AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1159880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1159880 MtrunA17_Chr7g0256951 54.851 268 80 8 1 230 1 265 1.45e-75 241
Msa1159880 MtrunA17_Chr7g0256951 57.823 147 27 2 412 523 6 152 2.18e-40 148
Msa1159880 MtrunA17_Chr7g0256951 45.283 159 57 2 257 385 45 203 1.02e-25 107
Msa1159880 MtrunA17_Chr5g0421501 48.561 278 83 8 1 241 1 255 1.03e-65 219
Msa1159880 MtrunA17_Chr5g0421501 43.972 141 51 1 257 369 49 189 3.77e-26 110
Msa1159880 MtrunA17_Chr5g0421501 39.766 171 70 2 404 541 2 172 4.29e-23 101
Msa1159880 MtrunA17_Chr5g0415991 46.067 267 106 7 1 230 1 266 1.58e-55 193
Msa1159880 MtrunA17_Chr5g0415991 39.007 141 54 3 259 369 51 189 1.62e-17 85.1
Msa1159880 MtrunA17_Chr8g0385451 41.445 263 97 10 1 230 1 239 2.00e-40 147
Msa1159880 MtrunA17_Chr8g0385451 45.000 80 39 3 257 335 49 124 7.64e-12 65.9
Msa1159880 MtrunA17_Chr5g0421511 41.071 224 100 5 1 192 1 224 2.37e-40 147
Msa1159880 MtrunA17_Chr5g0421511 41.007 139 50 3 257 365 49 185 9.40e-23 97.8
Msa1159880 MtrunA17_Chr5g0421511 34.545 165 65 4 404 532 2 159 1.30e-17 82.8
Msa1159880 MtrunA17_Chr8g0348211 46.821 173 54 8 79 237 7 155 3.63e-28 114
Msa1159880 MtrunA17_Chr0c03g0490011 36.087 230 113 8 14 214 8 232 9.52e-25 107
Msa1159880 MtrunA17_Chr1g0148661 36.816 201 101 4 14 188 18 218 6.95e-22 96.3
Msa1159880 MtrunA17_Chr2g0303241 36.538 208 102 5 14 191 21 228 6.66e-21 95.9
Msa1159880 MtrunA17_Chr2g0303231 37.681 207 97 7 14 188 25 231 2.79e-20 93.6
Msa1159880 MtrunA17_Chr1g0148651 35.610 205 100 4 14 188 326 528 3.54e-20 94.7
Msa1159880 MtrunA17_Chr1g0148651 34.921 189 105 5 14 188 7 191 3.01e-18 88.6
Msa1159880 MtrunA17_Chr4g0028401 32.719 217 100 5 12 188 17 227 1.85e-18 88.2
Msa1159880 MtrunA17_Chr1g0154461 31.646 237 131 7 8 215 22 256 2.00e-18 88.2
Msa1159880 MtrunA17_Chr1g0154471 31.982 222 121 5 14 207 17 236 4.87e-18 87.0
Msa1159880 MtrunA17_Chr1g0150401 32.857 210 107 4 12 187 17 226 7.26e-15 77.0
Msa1159880 MtrunA17_Chr5g0417271 32.367 207 106 5 14 186 7 213 1.02e-13 73.6
Msa1159880 MtrunA17_Chr1g0149921 29.439 214 114 4 14 191 43 255 1.18e-12 70.5
Msa1159880 MtrunA17_Chr4g0041581 31.959 194 94 8 11 172 20 207 9.50e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1159880 AT3G50710.1 27.465 284 137 13 13 231 1 280 4.10e-15 78.2
Msa1159880 AT1G78750.2 29.703 202 102 8 6 170 10 208 4.75e-13 72.0
Msa1159880 AT1G78750.1 29.703 202 102 8 6 170 10 208 4.75e-13 72.0
Msa1159880 AT3G26922.1 28.745 247 125 8 14 209 14 260 6.83e-13 70.1
Msa1159880 AT3G26922.2 28.745 247 125 8 14 209 14 260 6.83e-13 70.1
Msa1159880 AT1G69630.1 27.461 193 111 7 6 170 10 201 1.28e-12 70.5
Msa1159880 AT1G51370.2 31.720 186 95 8 7 167 13 191 2.66e-12 68.9
Msa1159880 AT1G51370.1 31.720 186 95 8 7 167 13 191 3.14e-12 69.3
Msa1159880 AT1G51370.3 31.720 186 95 8 7 167 13 191 3.17e-12 69.3
Msa1159880 AT2G04230.1 28.090 267 127 13 14 217 13 277 2.06e-11 67.0
Msa1159880 AT1G78840.1 28.458 253 128 12 19 233 11 248 3.37e-11 66.2
Msa1159880 AT1G78840.2 28.458 253 128 12 19 233 11 248 3.37e-11 66.2
Msa1159880 AT5G44950.1 27.473 182 106 5 14 169 4 185 3.73e-11 65.9
Msa1159880 AT1G80960.5 25.442 283 170 8 12 272 48 311 3.94e-11 65.9
Msa1159880 AT3G58860.1 30.000 190 100 5 11 167 4 193 7.84e-11 65.1
Msa1159880 AT5G56420.1 26.829 205 122 7 14 190 6 210 9.09e-11 64.7
Msa1159880 AT5G56420.2 26.829 205 122 7 14 190 6 210 9.09e-11 64.7
Msa1159880 AT5G56420.3 26.829 205 122 7 14 190 6 210 9.09e-11 64.7

Find 88 sgRNAs with CRISPR-Local

Find 730 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACTTAGGGTCTTATTTC+TGG 0.096509 7_4:+49610652 Msa1159880:CDS
GTACTTGAGAGTCTTATTTC+TGG 0.211583 7_4:+49607616 Msa1159880:intron
TTAATACTCCTCGACAAAAT+AGG 0.221838 7_4:-49607415 None:intergenic
GATCTTAGACTCACAGTATC+TGG 0.289709 7_4:+49607784 Msa1159880:CDS
GTGATAACTTTAGAAGTTAC+AGG 0.291798 7_4:-49607289 None:intergenic
CTTGTGCTTGTAGTTCTCTT+AGG 0.308244 7_4:+49620246 Msa1159880:intron
TTGACATTCTTTACATTTGC+CGG 0.321794 7_4:+49607508 Msa1159880:CDS
TGATAAACTTGCTGCTCAAT+TGG 0.332882 7_4:-49608848 None:intergenic
CTCCCACTCTCAAAGTCTTA+TGG 0.350449 7_4:+49607704 Msa1159880:CDS
TTTGATCGAGATGTTTGTTC+TGG 0.354077 7_4:-49607456 None:intergenic
GCATCAAATTCAAAATATTC+AGG 0.356102 7_4:-49607682 None:intergenic
TTTCTAACCTTGGTATTGTA+AGG 0.365718 7_4:-49607856 None:intergenic
TAATACTCCTCGACAAAATA+GGG 0.373617 7_4:-49607414 None:intergenic
TTACAAGAGAGGACAATATA+TGG 0.380411 7_4:-49620690 None:intergenic
TGTACATCAAAGACCTAGTT+AGG 0.389200 7_4:+49607161 Msa1159880:CDS
ATACATTGTCTTCTCTTGTA+AGG 0.390569 7_4:+49607483 Msa1159880:CDS
CTTATTGTCTGTTACATTCG+AGG 0.413736 7_4:+49607588 Msa1159880:CDS
ATTCGAGTCCGGTGCACTTA+GGG 0.421894 7_4:+49610640 Msa1159880:CDS
ACTTTAGAAGTTACAGGGCC+AGG 0.432101 7_4:-49607283 None:intergenic
GATAAACTTGCTGCTCAATT+GGG 0.444995 7_4:-49608847 None:intergenic
ATATATTGTCCTCTCTTGTA+AGG 0.446509 7_4:+49620692 Msa1159880:CDS
TTAAAGCCGCATAAATTATG+TGG 0.447479 7_4:-49610584 None:intergenic
TCAGCCCCACAACTTTGGTT+TGG 0.450059 7_4:+49610254 Msa1159880:CDS
TCAATTCCACCTGATTTCTG+TGG 0.455231 7_4:+49620749 Msa1159880:CDS
CAATTCCACCTGATTTCTGT+GGG 0.455896 7_4:+49620750 Msa1159880:CDS
CATTCGAGTCCGGTGCACTT+AGG 0.457598 7_4:+49610639 Msa1159880:CDS
GGACTTCAGCCCCACAACTT+TGG 0.461047 7_4:+49610249 Msa1159880:CDS
TAATTGAATTCCTCAGTAAG+TGG 0.464371 7_4:+49610420 Msa1159880:CDS
CAATTGAACACCTCGATACA+TGG 0.464888 7_4:+49620595 Msa1159880:CDS
ATCTTGAAATTGTAGTCATA+AGG 0.483996 7_4:-49610395 None:intergenic
AAAGGGCCGATAGATAAGTT+TGG 0.485875 7_4:+49620537 Msa1159880:CDS
TTACAAGAGAAGACAATGTA+TGG 0.487113 7_4:-49607481 None:intergenic
TCTAATGTTACATTCGAGTC+CGG 0.502069 7_4:+49610629 Msa1159880:CDS
TGGAATTGACAGGTTAAATC+CGG 0.503112 7_4:-49607527 None:intergenic
CTTCGCCAAACCAAAGTTGT+GGG 0.505150 7_4:-49610259 None:intergenic
CTTTGATGTACAAGCGTGCT+AGG 0.506024 7_4:-49607150 None:intergenic
TTGTTTGTTAGATTCAAGCC+TGG 0.512689 7_4:+49620800 Msa1159880:CDS
CTACAATTTCAAGATCTCAA+TGG 0.512699 7_4:+49607372 Msa1159880:intron
GGAGGGATATTAAACATCTC+GGG 0.513210 7_4:+49610459 Msa1159880:CDS
TCTTGTTAGACAGAGTCATA+AGG 0.516788 7_4:-49607066 None:intergenic
AGGAGGGATATTAAACATCT+CGG 0.517682 7_4:+49610458 Msa1159880:CDS
ATAAGACTCTTGTGTGAACC+AGG 0.520185 7_4:-49620818 None:intergenic
TTTGATGAATATGAGGATCT+CGG 0.520858 7_4:+49620468 Msa1159880:intron
CATCGTCAAACCGAAGTTGT+GGG 0.523522 7_4:-49607228 None:intergenic
AAAAGACCAAACTTATCTAT+CGG 0.530746 7_4:-49620543 None:intergenic
AAAAGATGAAACTTATGTAT+CGG 0.537097 7_4:-49610368 None:intergenic
GGATTTCGTGTTTGTCAAAG+AGG 0.543677 7_4:+49620616 Msa1159880:CDS
ATGTTCTAGTGCAACACAAA+GGG 0.545705 7_4:+49620520 Msa1159880:CDS
AGAAATCAGGTGGAATTGAC+AGG 0.547647 7_4:-49607537 None:intergenic
ACAAAATACTAGTCCTAACT+AGG 0.547719 7_4:-49607174 None:intergenic
CTTTAGAAGTTACAGGGCCA+GGG 0.547725 7_4:-49607282 None:intergenic
TCGATCAATATGATCATGAC+TGG 0.548556 7_4:-49607092 None:intergenic
TTGTCTGTTACATTCGAGGC+CGG 0.555309 7_4:+49607592 Msa1159880:CDS
ATATTGAGTGTTTGAAGTAA+CGG 0.555407 7_4:-49607643 None:intergenic
GGACCTCCGTCCCACAACTT+CGG 0.559824 7_4:+49607218 Msa1159880:CDS
TCATCGTCAAACCGAAGTTG+TGG 0.564883 7_4:-49607229 None:intergenic
ATGTCATCAATAACATTACA+TGG 0.569407 7_4:-49607127 None:intergenic
TCAATTCCACATAATTTATG+CGG 0.577530 7_4:+49610578 Msa1159880:CDS
ATTGATAAGACTTCAAGAGT+AGG 0.577808 7_4:-49620914 None:intergenic
TCAATTCCACCTGATTTCTG+CGG 0.580662 7_4:+49607541 Msa1159880:CDS
ATGCCGTCAGTGACATTGCA+TGG 0.585348 7_4:-49620332 None:intergenic
GATTTCGTGTTTGTCAAAGA+GGG 0.591597 7_4:+49620617 Msa1159880:CDS
TATGACTCTGTCTAACAAGA+AGG 0.594809 7_4:+49607069 Msa1159880:exon
TCTTCGCCAAACCAAAGTTG+TGG 0.603798 7_4:-49610260 None:intergenic
GTCAAGATGATGATACTGAT+CGG 0.604281 7_4:+49620297 Msa1159880:CDS
TAGCCATAAGACTTTGAGAG+TGG 0.604440 7_4:-49607707 None:intergenic
CTCAATATTGATGATTGTTG+TGG 0.606442 7_4:+49607658 Msa1159880:CDS
AAATAAGACCCTAAGTGCAC+CGG 0.614908 7_4:-49610648 None:intergenic
TTACCATGCAATGTCACTGA+CGG 0.623357 7_4:+49620329 Msa1159880:CDS
TTAAACCCACAGAAATCAGG+TGG 0.623367 7_4:-49620755 None:intergenic
TACAAGGATCTCGATGACCC+TGG 0.628885 7_4:+49610296 Msa1159880:CDS
AAGTCAATTCCTTACAAGAG+AGG 0.631447 7_4:-49620701 None:intergenic
TACGAGAATCTCGATGACCC+TGG 0.632706 7_4:+49607265 Msa1159880:CDS
TTAAAGCCGCAGAAATCAGG+TGG 0.633570 7_4:-49607547 None:intergenic
CAATGGAATACATTGATACG+TGG 0.634498 7_4:+49607389 Msa1159880:CDS
GATGTTCTAGTGCAACACAA+AGG 0.635357 7_4:+49620519 Msa1159880:CDS
AAAACATAATCCACTTACTG+AGG 0.637114 7_4:-49610430 None:intergenic
TGATAACTTTAGAAGTTACA+GGG 0.637833 7_4:-49607288 None:intergenic
CTGTCAGCCTTACAATACCA+AGG 0.642670 7_4:+49607849 Msa1159880:CDS
AGCCATAAGACTTTGAGAGT+GGG 0.644910 7_4:-49607706 None:intergenic
AGCAATAAGACTTTGAGAGT+AGG 0.651992 7_4:-49610742 None:intergenic
ACACTTGAAAATCAAAGACC+TGG 0.656744 7_4:+49620361 Msa1159880:CDS
GTCAAACCGAAGTTGTGGGA+CGG 0.658111 7_4:-49607224 None:intergenic
ATCTTGAATTTGTAGTCATG+AGG 0.667264 7_4:-49620570 None:intergenic
TTCGCCAAACCAAAGTTGTG+GGG 0.675315 7_4:-49610258 None:intergenic
AAACCGAAGTTGTGGGACGG+AGG 0.683191 7_4:-49607221 None:intergenic
AACACGAAATCCATGTATCG+AGG 0.686214 7_4:-49620605 None:intergenic
TCTAACACTTGAGGTATACG+TGG 0.698497 7_4:+49610228 Msa1159880:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATTATTATTATTA+TGG + chr7_4:49615329-49615348 Msa1159880:intron 0.0%
!!! TATATTTATTATTTTTCAGT+TGG + chr7_4:49607898-49607917 Msa1159880:intron 10.0%
!!! ATATTTATTATTTTTCAGTT+GGG + chr7_4:49607899-49607918 Msa1159880:intron 10.0%
!!! AAATTTTATAATAAATAACC+AGG + chr7_4:49609071-49609090 Msa1159880:intron 10.0%
!!! AATTTTATAATAAATAACCA+GGG + chr7_4:49609072-49609091 Msa1159880:intron 10.0%
!!! TTTTGAAATATTTATTCATT+TGG + chr7_4:49609647-49609666 Msa1159880:intron 10.0%
!!! TTTGAAATATTTATTCATTT+GGG + chr7_4:49609648-49609667 Msa1159880:intron 10.0%
!!! AAATATGCATTTTTTTTATT+AGG - chr7_4:49611219-49611238 None:intergenic 10.0%
!!! AATAAACTTTTTTTAAAAAG+AGG + chr7_4:49611381-49611400 Msa1159880:intron 10.0%
!! TTAATATATTATTACTCTTT+AGG - chr7_4:49611430-49611449 None:intergenic 10.0%
!! AGTAATAATATATTAAAAAC+AGG + chr7_4:49611434-49611453 Msa1159880:intron 10.0%
!!! AAGATATTTTTAGATATTTT+GGG - chr7_4:49618100-49618119 None:intergenic 10.0%
!!! TGTTTGATATTTTGTATATT+TGG + chr7_4:49609118-49609137 Msa1159880:intron 15.0%
!! TTCTATCAATAAAAATTCAT+TGG - chr7_4:49609606-49609625 None:intergenic 15.0%
!! TTGAAATATTTATTCATTTG+GGG + chr7_4:49609649-49609668 Msa1159880:intron 15.0%
!! ATAATATATTAAAAACAGGT+TGG + chr7_4:49611438-49611457 Msa1159880:intron 15.0%
!! TCAAACTTAAATTTCAATAT+AGG - chr7_4:49611741-49611760 None:intergenic 15.0%
!!! GCTTTCAATATTTTTTTTTT+TGG + chr7_4:49612069-49612088 Msa1159880:intron 15.0%
!!! ACTTAACAACTTTTTTTTTT+TGG - chr7_4:49612391-49612410 None:intergenic 15.0%
!!! TTGTAATCTTTTCATAATAA+GGG + chr7_4:49612486-49612505 Msa1159880:intron 15.0%
!!! TTGTAATCTTTTCATAATAA+GGG + chr7_4:49612486-49612505 Msa1159880:intron 15.0%
!!! AATCTATCTTTTTCATTAAA+AGG + chr7_4:49613711-49613730 Msa1159880:intron 15.0%
!!! ATCTATCTTTTTCATTAAAA+GGG + chr7_4:49613712-49613731 Msa1159880:intron 15.0%
!! AAAGAACTTAATAATTGAAT+CGG + chr7_4:49614893-49614912 Msa1159880:intron 15.0%
!! CTATGATCTATTAATTATTA+TGG + chr7_4:49615305-49615324 Msa1159880:intron 15.0%
!! ATAACTATGATTTATTGTAT+AGG + chr7_4:49615445-49615464 Msa1159880:intron 15.0%
!! AATAACTGTGATTTATTATT+AGG + chr7_4:49615523-49615542 Msa1159880:intron 15.0%
!! ATAACTGTGATTTATTATTA+GGG + chr7_4:49615524-49615543 Msa1159880:intron 15.0%
!! ATCACTATGATTTATTATTA+GGG + chr7_4:49615596-49615615 Msa1159880:intron 15.0%
!! AAGTGAAAATACAAAAATTA+GGG - chr7_4:49616129-49616148 None:intergenic 15.0%
!! TATATATTAGTAGTTCATTA+GGG - chr7_4:49618065-49618084 None:intergenic 15.0%
!! ATATATATTAGTAGTTCATT+AGG - chr7_4:49618066-49618085 None:intergenic 15.0%
!!! GAAGATATTTTTAGATATTT+TGG - chr7_4:49618101-49618120 None:intergenic 15.0%
!! AATATCTAAAAATATCTTCA+AGG + chr7_4:49618102-49618121 Msa1159880:intron 15.0%
!!! TAATTTGAAATAGTTGTAAA+AGG + chr7_4:49619612-49619631 Msa1159880:intron 15.0%
!!! ATATTCATCAAAAAAAGTAT+TGG - chr7_4:49620460-49620479 None:intergenic 15.0%
!!! ATATGAAGATTTTTAAGTAA+CGG - chr7_4:49620854-49620873 None:intergenic 15.0%
!! ATATGTCATGATATTAGAAT+CGG - chr7_4:49608940-49608959 None:intergenic 20.0%
!!! TGATATTTTGTATATTTGGT+TGG + chr7_4:49609122-49609141 Msa1159880:intron 20.0%
!!! AGACATTATAGATTTTGTTT+AGG + chr7_4:49609165-49609184 Msa1159880:intron 20.0%
!! CATTACACACAAAAAAATAT+AGG - chr7_4:49609323-49609342 None:intergenic 20.0%
!!! AATCAAAAACTAAATTTGCT+AGG - chr7_4:49609449-49609468 None:intergenic 20.0%
!! ATATAATAAATAAAGCCTGT+TGG + chr7_4:49609959-49609978 Msa1159880:intron 20.0%
!! TTATATTGTCATCATTAACA+TGG - chr7_4:49610074-49610093 None:intergenic 20.0%
!! AAAAGATGAAACTTATGTAT+CGG - chr7_4:49610371-49610390 None:intergenic 20.0%
!! AATTATTTGATCTTACAATC+AGG + chr7_4:49610811-49610830 Msa1159880:intron 20.0%
!! ATTATTTGATCTTACAATCA+GGG + chr7_4:49610812-49610831 Msa1159880:intron 20.0%
!! TGGAAAAAAAATTATAAGAC+CGG - chr7_4:49610856-49610875 None:intergenic 20.0%
!! ATGTAAATATACTACGATTA+AGG - chr7_4:49610889-49610908 None:intergenic 20.0%
!! GATGAGATACTAATATATTA+AGG - chr7_4:49611683-49611702 None:intergenic 20.0%
!!! ACTTGTTTTATTGTTTAATC+TGG + chr7_4:49611961-49611980 Msa1159880:intron 20.0%
!!! CTTGTTTTATTGTTTAATCT+GGG + chr7_4:49611962-49611981 Msa1159880:intron 20.0%
!!! AACTTTTTTTTTTTGGTAGA+TGG - chr7_4:49612384-49612403 None:intergenic 20.0%
!!! CTTGTAATCTTTTCATAATA+AGG + chr7_4:49612485-49612504 Msa1159880:intron 20.0%
!!! CTTGTAATCTTTTCATAATA+AGG + chr7_4:49612485-49612504 Msa1159880:intron 20.0%
!!! ATGAATTTTAATTAACCACT+AGG - chr7_4:49612630-49612649 None:intergenic 20.0%
!!! ATTTTTTAAGGTGAATAAGT+AGG + chr7_4:49612648-49612667 Msa1159880:intron 20.0%
!! AAAAAAAAACCAAAGAATAC+TGG - chr7_4:49613563-49613582 None:intergenic 20.0%
!!! TCTTTGGTTTTTTTTTTTGA+AGG + chr7_4:49613567-49613586 Msa1159880:intron 20.0%
!!! CTTTGGTTTTTTTTTTTGAA+GGG + chr7_4:49613568-49613587 Msa1159880:intron 20.0%
!! TAAACAATATTCCAACATAT+TGG - chr7_4:49613665-49613684 None:intergenic 20.0%
!!! AGATTGTCTAAAATAAAACT+TGG - chr7_4:49613696-49613715 None:intergenic 20.0%
!! CTAATTACTGTAATGTAAAT+AGG + chr7_4:49614980-49614999 Msa1159880:intron 20.0%
!! ATTTCGACAAACATAAAATA+CGG + chr7_4:49615138-49615157 Msa1159880:intron 20.0%
!!! TCAATTTTTTCTGTAAGTAA+AGG + chr7_4:49615209-49615228 Msa1159880:intron 20.0%
!! TTATTATTCAATTGTGCAAA+TGG - chr7_4:49615508-49615527 None:intergenic 20.0%
!! GATCACTATGATTTATTATT+AGG + chr7_4:49615595-49615614 Msa1159880:intron 20.0%
!! AAGAAAATATAAGATATGCT+AGG + chr7_4:49615636-49615655 Msa1159880:intron 20.0%
!! TAAAACTAATTTCAGTCAAA+TGG - chr7_4:49615713-49615732 None:intergenic 20.0%
!!! TGACTGAAATTAGTTTTATT+TGG + chr7_4:49615715-49615734 Msa1159880:intron 20.0%
!!! TCTCAAATACAATCAATTTT+CGG + chr7_4:49616081-49616100 Msa1159880:intron 20.0%
!! GAAGTGAAAATACAAAAATT+AGG - chr7_4:49616130-49616149 None:intergenic 20.0%
!! AGTAAAAGTTGAGATAAATA+AGG + chr7_4:49617343-49617362 Msa1159880:intron 20.0%
!! AATTAAGAGTTAAATGCTTT+CGG - chr7_4:49617603-49617622 None:intergenic 20.0%
!! AAGCATTTAACTCTTAATTA+TGG + chr7_4:49617604-49617623 Msa1159880:intron 20.0%
!! AATATCTTAGAGAGAAAATA+GGG - chr7_4:49617983-49618002 None:intergenic 20.0%
!! TAATATCTTAGAGAGAAAAT+AGG - chr7_4:49617984-49618003 None:intergenic 20.0%
!! ATATATTAGTAGTTCATTAG+GGG - chr7_4:49618064-49618083 None:intergenic 20.0%
!!! ATCATGAAAAAGTACTATTT+TGG - chr7_4:49618273-49618292 None:intergenic 20.0%
!!! TTTTATATTGCTGTCAATAA+TGG + chr7_4:49618697-49618716 Msa1159880:intron 20.0%
!!! GATATTTTTGGAAAATTACT+GGG + chr7_4:49618719-49618738 Msa1159880:intron 20.0%
!!! ATATTTTTGGAAAATTACTG+GGG + chr7_4:49618720-49618739 Msa1159880:intron 20.0%
!! TTCTGAGTTTATTATATTAC+TGG + chr7_4:49618922-49618941 Msa1159880:intron 20.0%
!! TCTGAGTTTATTATATTACT+GGG + chr7_4:49618923-49618942 Msa1159880:intron 20.0%
!! CTTATATTTCTTAATTCTAC+AGG + chr7_4:49619158-49619177 Msa1159880:intron 20.0%
!!! TACTTTTTTTGATGAATATG+AGG + chr7_4:49620461-49620480 Msa1159880:intron 20.0%
!!! TATGAAGATTTTTAAGTAAC+GGG - chr7_4:49620853-49620872 None:intergenic 20.0%
! ATGTCATCAATAACATTACA+TGG - chr7_4:49607130-49607149 None:intergenic 25.0%
!! CTAGTATTTTGTCAAAAAAG+TGG + chr7_4:49607185-49607204 Msa1159880:CDS 25.0%
!! TGATAACTTTAGAAGTTACA+GGG - chr7_4:49607291-49607310 None:intergenic 25.0%
! ATCTTGAAATTGTAGTCATA+AGG - chr7_4:49607367-49607386 None:intergenic 25.0%
!! ATATTGAGTGTTTGAAGTAA+CGG - chr7_4:49607646-49607665 None:intergenic 25.0%
! GCATCAAATTCAAAATATTC+AGG - chr7_4:49607685-49607704 None:intergenic 25.0%
!!! CAATGTTGAATTTTGATTGA+CGG + chr7_4:49608094-49608113 Msa1159880:intron 25.0%
!!! AACAATAGATAAGTTGATTC+TGG - chr7_4:49608817-49608836 None:intergenic 25.0%
! ATGATTTACTACTTCAACTA+TGG + chr7_4:49608914-49608933 Msa1159880:intron 25.0%
!! ACTTGATGTTAAACTTTTCT+TGG + chr7_4:49609026-49609045 Msa1159880:intron 25.0%
!! CAGATTTTTAACACAAAAAC+AGG - chr7_4:49609377-49609396 None:intergenic 25.0%
! ACAGTAGTTTAACACAAAAA+TGG - chr7_4:49609405-49609424 None:intergenic 25.0%
!! CAATTCAGATATTTTTCGTA+AGG - chr7_4:49609497-49609516 None:intergenic 25.0%
! TATATAATGAGCTTCTAGTA+AGG - chr7_4:49609944-49609963 None:intergenic 25.0%
! CAATATAAGAATCTGACTTA+AGG + chr7_4:49610086-49610105 Msa1159880:intron 25.0%
! ATCTTGAAATTGTAGTCATA+AGG - chr7_4:49607367-49607386 None:intergenic 25.0%
! TCAATTCCACATAATTTATG+CGG + chr7_4:49610578-49610597 Msa1159880:CDS 25.0%
! TAAATGATCCAACATTTGTA+GGG - chr7_4:49610936-49610955 None:intergenic 25.0%
!!! CTTAATCTTACTTTTAATGC+TGG + chr7_4:49611085-49611104 Msa1159880:intron 25.0%
!!! TTACTTTTAATGCTGGTATT+TGG + chr7_4:49611092-49611111 Msa1159880:intron 25.0%
!!! TTTTTTATTAGGCACCATAA+AGG - chr7_4:49611208-49611227 None:intergenic 25.0%
!!! TTGCATCTTTTGCATTTTTT+AGG + chr7_4:49611626-49611645 Msa1159880:intron 25.0%
! TAAATCTTACCAAATCATGT+CGG - chr7_4:49611830-49611849 None:intergenic 25.0%
!! TTATTGTTTAATCTGGGTTT+TGG + chr7_4:49611968-49611987 Msa1159880:intron 25.0%
!! AGCAAATTCATTAGCATTTT+TGG + chr7_4:49612095-49612114 Msa1159880:intron 25.0%
!! GCAAATTCATTAGCATTTTT+GGG + chr7_4:49612096-49612115 Msa1159880:intron 25.0%
!!! AGATTACAAGAATGTTGTTT+TGG - chr7_4:49612475-49612494 None:intergenic 25.0%
!!! AGATTACAAGAATGTTGTTT+TGG - chr7_4:49612475-49612494 None:intergenic 25.0%
! TTAGTCGAAATGGAATAATT+AGG - chr7_4:49612830-49612849 None:intergenic 25.0%
! ATAATCAAGTACCAATATGT+TGG + chr7_4:49613651-49613670 Msa1159880:intron 25.0%
! AACTATTCAAACAAATGTGT+CGG + chr7_4:49613972-49613991 Msa1159880:intron 25.0%
!! ACTTTTGTATCATTCTGATA+TGG + chr7_4:49614477-49614496 Msa1159880:intron 25.0%
! TGAAAATGATGTATCATGTA+TGG - chr7_4:49614823-49614842 None:intergenic 25.0%
! TACATTACAGTAATTAGTTG+TGG - chr7_4:49614977-49614996 None:intergenic 25.0%
! TTCGTTTCAAATTTCAAAAG+TGG - chr7_4:49615014-49615033 None:intergenic 25.0%
!! ATTCTAAAAACAAAACCTAG+TGG + chr7_4:49615109-49615128 Msa1159880:intron 25.0%
! ATTGCTCTCCAAAAAAAAAA+TGG + chr7_4:49615164-49615183 Msa1159880:intron 25.0%
! AATTTGACAAGTTAGGTTAT+AGG - chr7_4:49616190-49616209 None:intergenic 25.0%
! TAAAGAAACTTGTGAAGAAA+AGG - chr7_4:49616558-49616577 None:intergenic 25.0%
! AGTTTCTTTACTCTTAAAAC+TGG + chr7_4:49616568-49616587 Msa1159880:intron 25.0%
!!! ACTGAACACAATGTTTTATT+TGG + chr7_4:49616794-49616813 Msa1159880:intron 25.0%
!! ATTTGAAATTGAGAAGGATT+TGG - chr7_4:49616968-49616987 None:intergenic 25.0%
! ATCCTTCTCAATTTCAAATT+TGG + chr7_4:49616969-49616988 Msa1159880:intron 25.0%
! ACATATTCAATTACTATTGC+AGG - chr7_4:49617095-49617114 None:intergenic 25.0%
!! AATAAGGATTGAAACTTGTT+AGG + chr7_4:49617359-49617378 Msa1159880:intron 25.0%
! TTATAAAGCTAGAATTCGTA+TGG - chr7_4:49617426-49617445 None:intergenic 25.0%
! TAGAGTTAATTATATCGCTT+TGG - chr7_4:49617488-49617507 None:intergenic 25.0%
! AAGCGATATAATTAACTCTA+AGG + chr7_4:49617488-49617507 Msa1159880:intron 25.0%
! GAAAACTAAGAGAAAAACTA+TGG + chr7_4:49618008-49618027 Msa1159880:intron 25.0%
!! AGCATTTAACACTTATTTCT+CGG + chr7_4:49618367-49618386 Msa1159880:intron 25.0%
! ATCATGAATTTAACACATCT+TGG + chr7_4:49618440-49618459 Msa1159880:intron 25.0%
!!! CTGTCAATAATGGATATTTT+TGG + chr7_4:49618707-49618726 Msa1159880:intron 25.0%
!!! GGATATTTTTGGAAAATTAC+TGG + chr7_4:49618718-49618737 Msa1159880:intron 25.0%
!!! TTTTTTAATCTTACGAATGC+AGG - chr7_4:49618895-49618914 None:intergenic 25.0%
! CTGAGTTTATTATATTACTG+GGG + chr7_4:49618924-49618943 Msa1159880:intron 25.0%
! ATTTCTTAATTCTACAGGTT+TGG + chr7_4:49619163-49619182 Msa1159880:intron 25.0%
! AAGATGTAATTCATTATCAG+TGG - chr7_4:49619237-49619256 None:intergenic 25.0%
!!! TGGTTAGAGTTTTTAGATAA+GGG + chr7_4:49619379-49619398 Msa1159880:intron 25.0%
! GTTTGTGTATTTATTTGTTC+AGG + chr7_4:49619651-49619670 Msa1159880:intron 25.0%
! TGTATTTATTTGTTCAGGAT+TGG + chr7_4:49619656-49619675 Msa1159880:intron 25.0%
! ATTCTACAGCAATAAAATTG+AGG - chr7_4:49619761-49619780 None:intergenic 25.0%
!!! GATTTTAGTTTTACTTGCTA+CGG + chr7_4:49619875-49619894 Msa1159880:intron 25.0%
!!! AGAAAATATGTGATTTGCTA+AGG - chr7_4:49620034-49620053 None:intergenic 25.0%
!! GTGATAATTTTATAAGCTAC+TGG - chr7_4:49620498-49620517 None:intergenic 25.0%
! AAAAGACCAAACTTATCTAT+CGG - chr7_4:49620546-49620565 None:intergenic 25.0%
ACAAAATACTAGTCCTAACT+AGG - chr7_4:49607177-49607196 None:intergenic 30.0%
! GTATTTTGTCAAAAAAGTGG+AGG + chr7_4:49607188-49607207 Msa1159880:CDS 30.0%
! GTGATAACTTTAGAAGTTAC+AGG - chr7_4:49607292-49607311 None:intergenic 30.0%
CTACAATTTCAAGATCTCAA+TGG + chr7_4:49607372-49607391 Msa1159880:intron 30.0%
TAATACTCCTCGACAAAATA+GGG - chr7_4:49607417-49607436 None:intergenic 30.0%
TTAATACTCCTCGACAAAAT+AGG - chr7_4:49607418-49607437 None:intergenic 30.0%
TTACAAGAGAAGACAATGTA+TGG - chr7_4:49607484-49607503 None:intergenic 30.0%
ATACATTGTCTTCTCTTGTA+AGG + chr7_4:49607483-49607502 Msa1159880:CDS 30.0%
TTGACATTCTTTACATTTGC+CGG + chr7_4:49607508-49607527 Msa1159880:CDS 30.0%
! CTCAATATTGATGATTGTTG+TGG + chr7_4:49607658-49607677 Msa1159880:CDS 30.0%
!!! GAAATCCTCTCAATGTTTTT+TGG - chr7_4:49607826-49607845 None:intergenic 30.0%
TTTCTAACCTTGGTATTGTA+AGG - chr7_4:49607859-49607878 None:intergenic 30.0%
! TTCTAGCTGATATGTTAGTT+TGG + chr7_4:49607927-49607946 Msa1159880:intron 30.0%
TTTCAATGTACATGTTGGAT+TGG - chr7_4:49608121-49608140 None:intergenic 30.0%
ACAACTTTCAATGTACATGT+TGG - chr7_4:49608126-49608145 None:intergenic 30.0%
ATATGCACAAACAACACTAT+GGG - chr7_4:49608167-49608186 None:intergenic 30.0%
!!! GTTTTGTTGTTTGTATGCAT+AGG + chr7_4:49608193-49608212 Msa1159880:intron 30.0%
ATCCAATGACAGATACTTTA+TGG - chr7_4:49608270-49608289 None:intergenic 30.0%
TTCCTTCATTGAGAATGTAT+TGG + chr7_4:49608737-49608756 Msa1159880:intron 30.0%
ATCCAATACATTCTCAATGA+AGG - chr7_4:49608742-49608761 None:intergenic 30.0%
! ATACACTATTGGTTACATGT+GGG + chr7_4:49609194-49609213 Msa1159880:intron 30.0%
! TCATTTTCTTTCATGCTTAG+TGG + chr7_4:49609793-49609812 Msa1159880:intron 30.0%
GATGTGTTTACACTTTCTAT+TGG + chr7_4:49609849-49609868 Msa1159880:intron 30.0%
ATGTGAAGAGTAGTCATTAA+TGG - chr7_4:49609884-49609903 None:intergenic 30.0%
!!! AGACTTTTTTGACAAGTACA+AGG + chr7_4:49610280-49610299 Msa1159880:CDS 30.0%
!! TGATGATTTTAGAAGCAACA+GGG - chr7_4:49610322-49610341 None:intergenic 30.0%
TAATTGAATTCCTCAGTAAG+TGG + chr7_4:49610420-49610439 Msa1159880:CDS 30.0%
AAAACATAATCCACTTACTG+AGG - chr7_4:49610433-49610452 None:intergenic 30.0%
!!! AGTGGATTATGTTTTTGTCT+AGG + chr7_4:49610438-49610457 Msa1159880:CDS 30.0%
!! GATTATGTTTTTGTCTAGGA+GGG + chr7_4:49610442-49610461 Msa1159880:CDS 30.0%
TTAAAGCCGCATAAATTATG+TGG - chr7_4:49610587-49610606 None:intergenic 30.0%
!!! ATGATGAGCTTTTCAAGTAA+TGG - chr7_4:49610682-49610701 None:intergenic 30.0%
! CTCATCATTCAATTTTGTGA+AGG + chr7_4:49610694-49610713 Msa1159880:CDS 30.0%
!!! ACGATTAAGGATGTTGTTTT+TGG - chr7_4:49610876-49610895 None:intergenic 30.0%
ATTTACATTTCAGAGTTACG+AGG + chr7_4:49610901-49610920 Msa1159880:intron 30.0%
CTAAATGATCCAACATTTGT+AGG - chr7_4:49610937-49610956 None:intergenic 30.0%
ACAAATGTTGGATCATTTAG+AGG + chr7_4:49610937-49610956 Msa1159880:intron 30.0%
TCACAATCTGTAGATTCTTA+AGG - chr7_4:49610985-49611004 None:intergenic 30.0%
TGAATATCCATGTTAGAACT+AGG + chr7_4:49611002-49611021 Msa1159880:intron 30.0%
!! TTCACAGAACTTGTTATTGA+TGG + chr7_4:49611151-49611170 Msa1159880:intron 30.0%
! AAAATAGAGTTTTCGCAGAT+GGG - chr7_4:49611275-49611294 None:intergenic 30.0%
! AAAAATAGAGTTTTCGCAGA+TGG - chr7_4:49611276-49611295 None:intergenic 30.0%
AATAAAAGACCATCGAAAGA+AGG - chr7_4:49611607-49611626 None:intergenic 30.0%
! CTAGCAAACACTCATTTTAT+TGG + chr7_4:49611767-49611786 Msa1159880:intron 30.0%
TCGGTCACAAATAAATTTGA+GGG - chr7_4:49611811-49611830 None:intergenic 30.0%
!!! GGGTTTTGGTTAAATTACTA+AGG + chr7_4:49611982-49612001 Msa1159880:intron 30.0%
TTGTGTGTGTGAGTTTATAA+TGG + chr7_4:49612344-49612363 Msa1159880:intron 30.0%
AAAAATGTTAAGTAGCCTAG+TGG + chr7_4:49612612-49612631 Msa1159880:intron 30.0%
ATAAGACATATGTAGAGTCA+GGG - chr7_4:49612689-49612708 None:intergenic 30.0%
ACTAAACTAAACTCACATGA+CGG + chr7_4:49612711-49612730 Msa1159880:intron 30.0%
! TGTTTTCTCTAAATGGAGAA+TGG - chr7_4:49612853-49612872 None:intergenic 30.0%
GGTTGCAAAATTTAACTCTT+AGG - chr7_4:49612893-49612912 None:intergenic 30.0%
! GTTAAATTTTGCAACCATAG+TGG + chr7_4:49612897-49612916 Msa1159880:intron 30.0%
!! GATTCCAAAAGTTTTAGCAA+AGG - chr7_4:49612964-49612983 None:intergenic 30.0%
!!! CAGTGTGAATTTTAGTTGAA+AGG - chr7_4:49613178-49613197 None:intergenic 30.0%
TATGTTCTCAGCAAACTATA+AGG - chr7_4:49613203-49613222 None:intergenic 30.0%
! AAACTATGTTTGAGTTAGCT+CGG - chr7_4:49613273-49613292 None:intergenic 30.0%
AAATAATGTAACCCTGAATG+TGG + chr7_4:49613481-49613500 Msa1159880:intron 30.0%
AATTAAATGATTCGAGCAAG+CGG + chr7_4:49613776-49613795 Msa1159880:intron 30.0%
!!! CTTTTTTTTTAGCTCGAGTT+CGG - chr7_4:49613849-49613868 None:intergenic 30.0%
GACACATTTGTTTGAATAGT+TGG - chr7_4:49613973-49613992 None:intergenic 30.0%
ATATTCCAATAGCTACACAA+TGG + chr7_4:49614106-49614125 Msa1159880:intron 30.0%
TTGATTCCACTAAAAAGTAG+TGG - chr7_4:49614198-49614217 None:intergenic 30.0%
CATGTGAAAAAGTTGGAATA+TGG + chr7_4:49614248-49614267 Msa1159880:intron 30.0%
TTAACATGCGTATGGTATTT+CGG + chr7_4:49614403-49614422 Msa1159880:intron 30.0%
GTATTTCGGACATTTACTTT+GGG + chr7_4:49614417-49614436 Msa1159880:intron 30.0%
GTATTTGTGGAATTTCAGTT+GGG - chr7_4:49614597-49614616 None:intergenic 30.0%
AGTATTTGTGGAATTTCAGT+TGG - chr7_4:49614598-49614617 None:intergenic 30.0%
TGGTTATATTGAAGCAATGA+TGG - chr7_4:49614803-49614822 None:intergenic 30.0%
!!! AGCTTCTGCCATTTTTTTTT+TGG - chr7_4:49615175-49615194 None:intergenic 30.0%
ATAATGAGCAAATGAAAGAG+TGG - chr7_4:49615256-49615275 None:intergenic 30.0%
! GGATGATAATGATAAATCGA+TGG - chr7_4:49615487-49615506 None:intergenic 30.0%
! AGTAATTTTTCATGTAGACG+TGG + chr7_4:49615558-49615577 Msa1159880:intron 30.0%
!! TGTGTTTTTACATCACGATA+TGG - chr7_4:49615822-49615841 None:intergenic 30.0%
! TTTTCGGATCTGTGTTAATT+TGG + chr7_4:49616097-49616116 Msa1159880:intron 30.0%
TCAGTTCAATTTGACAAGTT+AGG - chr7_4:49616197-49616216 None:intergenic 30.0%
! TATGTTGCATCAAACTTGTT+AGG + chr7_4:49616401-49616420 Msa1159880:intron 30.0%
!! ATGTTGCATCAAACTTGTTA+GGG + chr7_4:49616402-49616421 Msa1159880:intron 30.0%
TTCCTAACATTGTGAATGTA+TGG + chr7_4:49616457-49616476 Msa1159880:intron 30.0%
TTCCATACATTCACAATGTT+AGG - chr7_4:49616462-49616481 None:intergenic 30.0%
AATGTATGGAACACTGTATA+TGG + chr7_4:49616471-49616490 Msa1159880:intron 30.0%
!! GACAATCATTTTTCTTAGCT+CGG + chr7_4:49616834-49616853 Msa1159880:intron 30.0%
TTATCTATGTATAGAGAAGG+TGG - chr7_4:49616862-49616881 None:intergenic 30.0%
ACCTTCTCTATACATAGATA+AGG + chr7_4:49616861-49616880 Msa1159880:intron 30.0%
TCCTTATCTATGTATAGAGA+AGG - chr7_4:49616865-49616884 None:intergenic 30.0%
! AGCCAAATTTGAAATTGAGA+AGG - chr7_4:49616974-49616993 None:intergenic 30.0%
CTAACATGCAATAATGCAAA+AGG - chr7_4:49617070-49617089 None:intergenic 30.0%
ACTTTCATCACTATTCTACA+TGG - chr7_4:49617177-49617196 None:intergenic 30.0%
TAGAATTCGTATGGATCATT+AGG - chr7_4:49617417-49617436 None:intergenic 30.0%
TTGTTATCGTTTAAGGGATT+TGG - chr7_4:49617534-49617553 None:intergenic 30.0%
! TCGACTTTGTTATCGTTTAA+GGG - chr7_4:49617540-49617559 None:intergenic 30.0%
! ATCGACTTTGTTATCGTTTA+AGG - chr7_4:49617541-49617560 None:intergenic 30.0%
TAAACGATAACAAAGTCGAT+CGG + chr7_4:49617541-49617560 Msa1159880:intron 30.0%
CTAGAGTAGCAATATATCTT+AGG - chr7_4:49617669-49617688 None:intergenic 30.0%
! CCTTTTGATCTTGCAATATA+TGG - chr7_4:49617786-49617805 None:intergenic 30.0%
CCATATATTGCAAGATCAAA+AGG + chr7_4:49617783-49617802 Msa1159880:intron 30.0%
GTAGCTAAATACTCTTTGTT+GGG - chr7_4:49617842-49617861 None:intergenic 30.0%
TGTAGCTAAATACTCTTTGT+TGG - chr7_4:49617843-49617862 None:intergenic 30.0%
TATTTAGCTACACATCATCA+TGG + chr7_4:49617851-49617870 Msa1159880:intron 30.0%
! ATATAGAGTGAGAGTGATTT+TGG - chr7_4:49617954-49617973 None:intergenic 30.0%
TCTTGGCATTTATCAAATAG+TGG + chr7_4:49618457-49618476 Msa1159880:intron 30.0%
!!! ATCATGTTCGTTTGTTTTTG+AGG + chr7_4:49618595-49618614 Msa1159880:intron 30.0%
TCTTGAGTTATTACATTGCT+TGG + chr7_4:49618852-49618871 Msa1159880:intron 30.0%
CTTGAGTTATTACATTGCTT+GGG + chr7_4:49618853-49618872 Msa1159880:intron 30.0%
TTGTAGTTTCGACAATATCA+AGG + chr7_4:49619009-49619028 Msa1159880:intron 30.0%
! TTATTGCCTGATGTGTTTTA+AGG + chr7_4:49619311-49619330 Msa1159880:intron 30.0%
AAGTTACCTTAAAACACATC+AGG - chr7_4:49619320-49619339 None:intergenic 30.0%
TCTAAAAACTCTAACCACAT+TGG - chr7_4:49619376-49619395 None:intergenic 30.0%
!! GTGGTTAGAGTTTTTAGATA+AGG + chr7_4:49619378-49619397 Msa1159880:intron 30.0%
!! GGTTAGAGTTTTTAGATAAG+GGG + chr7_4:49619380-49619399 Msa1159880:intron 30.0%
!! TATTTGTTCAGGATTGGTTA+TGG + chr7_4:49619662-49619681 Msa1159880:intron 30.0%
AAGTCATAGTTATGTTGCTA+CGG + chr7_4:49619801-49619820 Msa1159880:intron 30.0%
!!! TTTTGAATGCTTTTTTGCTG+CGG + chr7_4:49619832-49619851 Msa1159880:intron 30.0%
! TTACTTGCTACGGATTTAAT+AGG + chr7_4:49619885-49619904 Msa1159880:intron 30.0%
! TACTTGCTACGGATTTAATA+GGG + chr7_4:49619886-49619905 Msa1159880:intron 30.0%
!! ATTGAGAGACAAATTTGCTA+GGG - chr7_4:49619919-49619938 None:intergenic 30.0%
CTACGGAATAACTATTGAAT+CGG - chr7_4:49619953-49619972 None:intergenic 30.0%
ATTTAGCTAGAGATAAGCTA+CGG - chr7_4:49619970-49619989 None:intergenic 30.0%
TAGCTTATCTCTAGCTAAAT+GGG + chr7_4:49619970-49619989 Msa1159880:intron 30.0%
!! TGACTCTTCTAAAATTTCCT+TGG + chr7_4:49620074-49620093 Msa1159880:intron 30.0%
! TGAGACTATTTTCAACAAGA+GGG + chr7_4:49620271-49620290 Msa1159880:CDS 30.0%
!! GGACTAGTATTTTGTCTAAA+CGG + chr7_4:49620387-49620406 Msa1159880:intron 30.0%
TTTGATGAATATGAGGATCT+CGG + chr7_4:49620468-49620487 Msa1159880:intron 30.0%
ATCTTGAATTTGTAGTCATG+AGG - chr7_4:49620573-49620592 None:intergenic 30.0%
! TTTGATTGAGATGTGTTTTG+TGG - chr7_4:49620668-49620687 None:intergenic 30.0%
TTACAAGAGAGGACAATATA+TGG - chr7_4:49620693-49620712 None:intergenic 30.0%
ATATATTGTCCTCTCTTGTA+AGG + chr7_4:49620692-49620711 Msa1159880:CDS 30.0%
TCTTGTTAGACAGAGTCATA+AGG - chr7_4:49607069-49607088 None:intergenic 35.0%
TATGACTCTGTCTAACAAGA+AGG + chr7_4:49607069-49607088 Msa1159880:exon 35.0%
TCGATCAATATGATCATGAC+TGG - chr7_4:49607095-49607114 None:intergenic 35.0%
TGTACATCAAAGACCTAGTT+AGG + chr7_4:49607161-49607180 Msa1159880:CDS 35.0%
! CAAAAAAGTGGAGGTATATG+TGG + chr7_4:49607197-49607216 Msa1159880:CDS 35.0%
CAATGGAATACATTGATACG+TGG + chr7_4:49607389-49607408 Msa1159880:CDS 35.0%
TTTGATCGAGATGTTTGTTC+TGG - chr7_4:49607459-49607478 None:intergenic 35.0%
TGGAATTGACAGGTTAAATC+CGG - chr7_4:49607530-49607549 None:intergenic 35.0%
CTTATTGTCTGTTACATTCG+AGG + chr7_4:49607588-49607607 Msa1159880:CDS 35.0%
AATAAGACTCTCAAGTACAC+CGG - chr7_4:49607614-49607633 None:intergenic 35.0%
!! GTACTTGAGAGTCTTATTTC+TGG + chr7_4:49607616-49607635 Msa1159880:intron 35.0%
GTTTGCCAAAAAACATTGAG+AGG + chr7_4:49607818-49607837 Msa1159880:CDS 35.0%
!!! GTGATGTTGTTTTCTAACCT+TGG - chr7_4:49607869-49607888 None:intergenic 35.0%
GATATGCACAAACAACACTA+TGG - chr7_4:49608168-49608187 None:intergenic 35.0%
!!! AATGAAGTTTTTAGCAGCGT+GGG - chr7_4:49608242-49608261 None:intergenic 35.0%
! CTCCATAAAGTATCTGTCAT+TGG + chr7_4:49608265-49608284 Msa1159880:intron 35.0%
TCACTATCTTAAGTCGATCA+AGG - chr7_4:49608526-49608545 None:intergenic 35.0%
GAGACTCTTACTTATACTGT+TGG + chr7_4:49608620-49608639 Msa1159880:intron 35.0%
! CTTACTTATACTGTTGGTCT+TGG + chr7_4:49608626-49608645 Msa1159880:intron 35.0%
! GCATTTCTGAAGAGTTGTTA+TGG + chr7_4:49608681-49608700 Msa1159880:intron 35.0%
!! GATAAACTTGCTGCTCAATT+GGG - chr7_4:49608850-49608869 None:intergenic 35.0%
!! TGATAAACTTGCTGCTCAAT+TGG - chr7_4:49608851-49608870 None:intergenic 35.0%
TTAGGAGATCGATACACTAT+TGG + chr7_4:49609183-49609202 Msa1159880:intron 35.0%
! GATACACTATTGGTTACATG+TGG + chr7_4:49609193-49609212 Msa1159880:intron 35.0%
ACATTGCAAACACATCATGA+CGG - chr7_4:49609733-49609752 None:intergenic 35.0%
AAGTGTTAGAGGAAAGATTC+GGG - chr7_4:49610015-49610034 None:intergenic 35.0%
CAAGTGTTAGAGGAAAGATT+CGG - chr7_4:49610016-49610035 None:intergenic 35.0%
ATCTTTCCTCTAACACTTGT+TGG + chr7_4:49610017-49610036 Msa1159880:intron 35.0%
TCTTTCCTCTAACACTTGTT+GGG + chr7_4:49610018-49610037 Msa1159880:intron 35.0%
ATTAACATGGTATCAGAGTC+TGG - chr7_4:49610061-49610080 None:intergenic 35.0%
GTAAGAGTGGATATTGAAGT+TGG + chr7_4:49610121-49610140 Msa1159880:intron 35.0%
!! TTGAAGTTGGTGGAAATCTT+TGG + chr7_4:49610134-49610153 Msa1159880:intron 35.0%
!! AAGTGTTGGAGGAAAGATTA+AGG - chr7_4:49610178-49610197 None:intergenic 35.0%
TGTTAGAAGCTACACTTGTT+AGG - chr7_4:49610215-49610234 None:intergenic 35.0%
!! GTGATGATTTTAGAAGCAAC+AGG - chr7_4:49610323-49610342 None:intergenic 35.0%
!! GGATTATGTTTTTGTCTAGG+AGG + chr7_4:49610441-49610460 Msa1159880:CDS 35.0%
AGGAGGGATATTAAACATCT+CGG + chr7_4:49610458-49610477 Msa1159880:CDS 35.0%
CAAGCAAGGACAGTAAATTA+TGG - chr7_4:49610518-49610537 None:intergenic 35.0%
ATTTACTGTCCTTGCTTGTA+AGG + chr7_4:49610520-49610539 Msa1159880:intron 35.0%
TAGTCAATTCCTTACAAGCA+AGG - chr7_4:49610532-49610551 None:intergenic 35.0%
TCTAATGTTACATTCGAGTC+CGG + chr7_4:49610629-49610648 Msa1159880:CDS 35.0%
! AGCAATAAGACTTTGAGAGT+AGG - chr7_4:49610745-49610764 None:intergenic 35.0%
GCTTATATGAACACAGTATC+CGG + chr7_4:49610834-49610853 Msa1159880:intron 35.0%
TGTTGATACCCTACAAATGT+TGG + chr7_4:49610925-49610944 Msa1159880:intron 35.0%
AGCTTGCAATGAGTTTGATA+CGG + chr7_4:49611029-49611048 Msa1159880:intron 35.0%
CTGTGAAATTCTTAACAGCA+TGG - chr7_4:49611138-49611157 None:intergenic 35.0%
GCACAAGTTAAGTTCCTTTA+TGG + chr7_4:49611191-49611210 Msa1159880:intron 35.0%
! TTTAACAAGAACTAGTCTCC+TGG + chr7_4:49611242-49611261 Msa1159880:intron 35.0%
! AAATAGAGTTTTCGCAGATG+GGG - chr7_4:49611274-49611293 None:intergenic 35.0%
!! TAAAAACAGGTTGGTGCTTA+TGG + chr7_4:49611447-49611466 Msa1159880:intron 35.0%
! CATTTTCCCGTTAAATTCGA+GGG + chr7_4:49611531-49611550 Msa1159880:intron 35.0%
! ATTTTCCCGTTAAATTCGAG+GGG + chr7_4:49611532-49611551 Msa1159880:intron 35.0%
TCGAAAGAAGGTTAACTACA+TGG - chr7_4:49611595-49611614 None:intergenic 35.0%
TGTAGTTAACCTTCTTTCGA+TGG + chr7_4:49611595-49611614 Msa1159880:intron 35.0%
CGGTCACAAATAAATTTGAG+GGG - chr7_4:49611810-49611829 None:intergenic 35.0%
GTCGGTCACAAATAAATTTG+AGG - chr7_4:49611812-49611831 None:intergenic 35.0%
TATTTGTGACCGACATGATT+TGG + chr7_4:49611818-49611837 Msa1159880:intron 35.0%
GTGACTCAAATTATTGCATG+TGG + chr7_4:49612160-49612179 Msa1159880:intron 35.0%
TCAAATTATTGCATGTGGCT+CGG + chr7_4:49612165-49612184 Msa1159880:intron 35.0%
TGACAAATGCCGAAATTGTT+AGG + chr7_4:49612281-49612300 Msa1159880:intron 35.0%
TATAAACTCACACACACAAG+TGG - chr7_4:49612343-49612362 None:intergenic 35.0%
!! TTTTTGGTAGATGGACGAAA+TGG - chr7_4:49612375-49612394 None:intergenic 35.0%
AAGGTGAATAAGTAGGTGTT+CGG + chr7_4:49612655-49612674 Msa1159880:intron 35.0%
GATAAGACATATGTAGAGTC+AGG - chr7_4:49612690-49612709 None:intergenic 35.0%
! CGTGTTGTGTTTTCTCTAAA+TGG - chr7_4:49612860-49612879 None:intergenic 35.0%
! ACCTCCTTTGCTAAAACTTT+TGG + chr7_4:49612957-49612976 Msa1159880:intron 35.0%
!! TCCAAAAGTTTTAGCAAAGG+AGG - chr7_4:49612961-49612980 None:intergenic 35.0%
!!! TAACATGCGTAGAGGTATTT+TGG - chr7_4:49613030-49613049 None:intergenic 35.0%
TTAACTCACGCTAGTGTAAA+TGG + chr7_4:49613047-49613066 Msa1159880:intron 35.0%
ATATGGCATATGTGTAGTGT+TGG - chr7_4:49613235-49613254 None:intergenic 35.0%
ACACTACACATATGCCATAT+AGG + chr7_4:49613235-49613254 Msa1159880:intron 35.0%
CACTACACATATGCCATATA+GGG + chr7_4:49613236-49613255 Msa1159880:intron 35.0%
GAGCTAACTCAAACATAGTT+TGG + chr7_4:49613272-49613291 Msa1159880:intron 35.0%
! TATGTATAGTTCGACTCGTT+TGG + chr7_4:49613397-49613416 Msa1159880:intron 35.0%
AATACTGGCACTTAATGCAT+AGG - chr7_4:49613548-49613567 None:intergenic 35.0%
CATTAAGTGCCAGTATTCTT+TGG + chr7_4:49613551-49613570 Msa1159880:intron 35.0%
ATTAAATGATTCGAGCAAGC+GGG + chr7_4:49613777-49613796 Msa1159880:intron 35.0%
CTAGGAATATGTGTAGATGT+TGG - chr7_4:49614019-49614038 None:intergenic 35.0%
CAACTATTCAAACATGTGTG+TGG - chr7_4:49614042-49614061 None:intergenic 35.0%
TAGCTATTGGAATATGTGTG+TGG - chr7_4:49614101-49614120 None:intergenic 35.0%
TTCATCCATTGTGTAGCTAT+TGG - chr7_4:49614114-49614133 None:intergenic 35.0%
TTCCACTAAAAAGTAGTGGT+GGG - chr7_4:49614194-49614213 None:intergenic 35.0%
ATTCCACTAAAAAGTAGTGG+TGG - chr7_4:49614195-49614214 None:intergenic 35.0%
!!! CAACTTTTTCACATGTTGTG+TGG - chr7_4:49614243-49614262 None:intergenic 35.0%
CACACAACATGTGAAAAAGT+TGG + chr7_4:49614241-49614260 Msa1159880:intron 35.0%
GGTATTTCGGACATTTACTT+TGG + chr7_4:49614416-49614435 Msa1159880:intron 35.0%
!! AACTTATGCAGGAGTATTTG+TGG - chr7_4:49614610-49614629 None:intergenic 35.0%
AGTAAAACATGACAGAATGC+AGG - chr7_4:49614743-49614762 None:intergenic 35.0%
ATTTGTATCACGTGAGTTCT+TGG - chr7_4:49614927-49614946 None:intergenic 35.0%
CAGTAATTAGTTGTGGAGAT+TGG - chr7_4:49614970-49614989 None:intergenic 35.0%
! TGAGAGCGAACAATTTTTGT+TGG + chr7_4:49615074-49615093 Msa1159880:intron 35.0%
! GAGAGCGAACAATTTTTGTT+GGG + chr7_4:49615075-49615094 Msa1159880:intron 35.0%
AACACAGATCATAAACTCGT+CGG - chr7_4:49616027-49616046 None:intergenic 35.0%
ATGAAGTAGACATCTCTTTG+AGG + chr7_4:49616504-49616523 Msa1159880:intron 35.0%
GGTGGTTATAATCATATCCT+AGG - chr7_4:49616537-49616556 None:intergenic 35.0%
AGAAACTTGTGAAGAAAAGG+TGG - chr7_4:49616555-49616574 None:intergenic 35.0%
ATTACCAACCACTAAGTTCA+CGG + chr7_4:49616637-49616656 Msa1159880:intron 35.0%
AAGATGATTCAGAAAGAGCA+AGG - chr7_4:49616693-49616712 None:intergenic 35.0%
TGTTCAGTTGTGTGTGTATT+TGG - chr7_4:49616782-49616801 None:intergenic 35.0%
TACCTCATAACCTAACCATT+TGG - chr7_4:49616937-49616956 None:intergenic 35.0%
GAAATTGAGAAGGATTTGGA+AGG - chr7_4:49616964-49616983 None:intergenic 35.0%
ATGCTTTCGGATACTTAATC+AGG - chr7_4:49617590-49617609 None:intergenic 35.0%
CAATGAGATTCAAGATGCTT+TGG - chr7_4:49617714-49617733 None:intergenic 35.0%
TATCTTCAAGGAATAGCAAG+TGG + chr7_4:49618114-49618133 Msa1159880:intron 35.0%
! ATTACTCTATCCTTTTGTGC+AGG - chr7_4:49618328-49618347 None:intergenic 35.0%
CTTGCTTTGCAAGTAATTAG+AGG - chr7_4:49618398-49618417 None:intergenic 35.0%
CATTTATCAAATAGTGGCTC+TGG + chr7_4:49618463-49618482 Msa1159880:intron 35.0%
AACTGTCTTTAGTGTTAGAG+TGG + chr7_4:49618629-49618648 Msa1159880:intron 35.0%
TAGTTTCGACAATATCAAGG+CGG + chr7_4:49619012-49619031 Msa1159880:intron 35.0%
! TTGAGGCCTAAATTTTCACT+CGG - chr7_4:49619067-49619086 None:intergenic 35.0%
GCTTGAAACAACTTCAATGA+TGG + chr7_4:49619259-49619278 Msa1159880:intron 35.0%
! AAACTCTAACCACATTGGTT+AGG - chr7_4:49619371-49619390 None:intergenic 35.0%
AGTCTCAAGATATTCTTCGT+TGG - chr7_4:49619412-49619431 None:intergenic 35.0%
CGAAGAATATCTTGAGACTA+AGG + chr7_4:49619413-49619432 Msa1159880:intron 35.0%
TATCTTGAGACTAAGGTCAA+TGG + chr7_4:49619420-49619439 Msa1159880:intron 35.0%
ATCTTGAGACTAAGGTCAAT+GGG + chr7_4:49619421-49619440 Msa1159880:intron 35.0%
TTGATGCTATGGTCAAATTC+TGG + chr7_4:49619445-49619464 Msa1159880:intron 35.0%
! GATTGAGAGACAAATTTGCT+AGG - chr7_4:49619920-49619939 None:intergenic 35.0%
GTAGCTTATCTCTAGCTAAA+TGG + chr7_4:49619969-49619988 Msa1159880:intron 35.0%
CTGCAGTGTATCTACAAAAT+TGG + chr7_4:49620008-49620027 Msa1159880:intron 35.0%
ATCTACAGATTTAAGAGCCA+AGG - chr7_4:49620094-49620113 None:intergenic 35.0%
TAGAAGTTCGAAGATCAAAG+TGG - chr7_4:49620126-49620145 None:intergenic 35.0%
! CTGAGACTATTTTCAACAAG+AGG + chr7_4:49620270-49620289 Msa1159880:CDS 35.0%
GTCAAGATGATGATACTGAT+CGG + chr7_4:49620297-49620316 Msa1159880:CDS 35.0%
ACACTTGAAAATCAAAGACC+TGG + chr7_4:49620361-49620380 Msa1159880:CDS 35.0%
TGAAAATCAAAGACCTGGTT+AGG + chr7_4:49620366-49620385 Msa1159880:intron 35.0%
ACAAAATACTAGTCCTAACC+AGG - chr7_4:49620382-49620401 None:intergenic 35.0%
! CTAGTATTTTGTCTAAACGG+TGG + chr7_4:49620390-49620409 Msa1159880:intron 35.0%
ATGTTCTAGTGCAACACAAA+GGG + chr7_4:49620520-49620539 Msa1159880:CDS 35.0%
GATTTCGTGTTTGTCAAAGA+GGG + chr7_4:49620617-49620636 Msa1159880:CDS 35.0%
AAGTCAATTCCTTACAAGAG+AGG - chr7_4:49620704-49620723 None:intergenic 35.0%
! CTTTTAAACCCACAGAAATC+AGG - chr7_4:49620761-49620780 None:intergenic 35.0%
! TTGTTTGTTAGATTCAAGCC+TGG + chr7_4:49620800-49620819 Msa1159880:CDS 35.0%
GATGTTCTTATGCAACACAG+CGG + chr7_4:49607313-49607332 Msa1159880:intron 40.0%
ATGTTCTTATGCAACACAGC+GGG + chr7_4:49607314-49607333 Msa1159880:intron 40.0%
AGAAATCAGGTGGAATTGAC+AGG - chr7_4:49607540-49607559 None:intergenic 40.0%
TCAATTCCACCTGATTTCTG+CGG + chr7_4:49607541-49607560 Msa1159880:CDS 40.0%
!!! CTTTTAAAGCCGCAGAAATC+AGG - chr7_4:49607553-49607572 None:intergenic 40.0%
! AGCCATAAGACTTTGAGAGT+GGG - chr7_4:49607709-49607728 None:intergenic 40.0%
! TAGCCATAAGACTTTGAGAG+TGG - chr7_4:49607710-49607729 None:intergenic 40.0%
GATCTTAGACTCACAGTATC+TGG + chr7_4:49607784-49607803 Msa1159880:CDS 40.0%
ATCACCACTTCTATCTAGCT+TGG + chr7_4:49608009-49608028 Msa1159880:intron 40.0%
GTTGTTTGTATGCATAGGTC+CGG + chr7_4:49608198-49608217 Msa1159880:intron 40.0%
GAGGAATGATATCTGCATAC+CGG - chr7_4:49608220-49608239 None:intergenic 40.0%
!!! GAATGAAGTTTTTAGCAGCG+TGG - chr7_4:49608243-49608262 None:intergenic 40.0%
GCTGTGAATTTGAGTGAAAG+AGG + chr7_4:49608290-49608309 Msa1159880:intron 40.0%
TCTTAAGTCGATCAAGGCAA+TGG - chr7_4:49608520-49608539 None:intergenic 40.0%
AGCATGCAATGAGTCTGATA+CGG + chr7_4:49608570-49608589 Msa1159880:intron 40.0%
AGTAAGAGTCTCTAACGATG+TGG - chr7_4:49608612-49608631 None:intergenic 40.0%
TTCAACACCACAGTTCTTCT+TGG + chr7_4:49608769-49608788 Msa1159880:intron 40.0%
AAAGACACCAAGAAGAACTG+TGG - chr7_4:49608779-49608798 None:intergenic 40.0%
!! ACAGTTCTTCTTGGTGTCTT+TGG + chr7_4:49608778-49608797 Msa1159880:intron 40.0%
AAAAAGCCACTGAGAGGTTT+CGG + chr7_4:49609288-49609307 Msa1159880:intron 40.0%
!! TAAATTTGCTAGGTGAGCAG+TGG - chr7_4:49609439-49609458 None:intergenic 40.0%
AGACAATCTCACTGCTAAGA+AGG - chr7_4:49609764-49609783 None:intergenic 40.0%
! AGCCTGTTGGTTGAAATCTT+TGG + chr7_4:49609972-49609991 Msa1159880:intron 40.0%
GACCAAAGATTTCAACCAAC+AGG - chr7_4:49609977-49609996 None:intergenic 40.0%
!! GAGTCTGGTTCTAATGGTTT+GGG - chr7_4:49610046-49610065 None:intergenic 40.0%
!! AGAGTCTGGTTCTAATGGTT+TGG - chr7_4:49610047-49610066 None:intergenic 40.0%
!! GTATCAGAGTCTGGTTCTAA+TGG - chr7_4:49610052-49610071 None:intergenic 40.0%
AGAGTGGATATTGAAGTTGG+TGG + chr7_4:49610124-49610143 Msa1159880:intron 40.0%
TCTTTCCTCCAACACTTGTT+AGG + chr7_4:49610181-49610200 Msa1159880:intron 40.0%
AGTGTAGCTTCTAACACTTG+AGG + chr7_4:49610219-49610238 Msa1159880:intron 40.0%
TCTAACACTTGAGGTATACG+TGG + chr7_4:49610228-49610247 Msa1159880:intron 40.0%
GGAGGGATATTAAACATCTC+GGG + chr7_4:49610459-49610478 Msa1159880:CDS 40.0%
! CATCTCGGGTTTTTGAACTA+TGG + chr7_4:49610473-49610492 Msa1159880:intron 40.0%
AAATAAGACCCTAAGTGCAC+CGG - chr7_4:49610651-49610670 None:intergenic 40.0%
!! TGCACTTAGGGTCTTATTTC+TGG + chr7_4:49610652-49610671 Msa1159880:CDS 40.0%
!! GGGAAAATGCCGATTTAACT+GGG - chr7_4:49611520-49611539 None:intergenic 40.0%
! GCATTTTCCCGTTAAATTCG+AGG + chr7_4:49611530-49611549 Msa1159880:intron 40.0%
! TTTTCCCGTTAAATTCGAGG+GGG + chr7_4:49611533-49611552 Msa1159880:intron 40.0%
ATTTGAGTCACACGCAACAA+CGG - chr7_4:49612151-49612170 None:intergenic 40.0%
AAATGCCGAAATTGTTAGGC+CGG + chr7_4:49612285-49612304 Msa1159880:intron 40.0%
AAATCTGAAGAGTGAAAGCC+AGG - chr7_4:49612806-49612825 None:intergenic 40.0%
! TGGAGAATGGTTAGTCGAAA+TGG - chr7_4:49612840-49612859 None:intergenic 40.0%
CATCTACTATGTTGCCACTA+TGG - chr7_4:49612914-49612933 None:intergenic 40.0%
AGTGGCAACATAGTAGATGA+AGG + chr7_4:49612915-49612934 Msa1159880:intron 40.0%
GTGGCAACATAGTAGATGAA+GGG + chr7_4:49612916-49612935 Msa1159880:intron 40.0%
TGGCAACATAGTAGATGAAG+GGG + chr7_4:49612917-49612936 Msa1159880:intron 40.0%
GAATCCTGCTCTTTACCAAA+CGG + chr7_4:49612979-49612998 Msa1159880:intron 40.0%
AAAACCGTTTGGTAAAGAGC+AGG - chr7_4:49612986-49613005 None:intergenic 40.0%
TGAGAATGAGCAAAACCGTT+TGG - chr7_4:49612997-49613016 None:intergenic 40.0%
!! ATATGTGTAGTGTTGGCACA+TGG - chr7_4:49613228-49613247 None:intergenic 40.0%
! GCTCATTTGGTTCATAAACC+AGG - chr7_4:49613326-49613345 None:intergenic 40.0%
TGAACCAAATGAGCTGAACT+TGG + chr7_4:49613332-49613351 Msa1159880:intron 40.0%
GAACCAAATGAGCTGAACTT+GGG + chr7_4:49613333-49613352 Msa1159880:intron 40.0%
! GTTTGGTTCATGAGTTAGCT+CGG + chr7_4:49613414-49613433 Msa1159880:intron 40.0%
TGATACATCGTCCACATTCA+GGG - chr7_4:49613495-49613514 None:intergenic 40.0%
ATGATACATCGTCCACATTC+AGG - chr7_4:49613496-49613515 None:intergenic 40.0%
!! CGACTCGATAAGTATTGGTT+CGG - chr7_4:49613899-49613918 None:intergenic 40.0%
ATTTCCAGTCCTAATGCCAT+AGG + chr7_4:49613938-49613957 Msa1159880:intron 40.0%
! TTTTCCTATGGCATTAGGAC+TGG - chr7_4:49613945-49613964 None:intergenic 40.0%
GTCCTAATGCCATAGGAAAA+CGG + chr7_4:49613945-49613964 Msa1159880:intron 40.0%
ATTCAAACATGTGTGTGGCT+AGG - chr7_4:49614037-49614056 None:intergenic 40.0%
GGCTATGAATATGTGTAGCT+AGG - chr7_4:49614080-49614099 None:intergenic 40.0%
CAACTATTCAAACGTGTGTG+TGG - chr7_4:49614163-49614182 None:intergenic 40.0%
!!! ATCCCACCACTACTTTTTAG+TGG + chr7_4:49614189-49614208 Msa1159880:intron 40.0%
! TTTTCACATGTTGTGTGGCT+AGG - chr7_4:49614238-49614257 None:intergenic 40.0%
TGGGAATGAGCAAAATCGTT+TGG + chr7_4:49614436-49614455 Msa1159880:intron 40.0%
GGGAATGAGCAAAATCGTTT+GGG + chr7_4:49614437-49614456 Msa1159880:intron 40.0%
AAATCGTTTGGGTAAAGAGC+AGG + chr7_4:49614448-49614467 Msa1159880:intron 40.0%
!! TCATTCTGATATGGCCTTGT+TGG + chr7_4:49614486-49614505 Msa1159880:intron 40.0%
!! CATTCTGATATGGCCTTGTT+GGG + chr7_4:49614487-49614506 Msa1159880:intron 40.0%
CAATGTATCAAAGCCCAACA+AGG - chr7_4:49614503-49614522 None:intergenic 40.0%
GGGAATGAGCAAAATGTGTT+GGG - chr7_4:49614577-49614596 None:intergenic 40.0%
TGGGAATGAGCAAAATGTGT+TGG - chr7_4:49614578-49614597 None:intergenic 40.0%
TAGCGTGAGTTAACTTATGC+AGG - chr7_4:49614621-49614640 None:intergenic 40.0%
TAACTCACGCATGGGTAAAA+TGG + chr7_4:49615041-49615060 Msa1159880:intron 40.0%
TGTCGAAATGTTCTACCACT+AGG - chr7_4:49615127-49615146 None:intergenic 40.0%
ATGCTAGGATACTTGTGCTA+CGG + chr7_4:49615651-49615670 Msa1159880:intron 40.0%
CTTGTGCTACGGAATGTAAA+TGG + chr7_4:49615662-49615681 Msa1159880:intron 40.0%
TCTCCAATCTACCTCTGTTT+GGG + chr7_4:49615958-49615977 Msa1159880:intron 40.0%
!!! GGCAACAATTTTGAGGTTCT+CGG - chr7_4:49615993-49616012 None:intergenic 40.0%
ACAGATCAAACTGCGTGAAT+CGG - chr7_4:49616062-49616081 None:intergenic 40.0%
GACAAGTTTCTATGTTGCAG+AGG - chr7_4:49616331-49616350 None:intergenic 40.0%
!! AGACATCTCTTTGAGGTATC+AGG + chr7_4:49616511-49616530 Msa1159880:intron 40.0%
AAGGACATAATATGCAGGTG+AGG - chr7_4:49616674-49616693 None:intergenic 40.0%
AGAGCAAGGACATAATATGC+AGG - chr7_4:49616679-49616698 None:intergenic 40.0%
ACTAAGAGAGAGTGGTACAT+GGG - chr7_4:49616759-49616778 None:intergenic 40.0%
GTATTTGGACTAAGAGAGAG+TGG - chr7_4:49616767-49616786 None:intergenic 40.0%
GATGAGCTAGACTCTCTTTA+TGG + chr7_4:49616900-49616919 Msa1159880:intron 40.0%
! ATAACCTAACCATTTGGCTC+GGG - chr7_4:49616931-49616950 None:intergenic 40.0%
CATAACCTAACCATTTGGCT+CGG - chr7_4:49616932-49616951 None:intergenic 40.0%
AGCCAAATGGTTAGGTTATG+AGG + chr7_4:49616932-49616951 Msa1159880:intron 40.0%
TATTTGTGTATCGTCTCCAC+AGG + chr7_4:49617220-49617239 Msa1159880:intron 40.0%
ATTTGTGTATCGTCTCCACA+GGG + chr7_4:49617221-49617240 Msa1159880:intron 40.0%
! TTATATCGCTTTGGACACGA+AGG - chr7_4:49617479-49617498 None:intergenic 40.0%
ATACTTAATCAGGCTGGACA+CGG - chr7_4:49617580-49617599 None:intergenic 40.0%
TTTCGGATACTTAATCAGGC+TGG - chr7_4:49617586-49617605 None:intergenic 40.0%
ATACTCTTTGTTGGGATGAG+AGG - chr7_4:49617834-49617853 None:intergenic 40.0%
! CTTTTCAATCCATCCTTGCA+AGG - chr7_4:49617880-49617899 None:intergenic 40.0%
!! CTTGCAAGGATGGATTGAAA+AGG + chr7_4:49617878-49617897 Msa1159880:intron 40.0%
!! CAAGGATGGATTGAAAAGGA+AGG + chr7_4:49617882-49617901 Msa1159880:intron 40.0%
TCCTAGTGATGTCTCAACAA+AGG + chr7_4:49617913-49617932 Msa1159880:intron 40.0%
TCCTTTGTTGAGACATCACT+AGG - chr7_4:49617917-49617936 None:intergenic 40.0%
!! GTGAGAGTGATTTTGGAAGT+TGG - chr7_4:49617947-49617966 None:intergenic 40.0%
ATTACTCGCAATTGCGAGTA+AGG - chr7_4:49618163-49618182 None:intergenic 40.0%
TTACTCGCAATTGCGAGTAA+TGG + chr7_4:49618162-49618181 Msa1159880:intron 40.0%
TCCGTCTTTGATCAATGTCT+TGG + chr7_4:49618295-49618314 Msa1159880:intron 40.0%
CCCAAGACATTGATCAAAGA+CGG - chr7_4:49618299-49618318 None:intergenic 40.0%
CCGTCTTTGATCAATGTCTT+GGG + chr7_4:49618296-49618315 Msa1159880:intron 40.0%
TAGAGGCCGAGTGAAAATTT+AGG + chr7_4:49619058-49619077 Msa1159880:intron 40.0%
TTCTACAGGTTTGGACTGAA+TGG + chr7_4:49619172-49619191 Msa1159880:intron 40.0%
! CTTCAATGATGGTGCAAACA+AGG + chr7_4:49619270-49619289 Msa1159880:intron 40.0%
CTAATGACAATGTCTTCTCG+AGG + chr7_4:49619492-49619511 Msa1159880:intron 40.0%
CAGTAAAGTGAGAGAGACAA+AGG - chr7_4:49619572-49619591 None:intergenic 40.0%
!! GTTCAGGATTGGTTATGGAT+AGG + chr7_4:49619667-49619686 Msa1159880:intron 40.0%
TTGTCTCTCAATCCATGCTA+CGG + chr7_4:49619927-49619946 Msa1159880:intron 40.0%
CTTGTGCTTGTAGTTCTCTT+AGG + chr7_4:49620246-49620265 Msa1159880:intron 40.0%
TTACCATGCAATGTCACTGA+CGG + chr7_4:49620329-49620348 Msa1159880:CDS 40.0%
! GTATTTTGTCTAAACGGTGG+AGG + chr7_4:49620393-49620412 Msa1159880:intron 40.0%
ATTGGTCAAACCAAAGTCGT+GGG - chr7_4:49620442-49620461 None:intergenic 40.0%
TATTGGTCAAACCAAAGTCG+TGG - chr7_4:49620443-49620462 None:intergenic 40.0%
GATGTTCTAGTGCAACACAA+AGG + chr7_4:49620519-49620538 Msa1159880:CDS 40.0%
AAAGGGCCGATAGATAAGTT+TGG + chr7_4:49620537-49620556 Msa1159880:CDS 40.0%
CAATTGAACACCTCGATACA+TGG + chr7_4:49620595-49620614 Msa1159880:CDS 40.0%
AACACGAAATCCATGTATCG+AGG - chr7_4:49620608-49620627 None:intergenic 40.0%
GGATTTCGTGTTTGTCAAAG+AGG + chr7_4:49620616-49620635 Msa1159880:CDS 40.0%
TCAATTCCACCTGATTTCTG+TGG + chr7_4:49607541-49607560 Msa1159880:CDS 40.0%
CAATTCCACCTGATTTCTGT+GGG + chr7_4:49620750-49620769 Msa1159880:CDS 40.0%
TTAAACCCACAGAAATCAGG+TGG - chr7_4:49620758-49620777 None:intergenic 40.0%
ATAAGACTCTTGTGTGAACC+AGG - chr7_4:49620821-49620840 None:intergenic 40.0%
CTTTGATGTACAAGCGTGCT+AGG - chr7_4:49607153-49607172 None:intergenic 45.0%
CATCGTCAAACCGAAGTTGT+GGG - chr7_4:49607231-49607250 None:intergenic 45.0%
TCATCGTCAAACCGAAGTTG+TGG - chr7_4:49607232-49607251 None:intergenic 45.0%
! CTTTAGAAGTTACAGGGCCA+GGG - chr7_4:49607285-49607304 None:intergenic 45.0%
! ACTTTAGAAGTTACAGGGCC+AGG - chr7_4:49607286-49607305 None:intergenic 45.0%
TGTTCTTATGCAACACAGCG+GGG + chr7_4:49607315-49607334 Msa1159880:intron 45.0%
TTAAAGCCGCAGAAATCAGG+TGG - chr7_4:49607550-49607569 None:intergenic 45.0%
TTGTCTGTTACATTCGAGGC+CGG + chr7_4:49607592-49607611 Msa1159880:CDS 45.0%
CTCCCACTCTCAAAGTCTTA+TGG + chr7_4:49607704-49607723 Msa1159880:CDS 45.0%
CTGTCAGCCTTACAATACCA+AGG + chr7_4:49607849-49607868 Msa1159880:CDS 45.0%
GATGCCAAGCTAGATAGAAG+TGG - chr7_4:49608016-49608035 None:intergenic 45.0%
! TTCTATCTAGCTTGGCATCG+TGG + chr7_4:49608017-49608036 Msa1159880:intron 45.0%
!! ACTTAAAAGTGCTCCTCGCT+TGG + chr7_4:49608337-49608356 Msa1159880:intron 45.0%
TCCTCGCTTGGTTGATCTTA+AGG + chr7_4:49608349-49608368 Msa1159880:intron 45.0%
ACCTTAAGATCAACCAAGCG+AGG - chr7_4:49608353-49608372 None:intergenic 45.0%
TTCCAACTCCTCTGAATGCT+CGG - chr7_4:49608489-49608508 None:intergenic 45.0%
GTTACATGTGGGACTTCATC+AGG + chr7_4:49609205-49609224 Msa1159880:intron 45.0%
! CTTCTGAAAAAGCCACTGAG+AGG + chr7_4:49609282-49609301 Msa1159880:intron 45.0%
TAGGTGAGCAGTGGACAATA+TGG - chr7_4:49609430-49609449 None:intergenic 45.0%
! TCTCACTGCTAAGAAGGTGT+GGG - chr7_4:49609758-49609777 None:intergenic 45.0%
ATCTCACTGCTAAGAAGGTG+TGG - chr7_4:49609759-49609778 None:intergenic 45.0%
GCTTACACTAAGCGTAAGAG+TGG + chr7_4:49610108-49610127 Msa1159880:intron 45.0%
TTTGCGCACCTAACAAGTGT+TGG - chr7_4:49610192-49610211 None:intergenic 45.0%
TTCGCCAAACCAAAGTTGTG+GGG - chr7_4:49610261-49610280 None:intergenic 45.0%
CTTCGCCAAACCAAAGTTGT+GGG - chr7_4:49610262-49610281 None:intergenic 45.0%
TCTTCGCCAAACCAAAGTTG+TGG - chr7_4:49610263-49610282 None:intergenic 45.0%
!! TTTTAGAAGCAACAGGGCCA+GGG - chr7_4:49610316-49610335 None:intergenic 45.0%
!! ATTTTAGAAGCAACAGGGCC+AGG - chr7_4:49610317-49610336 None:intergenic 45.0%
!! GCTGAGACCTAGTTCTAACA+TGG - chr7_4:49611012-49611031 None:intergenic 45.0%
!! AATGCCGATTTAACTGGGTG+TGG - chr7_4:49611515-49611534 None:intergenic 45.0%
!! CGGGAAAATGCCGATTTAAC+TGG - chr7_4:49611521-49611540 None:intergenic 45.0%
TTTCCCGTTAAATTCGAGGG+GGG + chr7_4:49611534-49611553 Msa1159880:intron 45.0%
AAACTCACACACACAAGTGG+AGG - chr7_4:49612340-49612359 None:intergenic 45.0%
AAGAGATTGAGCGGGAATAG+AGG - chr7_4:49612450-49612469 None:intergenic 45.0%
! TTTTGGCGAAGAGATTGAGC+GGG - chr7_4:49612458-49612477 None:intergenic 45.0%
!! GTTTTGGCGAAGAGATTGAG+CGG - chr7_4:49612459-49612478 None:intergenic 45.0%
AAGAGATTGAGCGGGAATAG+AGG - chr7_4:49612450-49612469 None:intergenic 45.0%
! TTTTGGCGAAGAGATTGAGC+GGG - chr7_4:49612458-49612477 None:intergenic 45.0%
!! GTTTTGGCGAAGAGATTGAG+CGG - chr7_4:49612459-49612478 None:intergenic 45.0%
GAGATCTACTGCGGAATCTT+AGG - chr7_4:49612769-49612788 None:intergenic 45.0%
AGAGCAGTAGAGATCTACTG+CGG - chr7_4:49612778-49612797 None:intergenic 45.0%
TCTCTACTGCTCTTACATCC+TGG + chr7_4:49612785-49612804 Msa1159880:intron 45.0%
GGCAACATAGTAGATGAAGG+GGG + chr7_4:49612918-49612937 Msa1159880:intron 45.0%
CATAGTAGATGAAGGGGGTA+TGG + chr7_4:49612923-49612942 Msa1159880:intron 45.0%
ACACATATGCCATATAGGGC+TGG + chr7_4:49613240-49613259 Msa1159880:intron 45.0%
CGACTCGACAATTAACTCGT+TGG + chr7_4:49613299-49613318 Msa1159880:intron 45.0%
GACAATTAACTCGTTGGTCC+TGG + chr7_4:49613305-49613324 Msa1159880:intron 45.0%
AGTTCGCGAACCATTCGATT+CGG - chr7_4:49613817-49613836 None:intergenic 45.0%
! CGACTCGACTCGATAAGTAT+TGG - chr7_4:49613904-49613923 None:intergenic 45.0%
! CACCGTTTTCCTATGGCATT+AGG - chr7_4:49613950-49613969 None:intergenic 45.0%
! TAGTTGGCACCGTTTTCCTA+TGG - chr7_4:49613957-49613976 None:intergenic 45.0%
GTGGCTAGGAAAATGTGTGA+TGG - chr7_4:49614144-49614163 None:intergenic 45.0%
ATTCAAACGTGTGTGTGGCT+AGG - chr7_4:49614158-49614177 None:intergenic 45.0%
GTGGCTAGGAAAATGTGTGA+TGG - chr7_4:49614144-49614163 None:intergenic 45.0%
AGCGTGAGTTAACATGCGTA+TGG + chr7_4:49614395-49614414 Msa1159880:intron 45.0%
AACGTGAGTTAACTCACGCA+TGG + chr7_4:49615032-49615051 Msa1159880:intron 45.0%
ACGTGAGTTAACTCACGCAT+GGG + chr7_4:49615033-49615052 Msa1159880:intron 45.0%
ACAGAGGTAGATTGGAGAGA+TGG - chr7_4:49615956-49615975 None:intergenic 45.0%
CTCTCCAATCTACCTCTGTT+TGG + chr7_4:49615957-49615976 Msa1159880:intron 45.0%
ACTCCCAAACAGAGGTAGAT+TGG - chr7_4:49615964-49615983 None:intergenic 45.0%
TACCTCTGTTTGGGAGTTCA+TGG + chr7_4:49615967-49615986 Msa1159880:intron 45.0%
!!! GAGCATCGGCAACAATTTTG+AGG - chr7_4:49616000-49616019 None:intergenic 45.0%
AACTCGTCGGATTTGAGCAT+CGG - chr7_4:49616014-49616033 None:intergenic 45.0%
CTGCGTGAATCGGAAATGAA+AGG - chr7_4:49616052-49616071 None:intergenic 45.0%
TCTTCCGTGAACTTAGTGGT+TGG - chr7_4:49616644-49616663 None:intergenic 45.0%
AACCACTAAGTTCACGGAAG+AGG + chr7_4:49616643-49616662 Msa1159880:intron 45.0%
AACCTCTTCCGTGAACTTAG+TGG - chr7_4:49616648-49616667 None:intergenic 45.0%
! TCTAACTTGTCTCGCTCTGA+TGG + chr7_4:49616712-49616731 Msa1159880:intron 45.0%
CTAAGAGAGAGTGGTACATG+GGG - chr7_4:49616758-49616777 None:intergenic 45.0%
GACTAAGAGAGAGTGGTACA+TGG - chr7_4:49616760-49616779 None:intergenic 45.0%
CTAGCTCATCAGCGTAAACT+TGG - chr7_4:49616890-49616909 None:intergenic 45.0%
! TGATAACGCACTATTCCCTG+TGG - chr7_4:49617239-49617258 None:intergenic 45.0%
CAGGGAATAGTGCGTTATCA+AGG + chr7_4:49617239-49617258 Msa1159880:intron 45.0%
TTACGTGTGACGCTTGGTTA+AGG - chr7_4:49617394-49617413 None:intergenic 45.0%
ATTAGGTTACGTGTGACGCT+TGG - chr7_4:49617400-49617419 None:intergenic 45.0%
ATCATCATGGAAGCCTTGCA+AGG + chr7_4:49617864-49617883 Msa1159880:intron 45.0%
!! ATTTTGGCAGAAGTTGTCCC+TGG - chr7_4:49618257-49618276 None:intergenic 45.0%
TGGGCTAATTCCTGCACAAA+AGG + chr7_4:49618315-49618334 Msa1159880:intron 45.0%
!!! GCGACTGCTTCTTTTGAGAT+GGG + chr7_4:49618485-49618504 Msa1159880:intron 45.0%
!! ATTACTGGGGCAGCTTTAGA+TGG + chr7_4:49618733-49618752 Msa1159880:intron 45.0%
GTGTAAGGCTACGTTCATAG+AGG + chr7_4:49619041-49619060 Msa1159880:intron 45.0%
ATGGTGCAAACAAGGTGTGA+TGG + chr7_4:49619278-49619297 Msa1159880:intron 45.0%
TAGGCTCTGCAAACAAGTTC+AGG - chr7_4:49619352-49619371 None:intergenic 45.0%
TTTGCAGAGCCTAACCAATG+TGG + chr7_4:49619359-49619378 Msa1159880:intron 45.0%
GGTCAATGGGATTGATGCTA+TGG + chr7_4:49619434-49619453 Msa1159880:intron 45.0%
GAGAGAGACAAAGGTTACAG+AGG - chr7_4:49619563-49619582 None:intergenic 45.0%
! CTAAACGGTGGAGGTATATG+TGG + chr7_4:49620402-49620421 Msa1159880:intron 45.0%
!!! TAATTAAAATTCATTTTTTA+AGG + chr7_4:49612636-49612655 Msa1159880:intron 5.0%
!! ATTTAAAAAATAATAATACT+AGG - chr7_4:49613594-49613613 None:intergenic 5.0%
!!! GTATTATTATTTTTTAAATT+TGG + chr7_4:49613595-49613614 Msa1159880:intron 5.0%
GTCAAACCGAAGTTGTGGGA+CGG - chr7_4:49607227-49607246 None:intergenic 50.0%
TACGAGAATCTCGATGACCC+TGG + chr7_4:49607265-49607284 Msa1159880:CDS 50.0%
! CGTGGATCCCTATTTTGTCG+AGG + chr7_4:49607407-49607426 Msa1159880:CDS 50.0%
!!! GAAGTTTTTAGCAGCGTGGG+AGG - chr7_4:49608239-49608258 None:intergenic 50.0%
TCCAACTCCTCTGAATGCTC+GGG - chr7_4:49608488-49608507 None:intergenic 50.0%
ATGTCAGATGTGTTCGACCC+TGG - chr7_4:49609092-49609111 None:intergenic 50.0%
GGGAACCCAACAAGTGTTAG+AGG - chr7_4:49610026-49610045 None:intergenic 50.0%
TCAGCCCCACAACTTTGGTT+TGG + chr7_4:49610254-49610273 Msa1159880:CDS 50.0%
TACAAGGATCTCGATGACCC+TGG + chr7_4:49610296-49610315 Msa1159880:CDS 50.0%
ATTCGAGTCCGGTGCACTTA+GGG + chr7_4:49610640-49610659 Msa1159880:CDS 50.0%
! AGAGTTTTCGCAGATGGGGT+CGG - chr7_4:49611270-49611289 None:intergenic 50.0%
AGCGCCACACCCAGTTAAAT+CGG + chr7_4:49611508-49611527 Msa1159880:intron 50.0%
TTCCCGTTAAATTCGAGGGG+GGG + chr7_4:49611535-49611554 Msa1159880:intron 50.0%
GTTCTGCTCGTGCGATTTGT+TGG - chr7_4:49612206-49612225 None:intergenic 50.0%
GTCAGTTGAGCTAGGACTTG+TGG - chr7_4:49612265-49612284 None:intergenic 50.0%
CGGCATTTGTCAGTTGAGCT+AGG - chr7_4:49612273-49612292 None:intergenic 50.0%
GGCATCCGGCCTAACAATTT+CGG - chr7_4:49612293-49612312 None:intergenic 50.0%
! ACACACACAAGTGGAGGTAC+CGG - chr7_4:49612334-49612353 None:intergenic 50.0%
GCGTGAGTTAACATGCGTAG+AGG - chr7_4:49613038-49613057 None:intergenic 50.0%
CACGTAGCGTGAGTTAACTC+AGG - chr7_4:49613095-49613114 None:intergenic 50.0%
GGTTCATTGCCAGCCCTATA+TGG - chr7_4:49613252-49613271 None:intergenic 50.0%
CAGCCCAAGTTCAGCTCATT+TGG - chr7_4:49613339-49613358 None:intergenic 50.0%
ACCTAACGAGCCGAATCGAA+TGG + chr7_4:49613804-49613823 Msa1159880:intron 50.0%
!! ACCATTCGATTCGGCTCGTT+AGG - chr7_4:49613808-49613827 None:intergenic 50.0%
CAGTGTGAGTTAACTCACGC+TGG - chr7_4:49614285-49614304 None:intergenic 50.0%
GAGGTAGATTGGAGAGATGG+TGG - chr7_4:49615953-49615972 None:intergenic 50.0%
!! CTCTTTGAGGTATCAGGCCT+AGG + chr7_4:49616517-49616536 Msa1159880:intron 50.0%
ATGGAGATTCCCGAGCCAAA+TGG + chr7_4:49616919-49616938 Msa1159880:intron 50.0%
GATTCCCGAGCCAAATGGTT+AGG + chr7_4:49616924-49616943 Msa1159880:intron 50.0%
TCATGGAAGCCTTGCAAGGA+TGG + chr7_4:49617868-49617887 Msa1159880:intron 50.0%
! GACGGTTTGCTCAAAGCAAG+TGG - chr7_4:49618141-49618160 None:intergenic 50.0%
CTCGCAATTGCGAGTAAGGA+CGG - chr7_4:49618159-49618178 None:intergenic 50.0%
TTGCGAGCAAGCACAAATCC+AGG + chr7_4:49618236-49618255 Msa1159880:intron 50.0%
TGCGAGCAAGCACAAATCCA+GGG + chr7_4:49618237-49618256 Msa1159880:intron 50.0%
!! GGCGACTGCTTCTTTTGAGA+TGG + chr7_4:49618484-49618503 Msa1159880:intron 50.0%
GCTTCAACTCCCGTCTGTTT+CGG + chr7_4:49618527-49618546 Msa1159880:intron 50.0%
TAGTAGCTGCCGAAACAGAC+GGG - chr7_4:49618539-49618558 None:intergenic 50.0%
GTAGTAGCTGCCGAAACAGA+CGG - chr7_4:49618540-49618559 None:intergenic 50.0%
CCTATCTGTACGAGTCGTTG+AGG - chr7_4:49619084-49619103 None:intergenic 50.0%
CCTCAACGACTCGTACAGAT+AGG + chr7_4:49619081-49619100 Msa1159880:intron 50.0%
GTGCAAACAAGGTGTGATGG+AGG + chr7_4:49619281-49619300 Msa1159880:intron 50.0%
CTATTGAATCGGCCGTAGCA+TGG - chr7_4:49619942-49619961 None:intergenic 50.0%
ATGCCGTCAGTGACATTGCA+TGG - chr7_4:49620335-49620354 None:intergenic 50.0%
ATGTTCCACACCCACGACTT+TGG + chr7_4:49620429-49620448 Msa1159880:intron 50.0%
TCAAACCAAAGTCGTGGGTG+TGG - chr7_4:49620437-49620456 None:intergenic 50.0%
AAACCGAAGTTGTGGGACGG+AGG - chr7_4:49607224-49607243 None:intergenic 55.0%
AAGCTGCCGAAACCTCTCAG+TGG - chr7_4:49609297-49609316 None:intergenic 55.0%
!! GCGCACCTAACAAGTGTTGG+AGG - chr7_4:49610189-49610208 None:intergenic 55.0%
GGACTTCAGCCCCACAACTT+TGG + chr7_4:49610249-49610268 Msa1159880:CDS 55.0%
CATTCGAGTCCGGTGCACTT+AGG + chr7_4:49610639-49610658 Msa1159880:CDS 55.0%
! AGTTTTCGCAGATGGGGTCG+GGG - chr7_4:49611268-49611287 None:intergenic 55.0%
! GAGTTTTCGCAGATGGGGTC+GGG - chr7_4:49611269-49611288 None:intergenic 55.0%
TCCCGTTAAATTCGAGGGGG+GGG + chr7_4:49611536-49611555 Msa1159880:intron 55.0%
!! ACACACAAGTGGAGGTACCG+GGG - chr7_4:49612332-49612351 None:intergenic 55.0%
!! CACACACAAGTGGAGGTACC+GGG - chr7_4:49612333-49612352 None:intergenic 55.0%
CAGCGTGAGTTAACTCACGC+TGG + chr7_4:49613149-49613168 Msa1159880:intron 55.0%
TGCAGTGGAGATCGGAGTTG+CGG - chr7_4:49615880-49615899 None:intergenic 55.0%
!! GATGGTGGAGACCGACTCTA+CGG - chr7_4:49615938-49615957 None:intergenic 55.0%
GGCCATGAACTCCCAAACAG+AGG - chr7_4:49615972-49615991 None:intergenic 55.0%
TGTCTCGCTCTGATGGCATC+AGG + chr7_4:49616719-49616738 Msa1159880:intron 55.0%
CTCTGATGGCATCAGGTCAG+TGG + chr7_4:49616726-49616745 Msa1159880:intron 55.0%
CAAAGCTCGCAACTGCGAGT+AGG - chr7_4:49618215-49618234 None:intergenic 55.0%
CTACTCGCAGTTGCGAGCTT+TGG + chr7_4:49618213-49618232 Msa1159880:intron 55.0%
GCAGCTACTACTGCTGCAGA+TGG + chr7_4:49618549-49618568 Msa1159880:intron 55.0%
TCAAGGCGGAGCTGAGTGTA+AGG + chr7_4:49619026-49619045 Msa1159880:intron 55.0%
GGACCTCCGTCCCACAACTT+CGG + chr7_4:49607218-49607237 Msa1159880:CDS 60.0%
GCCCGAGCATTCAGAGGAGT+TGG + chr7_4:49608484-49608503 Msa1159880:intron 60.0%
CCCCCCCCCTCGAATTTAAC+GGG - chr7_4:49611540-49611559 None:intergenic 60.0%
CCCGTTAAATTCGAGGGGGG+GGG + chr7_4:49611537-49611556 Msa1159880:intron 60.0%
CCCCCCCCCCTCGAATTTAA+CGG - chr7_4:49611541-49611560 None:intergenic 60.0%
CCGTTAAATTCGAGGGGGGG+GGG + chr7_4:49611538-49611557 Msa1159880:intron 60.0%
CGTTAAATTCGAGGGGGGGG+GGG + chr7_4:49611539-49611558 Msa1159880:intron 60.0%
GTTAAATTCGAGGGGGGGGG+GGG + chr7_4:49611540-49611559 Msa1159880:intron 60.0%
TTAAATTCGAGGGGGGGGGG+GGG + chr7_4:49611541-49611560 Msa1159880:intron 60.0%
GTTAGGCCGGATGCCATGAC+CGG + chr7_4:49612298-49612317 Msa1159880:intron 60.0%
TTAGGCCGGATGCCATGACC+GGG + chr7_4:49612299-49612318 Msa1159880:intron 60.0%
AGCACGGTGGAGATCAGCGA+CGG - chr7_4:49615853-49615872 None:intergenic 60.0%
TCGGAGTTGCGGAGGTAGCA+CGG - chr7_4:49615869-49615888 None:intergenic 60.0%
AGTGGAGATCGGAGTTGCGG+AGG - chr7_4:49615877-49615896 None:intergenic 60.0%
GGCGTTGCTGCAGTGGAGAT+CGG - chr7_4:49615888-49615907 None:intergenic 60.0%
TACGGTGGAGATCGGCGCTA+TGG - chr7_4:49615909-49615928 None:intergenic 60.0%
!! GGAGGTGCTACGGTGGAGAT+CGG - chr7_4:49615917-49615936 None:intergenic 60.0%
!! ACTCTACGGAGGTGCTACGG+TGG - chr7_4:49615924-49615943 None:intergenic 60.0%
!! CCGACTCTACGGAGGTGCTA+CGG - chr7_4:49615927-49615946 None:intergenic 60.0%
CCGTAGCACCTCCGTAGAGT+CGG + chr7_4:49615924-49615943 Msa1159880:intron 60.0%
GCAAGCGCCCGAGCATTCAG+AGG + chr7_4:49608478-49608497 Msa1159880:intron 65.0%
TAGGCCGGATGCCATGACCG+GGG + chr7_4:49612300-49612319 Msa1159880:intron 65.0%
CGAACCCCGGTCATGGCATC+CGG - chr7_4:49612307-49612326 None:intergenic 65.0%
CATGACCGGGGTTCGAACCC+CGG + chr7_4:49612312-49612331 Msa1159880:intron 65.0%
!! AGGTACCGGGGTTCGAACCC+CGG - chr7_4:49612320-49612339 None:intergenic 65.0%
GAGTTGCGGAGGTAGCACGG+TGG - chr7_4:49615866-49615885 None:intergenic 65.0%
GCGCTATGGCGTTGCTGCAG+TGG - chr7_4:49615895-49615914 None:intergenic 65.0%
! GGTGGAGACCGACTCTACGG+AGG - chr7_4:49615935-49615954 None:intergenic 65.0%
GGGGTGTGTCTGGACGGAGG+CGG + chr7_4:49611560-49611579 Msa1159880:intron 70.0%
CGGGGTTCGAACCCCGGTCA+TGG - chr7_4:49612314-49612333 None:intergenic 70.0%
TCGCAGATGGGGTCGGGGCC+AGG - chr7_4:49611263-49611282 None:intergenic 75.0%
! GGGGGGGGGGTGTGTCTGGA+CGG + chr7_4:49611554-49611573 Msa1159880:intron 75.0%
! GGGGGGGTGTGTCTGGACGG+AGG + chr7_4:49611557-49611576 Msa1159880:intron 75.0%
!! AGGGGGGGGGGGGGTGTGTC+TGG + chr7_4:49611550-49611569 Msa1159880:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 49607063 49620935 49607063 ID=Msa1159880;Name=Msa1159880
chr7_4 mRNA 49607063 49620935 49607063 ID=Msa1159880-mRNA-1;Parent=Msa1159880;Name=Msa1159880-mRNA-1;_AED=0.34;_eAED=0.39;_QI=7|0|0|1|0|0|8|0|590
chr7_4 exon 49607063 49607303 49607063 ID=Msa1159880-mRNA-1:exon:13725;Parent=Msa1159880-mRNA-1
chr7_4 exon 49607385 49607615 49607385 ID=Msa1159880-mRNA-1:exon:13726;Parent=Msa1159880-mRNA-1
chr7_4 exon 49607625 49607870 49607625 ID=Msa1159880-mRNA-1:exon:13727;Parent=Msa1159880-mRNA-1
chr7_4 exon 49608818 49608873 49608818 ID=Msa1159880-mRNA-1:exon:13728;Parent=Msa1159880-mRNA-1
chr7_4 exon 49610241 49610480 49610241 ID=Msa1159880-mRNA-1:exon:13729;Parent=Msa1159880-mRNA-1
chr7_4 exon 49610568 49610753 49610568 ID=Msa1159880-mRNA-1:exon:13730;Parent=Msa1159880-mRNA-1
chr7_4 exon 49620259 49620382 49620259 ID=Msa1159880-mRNA-1:exon:13731;Parent=Msa1159880-mRNA-1
chr7_4 exon 49620483 49620935 49620483 ID=Msa1159880-mRNA-1:exon:13732;Parent=Msa1159880-mRNA-1
chr7_4 five_prime_UTR 49607063 49607069 49607063 ID=Msa1159880-mRNA-1:five_prime_utr;Parent=Msa1159880-mRNA-1
chr7_4 CDS 49607070 49607303 49607070 ID=Msa1159880-mRNA-1:cds;Parent=Msa1159880-mRNA-1
chr7_4 CDS 49607385 49607615 49607385 ID=Msa1159880-mRNA-1:cds;Parent=Msa1159880-mRNA-1
chr7_4 CDS 49607625 49607870 49607625 ID=Msa1159880-mRNA-1:cds;Parent=Msa1159880-mRNA-1
chr7_4 CDS 49608818 49608873 49608818 ID=Msa1159880-mRNA-1:cds;Parent=Msa1159880-mRNA-1
chr7_4 CDS 49610241 49610480 49610241 ID=Msa1159880-mRNA-1:cds;Parent=Msa1159880-mRNA-1
chr7_4 CDS 49610568 49610753 49610568 ID=Msa1159880-mRNA-1:cds;Parent=Msa1159880-mRNA-1
chr7_4 CDS 49620259 49620382 49620259 ID=Msa1159880-mRNA-1:cds;Parent=Msa1159880-mRNA-1
chr7_4 CDS 49620483 49620935 49620483 ID=Msa1159880-mRNA-1:cds;Parent=Msa1159880-mRNA-1
Gene Sequence

>Msa1159880

ATGACTCTGTCTAACAAGAAGGCCAGTCATGATCATATTGATCGAATCAGTGACTTACCATGTAATGTTATTGATGACATCCTAGCACGCTTGTACATCAAAGACCTAGTTAGGACTAGTATTTTGTCAAAAAAGTGGAGGTATATGTGGACCTCCGTCCCACAACTTCGGTTTGACGATGACTTTTTTGATGAGTACGAGAATCTCGATGACCCTGGCCCTGTAACTTCTAAAATCTCAATGGAATACATTGATACGTGGATCCCTATTTTGTCGAGGAGTATTAAACATCTCGAGCTTGTGAGCCAGAACAAACATCTCGATCAAATGCCATACATTGTCTTCTCTTGTAAGGAATTGACATTCTTTACATTTGCCGGATTTAACCTGTCAATTCCACCTGATTTCTGCGGCTTTAAAAGATTGCTTAATCTTCACTTATTGTCTGTTACATTCGAGGCCGGTAGTCTTATTTCTGGTTGTCCGTTACTTCAAACACTCAATATTGATGATTGTTGTGGTCCTGAATATTTTGAATTTGATGCTCCCACTCTCAAAGTCTTATGGCTAGATTTTGTTAAAGATATAAAGTCAATTTGTCTCAAGAAAGCAAAGAATCTGATTGATCTTAGACTCACAGTATCTGGTTTGATCAAAAGTTTGCCAAAAAACATTGAGAGGATTTCTATCTGTCAGCCTTACAATACCAAGAATCAACTTATCTATTGTTGTTGTTCTAGCCCAATTGAGCAGCAAGTTTATCAGCTGTATACGTGGACTTCAGCCCCACAACTTTGGTTTGGCGAAGACTTTTTTGACAAGTACAAGGATCTCGATGACCCTGGCCCTGTTGCTTCTAAAATCATCACAAATAATCTTATTCAACACAACAGTCCGATACATAAGTTTCATCTTTTCATACCTTATGACTACAATTTCAAGATCATAATTGAATTCCTCAGTAAGTGGATTATGTTTTTGTCTAGGAGGGATATTAAACATCTCGGATTTAACTTGTCAATTCCACATAATTTATGCGGCTTTAAAAGATTGCTTAATCTTCACTTATCTAATGTTACATTCGAGTCCGGTGCACTTAGGGTCTTATTTCTGGTTGTCCATTACTTGAAAAGCTCATCATTCAATTTTGTGAAGGTTTTGAATATTTTGATATTTCTGTTCCTACTCTCAAATTCTCTTAGGACTGAGACTATTTTCAACAAGAGGGACAGTCAAGATGATGATACTGATCGGATCAGTGACTTACCATGCAATGTCACTGACGGCATGCTAGCACACTTGAAAATCAAAGACCTGGATCTCGGTGATCCAGTAGCTTATAAAATTATCACAGATGTTCTAGTGCAACACAAAGGGCCGATAGATAAGTTTGGTCTTTTCATACCTCATGACTACAAATTCAAGATCACAATTGAACACCTCGATACATGGATTTCGTGTTTGTCAAAGAGGGATATTAAACATCTCGAGCTTGTGAACCACAAAACACATCTCAATCAAATGCCATATATTGTCCTCTCTTGTAAGGAATTGACTTACTTTAATTTTTCGAATTTGACTTGTCAATTCCACCTGATTTCTGTGGGTTTAAAAGATTGCTTGAACTTCACTTATTGTTTGTTAGATTCAAGCCTGGTTCACACAAGAGTCTTATTTCTTGTTGCCCGTTACTTAAAAATCTTCATATTGTATCATGTAAAGATTTTGAATATTTTGATTTTGCTTCTCCTACTCTTGAAGTCTTATCAA

Protein sequence

>Msa1159880

MTLSNKKASHDHIDRISDLPCNVIDDILARLYIKDLVRTSILSKKWRYMWTSVPQLRFDDDFFDEYENLDDPGPVTSKISMEYIDTWIPILSRSIKHLELVSQNKHLDQMPYIVFSCKELTFFTFAGFNLSIPPDFCGFKRLLNLHLLSVTFEAGSLISGCPLLQTLNIDDCCGPEYFEFDAPTLKVLWLDFVKDIKSICLKKAKNLIDLRLTVSGLIKSLPKNIERISICQPYNTKNQLIYCCCSSPIEQQVYQLYTWTSAPQLWFGEDFFDKYKDLDDPGPVASKIITNNLIQHNSPIHKFHLFIPYDYNFKIIIEFLSKWIMFLSRRDIKHLGFNLSIPHNLCGFKRLLNLHLSNVTFESGALRVLFLVVHYLKSSSFNFVKVLNILIFLFLLSNSLRTETIFNKRDSQDDDTDRISDLPCNVTDGMLAHLKIKDLDLGDPVAYKIITDVLVQHKGPIDKFGLFIPHDYKFKITIEHLDTWISCLSKRDIKHLELVNHKTHLNQMPYIVLSCKELTYFNFSNLTCQFHLISVGLKDCLNFTYCLLDSSLVHTRVLFLVARYLKIFILYHVKILNILILLLLLLKSYQ