
TGGATGTGATGTGGTATTGG+TGG 0.590402 7_1:-67462221 None:intergenic
GAATTTGTTCCATCTGCCTG+TGG 0.595417 7_1:-67463078 None:intergenic
ATATAAGAGACGTTTGGCCA+TGG 0.595895 7_1:+67462984 Msa1032510:CDS
ATGGAACAAATTCAACAGAC+AGG 0.596508 7_1:+67463088 Msa1032510:CDS
GTTGGTGGCTAATGAAGAGA+AGG 0.597342 7_1:+67462291 Msa1032510:CDS
ACAGATTCGTTGTGAGCAAG+CGG 0.598905 7_1:+67463535 Msa1032510:CDS
TGGGAGGAAAACCATCGGCG+GGG 0.599451 7_1:-67459031 None:intergenic
TCAGTGCAAAATCAAATACC+TGG 0.600487 7_1:+67461690 Msa1032510:CDS
CCTGTCAAGAGAGAAAATGA+AGG 0.601602 7_1:+67463627 Msa1032510:CDS
AAACAGAAACAAACCTGAGA+AGG 0.601875 7_1:-67459115 None:intergenic
TGAACCTGTGGATGAACTCT+CGG 0.602609 7_1:-67463304 None:intergenic
CATTTCAGGGAAATCATCAT+CGG 0.606138 7_1:-67462890 None:intergenic
CCTTAATTTGGGCAACACGA+CGG 0.610893 7_1:-67463443 None:intergenic
GCCTCCTCGGACATATCCAA+AGG 0.611688 7_1:-67463402 None:intergenic
GTCCAGAGTATCACGAGACT+TGG 0.612050 7_1:-67462545 None:intergenic
CTCAGTCCCTTCAGATACTG+AGG 0.612291 7_1:-67463127 None:intergenic
TTTGAGCGTACAATGCCTCC+CGG 0.614647 7_1:+67461720 Msa1032510:CDS
ACTAACAGTGGAGTCACCGT+TGG 0.614890 7_1:-67459312 None:intergenic
GCTGCTTGGTCTCTTCAGAA+AGG 0.615519 7_1:+67461565 Msa1032510:CDS
GTGTTGGAACAGAATGGTCA+GGG 0.616106 7_1:+67463343 Msa1032510:CDS
ATTGAATCAATTTAAACCGG+AGG 0.618081 7_1:-67458625 None:intergenic
GCTTACGGTGTGATTGCAAG+CGG 0.623530 7_1:+67462176 Msa1032510:CDS
TGAGGAAAACTCCACTGGAG+AGG 0.625101 7_1:+67462440 Msa1032510:CDS
TAGATGGTTTAGAAAGATTG+CGG 0.625827 7_1:+67462831 Msa1032510:CDS
AGTATTACCAGATTGCTCCA+TGG 0.627499 7_1:-67463001 None:intergenic
CCACTGAGGGGAGATTGTGA+AGG 0.627857 7_1:-67458942 None:intergenic
GCCGGTGGGAGGAAAACCAT+CGG 0.628392 7_1:-67459036 None:intergenic
GATGTCAATCTCCTTTCCAG+TGG 0.628941 7_1:-67463564 None:intergenic
CTTGAGATCTGATCAGAAGG+AGG 0.633242 7_1:-67463192 None:intergenic
AAGTTGAGGACTATAAAACT+GGG 0.634387 7_1:+67462515 Msa1032510:CDS
TACTGAGGATGATTCAACAC+TGG 0.638239 7_1:-67463112 None:intergenic
GGAAAACTCCACTGGAGAGG+AGG 0.638678 7_1:+67462443 Msa1032510:CDS
AGGAGGCAAAGGCAGAGAGG+TGG 0.639211 7_1:+67463418 Msa1032510:CDS
AATAATGCCTATGCGTAAAG+GGG 0.640140 7_1:+67463509 Msa1032510:CDS
GTTGCCGTTGTGGTTGAACA+TGG 0.640291 7_1:+67459230 Msa1032510:CDS
AATCATCCTCAGTATCTGAA+GGG 0.641884 7_1:+67463121 Msa1032510:CDS
ATGAAGAGAAGGCACGACGT+TGG 0.642250 7_1:+67462302 Msa1032510:CDS
CAAAACATTGAAATGAAAAG+GGG 0.644747 7_1:+67461744 Msa1032510:CDS
TTTATAGCGTAAAACAAGTG+TGG 0.646819 7_1:-67458557 None:intergenic
GGATGGTGGGTTCCACTGAG+GGG 0.647596 7_1:-67458954 None:intergenic
GGTGCTGAACAAAATTTCAG+TGG 0.648311 7_1:+67462619 Msa1032510:CDS
ACTGGCATATGATGGAAAAG+GGG 0.651966 7_1:-67462716 None:intergenic
CCAATACCACATCACATCCA+GGG 0.653487 7_1:+67462224 Msa1032510:CDS
CCTTCACAATCTCCCCTCAG+TGG 0.654918 7_1:+67458942 Msa1032510:CDS
CCGAGGAGGCAAAGGCAGAG+AGG 0.655109 7_1:+67463415 Msa1032510:CDS
GGAAACAGAATCCTGCGAGT+CGG 0.660654 7_1:-67459270 None:intergenic
TCCATACCCTGGATGTGATG+TGG 0.662623 7_1:-67462230 None:intergenic
TCCTTTGGATATGTCCGAGG+AGG 0.663246 7_1:+67463401 Msa1032510:CDS
CTGACCGAGAGTTCATCCAC+AGG 0.667426 7_1:+67463300 Msa1032510:CDS
GTACGCTCAAATCTACCACC+AGG 0.671074 7_1:-67461708 None:intergenic
AGAGGAGACGGATATTGTGG+CGG 0.674499 7_1:-67458773 None:intergenic
GGATCCTTTGGATATGTCCG+AGG 0.677529 7_1:+67463398 Msa1032510:CDS
GTGCAAAATCAAATACCTGG+TGG 0.682847 7_1:+67461693 Msa1032510:CDS
CAATATGAAATCAATCAAAG+GGG 0.687402 7_1:-67463810 None:intergenic
GAAGAAGATGAACCTTGGGG+AGG 0.689234 7_1:-67458748 None:intergenic
AGTACCATGTTCAACCACAA+CGG 0.691064 7_1:-67459234 None:intergenic
GAAAAGTTTAGAGGGATCAG+CGG 0.701326 7_1:+67463365 Msa1032510:CDS
TGAATGAAGAAAAGAGAGTG+CGG 0.704407 7_1:-67458824 None:intergenic
CAAGCACTGACTTCAGCCTG+CGG 0.720011 7_1:-67459065 None:intergenic
GAGGAAGAAGATGAACCTTG+GGG 0.727162 7_1:-67458751 None:intergenic
ATGAAGAAAAGAGAGTGCGG+TGG 0.745588 7_1:-67458821 None:intergenic
AGTTGAGGACTATAAAACTG+GGG 0.750422 7_1:+67462516 Msa1032510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCTAATTCATTTTAATAT+AGG + chr7_1:67459189-67459208 Msa1032510:intron 10.0%
!!! AATATAAAATAAAGTTGATT+TGG + chr7_1:67459418-67459437 Msa1032510:intron 10.0%
!! AAACAAAAAAATAAATAGAA+GGG - chr7_1:67460001-67460020 None:intergenic 10.0%
!!! AACTATTTGTTTTTTTTTAA+TGG + chr7_1:67460489-67460508 Msa1032510:intron 10.0%
!! AACAAAAAAATAAATAGAAG+GGG - chr7_1:67460000-67460019 None:intergenic 15.0%
!! CAAACAAAAAAATAAATAGA+AGG - chr7_1:67460002-67460021 None:intergenic 15.0%
!! AATAAATTAATAGAAGCTTA+AGG - chr7_1:67460132-67460151 None:intergenic 15.0%
!! CAATAAACAATAACAATAAT+AGG - chr7_1:67461152-67461171 None:intergenic 15.0%
!! AGAAATATGAATTTAAGAAA+AGG - chr7_1:67461282-67461301 None:intergenic 15.0%
!!! TCTTAAATTCATATTTCTAT+TGG + chr7_1:67461284-67461303 Msa1032510:intron 15.0%
!!! CTTAAATTCATATTTCTATT+GGG + chr7_1:67461285-67461304 Msa1032510:intron 15.0%
!! TGAATTGAATCAATTTAAAC+CGG - chr7_1:67458631-67458650 None:intergenic 20.0%
!!! ATTGATTCAATTCAATATCT+TGG + chr7_1:67458637-67458656 Msa1032510:five_prime_UTR 20.0%
!! TGAATTAGAATTAAATCGAA+TGG - chr7_1:67459180-67459199 None:intergenic 20.0%
!! ACATTTATGATAGAACATTA+TGG + chr7_1:67459670-67459689 Msa1032510:intron 20.0%
!!! AAAAGTATGATCTTTCATAT+TGG + chr7_1:67460103-67460122 Msa1032510:intron 20.0%
!! TAATTATTCTATAGTTCAGT+TGG + chr7_1:67460465-67460484 Msa1032510:intron 20.0%
!! TCAGGAAAAAATAATAAAGA+TGG + chr7_1:67460662-67460681 Msa1032510:intron 20.0%
!! ATATCATGAACAAATATAGT+AGG - chr7_1:67460699-67460718 None:intergenic 20.0%
!! CTAAAATGAAATTTACATAG+TGG - chr7_1:67460755-67460774 None:intergenic 20.0%
!!! ATGTAAATTTCATTTTAGTC+TGG + chr7_1:67460757-67460776 Msa1032510:intron 20.0%
!!! TTTTTTTTTCTAACAAAACG+TGG + chr7_1:67461075-67461094 Msa1032510:intron 20.0%
!!! AAGCAATTTAAAATATCAGT+TGG + chr7_1:67461232-67461251 Msa1032510:intron 20.0%
!! TTTAAAGAAATGAAGAAAAG+TGG + chr7_1:67461308-67461327 Msa1032510:intron 20.0%
!! ACAAAACATTGAAATGAAAA+GGG + chr7_1:67461743-67461762 Msa1032510:CDS 20.0%
!!! ATGATTTTAGAAAATACCTT+AGG - chr7_1:67461782-67461801 None:intergenic 20.0%
!! ACATAGTTTATTATTTCACT+GGG - chr7_1:67461826-67461845 None:intergenic 20.0%
!! AACATAGTTTATTATTTCAC+TGG - chr7_1:67461827-67461846 None:intergenic 20.0%
!! TATGTTATATTGTGTAATAC+TGG + chr7_1:67461841-67461860 Msa1032510:intron 20.0%
!! AAAATGAAAATCCTGTTAAT+TGG - chr7_1:67462117-67462136 None:intergenic 20.0%
!! TCAAGTAAAAACAATCATAT+TGG + chr7_1:67463210-67463229 Msa1032510:CDS 20.0%
!! TTATTTATCTATCTTTGTTG+AGG + chr7_1:67463787-67463806 Msa1032510:three_prime_UTR 20.0%
!! GATAGAAAACATGAAAATAT+TGG - chr7_1:67463885-67463904 None:intergenic 20.0%
!! TAGATTATAATTCCATTTCT+AGG - chr7_1:67463913-67463932 None:intergenic 20.0%
!!! GAATTATAATCTAGTTTCTA+TGG + chr7_1:67463920-67463939 Msa1032510:three_prime_UTR 20.0%
!!! ACTTGTTTTACGCTATAAAT+AGG + chr7_1:67458561-67458580 Msa1032510:five_prime_UTR 25.0%
! ATAAACAGAGGAATGAAATT+TGG - chr7_1:67459141-67459160 None:intergenic 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG - chr7_1:67459365-67459384 None:intergenic 25.0%
! CAAGTTCGTACATTTAAAAA+CGG - chr7_1:67459639-67459658 None:intergenic 25.0%
! TTTATGATAGAACATTATGG+CGG + chr7_1:67459673-67459692 Msa1032510:intron 25.0%
! CATAAATCATTATCCTTAGT+AGG + chr7_1:67459946-67459965 Msa1032510:intron 25.0%
! AAACAAATAGAATTGATCCA+GGG + chr7_1:67460022-67460041 Msa1032510:intron 25.0%
!!! TTTTTTGCAGAATTCCAAAA+TGG - chr7_1:67460200-67460219 None:intergenic 25.0%
!!! TCTCTCTAGTTATTGTTTTA+TGG + chr7_1:67460264-67460283 Msa1032510:intron 25.0%
!! CTGGAGATAAGATTTTATAT+AGG + chr7_1:67460353-67460372 Msa1032510:intron 25.0%
!! TTTTATATAGGAGAGAAAGA+AGG + chr7_1:67460365-67460384 Msa1032510:intron 25.0%
! TTTATATAGGAGAGAAAGAA+GGG + chr7_1:67460366-67460385 Msa1032510:intron 25.0%
! TTAATATTTAGTCCTTCGTT+CGG + chr7_1:67460534-67460553 Msa1032510:intron 25.0%
! GAACTATTTGAATTGTATGA+AGG + chr7_1:67460625-67460644 Msa1032510:intron 25.0%
!! GTTAGATCTTATGCAATTTT+TGG + chr7_1:67460888-67460907 Msa1032510:intron 25.0%
!!! TGAAAAACATTTTTGAGTGA+TGG + chr7_1:67460913-67460932 Msa1032510:intron 25.0%
! TTATAACATATCTAGACTAC+AGG + chr7_1:67460944-67460963 Msa1032510:intron 25.0%
! TTAAAATATCAGTTGGAGAT+TGG + chr7_1:67461239-67461258 Msa1032510:intron 25.0%
! GAAAAGATAAACAGATATTC+AGG - chr7_1:67461348-67461367 None:intergenic 25.0%
! GAAACAATAAGCATATTGTA+TGG + chr7_1:67461389-67461408 Msa1032510:intron 25.0%
!!! ATTTTGACCAGTTTTTTAAG+CGG + chr7_1:67461453-67461472 Msa1032510:intron 25.0%
!! TTTCATTTCAATGTTTTGTC+CGG - chr7_1:67461742-67461761 None:intergenic 25.0%
! GACAAAACATTGAAATGAAA+AGG + chr7_1:67461742-67461761 Msa1032510:CDS 25.0%
! CAAAACATTGAAATGAAAAG+GGG + chr7_1:67461744-67461763 Msa1032510:CDS 25.0%
!! TAACAGGATTTTCATTTTCA+AGG + chr7_1:67462119-67462138 Msa1032510:intron 25.0%
!! AGGTGTGATTTTCATAATTA+TGG + chr7_1:67462139-67462158 Msa1032510:intron 25.0%
!! GGTGTGATTTTCATAATTAT+GGG + chr7_1:67462140-67462159 Msa1032510:intron 25.0%
!! CAATATCTGAAGTATTAGAA+TGG - chr7_1:67462264-67462283 None:intergenic 25.0%
!!! ATTTGTTGTTAGCAAGAAAA+AGG + chr7_1:67462939-67462958 Msa1032510:CDS 25.0%
! CTCAGAAATATCCTTAATTT+GGG - chr7_1:67463457-67463476 None:intergenic 25.0%
!!! AGAGTAGTGTTTATTTTTGA+AGG + chr7_1:67463657-67463676 Msa1032510:three_prime_UTR 25.0%
! TTTACCAGCAATTATACAAA+AGG + chr7_1:67463692-67463711 Msa1032510:three_prime_UTR 25.0%
!! TTTTCCTTTTGTATAATTGC+TGG - chr7_1:67463699-67463718 None:intergenic 25.0%
! CAATATGAAATCAATCAAAG+GGG - chr7_1:67463813-67463832 None:intergenic 25.0%
! CCAATATGAAATCAATCAAA+GGG - chr7_1:67463814-67463833 None:intergenic 25.0%
! TCCAATATGAAATCAATCAA+AGG - chr7_1:67463815-67463834 None:intergenic 25.0%
!! ATTGATTTCATATTGGAGAT+GGG + chr7_1:67463818-67463837 Msa1032510:three_prime_UTR 25.0%
TTTATAGCGTAAAACAAGTG+TGG - chr7_1:67458560-67458579 None:intergenic 30.0%
ATTGAATCAATTTAAACCGG+AGG - chr7_1:67458628-67458647 None:intergenic 30.0%
! AAATCGAACCATATTTTCCT+AGG - chr7_1:67458664-67458683 None:intergenic 30.0%
GAACAAGAATGAATAAACAG+AGG - chr7_1:67459153-67459172 None:intergenic 30.0%
! ATGAAGTCTTTTCTATCCAA+CGG + chr7_1:67459296-67459315 Msa1032510:CDS 30.0%
! TGAAAAAGTATGACTAACAG+TGG - chr7_1:67459327-67459346 None:intergenic 30.0%
CTTTATATTCTGTCCTTGTT+TGG + chr7_1:67459349-67459368 Msa1032510:intron 30.0%
AAACACTTGCGAAACTATTT+GGG - chr7_1:67459532-67459551 None:intergenic 30.0%
TAAACACTTGCGAAACTATT+TGG - chr7_1:67459533-67459552 None:intergenic 30.0%
ACATCATAAGACAAGAAACT+AGG + chr7_1:67459776-67459795 Msa1032510:intron 30.0%
! CAATTTTGCATGGCAATATA+AGG - chr7_1:67459825-67459844 None:intergenic 30.0%
GAAACAAATAGAATTGATCC+AGG + chr7_1:67460021-67460040 Msa1032510:intron 30.0%
ATGTGTATGTATGATAGTTC+TGG + chr7_1:67460334-67460353 Msa1032510:intron 30.0%
TACAATTCAAATAGTTCCGA+GGG - chr7_1:67460622-67460641 None:intergenic 30.0%
ATACAATTCAAATAGTTCCG+AGG - chr7_1:67460623-67460642 None:intergenic 30.0%
!! AAGGTATTTTCGATAGTTTC+AGG + chr7_1:67460644-67460663 Msa1032510:intron 30.0%
! GTTTGAGCTGAAGTATTATA+TGG + chr7_1:67460845-67460864 Msa1032510:intron 30.0%
CAGGTTACATATGTCAATTT+CGG + chr7_1:67460963-67460982 Msa1032510:intron 30.0%
! TCTTTTCATCTTAAATCTCC+TGG + chr7_1:67460991-67461010 Msa1032510:intron 30.0%
CAACATTCAAATTTAGTCAC+TGG + chr7_1:67461114-67461133 Msa1032510:intron 30.0%
! AAGAAGCATATTGGTGTATA+TGG + chr7_1:67461195-67461214 Msa1032510:intron 30.0%
AAACAGATATTCAGGATTTC+AGG - chr7_1:67461340-67461359 None:intergenic 30.0%
! TTCTCAAATAGTTTAGAACG+AGG - chr7_1:67461372-67461391 None:intergenic 30.0%
!! AGGGTTTGTTAAAACATGAA+AGG - chr7_1:67461424-67461443 None:intergenic 30.0%
! TGGTCAAAATTTGAAACTGA+GGG - chr7_1:67461443-67461462 None:intergenic 30.0%
TCATAAACCGCTTAAAAAAC+TGG - chr7_1:67461463-67461482 None:intergenic 30.0%
! ATGATTTGTGCTTGATATGT+AGG + chr7_1:67461479-67461498 Msa1032510:intron 30.0%
! TTCATTTCAATGTTTTGTCC+GGG - chr7_1:67461741-67461760 None:intergenic 30.0%
! GTGATTTTCATAATTATGGG+AGG + chr7_1:67462143-67462162 Msa1032510:CDS 30.0%
ATACTTCAGATATTGATGCT+AGG + chr7_1:67462269-67462288 Msa1032510:CDS 30.0%
! GATACATGATGAAGATTTTC+CGG + chr7_1:67462372-67462391 Msa1032510:CDS 30.0%
CTATTAACTCCTTTCCTTAA+CGG - chr7_1:67462406-67462425 None:intergenic 30.0%
!! ATAGATTTGTTGTAAGCATG+AGG + chr7_1:67462422-67462441 Msa1032510:CDS 30.0%
!! AGTTTTATAGTCCTCAACTT+CGG - chr7_1:67462515-67462534 None:intergenic 30.0%
AAGTTGAGGACTATAAAACT+GGG + chr7_1:67462515-67462534 Msa1032510:CDS 30.0%
TTCAAGTGAAAATGTCATCA+AGG + chr7_1:67462777-67462796 Msa1032510:CDS 30.0%
AAGCTGAAAAATCTGATAGA+TGG + chr7_1:67462815-67462834 Msa1032510:CDS 30.0%
TAGATGGTTTAGAAAGATTG+CGG + chr7_1:67462831-67462850 Msa1032510:CDS 30.0%
!! GATATTGCACTTGTTATATC+TGG - chr7_1:67462871-67462890 None:intergenic 30.0%
TTGTTAGCAAGAAAAAGGAT+CGG + chr7_1:67462944-67462963 Msa1032510:CDS 30.0%
!! TCATATTGGTTCTACTTATG+CGG + chr7_1:67463224-67463243 Msa1032510:CDS 30.0%
GCTCAGAAATATCCTTAATT+TGG - chr7_1:67463458-67463477 None:intergenic 30.0%
ACAAAAGGAAAATGAAGATG+TGG + chr7_1:67463707-67463726 Msa1032510:three_prime_UTR 30.0%
! CCCTTTGATTGATTTCATAT+TGG + chr7_1:67463811-67463830 Msa1032510:three_prime_UTR 30.0%
! GATTGATTTCATATTGGAGA+TGG + chr7_1:67463817-67463836 Msa1032510:three_prime_UTR 30.0%
TTGATTTCATATTGGAGATG+GGG + chr7_1:67463819-67463838 Msa1032510:three_prime_UTR 30.0%
TTCTATCTTGATCCTAGAAA+TGG + chr7_1:67463898-67463917 Msa1032510:three_prime_UTR 30.0%
GTAAAACAAGTGTGGTCATT+TGG - chr7_1:67458552-67458571 None:intergenic 35.0%
CAATTCAATATCTTGGTCCT+AGG + chr7_1:67458644-67458663 Msa1032510:five_prime_UTR 35.0%
ATCTTGGTCCTAGGAAAATA+TGG + chr7_1:67458653-67458672 Msa1032510:five_prime_UTR 35.0%
TGAATGAAGAAAAGAGAGTG+CGG - chr7_1:67458827-67458846 None:intergenic 35.0%
AGAGAAGAAGAAGAAGAAGT+AGG - chr7_1:67458858-67458877 None:intergenic 35.0%
AAACAGAAACAAACCTGAGA+AGG - chr7_1:67459118-67459137 None:intergenic 35.0%
GGATAGAAAAGACTTCATCT+TGG - chr7_1:67459294-67459313 None:intergenic 35.0%
!! AGCTATTTTCGTAGCTATCT+TGG + chr7_1:67459457-67459476 Msa1032510:intron 35.0%
CACTAATGCAGTGTTACAAA+GGG - chr7_1:67459594-67459613 None:intergenic 35.0%
! AACACTGCATTAGTGCTTTT+TGG + chr7_1:67459599-67459618 Msa1032510:intron 35.0%
!! ACACTGCATTAGTGCTTTTT+GGG + chr7_1:67459600-67459619 Msa1032510:intron 35.0%
TCATAAGACAAGAAACTAGG+TGG + chr7_1:67459779-67459798 Msa1032510:intron 35.0%
!! CATGAAAGCACAATTTTGCA+TGG - chr7_1:67459835-67459854 None:intergenic 35.0%
TGCAAAATTGTGCTTTCATG+CGG + chr7_1:67459835-67459854 Msa1032510:intron 35.0%
GAACACACTCATAATGTCTA+AGG - chr7_1:67459885-67459904 None:intergenic 35.0%
GTGTTCAACGTTTCTTAGAT+TGG + chr7_1:67459899-67459918 Msa1032510:intron 35.0%
TTCAACGTTTCTTAGATTGG+AGG + chr7_1:67459902-67459921 Msa1032510:intron 35.0%
ATTATCCTTAGTAGGCTACT+GGG + chr7_1:67459954-67459973 Msa1032510:intron 35.0%
! ACTTTTGAGCAGGAAGTTTA+AGG - chr7_1:67460089-67460108 None:intergenic 35.0%
! GAAAGATCATACTTTTGAGC+AGG - chr7_1:67460099-67460118 None:intergenic 35.0%
TGGCAACTTGTGCAAATAAA+TGG - chr7_1:67460180-67460199 None:intergenic 35.0%
!! ATTTGCACAAGTTGCCATTT+TGG + chr7_1:67460183-67460202 Msa1032510:intron 35.0%
!! GAAAGAAGGGAAATTTGTTG+AGG + chr7_1:67460379-67460398 Msa1032510:intron 35.0%
ACAATTCAAATAGTTCCGAG+GGG - chr7_1:67460621-67460640 None:intergenic 35.0%
! TATGCTCTTTTACGTTCAGT+AGG + chr7_1:67461051-67461070 Msa1032510:intron 35.0%
ATATGCTTCTTATGCAGCTA+AGG - chr7_1:67461186-67461205 None:intergenic 35.0%
! TAGCTGCATAAGAAGCATAT+TGG + chr7_1:67461186-67461205 Msa1032510:intron 35.0%
GATTGGAAATTCTGATCATG+TGG + chr7_1:67461256-67461275 Msa1032510:intron 35.0%
! CTGGTCAAAATTTGAAACTG+AGG - chr7_1:67461444-67461463 None:intergenic 35.0%
ATTTGCTTTATCAGAGTCCA+AGG - chr7_1:67461505-67461524 None:intergenic 35.0%
GGACTCTGATAAAGCAAATA+TGG + chr7_1:67461506-67461525 Msa1032510:CDS 35.0%
TTCACCAAATAGGTTTCTGA+CGG - chr7_1:67461625-67461644 None:intergenic 35.0%
GCTTGAAAAGTTCACCAAAT+AGG - chr7_1:67461635-67461654 None:intergenic 35.0%
TGCACTGAATCAAAAGAGTT+GGG - chr7_1:67461678-67461697 None:intergenic 35.0%
TTGCACTGAATCAAAAGAGT+TGG - chr7_1:67461679-67461698 None:intergenic 35.0%
TCAGTGCAAAATCAAATACC+TGG + chr7_1:67461690-67461709 Msa1032510:CDS 35.0%
TTGAAATGAAAAGGGGTGAT+TGG + chr7_1:67461751-67461770 Msa1032510:CDS 35.0%
TGTGTAATACTGGAAAACCA+AGG + chr7_1:67461851-67461870 Msa1032510:intron 35.0%
! GCATTCCCTTTTTCTAATAC+TGG + chr7_1:67461935-67461954 Msa1032510:intron 35.0%
ACCTGCCAGTATTAGAAAAA+GGG - chr7_1:67461943-67461962 None:intergenic 35.0%
AGGGAGAAAAATACTTACTG+AGG - chr7_1:67462058-67462077 None:intergenic 35.0%
TGTATGCATCAAAACTTCGA+GGG - chr7_1:67462093-67462112 None:intergenic 35.0%
ATGTATGCATCAAAACTTCG+AGG - chr7_1:67462094-67462113 None:intergenic 35.0%
GATGCATACATCCAATTAAC+AGG + chr7_1:67462103-67462122 Msa1032510:intron 35.0%
TTCAGATATTGATGCTAGGT+TGG + chr7_1:67462273-67462292 Msa1032510:CDS 35.0%
TTCCTTAACGGCATTATTTC+CGG - chr7_1:67462394-67462413 None:intergenic 35.0%
GAAATAATGCCGTTAAGGAA+AGG + chr7_1:67462394-67462413 Msa1032510:CDS 35.0%
! GTTTTATAGTCCTCAACTTC+GGG - chr7_1:67462514-67462533 None:intergenic 35.0%
GAAGTTGAGGACTATAAAAC+TGG + chr7_1:67462514-67462533 Msa1032510:CDS 35.0%
AGTTGAGGACTATAAAACTG+GGG + chr7_1:67462516-67462535 Msa1032510:CDS 35.0%
!! ATGTTTTTGTAGTCAGATCG+AGG - chr7_1:67462598-67462617 None:intergenic 35.0%
TCGATCTGACTACAAAAACA+TGG + chr7_1:67462597-67462616 Msa1032510:CDS 35.0%
CGATCTGACTACAAAAACAT+GGG + chr7_1:67462598-67462617 Msa1032510:CDS 35.0%
GATGTATTGCTAGCAATTGA+CGG - chr7_1:67462655-67462674 None:intergenic 35.0%
TCACATTTCCAAGATGTGAA+AGG + chr7_1:67462673-67462692 Msa1032510:CDS 35.0%
CACATTTCCAAGATGTGAAA+GGG + chr7_1:67462674-67462693 Msa1032510:CDS 35.0%
! AACTGGCATATGATGGAAAA+GGG - chr7_1:67462720-67462739 None:intergenic 35.0%
CATTTCAGGGAAATCATCAT+CGG - chr7_1:67462893-67462912 None:intergenic 35.0%
!! TTTTTGGCAAAGTAATCTGG+GGG - chr7_1:67463051-67463070 None:intergenic 35.0%
!! CTTTTTGGCAAAGTAATCTG+GGG - chr7_1:67463052-67463071 None:intergenic 35.0%
!! CCTTTTTGGCAAAGTAATCT+GGG - chr7_1:67463053-67463072 None:intergenic 35.0%
!! TCCTTTTTGGCAAAGTAATC+TGG - chr7_1:67463054-67463073 None:intergenic 35.0%
ATGGAACAAATTCAACAGAC+AGG + chr7_1:67463088-67463107 Msa1032510:CDS 35.0%
AATCATCCTCAGTATCTGAA+GGG + chr7_1:67463121-67463140 Msa1032510:CDS 35.0%
TTACTTGAGATCTGATCAGA+AGG - chr7_1:67463198-67463217 None:intergenic 35.0%
ATTGAAGGAAAATCTTCGTC+TGG - chr7_1:67463492-67463511 None:intergenic 35.0%
TTACGCATAGGCATTATTGA+AGG - chr7_1:67463507-67463526 None:intergenic 35.0%
TCAATAATGCCTATGCGTAA+AGG + chr7_1:67463507-67463526 Msa1032510:CDS 35.0%
CAATAATGCCTATGCGTAAA+GGG + chr7_1:67463508-67463527 Msa1032510:CDS 35.0%
AATAATGCCTATGCGTAAAG+GGG + chr7_1:67463509-67463528 Msa1032510:CDS 35.0%
TCACAACTGGAAGATTTCTT+CGG - chr7_1:67463599-67463618 None:intergenic 35.0%
GAATCAATTTAAACCGGAGG+AGG - chr7_1:67458625-67458644 None:intergenic 40.0%
TGGAAATGAGAGGAGAAAGA+GGG - chr7_1:67458801-67458820 None:intergenic 40.0%
!!! GAGGCTTTGAGTTTGAGTTT+TGG - chr7_1:67458885-67458904 None:intergenic 40.0%
! TGTGAATGTGTTGTTGTTGG+TGG - chr7_1:67458917-67458936 None:intergenic 40.0%
GAGAGAAATCTGGAAAACTC+TGG - chr7_1:67458984-67459003 None:intergenic 40.0%
GAAACAAACCTGAGAAGGTT+AGG - chr7_1:67459113-67459132 None:intergenic 40.0%
AGTACCATGTTCAACCACAA+CGG - chr7_1:67459237-67459256 None:intergenic 40.0%
GCACTAATGCAGTGTTACAA+AGG - chr7_1:67459595-67459614 None:intergenic 40.0%
! ACTAAGTGGGCTCAATTACA+TGG - chr7_1:67459707-67459726 None:intergenic 40.0%
CAAGTCATATCGCACTAAGT+GGG - chr7_1:67459720-67459739 None:intergenic 40.0%
! ATGTCTAAGGTGCAAAACAC+CGG - chr7_1:67459872-67459891 None:intergenic 40.0%
CATTATCCTTAGTAGGCTAC+TGG + chr7_1:67459953-67459972 Msa1032510:intron 40.0%
CAAATAGAATTGATCCAGGG+TGG + chr7_1:67460025-67460044 Msa1032510:intron 40.0%
CATGCAGAGAGACAAATTTC+TGG - chr7_1:67460317-67460336 None:intergenic 40.0%
TGGTTTGAGCTAAAGGGAAA+AGG - chr7_1:67460582-67460601 None:intergenic 40.0%
!! CTCAACTGGTTTGAGCTAAA+GGG - chr7_1:67460588-67460607 None:intergenic 40.0%
!! ACTCAACTGGTTTGAGCTAA+AGG - chr7_1:67460589-67460608 None:intergenic 40.0%
CAATTCAAATAGTTCCGAGG+GGG - chr7_1:67460620-67460639 None:intergenic 40.0%
TCAGCTCAAACATAAGACAG+AGG - chr7_1:67460836-67460855 None:intergenic 40.0%
TAAATCTCCTGGATCAGACT+TGG + chr7_1:67461002-67461021 Msa1032510:intron 40.0%
AAGCTGAGTTATAGTACACC+TGG + chr7_1:67461651-67461670 Msa1032510:CDS 40.0%
GTGCAAAATCAAATACCTGG+TGG + chr7_1:67461693-67461712 Msa1032510:CDS 40.0%
! ATTTCAATGTTTTGTCCGGG+AGG - chr7_1:67461738-67461757 None:intergenic 40.0%
! TCCCTTTTTCTAATACTGGC+AGG + chr7_1:67461939-67461958 Msa1032510:intron 40.0%
CACCTGCCAGTATTAGAAAA+AGG - chr7_1:67461944-67461963 None:intergenic 40.0%
GTCTTGAATGTGAAGAAGCA+AGG + chr7_1:67461996-67462015 Msa1032510:CDS 40.0%
TCGAGGGAAAAAGATTCAGA+GGG - chr7_1:67462077-67462096 None:intergenic 40.0%
TTCGAGGGAAAAAGATTCAG+AGG - chr7_1:67462078-67462097 None:intergenic 40.0%
GAACCCAAAGATATTTGTCC+AGG - chr7_1:67462202-67462221 None:intergenic 40.0%
TGGTTTACATTTCCATACCC+TGG - chr7_1:67462244-67462263 None:intergenic 40.0%
! AGATATTGATGCTAGGTTGG+TGG + chr7_1:67462276-67462295 Msa1032510:CDS 40.0%
TTCCGGAAATAATGCCGTTA+AGG + chr7_1:67462389-67462408 Msa1032510:CDS 40.0%
GCTTCTCTTGTATTGAGCAT+TGG - chr7_1:67462473-67462492 None:intergenic 40.0%
TGCTCAATACAAGAGAAGCT+TGG + chr7_1:67462474-67462493 Msa1032510:CDS 40.0%
GCTCAATACAAGAGAAGCTT+GGG + chr7_1:67462475-67462494 Msa1032510:CDS 40.0%
! TTTTGTAGTCAGATCGAGGA+GGG - chr7_1:67462594-67462613 None:intergenic 40.0%
! TTTTTGTAGTCAGATCGAGG+AGG - chr7_1:67462595-67462614 None:intergenic 40.0%
! GGTGCTGAACAAAATTTCAG+TGG + chr7_1:67462619-67462638 Msa1032510:CDS 40.0%
TGTTGTTCCCTTTCACATCT+TGG - chr7_1:67462684-67462703 None:intergenic 40.0%
! ACTGGCATATGATGGAAAAG+GGG - chr7_1:67462719-67462738 None:intergenic 40.0%
! GAACTGGCATATGATGGAAA+AGG - chr7_1:67462721-67462740 None:intergenic 40.0%
TTTCCATCATATGCCAGTTC+TGG + chr7_1:67462721-67462740 Msa1032510:CDS 40.0%
! TACGCATTGGCATCATTTCA+GGG - chr7_1:67462906-67462925 None:intergenic 40.0%
! TTACGCATTGGCATCATTTC+AGG - chr7_1:67462907-67462926 None:intergenic 40.0%
GAAATGATGCCAATGCGTAA+AGG + chr7_1:67462907-67462926 Msa1032510:CDS 40.0%
! CGATTTTCTCCTTTACGCAT+TGG - chr7_1:67462919-67462938 None:intergenic 40.0%
!! CTTATATGCTGGTGTTGTCA+AGG - chr7_1:67462971-67462990 None:intergenic 40.0%
ACCAGCATATAAGAGACGTT+TGG + chr7_1:67462978-67462997 Msa1032510:CDS 40.0%
ATATAAGAGACGTTTGGCCA+TGG + chr7_1:67462984-67463003 Msa1032510:CDS 40.0%
AGTATTACCAGATTGCTCCA+TGG - chr7_1:67463004-67463023 None:intergenic 40.0%
CCCAGATTACTTTGCCAAAA+AGG + chr7_1:67463050-67463069 Msa1032510:CDS 40.0%
TGCCAAAAAGGAAAAACCAC+AGG + chr7_1:67463062-67463081 Msa1032510:CDS 40.0%
! TGCCTGTGGTTTTTCCTTTT+TGG - chr7_1:67463067-67463086 None:intergenic 40.0%
TACTGAGGATGATTCAACAC+TGG - chr7_1:67463115-67463134 None:intergenic 40.0%
GAATCATCCTCAGTATCTGA+AGG + chr7_1:67463120-67463139 Msa1032510:CDS 40.0%
AAGCAGTGGAAATTCAAGTC+AGG + chr7_1:67463251-67463270 Msa1032510:CDS 40.0%
ATGGTCAGGGAAAAGTTTAG+AGG + chr7_1:67463356-67463375 Msa1032510:CDS 40.0%
TGGTCAGGGAAAAGTTTAGA+GGG + chr7_1:67463357-67463376 Msa1032510:CDS 40.0%
GAAAAGTTTAGAGGGATCAG+CGG + chr7_1:67463365-67463384 Msa1032510:CDS 40.0%
! CCTTCATTTTCTCTCTTGAC+AGG - chr7_1:67463630-67463649 None:intergenic 40.0%
CCTGTCAAGAGAGAAAATGA+AGG + chr7_1:67463627-67463646 Msa1032510:CDS 40.0%
GTGTGGTCATTTGGAAGTCA+AGG - chr7_1:67458543-67458562 None:intergenic 45.0%
TTCTTCACTTCATCCTCCTC+CGG + chr7_1:67458609-67458628 Msa1032510:five_prime_UTR 45.0%
GAGGAAGAAGATGAACCTTG+GGG - chr7_1:67458754-67458773 None:intergenic 45.0%
GGAGGAAGAAGATGAACCTT+GGG - chr7_1:67458755-67458774 None:intergenic 45.0%
GTGGAAATGAGAGGAGAAAG+AGG - chr7_1:67458802-67458821 None:intergenic 45.0%
! ATGAAGAAAAGAGAGTGCGG+TGG - chr7_1:67458824-67458843 None:intergenic 45.0%
! GAATGTGTTGTTGTTGGTGG+TGG - chr7_1:67458914-67458933 None:intergenic 45.0%
! GGGTGTGAATGTGTTGTTGT+TGG - chr7_1:67458920-67458939 None:intergenic 45.0%
AATCTGGAAAACTCTGGCCA+TGG - chr7_1:67458978-67458997 None:intergenic 45.0%
GGAGATGTGTGAGAGAAATC+TGG - chr7_1:67458994-67459013 None:intergenic 45.0%
GAGATAGACCTAACCTTCTC+AGG + chr7_1:67459102-67459121 Msa1032510:CDS 45.0%
TGCGAGTCGGAGAACATAAA+CGG - chr7_1:67459260-67459279 None:intergenic 45.0%
CCAAGTCATATCGCACTAAG+TGG - chr7_1:67459721-67459740 None:intergenic 45.0%
CCACTTAGTGCGATATGACT+TGG + chr7_1:67459718-67459737 Msa1032510:intron 45.0%
AAGGTGCAAAACACCGGAAA+TGG - chr7_1:67459866-67459885 None:intergenic 45.0%
GAAAAGGAGTTGGAGGTCTT+GGG - chr7_1:67460566-67460585 None:intergenic 45.0%
CTAAAGGGAAAAGGAGTTGG+AGG - chr7_1:67460573-67460592 None:intergenic 45.0%
GAGCTAAAGGGAAAAGGAGT+TGG - chr7_1:67460576-67460595 None:intergenic 45.0%
AAATAGTTCCGAGGGGGATT+GGG - chr7_1:67460614-67460633 None:intergenic 45.0%
TGTGCTTGATATGTAGGCCT+TGG + chr7_1:67461485-67461504 Msa1032510:intron 45.0%
GAGTTATGCAAGTAGCTGCT+TGG + chr7_1:67461551-67461570 Msa1032510:CDS 45.0%
TCCTCCGTCAGAAACCTATT+TGG + chr7_1:67461618-67461637 Msa1032510:CDS 45.0%
ACCAAATAGGTTTCTGACGG+AGG - chr7_1:67461622-67461641 None:intergenic 45.0%
GAATCAAAAGAGTTGGGTCC+AGG - chr7_1:67461672-67461691 None:intergenic 45.0%
! CATTTTCTCTACGCTCACCT+TGG - chr7_1:67461871-67461890 None:intergenic 45.0%
GTGAAGAAGCAAGGCCAAAA+AGG + chr7_1:67462005-67462024 Msa1032510:CDS 45.0%
!! GGAGGAATGTAGCTTGCTTA+CGG + chr7_1:67462161-67462180 Msa1032510:CDS 45.0%
CGGCCTGGACAAATATCTTT+GGG + chr7_1:67462196-67462215 Msa1032510:CDS 45.0%
! TGGATGTGATGTGGTATTGG+TGG - chr7_1:67462224-67462243 None:intergenic 45.0%
ACCAATACCACATCACATCC+AGG + chr7_1:67462223-67462242 Msa1032510:CDS 45.0%
CCAATACCACATCACATCCA+GGG + chr7_1:67462224-67462243 Msa1032510:CDS 45.0%
!! GTTGGTGGCTAATGAAGAGA+AGG + chr7_1:67462291-67462310 Msa1032510:CDS 45.0%
AAGCATGAGGAAAACTCCAC+TGG + chr7_1:67462435-67462454 Msa1032510:CDS 45.0%
GATACTCTGGACGACATTCT+AGG + chr7_1:67462556-67462575 Msa1032510:CDS 45.0%
GACATTCTAGGTCGTTCAAC+TGG + chr7_1:67462568-67462587 Msa1032510:CDS 45.0%
TCACCAGAACTGGCATATGA+TGG - chr7_1:67462727-67462746 None:intergenic 45.0%
GCCAAACGTCTCTTATATGC+TGG - chr7_1:67462982-67463001 None:intergenic 45.0%
GCAAAGTAATCTGGGGGAAA+GGG - chr7_1:67463045-67463064 None:intergenic 45.0%
AAGGAAAAACCACAGGCAGA+TGG + chr7_1:67463069-67463088 Msa1032510:CDS 45.0%
! GAATTTGTTCCATCTGCCTG+TGG - chr7_1:67463081-67463100 None:intergenic 45.0%
CTTGAGATCTGATCAGAAGG+AGG - chr7_1:67463195-67463214 None:intergenic 45.0%
GATGAACTCTCGGTCAGATT+TGG - chr7_1:67463297-67463316 None:intergenic 45.0%
TGAACCTGTGGATGAACTCT+CGG - chr7_1:67463307-67463326 None:intergenic 45.0%
!! ACCAGAGTGTTGGAACAGAA+TGG + chr7_1:67463337-67463356 Msa1032510:CDS 45.0%
ACCATTCTGTTCCAACACTC+TGG - chr7_1:67463341-67463360 None:intergenic 45.0%
! AGTGTTGGAACAGAATGGTC+AGG + chr7_1:67463342-67463361 Msa1032510:CDS 45.0%
GTGTTGGAACAGAATGGTCA+GGG + chr7_1:67463343-67463362 Msa1032510:CDS 45.0%
TCGGACATATCCAAAGGATC+CGG - chr7_1:67463399-67463418 None:intergenic 45.0%
! CCTTAATTTGGGCAACACGA+CGG - chr7_1:67463446-67463465 None:intergenic 45.0%
ACAGATTCGTTGTGAGCAAG+CGG + chr7_1:67463535-67463554 Msa1032510:CDS 45.0%
GATGTCAATCTCCTTTCCAG+TGG - chr7_1:67463567-67463586 None:intergenic 45.0%
!!! TATATTTTATAATAGAAATA+GGG - chr7_1:67459404-67459423 None:intergenic 5.0%
!!! TTATATTTTATAATAGAAAT+AGG - chr7_1:67459405-67459424 None:intergenic 5.0%
TGATCTATCTCAGCCTCCTC+CGG + chr7_1:67458707-67458726 Msa1032510:five_prime_UTR 50.0%
GAAGAAGATGAACCTTGGGG+AGG - chr7_1:67458751-67458770 None:intergenic 50.0%
CGGAGGAAGAAGATGAACCT+TGG - chr7_1:67458756-67458775 None:intergenic 50.0%
AGAGGAGACGGATATTGTGG+CGG - chr7_1:67458776-67458795 None:intergenic 50.0%
GAGAGAGGAGACGGATATTG+TGG - chr7_1:67458779-67458798 None:intergenic 50.0%
AGAAAGAGGGAGAGAGGAGA+CGG - chr7_1:67458788-67458807 None:intergenic 50.0%
! AAGAAAAGAGAGTGCGGTGG+TGG - chr7_1:67458821-67458840 None:intergenic 50.0%
!! TTGTTGGTGGTGGTGTTGTG+AGG - chr7_1:67458904-67458923 None:intergenic 50.0%
GAGGGGAGATTGTGAAGGTT+GGG - chr7_1:67458940-67458959 None:intergenic 50.0%
TGAGGGGAGATTGTGAAGGT+TGG - chr7_1:67458941-67458960 None:intergenic 50.0%
AAACTCTGGCCATGGATGGT+GGG - chr7_1:67458970-67458989 None:intergenic 50.0%
AAAACTCTGGCCATGGATGG+TGG - chr7_1:67458971-67458990 None:intergenic 50.0%
TGGAAAACTCTGGCCATGGA+TGG - chr7_1:67458974-67458993 None:intergenic 50.0%
GTTGCCGTTGTGGTTGAACA+TGG + chr7_1:67459230-67459249 Msa1032510:CDS 50.0%
! GTTTATGTTCTCCGACTCGC+AGG + chr7_1:67459259-67459278 Msa1032510:CDS 50.0%
GGAAACAGAATCCTGCGAGT+CGG - chr7_1:67459273-67459292 None:intergenic 50.0%
ACTAACAGTGGAGTCACCGT+TGG - chr7_1:67459315-67459334 None:intergenic 50.0%
TCATGCGGTCTCTCCATTTC+CGG + chr7_1:67459850-67459869 Msa1032510:intron 50.0%
ACTCACCCAGTAGCCTACTA+AGG - chr7_1:67459962-67459981 None:intergenic 50.0%
TAGTAGGCTACTGGGTGAGT+AGG + chr7_1:67459962-67459981 Msa1032510:intron 50.0%
AGTAGGCTACTGGGTGAGTA+GGG + chr7_1:67459963-67459982 Msa1032510:intron 50.0%
!! GAAAACTAAGAGCACCACCC+TGG - chr7_1:67460042-67460061 None:intergenic 50.0%
GAGAACAAAAGTCGCTCTGG+CGG - chr7_1:67460238-67460257 None:intergenic 50.0%
GCAGAGAACAAAAGTCGCTC+TGG - chr7_1:67460241-67460260 None:intergenic 50.0%
CTTGGGTTCAAACCGAACGA+AGG - chr7_1:67460549-67460568 None:intergenic 50.0%
GGAAAAGGAGTTGGAGGTCT+TGG - chr7_1:67460567-67460586 None:intergenic 50.0%
TTGAGTTACCCAATCCCCCT+CGG + chr7_1:67460603-67460622 Msa1032510:intron 50.0%
CAAATAGTTCCGAGGGGGAT+TGG - chr7_1:67460615-67460634 None:intergenic 50.0%
GCTAAAGCCAAGTCTGATCC+AGG - chr7_1:67461012-67461031 None:intergenic 50.0%
GCTGCTTGGTCTCTTCAGAA+AGG + chr7_1:67461565-67461584 Msa1032510:CDS 50.0%
GTACGCTCAAATCTACCACC+AGG - chr7_1:67461711-67461730 None:intergenic 50.0%
TTTGAGCGTACAATGCCTCC+CGG + chr7_1:67461720-67461739 Msa1032510:CDS 50.0%
GGGGTGATTGGATTTGCCTA+AGG + chr7_1:67461763-67461782 Msa1032510:CDS 50.0%
AGGCCAAAAAGGCAACTGAC+TGG + chr7_1:67462016-67462035 Msa1032510:CDS 50.0%
! CCTCCAGTCAGTTGCCTTTT+TGG - chr7_1:67462022-67462041 None:intergenic 50.0%
CCAAAAAGGCAACTGACTGG+AGG + chr7_1:67462019-67462038 Msa1032510:CDS 50.0%
GCAACTGACTGGAGGAGAAT+GGG + chr7_1:67462027-67462046 Msa1032510:CDS 50.0%
GCTTACGGTGTGATTGCAAG+CGG + chr7_1:67462176-67462195 Msa1032510:CDS 50.0%
GCGGCCTGGACAAATATCTT+TGG + chr7_1:67462195-67462214 Msa1032510:CDS 50.0%
CCCTGGATGTGATGTGGTAT+TGG - chr7_1:67462227-67462246 None:intergenic 50.0%
ACCACATCACATCCAGGGTA+TGG + chr7_1:67462229-67462248 Msa1032510:CDS 50.0%
TCCATACCCTGGATGTGATG+TGG - chr7_1:67462233-67462252 None:intergenic 50.0%
! ATGAAGAGAAGGCACGACGT+TGG + chr7_1:67462302-67462321 Msa1032510:CDS 50.0%
!! GGCACGACGTTGGTTTAACA+AGG + chr7_1:67462312-67462331 Msa1032510:CDS 50.0%
TGAGGAAAACTCCACTGGAG+AGG + chr7_1:67462440-67462459 Msa1032510:CDS 50.0%
AGCCAAGTCTCGTGATACTC+TGG + chr7_1:67462543-67462562 Msa1032510:CDS 50.0%
! GTCCAGAGTATCACGAGACT+TGG - chr7_1:67462548-67462567 None:intergenic 50.0%
ACTGTCAGTGTCACCAGAAC+TGG - chr7_1:67462737-67462756 None:intergenic 50.0%
! TCTGGGGGAAAGGGTACAAA+GGG - chr7_1:67463036-67463055 None:intergenic 50.0%
! ATCTGGGGGAAAGGGTACAA+AGG - chr7_1:67463037-67463056 None:intergenic 50.0%
GGCAAAGTAATCTGGGGGAA+AGG - chr7_1:67463046-67463065 None:intergenic 50.0%
CTCAGTCCCTTCAGATACTG+AGG - chr7_1:67463130-67463149 None:intergenic 50.0%
TCTGAAGGGACTGAGATGTC+AGG + chr7_1:67463135-67463154 Msa1032510:CDS 50.0%
ATCTGATCAGAAGGAGGTCC+TGG - chr7_1:67463189-67463208 None:intergenic 50.0%
ACTTATGCGGCTTCAAGCAG+TGG + chr7_1:67463237-67463256 Msa1032510:CDS 50.0%
GTTCTCAGATGCTGAACCTG+TGG - chr7_1:67463319-67463338 None:intergenic 50.0%
GCATCTGAGAACCAGAGTGT+TGG + chr7_1:67463327-67463346 Msa1032510:CDS 50.0%
TTTAGAGGGATCAGCGGTCA+GGG + chr7_1:67463371-67463390 Msa1032510:CDS 50.0%
GGATCCTTTGGATATGTCCG+AGG + chr7_1:67463398-67463417 Msa1032510:CDS 50.0%
TCCTTTGGATATGTCCGAGG+AGG + chr7_1:67463401-67463420 Msa1032510:CDS 50.0%
CCGTCGTGTTGCCCAAATTA+AGG + chr7_1:67463443-67463462 Msa1032510:CDS 50.0%
CTGTTCACCCCTTTACGCAT+AGG - chr7_1:67463519-67463538 None:intergenic 50.0%
AGCGGAAAACACCACTGGAA+AGG + chr7_1:67463553-67463572 Msa1032510:CDS 50.0%
ACAGGATCTGAGCTCACAAC+TGG - chr7_1:67463612-67463631 None:intergenic 50.0%
TCAGCCTCCTCCGGCAAAAA+TGG + chr7_1:67458716-67458735 Msa1032510:exon 55.0%
CAGCCTCCTCCGGCAAAAAT+GGG + chr7_1:67458717-67458736 Msa1032510:exon 55.0%
GAAGATGAACCTTGGGGAGG+CGG - chr7_1:67458748-67458767 None:intergenic 55.0%
GAGAGGAGAAAGAGGGAGAG+AGG - chr7_1:67458794-67458813 None:intergenic 55.0%
!! AGTGCGGTGGTGGAAATGAG+AGG - chr7_1:67458811-67458830 None:intergenic 55.0%
CCACTGAGGGGAGATTGTGA+AGG - chr7_1:67458945-67458964 None:intergenic 55.0%
CCTTCACAATCTCCCCTCAG+TGG + chr7_1:67458942-67458961 Msa1032510:CDS 55.0%
!! TGGATGGTGGGTTCCACTGA+GGG - chr7_1:67458958-67458977 None:intergenic 55.0%
!! ATGGATGGTGGGTTCCACTG+AGG - chr7_1:67458959-67458978 None:intergenic 55.0%
TCAGTGGAACCCACCATCCA+TGG + chr7_1:67458958-67458977 Msa1032510:CDS 55.0%
!! CAAGCACTGACTTCAGCCTG+CGG - chr7_1:67459068-67459087 None:intergenic 55.0%
GATCAGAGACGTTGCCGTTG+TGG + chr7_1:67459220-67459239 Msa1032510:CDS 55.0%
GTAGGCTACTGGGTGAGTAG+GGG + chr7_1:67459964-67459983 Msa1032510:intron 55.0%
TAGGCTACTGGGTGAGTAGG+GGG + chr7_1:67459965-67459984 Msa1032510:intron 55.0%
GGGGGATTGGGTAACTCAAC+TGG - chr7_1:67460602-67460621 None:intergenic 55.0%
GGCAACTGACTGGAGGAGAA+TGG + chr7_1:67462026-67462045 Msa1032510:CDS 55.0%
GGAAAACTCCACTGGAGAGG+AGG + chr7_1:67462443-67462462 Msa1032510:CDS 55.0%
TTGGTCAACCTCCTCTCCAG+TGG - chr7_1:67462454-67462473 None:intergenic 55.0%
TAACGACGCTCCCGAAGTTG+AGG + chr7_1:67462501-67462520 Msa1032510:CDS 55.0%
CGTTTGGCCATGGAGCAATC+TGG + chr7_1:67462994-67463013 Msa1032510:CDS 55.0%
! CTGGGGGAAAGGGTACAAAG+GGG - chr7_1:67463035-67463054 None:intergenic 55.0%
GCTAGACCTGAACAGAGTCC+AGG + chr7_1:67463168-67463187 Msa1032510:CDS 55.0%
CTGACCGAGAGTTCATCCAC+AGG + chr7_1:67463300-67463319 Msa1032510:CDS 55.0%
GTTTAGAGGGATCAGCGGTC+AGG + chr7_1:67463370-67463389 Msa1032510:CDS 55.0%
GCCTCCTCGGACATATCCAA+AGG - chr7_1:67463405-67463424 None:intergenic 55.0%
GGATATGTCCGAGGAGGCAA+AGG + chr7_1:67463407-67463426 Msa1032510:CDS 55.0%
GAGCAAGCGGAAAACACCAC+TGG + chr7_1:67463548-67463567 Msa1032510:CDS 55.0%
CCTCCTCCGGCAAAAATGGG+CGG + chr7_1:67458720-67458739 Msa1032510:exon 60.0%
GGAGACGGATATTGTGGCGG+AGG - chr7_1:67458773-67458792 None:intergenic 60.0%
!! GGATGGTGGGTTCCACTGAG+GGG - chr7_1:67458957-67458976 None:intergenic 60.0%
CTCTCACACATCTCCTCCGC+CGG + chr7_1:67458999-67459018 Msa1032510:CDS 60.0%
TGGGAGGAAAACCATCGGCG+GGG - chr7_1:67459034-67459053 None:intergenic 60.0%
GTGGGAGGAAAACCATCGGC+GGG - chr7_1:67459035-67459054 None:intergenic 60.0%
GGTGGGAGGAAAACCATCGG+CGG - chr7_1:67459036-67459055 None:intergenic 60.0%
! GCCGATGGTTTTCCTCCCAC+CGG + chr7_1:67459035-67459054 Msa1032510:CDS 60.0%
GCCGGTGGGAGGAAAACCAT+CGG - chr7_1:67459039-67459058 None:intergenic 60.0%
TTCAGCCTGCGGCAATTCGC+CGG - chr7_1:67459057-67459076 None:intergenic 60.0%
!! GGGTGAGTAGGGGGTGCTTT+AGG + chr7_1:67459974-67459993 Msa1032510:intron 60.0%
TCGCTCTGGCGGCAGTTCTA+TGG - chr7_1:67460227-67460246 None:intergenic 60.0%
GGAGGTCCTGGACTCTGTTC+AGG - chr7_1:67463177-67463196 None:intergenic 60.0%
GGTCAGGGAACCGGATCCTT+TGG + chr7_1:67463386-67463405 Msa1032510:CDS 60.0%
CCTCTCTGCCTTTGCCTCCT+CGG - chr7_1:67463418-67463437 None:intergenic 60.0%
AGGAGGCAAAGGCAGAGAGG+TGG + chr7_1:67463418-67463437 Msa1032510:CDS 60.0%
!! CCGCCCATTTTTGCCGGAGG+AGG - chr7_1:67458723-67458742 None:intergenic 65.0%
ATCGGCGGGGGATGTGTAGC+CGG - chr7_1:67459021-67459040 None:intergenic 65.0%
GGGAGGAAAACCATCGGCGG+GGG - chr7_1:67459033-67459052 None:intergenic 65.0%
CGGTGTGATTGCAAGCGGCC+TGG + chr7_1:67462181-67462200 Msa1032510:CDS 65.0%
GGGATCAGCGGTCAGGGAAC+CGG + chr7_1:67463377-67463396 Msa1032510:CDS 65.0%
CCGAGGAGGCAAAGGCAGAG+AGG + chr7_1:67463415-67463434 Msa1032510:CDS 65.0%
!! GCGCCGCCCATTTTTGCCGG+AGG - chr7_1:67458726-67458745 None:intergenic 70.0%
!! GCGGCGCCGCCCATTTTTGC+CGG - chr7_1:67458729-67458748 None:intergenic 70.0%
GGCTACACATCCCCCGCCGA+TGG + chr7_1:67459020-67459039 Msa1032510:CDS 70.0%
TGCGGCAATTCGCCGGTGGG+AGG - chr7_1:67459050-67459069 None:intergenic 70.0%
TCCCACCGGCGAATTGCCGC+AGG + chr7_1:67459049-67459068 Msa1032510:CDS 70.0%
GCCTGCGGCAATTCGCCGGT+GGG - chr7_1:67459053-67459072 None:intergenic 70.0%
AGCCTGCGGCAATTCGCCGG+TGG - chr7_1:67459054-67459073 None:intergenic 70.0%
GGGGGATGTGTAGCCGGCGG+AGG - chr7_1:67459015-67459034 None:intergenic 75.0%
GGCGGGGGATGTGTAGCCGG+CGG - chr7_1:67459018-67459037 None:intergenic 75.0%
! TGGGCGGCGCCGCCTCCCCA+AGG + chr7_1:67458736-67458755 Msa1032510:CDS 85.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 67458521 67463956 67458521 ID=Msa1032510;Name=Msa1032510
chr7_1 mRNA 67458521 67463956 67458521 ID=Msa1032510-mRNA-1;Parent=Msa1032510;Name=Msa1032510-mRNA-1;_AED=0.06;_eAED=0.06;_QI=214|1|1|1|1|1|5|300|801
chr7_1 exon 67458521 67459123 67458521 ID=Msa1032510-mRNA-1:exon:15480;Parent=Msa1032510-mRNA-1
chr7_1 exon 67459211 67459328 67459211 ID=Msa1032510-mRNA-1:exon:15481;Parent=Msa1032510-mRNA-1
chr7_1 exon 67461501 67461784 67461501 ID=Msa1032510-mRNA-1:exon:15482;Parent=Msa1032510-mRNA-1
chr7_1 exon 67461961 67462059 67461961 ID=Msa1032510-mRNA-1:exon:15483;Parent=Msa1032510-mRNA-1
chr7_1 exon 67462141 67463956 67462141 ID=Msa1032510-mRNA-1:exon:15484;Parent=Msa1032510-mRNA-1
chr7_1 five_prime_UTR 67458521 67458734 67458521 ID=Msa1032510-mRNA-1:five_prime_utr;Parent=Msa1032510-mRNA-1
chr7_1 CDS 67458735 67459123 67458735 ID=Msa1032510-mRNA-1:cds;Parent=Msa1032510-mRNA-1
chr7_1 CDS 67459211 67459328 67459211 ID=Msa1032510-mRNA-1:cds;Parent=Msa1032510-mRNA-1
chr7_1 CDS 67461501 67461784 67461501 ID=Msa1032510-mRNA-1:cds;Parent=Msa1032510-mRNA-1
chr7_1 CDS 67461961 67462059 67461961 ID=Msa1032510-mRNA-1:cds;Parent=Msa1032510-mRNA-1
chr7_1 CDS 67462141 67463656 67462141 ID=Msa1032510-mRNA-1:cds;Parent=Msa1032510-mRNA-1
chr7_1 three_prime_UTR 67463657 67463956 67463657 ID=Msa1032510-mRNA-1:three_prime_utr;Parent=Msa1032510-mRNA-1
Gene Sequence

>Msa1032510

ATGGGCGGCGCCGCCTCCCCAAGGTTCATCTTCTTCCTCCGCCACAATATCCGTCTCCTCTCTCCCTCTTTCTCCTCTCATTTCCACCACCGCACTCTCTTTTCTTCATTCACTCGCTCTCCTACTTCTTCTTCTTCTTCTCTCACACCAAAACTCAAACTCAAAGCCTCACAACACCACCACCAACAACAACACATTCACACCCAACCTTCACAATCTCCCCTCAGTGGAACCCACCATCCATGGCCAGAGTTTTCCAGATTTCTCTCACACATCTCCTCCGCCGGCTACACATCCCCCGCCGATGGTTTTCCTCCCACCGGCGAATTGCCGCAGGCTGAAGTCAGTGCTTGCTTGTCTTTCGCTCGAGATAGACCTAACCTTCTCAGGTTGCTTTCGATCAGAGACGTTGCCGTTGTGGTTGAACATGGTACTCCGTTTATGTTCTCCGACTCGCAGGATTCTGTTTCCAAGATGAAGTCTTTTCTATCCAACGGTGACTCCACTGCCTTGGACTCTGATAAAGCAAATATGGTTGATCTGATGAAATTTATGCTGAGTTATGCAAGTAGCTGCTTGGTCTCTTCAGAAAGGAACAATCTTTATAACAGAAATCTTGTTGAATCCTCCGTCAGAAACCTATTTGGTGAACTTTTCAAGCTGAGTTATAGTACACCTGGACCCAACTCTTTTGATTCAGTGCAAAATCAAATACCTGGTGGTAGATTTGAGCGTACAATGCCTCCCGGACAAAACATTGAAATGAAAAGGGGTGATTGGATTTGCCTAAGGTGTAGTTTCATGAATTTTGCAAGAAATATGAAATGTCTTGAATGTGAAGAAGCAAGGCCAAAAAGGCAACTGACTGGAGGAGAATGGGAATGTCCTCAGTGTGATTTTCATAATTATGGGAGGAATGTAGCTTGCTTACGGTGTGATTGCAAGCGGCCTGGACAAATATCTTTGGGTTCCACCAATACCACATCACATCCAGGGTATGGAAATGTAAACCATTCTAATACTTCAGATATTGATGCTAGGTTGGTGGCTAATGAAGAGAAGGCACGACGTTGGTTTAACAAGGTTTCTCAACTAGACAGCAACTCTGATATTAACAGTGTGATACATGATGAAGATTTTCCGGAAATAATGCCGTTAAGGAAAGGAGTTAATAGATTTGTTGTAAGCATGAGGAAAACTCCACTGGAGAGGAGGTTGACCAATGCTCAATACAAGAGAAGCTTGGGAAATAACGACGCTCCCGAAGTTGAGGACTATAAAACTGGGGAGTCAGCCAAGTCTCGTGATACTCTGGACGACATTCTAGGTCGTTCAACTGGCCCTCCTCGATCTGACTACAAAAACATGGGTGCTGAACAAAATTTCAGTGGAGAAAGACAACCGTCAATTGCTAGCAATACATCACATTTCCAAGATGTGAAAGGGAACAACACTAATACTCTTTCCCCTTTTCCATCATATGCCAGTTCTGGTGACACTGACAGTACACAACTTTCTAATAACTTTTCAAGTGAAAATGTCATCAAGGACAAAGAGAGTGAGCAAGCTGAAAAATCTGATAGATGGTTTAGAAAGATTGCGGAGCTGAATGATGTTCCAGATATAACAAGTGCAATATCCGATGATGATTTCCCTGAAATGATGCCAATGCGTAAAGGAGAAAATCGATTTGTTGTTAGCAAGAAAAAGGATCGGTCCTTGACAACACCAGCATATAAGAGACGTTTGGCCATGGAGCAATCTGGTAATACTAACTTTGTCCCCTTTGTACCCTTTCCCCCAGATTACTTTGCCAAAAAGGAAAAACCACAGGCAGATGGAACAAATTCAACAGACAGGTCCAGTGTTGAATCATCCTCAGTATCTGAAGGGACTGAGATGTCAGGTGATGCTACAGCTAGACCTGAACAGAGTCCAGGACCTCCTTCTGATCAGATCTCAAGTAAAAACAATCATATTGGTTCTACTTATGCGGCTTCAAGCAGTGGAAATTCAAGTCAGGATTTCAATCAAGATCATGTGCCAAATCTGACCGAGAGTTCATCCACAGGTTCAGCATCTGAGAACCAGAGTGTTGGAACAGAATGGTCAGGGAAAAGTTTAGAGGGATCAGCGGTCAGGGAACCGGATCCTTTGGATATGTCCGAGGAGGCAAAGGCAGAGAGGTGGTTCCGTCGTGTTGCCCAAATTAAGGATATTTCTGAGCTCAGTCAGATTCCAGACGAAGATTTTCCTTCAATAATGCCTATGCGTAAAGGGGTGAACAGATTCGTTGTGAGCAAGCGGAAAACACCACTGGAAAGGAGATTGACATCTCAGCAGTACCGAAGAAATCTTCCAGTTGTGAGCTCAGATCCTGTCAAGAGAGAAAATGAAGGTAGCTGA
Protein sequence

>Msa1032510

MGGAASPRFIFFLRHNIRLLSPSFSSHFHHRTLFSSFTRSPTSSSSSLTPKLKLKASQHHHQQQHIHTQPSQSPLSGTHHPWPEFSRFLSHISSAGYTSPADGFPPTGELPQAEVSACLSFARDRPNLLRLLSIRDVAVVVEHGTPFMFSDSQDSVSKMKSFLSNGDSTALDSDKANMVDLMKFMLSYASSCLVSSERNNLYNRNLVESSVRNLFGELFKLSYSTPGPNSFDSVQNQIPGGRFERTMPPGQNIEMKRGDWICLRCSFMNFARNMKCLECEEARPKRQLTGGEWECPQCDFHNYGRNVACLRCDCKRPGQISLGSTNTTSHPGYGNVNHSNTSDIDARLVANEEKARRWFNKVSQLDSNSDINSVIHDEDFPEIMPLRKGVNRFVVSMRKTPLERRLTNAQYKRSLGNNDAPEVEDYKTGESAKSRDTLDDILGRSTGPPRSDYKNMGAEQNFSGERQPSIASNTSHFQDVKGNNTNTLSPFPSYASSGDTDSTQLSNNFSSENVIKDKESEQAEKSDRWFRKIAELNDVPDITSAISDDDFPEMMPMRKGENRFVVSKKKDRSLTTPAYKRRLAMEQSGNTNFVPFVPFPPDYFAKKEKPQADGTNSTDRSSVESSSVSEGTEMSGDATARPEQSPGPPSDQISSKNNHIGSTYAASSSGNSSQDFNQDHVPNLTESSSTGSASENQSVGTEWSGKSLEGSAVREPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPVVSSDPVKRENEGS*