Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1449350 | sp|Q96AE4|FUBP1_HUMAN | 31.984 | 247 | 146 | 7 | 29 | 263 | 33 | 269 | 4.45e-23 | 107 |
Msa1449350 | sp|Q96AE4|FUBP1_HUMAN | 33.921 | 227 | 129 | 6 | 38 | 251 | 231 | 449 | 5.00e-21 | 100 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1449350 | G7J7L9 | 97.030 | 606 | 17 | 1 | 1 | 606 | 1 | 605 | 0.0 | 1123 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004790 | Msa1449350 | 0.833507 | 5.124713e-56 | -8.615850e-47 |
Msa0005000 | Msa1449350 | 0.821837 | 3.264648e-53 | -8.615850e-47 |
Msa0005270 | Msa1449350 | -0.811418 | 7.070762e-51 | -8.615850e-47 |
Msa0029850 | Msa1449350 | -0.838433 | 2.884105e-57 | -8.615850e-47 |
Msa0038020 | Msa1449350 | -0.816262 | 6.056026e-52 | -8.615850e-47 |
Msa0042550 | Msa1449350 | -0.801759 | 7.737138e-49 | -8.615850e-47 |
Msa0043730 | Msa1449350 | -0.817854 | 2.657579e-52 | -8.615850e-47 |
Msa0048000 | Msa1449350 | -0.804282 | 2.328419e-49 | -8.615850e-47 |
Msa0052860 | Msa1449350 | -0.808020 | 3.801614e-50 | -8.615850e-47 |
Msa0053050 | Msa1449350 | 0.820607 | 6.273799e-53 | -8.615850e-47 |
Msa0077180 | Msa1449350 | -0.831423 | 1.683556e-55 | -8.615850e-47 |
Msa0084430 | Msa1449350 | -0.834030 | 3.793300e-56 | -8.615850e-47 |
Msa0085720 | Msa1449350 | -0.850741 | 1.395892e-60 | -8.615850e-47 |
Msa0090030 | Msa1449350 | -0.819437 | 1.162192e-52 | -8.615850e-47 |
Msa0090390 | Msa1449350 | -0.805544 | 1.268192e-49 | -8.615850e-47 |
Msa0092440 | Msa1449350 | -0.803958 | 2.718973e-49 | -8.615850e-47 |
Msa0096940 | Msa1449350 | 0.827308 | 1.680552e-54 | -8.615850e-47 |
Msa0098390 | Msa1449350 | 0.822770 | 1.982476e-53 | -8.615850e-47 |
Msa0099510 | Msa1449350 | -0.809119 | 2.215384e-50 | -8.615850e-47 |
Msa0109590 | Msa1449350 | -0.804855 | 1.767515e-49 | -8.615850e-47 |
Msa0120340 | Msa1449350 | -0.812532 | 4.043398e-51 | -8.615850e-47 |
Msa0120370 | Msa1449350 | 0.800200 | 1.611491e-48 | -8.615850e-47 |
Msa1350690 | Msa1449350 | -0.817649 | 2.955789e-52 | -8.615850e-47 |
Msa1352540 | Msa1449350 | 0.840000 | 1.131599e-57 | -8.615850e-47 |
Msa1359650 | Msa1449350 | 0.843505 | 1.344694e-58 | -8.615850e-47 |
Msa1360240 | Msa1449350 | -0.822303 | 2.545816e-53 | -8.615850e-47 |
Msa1363700 | Msa1449350 | -0.842165 | 3.054654e-58 | -8.615850e-47 |
Msa1364370 | Msa1449350 | -0.806885 | 6.618396e-50 | -8.615850e-47 |
Msa1371090 | Msa1449350 | -0.834155 | 3.530061e-56 | -8.615850e-47 |
Msa1371940 | Msa1449350 | -0.800360 | 1.495110e-48 | -8.615850e-47 |
Msa1372150 | Msa1449350 | -0.808076 | 3.699605e-50 | -8.615850e-47 |
Msa1373350 | Msa1449350 | -0.814689 | 1.355966e-51 | -8.615850e-47 |
Msa1375700 | Msa1449350 | 0.811941 | 5.442048e-51 | -8.615850e-47 |
Msa1376160 | Msa1449350 | 0.831575 | 1.544192e-55 | -8.615850e-47 |
Msa1390280 | Msa1449350 | 0.809904 | 1.502572e-50 | -8.615850e-47 |
Msa1394310 | Msa1449350 | -0.803383 | 3.578774e-49 | -8.615850e-47 |
Msa1396400 | Msa1449350 | 0.803245 | 3.821869e-49 | -8.615850e-47 |
Msa1404240 | Msa1449350 | 0.862741 | 4.089321e-64 | -8.615850e-47 |
Msa1407650 | Msa1449350 | -0.812477 | 4.157264e-51 | -8.615850e-47 |
Msa1417810 | Msa1449350 | 0.996666 | 1.521379e-230 | -8.615850e-47 |
Msa1417830 | Msa1449350 | 0.876076 | 1.861484e-68 | -8.615850e-47 |
Msa1422840 | Msa1449350 | -0.813183 | 2.911515e-51 | -8.615850e-47 |
Msa1431060 | Msa1449350 | -0.805560 | 1.258508e-49 | -8.615850e-47 |
Msa1433220 | Msa1449350 | -0.814139 | 1.793343e-51 | -8.615850e-47 |
Msa1435400 | Msa1449350 | -0.839216 | 1.808827e-57 | -8.615850e-47 |
Msa1437130 | Msa1449350 | -0.801023 | 1.094626e-48 | -8.615850e-47 |
Msa1440940 | Msa1449350 | -0.815435 | 9.256867e-52 | -8.615850e-47 |
Msa1443610 | Msa1449350 | -0.810491 | 1.122633e-50 | -8.615850e-47 |
Msa1444250 | Msa1449350 | 0.833376 | 5.525101e-56 | -8.615850e-47 |
Msa1445400 | Msa1449350 | 0.996757 | 8.447241e-232 | -8.615850e-47 |
Msa1445420 | Msa1449350 | 0.873645 | 1.252346e-67 | -8.615850e-47 |
Msa1447110 | Msa1449350 | -0.800979 | 1.117628e-48 | -8.615850e-47 |
Msa1449350 | Msa1451620 | 0.822283 | 2.573382e-53 | -8.615850e-47 |
Msa1449350 | Msa1459760 | 0.858907 | 5.967955e-63 | -8.615850e-47 |
Msa0609970 | Msa1449350 | -0.817661 | 2.937445e-52 | -8.615850e-47 |
Msa0612680 | Msa1449350 | 0.801036 | 1.088160e-48 | -8.615850e-47 |
Msa0613460 | Msa1449350 | -0.817980 | 2.489016e-52 | -8.615850e-47 |
Msa0614990 | Msa1449350 | -0.839160 | 1.870782e-57 | -8.615850e-47 |
Msa0617410 | Msa1449350 | 0.804267 | 2.345354e-49 | -8.615850e-47 |
Msa0621840 | Msa1449350 | -0.819065 | 1.411944e-52 | -8.615850e-47 |
Msa0625840 | Msa1449350 | 0.822832 | 1.917954e-53 | -8.615850e-47 |
Msa0626990 | Msa1449350 | -0.825496 | 4.542374e-54 | -8.615850e-47 |
Msa0627350 | Msa1449350 | -0.821347 | 4.237814e-53 | -8.615850e-47 |
Msa0628290 | Msa1449350 | -0.800007 | 1.763944e-48 | -8.615850e-47 |
Msa0643320 | Msa1449350 | -0.806205 | 9.211152e-50 | -8.615850e-47 |
Msa0648240 | Msa1449350 | 0.821291 | 4.366439e-53 | -8.615850e-47 |
Msa0650620 | Msa1449350 | -0.818952 | 1.498550e-52 | -8.615850e-47 |
Msa0653320 | Msa1449350 | 0.852603 | 4.141801e-61 | -8.615850e-47 |
Msa0661180 | Msa1449350 | 0.801750 | 7.770083e-49 | -8.615850e-47 |
Msa0670660 | Msa1449350 | -0.801944 | 7.089173e-49 | -8.615850e-47 |
Msa0679550 | Msa1449350 | -0.845746 | 3.350959e-59 | -8.615850e-47 |
Msa0683140 | Msa1449350 | -0.805546 | 1.266958e-49 | -8.615850e-47 |
Msa0693790 | Msa1449350 | -0.810258 | 1.260632e-50 | -8.615850e-47 |
Msa0716420 | Msa1449350 | 0.822512 | 2.276492e-53 | -8.615850e-47 |
Msa0724950 | Msa1449350 | -0.807322 | 5.349191e-50 | -8.615850e-47 |
Msa0743120 | Msa1449350 | 0.810041 | 1.403712e-50 | -8.615850e-47 |
Msa0744170 | Msa1449350 | 0.825534 | 4.449054e-54 | -8.615850e-47 |
Msa0747260 | Msa1449350 | -0.801733 | 7.832391e-49 | -8.615850e-47 |
Msa0747720 | Msa1449350 | 0.821456 | 3.999933e-53 | -8.615850e-47 |
Msa0748070 | Msa1449350 | -0.809190 | 2.138946e-50 | -8.615850e-47 |
Msa0749440 | Msa1449350 | -0.801357 | 9.353736e-49 | -8.615850e-47 |
Msa0750330 | Msa1449350 | 0.819537 | 1.102294e-52 | -8.615850e-47 |
Msa0751210 | Msa1449350 | -0.818405 | 1.993969e-52 | -8.615850e-47 |
Msa0754920 | Msa1449350 | -0.813584 | 2.377177e-51 | -8.615850e-47 |
Msa0760350 | Msa1449350 | -0.800361 | 1.494018e-48 | -8.615850e-47 |
Msa0788070 | Msa1449350 | 0.823573 | 1.288144e-53 | -8.615850e-47 |
Msa0791240 | Msa1449350 | -0.804620 | 1.979704e-49 | -8.615850e-47 |
Msa0791820 | Msa1449350 | -0.808863 | 2.512864e-50 | -8.615850e-47 |
Msa0794320 | Msa1449350 | -0.808746 | 2.662131e-50 | -8.615850e-47 |
Msa0794510 | Msa1449350 | 0.812982 | 3.223050e-51 | -8.615850e-47 |
Msa0799010 | Msa1449350 | 0.830564 | 2.735511e-55 | -8.615850e-47 |
Msa0801730 | Msa1449350 | -0.807067 | 6.056184e-50 | -8.615850e-47 |
Msa0820530 | Msa1449350 | 0.805631 | 1.216342e-49 | -8.615850e-47 |
Msa0831590 | Msa1449350 | -0.813712 | 2.227348e-51 | -8.615850e-47 |
Msa0837420 | Msa1449350 | 0.824463 | 7.962142e-54 | -8.615850e-47 |
Msa0837780 | Msa1449350 | -0.805715 | 1.167581e-49 | -8.615850e-47 |
Msa0124550 | Msa1449350 | -0.838329 | 3.068782e-57 | -8.615850e-47 |
Msa0125050 | Msa1449350 | -0.817386 | 3.387582e-52 | -8.615850e-47 |
Msa0130520 | Msa1449350 | -0.847783 | 9.292513e-60 | -8.615850e-47 |
Msa0137870 | Msa1449350 | -0.801588 | 8.389464e-49 | -8.615850e-47 |
Msa0140510 | Msa1449350 | 0.996515 | 1.587262e-228 | -8.615850e-47 |
Msa0140520 | Msa1449350 | 0.871314 | 7.512219e-67 | -8.615850e-47 |
Msa0144970 | Msa1449350 | 0.827855 | 1.242346e-54 | -8.615850e-47 |
Msa0148120 | Msa1449350 | -0.817249 | 3.636430e-52 | -8.615850e-47 |
Msa0161070 | Msa1449350 | 0.815352 | 9.659458e-52 | -8.615850e-47 |
Msa0169820 | Msa1449350 | -0.838044 | 3.632992e-57 | -8.615850e-47 |
Msa0175050 | Msa1449350 | -0.842846 | 2.015082e-58 | -8.615850e-47 |
Msa0176330 | Msa1449350 | -0.820418 | 6.932566e-53 | -8.615850e-47 |
Msa0178510 | Msa1449350 | -0.809380 | 1.947219e-50 | -8.615850e-47 |
Msa0178860 | Msa1449350 | 0.818195 | 2.225049e-52 | -8.615850e-47 |
Msa0183010 | Msa1449350 | 0.879830 | 9.042605e-70 | -8.615850e-47 |
Msa0187060 | Msa1449350 | -0.830171 | 3.412598e-55 | -8.615850e-47 |
Msa0193540 | Msa1449350 | -0.815050 | 1.127473e-51 | -8.615850e-47 |
Msa0199800 | Msa1449350 | 0.811828 | 5.758161e-51 | -8.615850e-47 |
Msa0212750 | Msa1449350 | 0.868999 | 4.300006e-66 | -8.615850e-47 |
Msa0230640 | Msa1449350 | 0.856112 | 4.008989e-62 | -8.615850e-47 |
Msa0236700 | Msa1449350 | 0.837024 | 6.634507e-57 | -8.615850e-47 |
Msa1224580 | Msa1449350 | 0.829016 | 6.515618e-55 | -8.615850e-47 |
Msa1228160 | Msa1449350 | 0.812838 | 3.465187e-51 | -8.615850e-47 |
Msa1229850 | Msa1449350 | -0.838725 | 2.424180e-57 | -8.615850e-47 |
Msa1235400 | Msa1449350 | -0.831051 | 2.077590e-55 | -8.615850e-47 |
Msa1236070 | Msa1449350 | 0.845869 | 3.102868e-59 | -8.615850e-47 |
Msa1241800 | Msa1449350 | -0.809467 | 1.865062e-50 | -8.615850e-47 |
Msa1242580 | Msa1449350 | 0.823942 | 1.055648e-53 | -8.615850e-47 |
Msa1244750 | Msa1449350 | 0.822360 | 2.469842e-53 | -8.615850e-47 |
Msa1247590 | Msa1449350 | 0.802298 | 5.995212e-49 | -8.615850e-47 |
Msa1257800 | Msa1449350 | 0.801880 | 7.307872e-49 | -8.615850e-47 |
Msa1258370 | Msa1449350 | -0.814817 | 1.269948e-51 | -8.615850e-47 |
Msa1258380 | Msa1449350 | 0.815283 | 1.000813e-51 | -8.615850e-47 |
Msa1259590 | Msa1449350 | 0.831097 | 2.025005e-55 | -8.615850e-47 |
Msa1263290 | Msa1449350 | 0.850533 | 1.597189e-60 | -8.615850e-47 |
Msa1270660 | Msa1449350 | -0.831703 | 1.436248e-55 | -8.615850e-47 |
Msa1270730 | Msa1449350 | -0.805302 | 1.425425e-49 | -8.615850e-47 |
Msa1271970 | Msa1449350 | 0.814852 | 1.247294e-51 | -8.615850e-47 |
Msa1272520 | Msa1449350 | -0.805603 | 1.232587e-49 | -8.615850e-47 |
Msa1276510 | Msa1449350 | -0.808629 | 2.819116e-50 | -8.615850e-47 |
Msa1293480 | Msa1449350 | 0.835677 | 1.459588e-56 | -8.615850e-47 |
Msa1299290 | Msa1449350 | 0.840358 | 9.126773e-58 | -8.615850e-47 |
Msa1299300 | Msa1449350 | 0.803466 | 3.440495e-49 | -8.615850e-47 |
Msa1305350 | Msa1449350 | -0.803693 | 3.085600e-49 | -8.615850e-47 |
Msa1307550 | Msa1449350 | -0.800907 | 1.156095e-48 | -8.615850e-47 |
Msa1307740 | Msa1449350 | -0.827311 | 1.678459e-54 | -8.615850e-47 |
Msa1314770 | Msa1449350 | -0.848703 | 5.177064e-60 | -8.615850e-47 |
Msa1322190 | Msa1449350 | -0.805497 | 1.297134e-49 | -8.615850e-47 |
Msa1335710 | Msa1449350 | -0.825671 | 4.127906e-54 | -8.615850e-47 |
Msa0365490 | Msa1449350 | -0.826758 | 2.276098e-54 | -8.615850e-47 |
Msa0377440 | Msa1449350 | -0.802346 | 5.860701e-49 | -8.615850e-47 |
Msa0377530 | Msa1449350 | -0.810872 | 9.285231e-51 | -8.615850e-47 |
Msa0381000 | Msa1449350 | -0.800017 | 1.755336e-48 | -8.615850e-47 |
Msa0381600 | Msa1449350 | 0.930554 | 1.383914e-93 | -8.615850e-47 |
Msa0383400 | Msa1449350 | 0.805143 | 1.538904e-49 | -8.615850e-47 |
Msa0388030 | Msa1449350 | 0.881611 | 2.078547e-70 | -8.615850e-47 |
Msa0389610 | Msa1449350 | 0.809442 | 1.888760e-50 | -8.615850e-47 |
Msa0389810 | Msa1449350 | -0.825112 | 5.596737e-54 | -8.615850e-47 |
Msa0390960 | Msa1449350 | -0.801141 | 1.035902e-48 | -8.615850e-47 |
Msa0392040 | Msa1449350 | 0.812263 | 4.629875e-51 | -8.615850e-47 |
Msa0394340 | Msa1449350 | -0.829822 | 4.150984e-55 | -8.615850e-47 |
Msa0408390 | Msa1449350 | -0.805287 | 1.435982e-49 | -8.615850e-47 |
Msa0412840 | Msa1449350 | -0.801532 | 8.612261e-49 | -8.615850e-47 |
Msa0419640 | Msa1449350 | 0.807304 | 5.395422e-50 | -8.615850e-47 |
Msa0430870 | Msa1449350 | -0.813085 | 3.059296e-51 | -8.615850e-47 |
Msa0433410 | Msa1449350 | 0.812828 | 3.482838e-51 | -8.615850e-47 |
Msa0436190 | Msa1449350 | -0.809920 | 1.490429e-50 | -8.615850e-47 |
Msa0442200 | Msa1449350 | -0.807152 | 5.811797e-50 | -8.615850e-47 |
Msa0442270 | Msa1449350 | -0.815851 | 7.479626e-52 | -8.615850e-47 |
Msa0457510 | Msa1449350 | -0.821680 | 3.550216e-53 | -8.615850e-47 |
Msa0458440 | Msa1449350 | -0.807623 | 4.618374e-50 | -8.615850e-47 |
Msa0464900 | Msa1449350 | -0.820337 | 7.234029e-53 | -8.615850e-47 |
Msa0468130 | Msa1449350 | -0.832857 | 7.438946e-56 | -8.615850e-47 |
Msa0469940 | Msa1449350 | 0.806676 | 7.327948e-50 | -8.615850e-47 |
Msa0472960 | Msa1449350 | 0.814359 | 1.604195e-51 | -8.615850e-47 |
Msa0473240 | Msa1449350 | -0.816181 | 6.311451e-52 | -8.615850e-47 |
Msa0482180 | Msa1449350 | -0.808590 | 2.873768e-50 | -8.615850e-47 |
Msa0482190 | Msa1449350 | 0.816206 | 6.231273e-52 | -8.615850e-47 |
Msa0981310 | Msa1449350 | -0.801764 | 7.719374e-49 | -8.615850e-47 |
Msa0982270 | Msa1449350 | -0.820829 | 5.577309e-53 | -8.615850e-47 |
Msa0992490 | Msa1449350 | 0.823579 | 1.283780e-53 | -8.615850e-47 |
Msa0994370 | Msa1449350 | -0.810213 | 1.288826e-50 | -8.615850e-47 |
Msa1002600 | Msa1449350 | 0.829666 | 4.530733e-55 | -8.615850e-47 |
Msa1005410 | Msa1449350 | -0.802874 | 4.561483e-49 | -8.615850e-47 |
Msa1006850 | Msa1449350 | -0.808016 | 3.810212e-50 | -8.615850e-47 |
Msa1008750 | Msa1449350 | -0.812177 | 4.833449e-51 | -8.615850e-47 |
Msa1012590 | Msa1449350 | 0.812030 | 5.204618e-51 | -8.615850e-47 |
Msa1021510 | Msa1449350 | -0.853521 | 2.261426e-61 | -8.615850e-47 |
Msa1029080 | Msa1449350 | 0.897277 | 1.642656e-76 | -8.615850e-47 |
Msa1031770 | Msa1449350 | -0.803591 | 3.239711e-49 | -8.615850e-47 |
Msa1033410 | Msa1449350 | 0.814149 | 1.784182e-51 | -8.615850e-47 |
Msa1034280 | Msa1449350 | -0.817936 | 2.546527e-52 | -8.615850e-47 |
Msa1037650 | Msa1449350 | 0.815817 | 7.611386e-52 | -8.615850e-47 |
Msa1038210 | Msa1449350 | 0.847151 | 1.386318e-59 | -8.615850e-47 |
Msa1040520 | Msa1449350 | -0.802042 | 6.768812e-49 | -8.615850e-47 |
Msa1047720 | Msa1449350 | -0.805899 | 1.068460e-49 | -8.615850e-47 |
Msa1048700 | Msa1449350 | -0.805502 | 1.294234e-49 | -8.615850e-47 |
Msa1054150 | Msa1449350 | 0.835546 | 1.575354e-56 | -8.615850e-47 |
Msa1063420 | Msa1449350 | -0.801779 | 7.666244e-49 | -8.615850e-47 |
Msa1070840 | Msa1449350 | -0.813646 | 2.303997e-51 | -8.615850e-47 |
Msa1073070 | Msa1449350 | 0.823549 | 1.304857e-53 | -8.615850e-47 |
Msa1075220 | Msa1449350 | 0.822566 | 2.211447e-53 | -8.615850e-47 |
Msa1076810 | Msa1449350 | 0.815205 | 1.041611e-51 | -8.615850e-47 |
Msa1079730 | Msa1449350 | 0.803616 | 3.202506e-49 | -8.615850e-47 |
Msa1080330 | Msa1449350 | 0.813755 | 2.179510e-51 | -8.615850e-47 |
Msa1081790 | Msa1449350 | 0.817288 | 3.564093e-52 | -8.615850e-47 |
Msa1092090 | Msa1449350 | -0.816939 | 4.269704e-52 | -8.615850e-47 |
Msa1094430 | Msa1449350 | -0.808332 | 3.263074e-50 | -8.615850e-47 |
Msa1096060 | Msa1449350 | -0.803676 | 3.111709e-49 | -8.615850e-47 |
Msa1096550 | Msa1449350 | -0.800725 | 1.259577e-48 | -8.615850e-47 |
Msa1105190 | Msa1449350 | -0.804275 | 2.335329e-49 | -8.615850e-47 |
Msa1105500 | Msa1449350 | -0.852888 | 3.434843e-61 | -8.615850e-47 |
Msa0241740 | Msa1449350 | -0.832890 | 7.300471e-56 | -8.615850e-47 |
Msa0249560 | Msa1449350 | -0.832128 | 1.127691e-55 | -8.615850e-47 |
Msa0266210 | Msa1449350 | -0.805493 | 1.300035e-49 | -8.615850e-47 |
Msa0266240 | Msa1449350 | -0.842258 | 2.885470e-58 | -8.615850e-47 |
Msa0268090 | Msa1449350 | -0.834621 | 2.696593e-56 | -8.615850e-47 |
Msa0271580 | Msa1449350 | -0.801165 | 1.023868e-48 | -8.615850e-47 |
Msa0274630 | Msa1449350 | -0.801132 | 1.040212e-48 | -8.615850e-47 |
Msa0277420 | Msa1449350 | -0.825182 | 5.387944e-54 | -8.615850e-47 |
Msa0279210 | Msa1449350 | 0.858552 | 7.619634e-63 | -8.615850e-47 |
Msa0279250 | Msa1449350 | 0.805330 | 1.406625e-49 | -8.615850e-47 |
Msa0279770 | Msa1449350 | -0.841678 | 4.107772e-58 | -8.615850e-47 |
Msa0287670 | Msa1449350 | -0.817251 | 3.633535e-52 | -8.615850e-47 |
Msa0288730 | Msa1449350 | -0.812660 | 3.792061e-51 | -8.615850e-47 |
Msa0295000 | Msa1449350 | 0.834949 | 2.228882e-56 | -8.615850e-47 |
Msa0296980 | Msa1449350 | 0.807505 | 4.892801e-50 | -8.615850e-47 |
Msa0306210 | Msa1449350 | 0.824211 | 9.125443e-54 | -8.615850e-47 |
Msa0308200 | Msa1449350 | -0.800342 | 1.507521e-48 | -8.615850e-47 |
Msa0314060 | Msa1449350 | -0.806350 | 8.586178e-50 | -8.615850e-47 |
Msa0318970 | Msa1449350 | 0.846677 | 1.868411e-59 | -8.615850e-47 |
Msa0319130 | Msa1449350 | -0.805940 | 1.047053e-49 | -8.615850e-47 |
Msa0347610 | Msa1449350 | -0.835287 | 1.832105e-56 | -8.615850e-47 |
Msa1113230 | Msa1449350 | 0.810168 | 1.317858e-50 | -8.615850e-47 |
Msa1116130 | Msa1449350 | 0.821860 | 3.225442e-53 | -8.615850e-47 |
Msa1118760 | Msa1449350 | -0.819827 | 9.465617e-53 | -8.615850e-47 |
Msa1124540 | Msa1449350 | 0.810953 | 8.919508e-51 | -8.615850e-47 |
Msa1127770 | Msa1449350 | -0.802551 | 5.316001e-49 | -8.615850e-47 |
Msa1133570 | Msa1449350 | -0.808303 | 3.309200e-50 | -8.615850e-47 |
Msa1135880 | Msa1449350 | -0.832387 | 9.731370e-56 | -8.615850e-47 |
Msa1139000 | Msa1449350 | 0.813447 | 2.548302e-51 | -8.615850e-47 |
Msa1144720 | Msa1449350 | 0.808245 | 3.404648e-50 | -8.615850e-47 |
Msa1156150 | Msa1449350 | 0.814219 | 1.722441e-51 | -8.615850e-47 |
Msa1156170 | Msa1449350 | 0.894816 | 1.726401e-75 | -8.615850e-47 |
Msa1158660 | Msa1449350 | -0.801493 | 8.772424e-49 | -8.615850e-47 |
Msa1159880 | Msa1449350 | 0.800307 | 1.532648e-48 | -8.615850e-47 |
Msa1160770 | Msa1449350 | 0.810415 | 1.165787e-50 | -8.615850e-47 |
Msa1162550 | Msa1449350 | 0.813551 | 2.416934e-51 | -8.615850e-47 |
Msa1163590 | Msa1449350 | 0.824675 | 7.099186e-54 | -8.615850e-47 |
Msa1164020 | Msa1449350 | -0.812491 | 4.128381e-51 | -8.615850e-47 |
Msa1166090 | Msa1449350 | 0.807151 | 5.815367e-50 | -8.615850e-47 |
Msa1168040 | Msa1449350 | 0.821711 | 3.491194e-53 | -8.615850e-47 |
Msa1172130 | Msa1449350 | 0.801738 | 7.816467e-49 | -8.615850e-47 |
Msa1174310 | Msa1449350 | -0.855508 | 6.021047e-62 | -8.615850e-47 |
Msa1176360 | Msa1449350 | -0.816870 | 4.425860e-52 | -8.615850e-47 |
Msa1177780 | Msa1449350 | -0.817090 | 3.948338e-52 | -8.615850e-47 |
Msa1183100 | Msa1449350 | 0.824917 | 6.225694e-54 | -8.615850e-47 |
Msa1188600 | Msa1449350 | 0.852144 | 5.598901e-61 | -8.615850e-47 |
Msa1190890 | Msa1449350 | 0.813114 | 3.014860e-51 | -8.615850e-47 |
Msa1196540 | Msa1449350 | 0.819908 | 9.072379e-53 | -8.615850e-47 |
Msa1202770 | Msa1449350 | 0.820804 | 5.650526e-53 | -8.615850e-47 |
Msa1207460 | Msa1449350 | 0.810042 | 1.402835e-50 | -8.615850e-47 |
Msa1207470 | Msa1449350 | 0.807794 | 4.246564e-50 | -8.615850e-47 |
Msa1211140 | Msa1449350 | 0.839088 | 1.952979e-57 | -8.615850e-47 |
Msa1211150 | Msa1449350 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
Msa1219810 | Msa1449350 | -0.817888 | 2.611002e-52 | -8.615850e-47 |
Msa0485490 | Msa1449350 | -0.805238 | 1.470403e-49 | -8.615850e-47 |
Msa0485500 | Msa1449350 | 0.808683 | 2.745005e-50 | -8.615850e-47 |
Msa0489610 | Msa1449350 | -0.843795 | 1.125006e-58 | -8.615850e-47 |
Msa0491520 | Msa1449350 | -0.806781 | 6.961404e-50 | -8.615850e-47 |
Msa0505060 | Msa1449350 | -0.816782 | 4.630758e-52 | -8.615850e-47 |
Msa0517490 | Msa1449350 | -0.815530 | 8.818314e-52 | -8.615850e-47 |
Msa0521740 | Msa1449350 | -0.815991 | 6.961219e-52 | -8.615850e-47 |
Msa0524600 | Msa1449350 | -0.826331 | 2.876804e-54 | -8.615850e-47 |
Msa0526670 | Msa1449350 | 0.831495 | 1.616422e-55 | -8.615850e-47 |
Msa0526740 | Msa1449350 | 0.801711 | 7.914765e-49 | -8.615850e-47 |
Msa0527910 | Msa1449350 | -0.804772 | 1.840299e-49 | -8.615850e-47 |
Msa0527980 | Msa1449350 | 0.818200 | 2.219217e-52 | -8.615850e-47 |
Msa0530650 | Msa1449350 | -0.821330 | 4.275250e-53 | -8.615850e-47 |
Msa0549780 | Msa1449350 | -0.810676 | 1.024046e-50 | -8.615850e-47 |
Msa0553220 | Msa1449350 | 0.802100 | 6.584040e-49 | -8.615850e-47 |
Msa0554380 | Msa1449350 | 0.820731 | 5.873308e-53 | -8.615850e-47 |
Msa0557950 | Msa1449350 | 0.849142 | 3.908673e-60 | -8.615850e-47 |
Msa0573040 | Msa1449350 | -0.808361 | 3.216397e-50 | -8.615850e-47 |
Msa0577200 | Msa1449350 | 0.814807 | 1.276495e-51 | -8.615850e-47 |
Msa0579370 | Msa1449350 | -0.832391 | 9.711857e-56 | -8.615850e-47 |
Msa0586850 | Msa1449350 | -0.802673 | 5.017595e-49 | -8.615850e-47 |
Msa0587190 | Msa1449350 | -0.840733 | 7.279390e-58 | -8.615850e-47 |
Msa0588220 | Msa1449350 | -0.805461 | 1.319894e-49 | -8.615850e-47 |
Msa0845070 | Msa1449350 | -0.821097 | 4.839903e-53 | -8.615850e-47 |
Msa0860900 | Msa1449350 | 0.855428 | 6.350325e-62 | -8.615850e-47 |
Msa0862800 | Msa1449350 | 0.818304 | 2.101545e-52 | -8.615850e-47 |
Msa0864470 | Msa1449350 | 0.858689 | 6.932249e-63 | -8.615850e-47 |
Msa0866400 | Msa1449350 | -0.828201 | 1.025634e-54 | -8.615850e-47 |
Msa0866410 | Msa1449350 | -0.813663 | 2.283675e-51 | -8.615850e-47 |
Msa0876850 | Msa1449350 | 0.811597 | 6.466924e-51 | -8.615850e-47 |
Msa0876860 | Msa1449350 | 0.828229 | 1.009682e-54 | -8.615850e-47 |
Msa0879860 | Msa1449350 | -0.808165 | 3.541985e-50 | -8.615850e-47 |
Msa0891600 | Msa1449350 | 0.845811 | 3.217353e-59 | -8.615850e-47 |
Msa0905380 | Msa1449350 | -0.801126 | 1.043118e-48 | -8.615850e-47 |
Msa0908170 | Msa1449350 | -0.807693 | 4.462348e-50 | -8.615850e-47 |
Msa0910980 | Msa1449350 | 0.804700 | 1.904924e-49 | -8.615850e-47 |
Msa0929960 | Msa1449350 | 0.831888 | 1.293214e-55 | -8.615850e-47 |
Msa0930400 | Msa1449350 | 0.831578 | 1.541987e-55 | -8.615850e-47 |
Msa0930820 | Msa1449350 | -0.825282 | 5.103830e-54 | -8.615850e-47 |
Msa0937330 | Msa1449350 | -0.832676 | 8.253030e-56 | -8.615850e-47 |
Msa0942550 | Msa1449350 | 0.852987 | 3.217019e-61 | -8.615850e-47 |
Msa0942560 | Msa1449350 | 0.825777 | 3.896147e-54 | -8.615850e-47 |
Msa0944730 | Msa1449350 | -0.844835 | 5.910655e-59 | -8.615850e-47 |
Msa0945100 | Msa1449350 | -0.819864 | 9.284125e-53 | -8.615850e-47 |
Msa0945120 | Msa1449350 | -0.811211 | 7.842093e-51 | -8.615850e-47 |
Msa0946690 | Msa1449350 | 0.844479 | 7.371614e-59 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1449350 | MtrunA17_Chr3g0135621 | 96.865 | 606 | 18 | 1 | 1 | 606 | 1 | 605 | 0.0 | 1120 |
Msa1449350 | MtrunA17_Chr3g0135631 | 96.287 | 404 | 14 | 1 | 203 | 606 | 1 | 403 | 0.0 | 712 |
Msa1449350 | MtrunA17_Chr1g0151761 | 62.969 | 640 | 142 | 18 | 1 | 588 | 1 | 597 | 0.0 | 593 |
Msa1449350 | MtrunA17_Chr3g0135641 | 98.942 | 189 | 2 | 0 | 1 | 189 | 1 | 189 | 2.87e-131 | 382 |
Msa1449350 | MtrunA17_Chr3g0135641 | 46.377 | 69 | 34 | 2 | 182 | 249 | 90 | 156 | 9.42e-13 | 67.4 |
Msa1449350 | MtrunA17_Chr5g0396111 | 56.069 | 173 | 72 | 1 | 82 | 250 | 181 | 353 | 8.82e-58 | 198 |
Msa1449350 | MtrunA17_Chr7g0217251 | 27.675 | 542 | 256 | 27 | 68 | 561 | 141 | 594 | 1.92e-12 | 70.1 |
Msa1449350 | MtrunA17_Chr1g0197441 | 29.187 | 209 | 117 | 6 | 89 | 283 | 39 | 230 | 1.44e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1449350 | AT2G25970.1 | 53.177 | 598 | 181 | 27 | 26 | 587 | 66 | 600 | 8.01e-129 | 392 |
Msa1449350 | AT1G33680.1 | 35.979 | 567 | 247 | 28 | 86 | 600 | 232 | 734 | 6.95e-54 | 196 |
Msa1449350 | AT4G10070.1 | 43.972 | 282 | 127 | 10 | 82 | 349 | 172 | 436 | 1.93e-53 | 194 |
Msa1449350 | AT5G04430.2 | 30.769 | 208 | 124 | 7 | 89 | 289 | 38 | 232 | 5.60e-14 | 73.9 |
Msa1449350 | AT5G04430.1 | 31.548 | 168 | 102 | 4 | 89 | 253 | 38 | 195 | 2.78e-12 | 68.6 |
Find 260 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGATGAAAACAAACTTATTT+TGG | 0.160449 | tig0032533:+25852 | Msa1449350:three_prime_UTR |
TCCATGTCATTTGCAGAATT+TGG | 0.165836 | tig0032533:+26039 | Msa1449350:three_prime_UTR |
CTTTAGGTTGGCCTTATAAT+TGG | 0.202642 | tig0032533:+23348 | Msa1449350:intron |
TTCTCTTGTGATGGTTATTA+TGG | 0.204549 | tig0032533:+25758 | Msa1449350:three_prime_UTR |
GGAACTTCGCCGCTCATTTC+AGG | 0.205981 | tig0032533:-26019 | None:intergenic |
GGTAGGGTTGGTGTTCTTAT+TGG | 0.218158 | tig0032533:+22058 | Msa1449350:CDS |
CAGTAGTGGGTTGGGAAGTT+TGG | 0.232400 | tig0032533:-25259 | None:intergenic |
GACTAGGATGGTTGAACTTA+TGG | 0.236098 | tig0032533:+22171 | Msa1449350:CDS |
CAGAATCGTCTCAGAAATTC+AGG | 0.249484 | tig0032533:+24687 | Msa1449350:intron |
AGTAGTGGGTTGGGAAGTTT+GGG | 0.253746 | tig0032533:-25258 | None:intergenic |
TATCGATGTTGCTATCAAAA+TGG | 0.259984 | tig0032533:-25813 | None:intergenic |
AGTGCAAATCCACCTGTTTA+TGG | 0.260187 | tig0032533:+25425 | Msa1449350:CDS |
CTCCTCCTTTACCAATTATA+AGG | 0.261517 | tig0032533:-23359 | None:intergenic |
TAGGCTGAAGCTGGGGCTTC+TGG | 0.266896 | tig0032533:+23164 | Msa1449350:intron |
AGTTGGAAGCGTGCCCTTCT+TGG | 0.286199 | tig0032533:-25214 | None:intergenic |
GGTTGGTAGCATAGCCTTGC+TGG | 0.287848 | tig0032533:-25286 | None:intergenic |
TTCACTTTCTTCCTCTCTAT+AGG | 0.289785 | tig0032533:+21743 | Msa1449350:five_prime_UTR |
ATTACTCCCACTGCCATAAC+TGG | 0.291727 | tig0032533:-25186 | None:intergenic |
CTCTATAGGGTTTGTTTCAA+TGG | 0.295151 | tig0032533:+21757 | Msa1449350:exon |
TTCTACCGGAGCACGAATTC+AGG | 0.305971 | tig0032533:+23404 | Msa1449350:CDS |
AGACGGATGGTTGCACAATC+TGG | 0.309169 | tig0032533:+23197 | Msa1449350:CDS |
ACCATCCTAGTCTGAGAATT+AGG | 0.309685 | tig0032533:-22160 | None:intergenic |
CATCCCCACACCTTATTGTT+TGG | 0.311267 | tig0032533:-23245 | None:intergenic |
CTTTCTGTTGATGTATCACC+TGG | 0.313635 | tig0032533:-23612 | None:intergenic |
TCACTTTCTTCCTCTCTATA+GGG | 0.320093 | tig0032533:+21744 | Msa1449350:five_prime_UTR |
GAAGGGCACGCTTCCAACTA+TGG | 0.327467 | tig0032533:+25218 | Msa1449350:CDS |
TGATGGTTATTATGGTCCTT+CGG | 0.350858 | tig0032533:+25766 | Msa1449350:three_prime_UTR |
GTGTGGGAAGGAATTGGATT+AGG | 0.357179 | tig0032533:-21714 | None:intergenic |
TTTGCTGTTGCTGGGGTTGT+TGG | 0.358645 | tig0032533:-24974 | None:intergenic |
TCATATGGAAATAGTTCTTA+TGG | 0.360383 | tig0032533:+25635 | Msa1449350:CDS |
GTTATCGGACTTGGTTCGTT+TGG | 0.360575 | tig0032533:-21936 | None:intergenic |
AACTTCTTGAGCTCGTTGTT+TGG | 0.361408 | tig0032533:-21864 | None:intergenic |
GAAGCTGGGGCTTCTGGCGG+TGG | 0.361827 | tig0032533:+23170 | Msa1449350:CDS |
TTTGCTGATTCAATTTGATC+AGG | 0.363459 | tig0032533:-23657 | None:intergenic |
GATTCAAGTTACTCGTGATA+TGG | 0.369842 | tig0032533:+22129 | Msa1449350:CDS |
CCATAGGCCGCTTGGGAGGT+AGG | 0.372582 | tig0032533:-25344 | None:intergenic |
TTTATTAACTAGGCTGAAGC+TGG | 0.373039 | tig0032533:+23155 | Msa1449350:intron |
TTATGGTGCTGGTTATGTTC+AGG | 0.375380 | tig0032533:+25652 | Msa1449350:CDS |
GATGCAAATACCAAACAATA+AGG | 0.377129 | tig0032533:+23235 | Msa1449350:CDS |
TTATCGGACTTGGTTCGTTT+GGG | 0.378392 | tig0032533:-21935 | None:intergenic |
GAGTTCGATGTCCGTGGCGG+TGG | 0.387307 | tig0032533:-21828 | None:intergenic |
CCGGTGGATATTCCACCAAC+TGG | 0.387764 | tig0032533:+24889 | Msa1449350:CDS |
AATGCGCAACAACAACAATC+TGG | 0.391525 | tig0032533:+25113 | Msa1449350:CDS |
TGTTGCTGATCATATGTTTG+TGG | 0.391746 | tig0032533:-25146 | None:intergenic |
GCTGAGCATACCCGGAAGGC+GGG | 0.392161 | tig0032533:-25511 | None:intergenic |
GGTCCTTCACAGCCAGCTGA+TGG | 0.395783 | tig0032533:+25005 | Msa1449350:CDS |
GGCCAGACTCCGCCGTCATA+TGG | 0.396618 | tig0032533:+25620 | Msa1449350:CDS |
TTAGCTCCTATTCAACCTTC+CGG | 0.397554 | tig0032533:-25889 | None:intergenic |
GTTGGTGTTCTTATTGGTAA+AGG | 0.399271 | tig0032533:+22064 | Msa1449350:CDS |
TGGAGCACCGTTATCGGACT+TGG | 0.399369 | tig0032533:-21945 | None:intergenic |
CCTACCTCCCAAGCGGCCTA+TGG | 0.399491 | tig0032533:+25344 | Msa1449350:CDS |
CCCCAGCAACAGCAAAATCC+TGG | 0.404109 | tig0032533:+24981 | Msa1449350:CDS |
TTCCATATGACGGCGGAGTC+TGG | 0.406065 | tig0032533:-25622 | None:intergenic |
AGTCAACCACAGTCTGGTTA+TGG | 0.407882 | tig0032533:+25368 | Msa1449350:CDS |
GTTGGAAGCGTGCCCTTCTT+GGG | 0.411122 | tig0032533:-25213 | None:intergenic |
TATGATCAGCAACAAGGTTA+TGG | 0.411167 | tig0032533:+25155 | Msa1449350:CDS |
CAAGGTGGCCAGCCTGGCTA+TGG | 0.413475 | tig0032533:+25599 | Msa1449350:CDS |
AATCCCGACCACCGTCTAGC+TGG | 0.415564 | tig0032533:+24742 | Msa1449350:CDS |
CATAGGCCGCTTGGGAGGTA+GGG | 0.417451 | tig0032533:-25343 | None:intergenic |
ACTAGGATGGTTGAACTTAT+GGG | 0.418819 | tig0032533:+22172 | Msa1449350:CDS |
AACTGCACAGGCTGTTCCAC+AGG | 0.420141 | tig0032533:+25700 | Msa1449350:CDS |
AACACGGTGTGGGAAGGAAT+TGG | 0.425308 | tig0032533:-21720 | None:intergenic |
TATGGCTCTGCTCCCAGTTA+TGG | 0.425707 | tig0032533:+25173 | Msa1449350:CDS |
TTACATTTATCTAAGCTGTA+TGG | 0.426408 | tig0032533:+25957 | Msa1449350:three_prime_UTR |
GATGGTTATTATGGTCCTTC+GGG | 0.428194 | tig0032533:+25767 | Msa1449350:three_prime_UTR |
AGCCAACCAGGACAGGGTTA+TGG | 0.429254 | tig0032533:+25068 | Msa1449350:CDS |
CTGGTTGAGGAGTTCCTTGT+TGG | 0.431801 | tig0032533:-25307 | None:intergenic |
GAAGCGTGCCCTTCTTGGGT+TGG | 0.433826 | tig0032533:-25209 | None:intergenic |
TGGTTATAGCCAACCAGGAC+AGG | 0.437107 | tig0032533:+25061 | Msa1449350:CDS |
TAGTGGGTTGGGAAGTTTGG+GGG | 0.438776 | tig0032533:-25256 | None:intergenic |
ATTGTGGAATATATGTTAAA+AGG | 0.439419 | tig0032533:+26066 | Msa1449350:three_prime_UTR |
CTGGGCAACAGTAGTGGGTT+GGG | 0.439592 | tig0032533:-25267 | None:intergenic |
GCTTGTTGCACAGGAGCAGC+AGG | 0.441689 | tig0032533:-24771 | None:intergenic |
TATTATGGTCCTTCGGGATG+TGG | 0.441964 | tig0032533:+25773 | Msa1449350:three_prime_UTR |
GCTCCTCAAGGTGGCCAGCC+TGG | 0.443253 | tig0032533:+25593 | Msa1449350:CDS |
TCTTGACCATAACCCTGTCC+TGG | 0.444195 | tig0032533:-25074 | None:intergenic |
CGATTGTGGAGCACCGTTAT+CGG | 0.444219 | tig0032533:-21951 | None:intergenic |
GACGGATGGTTGCACAATCT+GGG | 0.446354 | tig0032533:+23198 | Msa1449350:CDS |
CGATAACGGTGCTCCACAAT+CGG | 0.446619 | tig0032533:+21952 | Msa1449350:CDS |
ATCGATGTTGCTATCAAAAT+GGG | 0.453806 | tig0032533:-25812 | None:intergenic |
GTTGACTTCCATAGGCCGCT+TGG | 0.454305 | tig0032533:-25352 | None:intergenic |
AGCCCAGCTAGACGGTGGTC+GGG | 0.454864 | tig0032533:-24745 | None:intergenic |
AGTGGGTTGGGAAGTTTGGG+GGG | 0.456628 | tig0032533:-25255 | None:intergenic |
GTCCTTCACAGCCAGCTGAT+GGG | 0.456888 | tig0032533:+25006 | Msa1449350:CDS |
TGAGCATACCCGGAAGGCGG+GGG | 0.460955 | tig0032533:-25509 | None:intergenic |
TTGACTTCCATAGGCCGCTT+GGG | 0.461597 | tig0032533:-25351 | None:intergenic |
AGCTAGACGGTGGTCGGGAT+TGG | 0.461750 | tig0032533:-24740 | None:intergenic |
AATTGAATCAGCAAAGCAAT+TGG | 0.464801 | tig0032533:+23665 | Msa1449350:CDS |
AAGTATCTTCAGATGCAATC+TGG | 0.464861 | tig0032533:+22100 | Msa1449350:CDS |
CCTGTGCAACAAGCTGGTTA+TGG | 0.465420 | tig0032533:+24780 | Msa1449350:CDS |
AGAACACCAACCCTACCATT+AGG | 0.466222 | tig0032533:-22052 | None:intergenic |
TACAGTCAACCTCCTTCCTC+TGG | 0.467231 | tig0032533:+25041 | Msa1449350:CDS |
GATAACGGTGCTCCACAATC+GGG | 0.467332 | tig0032533:+21953 | Msa1449350:CDS |
GGAAATAGTTCTTATGGTGC+TGG | 0.472518 | tig0032533:+25641 | Msa1449350:CDS |
TTGCTGATTCAATTTGATCA+GGG | 0.472599 | tig0032533:-23656 | None:intergenic |
TCGCAGCAAGGTGGTAGTTA+TGG | 0.474269 | tig0032533:+22007 | Msa1449350:CDS |
AAGAAGATTGAAATACCTAA+TGG | 0.476293 | tig0032533:+22037 | Msa1449350:CDS |
GTTGGCCTTATAATTGGTAA+AGG | 0.477296 | tig0032533:+23354 | Msa1449350:CDS |
GGCGGAGTCTGGCCATAGCC+AGG | 0.479964 | tig0032533:-25611 | None:intergenic |
GACCCATCAGCTGGCTGTGA+AGG | 0.481746 | tig0032533:-25008 | None:intergenic |
GGTTATGGCTATGGGCAACC+TGG | 0.488138 | tig0032533:+24795 | Msa1449350:CDS |
GAGTCTGGCCATAGCCAGGC+TGG | 0.490778 | tig0032533:-25607 | None:intergenic |
CAACAAGCTGGTTATGGCTA+TGG | 0.490845 | tig0032533:+24786 | Msa1449350:CDS |
CCATAACCAGCTTGTTGCAC+AGG | 0.496256 | tig0032533:-24780 | None:intergenic |
GGCTGAGCATACCCGGAAGG+CGG | 0.497089 | tig0032533:-25512 | None:intergenic |
CTTCTGGCGGTGGCACTAGA+CGG | 0.497957 | tig0032533:+23180 | Msa1449350:CDS |
GATGGACCAGAGTATGATCC+AGG | 0.501151 | tig0032533:-24813 | None:intergenic |
CCAGTTGGTGGAATATCCAC+CGG | 0.501220 | tig0032533:-24889 | None:intergenic |
TTCTGTTGATGTATCACCTG+GGG | 0.507849 | tig0032533:-23610 | None:intergenic |
GTAGTGGGTTGGGAAGTTTG+GGG | 0.508308 | tig0032533:-25257 | None:intergenic |
CCCAGCAACAGCAAAATCCT+GGG | 0.508607 | tig0032533:+24982 | Msa1449350:CDS |
GTTGGTAGCATAGCCTTGCT+GGG | 0.508853 | tig0032533:-25285 | None:intergenic |
GGTGAGATGGTGCAGTGGAT+TGG | 0.508922 | tig0032533:-24914 | None:intergenic |
CCTAGCACAGCAGGAGGCTA+TGG | 0.510304 | tig0032533:+25461 | Msa1449350:CDS |
CTGCTCCCAGTTATGGCAGT+GGG | 0.512052 | tig0032533:+25180 | Msa1449350:CDS |
GACTGTGATTGACCATAAAC+AGG | 0.513068 | tig0032533:-25437 | None:intergenic |
TATGGAAGTCAACCACAGTC+TGG | 0.513429 | tig0032533:+25362 | Msa1449350:CDS |
CCATAGCCTCCTGCTGTGCT+AGG | 0.513919 | tig0032533:-25461 | None:intergenic |
TGCTGATTCAATTTGATCAG+GGG | 0.517465 | tig0032533:-23655 | None:intergenic |
TAACTCTGGCTGAGCATACC+CGG | 0.518719 | tig0032533:-25519 | None:intergenic |
GCTGCTCCTGTGCAACAAGC+TGG | 0.519086 | tig0032533:+24774 | Msa1449350:CDS |
CTTGGTTCGTTTGGGATCGT+AGG | 0.519590 | tig0032533:-21927 | None:intergenic |
GAAATACCTAATGGTAGGGT+TGG | 0.520361 | tig0032533:+22046 | Msa1449350:CDS |
TCACAGTCACCTAGCACAGC+AGG | 0.521102 | tig0032533:+25452 | Msa1449350:CDS |
GCTCTCTGAGTGCCTAACTC+TGG | 0.522190 | tig0032533:-25533 | None:intergenic |
TCAGCAGAAGAAACAGCGTC+AGG | 0.524572 | tig0032533:-22199 | None:intergenic |
GACCATAACCCTGTCCTGGT+TGG | 0.526303 | tig0032533:-25070 | None:intergenic |
ATAGGCCGCTTGGGAGGTAG+GGG | 0.527994 | tig0032533:-25342 | None:intergenic |
GCCTTGCTGGGCAACAGTAG+TGG | 0.528254 | tig0032533:-25273 | None:intergenic |
GCACCAGTGCAACCAGGGTA+TGG | 0.529757 | tig0032533:+25554 | Msa1449350:CDS |
ATCTGCTTGTGATCCATAGT+TGG | 0.529858 | tig0032533:-25231 | None:intergenic |
AGTTCGATGTCCGTGGCGGT+GGG | 0.530955 | tig0032533:-21827 | None:intergenic |
TGCAGAATTTGGTGCAATTG+TGG | 0.531451 | tig0032533:+26050 | Msa1449350:three_prime_UTR |
ATCCCGACCACCGTCTAGCT+GGG | 0.531596 | tig0032533:+24743 | Msa1449350:CDS |
TATCCACCGGGTTGCTGAGG+AGG | 0.532429 | tig0032533:-24876 | None:intergenic |
GGGAGTAATCCAACCCAAGA+AGG | 0.532914 | tig0032533:+25200 | Msa1449350:CDS |
GAGCCCAGCTAGACGGTGGT+CGG | 0.534258 | tig0032533:-24746 | None:intergenic |
GAGGGAGGAGCACCATAGCT+AGG | 0.535314 | tig0032533:-25392 | None:intergenic |
GGTGTTCTTATTGGTAAAGG+AGG | 0.535918 | tig0032533:+22067 | Msa1449350:CDS |
GCTGAAGCTGGGGCTTCTGG+CGG | 0.536744 | tig0032533:+23167 | Msa1449350:CDS |
AACAAGCTGGTTATGGCTAT+GGG | 0.538613 | tig0032533:+24787 | Msa1449350:CDS |
GCAGGAGGAGCCCAGCTAGA+CGG | 0.538714 | tig0032533:-24753 | None:intergenic |
CACCAGCAGTCTACTCATGC+AGG | 0.540059 | tig0032533:+24933 | Msa1449350:CDS |
TAAACAGGTGGATTTGCACT+TGG | 0.540765 | tig0032533:-25422 | None:intergenic |
GGGTATGCTCAGCCAGAGTT+AGG | 0.541597 | tig0032533:+25521 | Msa1449350:CDS |
TTATTAACTAGGCTGAAGCT+GGG | 0.541792 | tig0032533:+23156 | Msa1449350:intron |
TCTGCTCCCAGTTATGGCAG+TGG | 0.543356 | tig0032533:+25179 | Msa1449350:CDS |
ATGCCTCAGCCACCATATGC+AGG | 0.544233 | tig0032533:+24849 | Msa1449350:CDS |
GCTGGGCAACAGTAGTGGGT+TGG | 0.546458 | tig0032533:-25268 | None:intergenic |
CTGAGCATACCCGGAAGGCG+GGG | 0.547333 | tig0032533:-25510 | None:intergenic |
GCTCGTCTTCTCAGCGTCAC+CGG | 0.548114 | tig0032533:+21890 | Msa1449350:CDS |
TTTCTGTTGATGTATCACCT+GGG | 0.548846 | tig0032533:-23611 | None:intergenic |
CTGATCCTAATTCTCAGACT+AGG | 0.549418 | tig0032533:+22155 | Msa1449350:CDS |
TGAGGAGGATAGCCTGCATA+TGG | 0.549695 | tig0032533:-24861 | None:intergenic |
CAGAGAGCACCAGTGCAACC+AGG | 0.550434 | tig0032533:+25548 | Msa1449350:CDS |
TTGAGGAGTTCCTTGTTGGT+TGG | 0.551933 | tig0032533:-25303 | None:intergenic |
AAGAGTATGCAAGCTTCTAC+CGG | 0.552343 | tig0032533:+23390 | Msa1449350:CDS |
TAGCGATGGAGCAACTGCAC+AGG | 0.553254 | tig0032533:+25688 | Msa1449350:CDS |
TAGCCTGCATATGGTGGCTG+AGG | 0.553849 | tig0032533:-24852 | None:intergenic |
ATGCGCAACAACAACAATCT+GGG | 0.554757 | tig0032533:+25114 | Msa1449350:CDS |
GGACCATACCCTGGTTGCAC+TGG | 0.555058 | tig0032533:-25557 | None:intergenic |
GGCTATCCTCCTCAGCAACC+CGG | 0.555442 | tig0032533:+24870 | Msa1449350:CDS |
AGTGGATTGGTCCCAGTTGG+TGG | 0.555514 | tig0032533:-24901 | None:intergenic |
AGATTGAAATACCTAATGGT+AGG | 0.556097 | tig0032533:+22041 | Msa1449350:CDS |
AAACGAACCAAGTCCGATAA+CGG | 0.556846 | tig0032533:+21938 | Msa1449350:CDS |
TAGCCAGGCTGGCCACCTTG+AGG | 0.557256 | tig0032533:-25596 | None:intergenic |
TTGGTTAATCAAATCCTCAC+TGG | 0.558998 | tig0032533:+23684 | Msa1449350:CDS |
TCCTCTGGTTATAGCCAACC+AGG | 0.559096 | tig0032533:+25056 | Msa1449350:CDS |
CAATCATACGGTGCTCCTCA+AGG | 0.564374 | tig0032533:+25581 | Msa1449350:CDS |
CTCAGAAATTCAGGGAACTC+AGG | 0.566464 | tig0032533:+24696 | Msa1449350:CDS |
GAGAACCTGAATTCGTGCTC+CGG | 0.566604 | tig0032533:-23409 | None:intergenic |
GCTCCATCGCTAGCATACGC+TGG | 0.567046 | tig0032533:-25677 | None:intergenic |
GCTACTGCATAACCTGGTTG+AGG | 0.568505 | tig0032533:-25320 | None:intergenic |
TCTGGTTATGGACCTAGCTA+TGG | 0.569183 | tig0032533:+25380 | Msa1449350:CDS |
CTGTATGCAGACCCATCAGC+TGG | 0.570591 | tig0032533:-25017 | None:intergenic |
TAAGAATCAAACCCCGATTG+TGG | 0.574402 | tig0032533:-21965 | None:intergenic |
GGGTATGGTCCGCAATCATA+CGG | 0.574711 | tig0032533:+25569 | Msa1449350:CDS |
GGCCTTATAATTGGTAAAGG+AGG | 0.574874 | tig0032533:+23357 | Msa1449350:CDS |
GTAGGAGAGTGGTGGAGCGC+CGG | 0.574920 | tig0032533:-21909 | None:intergenic |
CCTTGCTGGGCAACAGTAGT+GGG | 0.574987 | tig0032533:-25272 | None:intergenic |
AGAATCGTCTCAGAAATTCA+GGG | 0.575702 | tig0032533:+24688 | Msa1449350:intron |
TGCAGTGGATTGGTCCCAGT+TGG | 0.578827 | tig0032533:-24904 | None:intergenic |
GCTCCAGCGTATGCTAGCGA+TGG | 0.580238 | tig0032533:+25674 | Msa1449350:CDS |
GGCATGTTATACTGCGGTGA+TGG | 0.581623 | tig0032533:-24831 | None:intergenic |
GATTGAAATACCTAATGGTA+GGG | 0.585821 | tig0032533:+22042 | Msa1449350:CDS |
CGGTGGATATTCCACCAACT+GGG | 0.586403 | tig0032533:+24890 | Msa1449350:CDS |
TGTTGCACAGGAGCAGCAGG+AGG | 0.586770 | tig0032533:-24768 | None:intergenic |
CAACAACAACAATCTGGGTA+TGG | 0.587718 | tig0032533:+25119 | Msa1449350:CDS |
GGGCAACCTGGATCATACTC+TGG | 0.588895 | tig0032533:+24807 | Msa1449350:CDS |
TGGCGGTGGCACTAGACGGA+TGG | 0.589779 | tig0032533:+23184 | Msa1449350:CDS |
GAATATCCACCGGGTTGCTG+AGG | 0.591522 | tig0032533:-24879 | None:intergenic |
CCCACTACTGTTGCCCAGCA+AGG | 0.593544 | tig0032533:+25272 | Msa1449350:CDS |
TTACTCCCACTGCCATAACT+GGG | 0.595665 | tig0032533:-25185 | None:intergenic |
ACCAAATTCTGCAAATGACA+TGG | 0.598545 | tig0032533:-26040 | None:intergenic |
CGTTTGGGATCGTAGGAGAG+TGG | 0.599323 | tig0032533:-21920 | None:intergenic |
ACGGATGGTTGCACAATCTG+GGG | 0.600123 | tig0032533:+23199 | Msa1449350:CDS |
CACCTGCATGAGTAGACTGC+TGG | 0.604282 | tig0032533:-24935 | None:intergenic |
AGTGAAAACACGGTGTGGGA+AGG | 0.605750 | tig0032533:-21726 | None:intergenic |
CAGTTGGTGGAATATCCACC+GGG | 0.607367 | tig0032533:-24888 | None:intergenic |
TAAGAACTATTTCCATATGA+CGG | 0.608805 | tig0032533:-25632 | None:intergenic |
TCCTAATTCTCAGACTAGGA+TGG | 0.609354 | tig0032533:+22159 | Msa1449350:CDS |
TGAGTAGACTGCTGGTGAGA+TGG | 0.609532 | tig0032533:-24927 | None:intergenic |
GGTTATAGCCAACCAGGACA+GGG | 0.609709 | tig0032533:+25062 | Msa1449350:CDS |
CCACCTTGCTGCGAGTATTG+CGG | 0.611213 | tig0032533:-21998 | None:intergenic |
GGAGTAATCCAACCCAAGAA+GGG | 0.613412 | tig0032533:+25201 | Msa1449350:CDS |
CATCAATGAAGTCCTTGCTG+AGG | 0.616712 | tig0032533:+22228 | Msa1449350:CDS |
TTGGGATCGTAGGAGAGTGG+TGG | 0.618282 | tig0032533:-21917 | None:intergenic |
AGAAAGTGAAAACACGGTGT+GGG | 0.622964 | tig0032533:-21730 | None:intergenic |
GGAGGAGCCCAGCTAGACGG+TGG | 0.623688 | tig0032533:-24750 | None:intergenic |
AGACTGTGGTTGACTTCCAT+AGG | 0.624998 | tig0032533:-25360 | None:intergenic |
TAATCAAATCCTCACTGGTG+AGG | 0.625790 | tig0032533:+23689 | Msa1449350:CDS |
CAACAAGGAACTCCTCAACC+AGG | 0.626608 | tig0032533:+25308 | Msa1449350:CDS |
TCTGTTGATGTATCACCTGG+GGG | 0.627155 | tig0032533:-23609 | None:intergenic |
GGTTATGGTCAAGAAAGCTA+TGG | 0.629248 | tig0032533:+25083 | Msa1449350:CDS |
ACTTCCATAGGCCGCTTGGG+AGG | 0.629551 | tig0032533:-25348 | None:intergenic |
TATGATTGCGGACCATACCC+TGG | 0.630591 | tig0032533:-25566 | None:intergenic |
TCCTGGTTGGCTATAACCAG+AGG | 0.630777 | tig0032533:-25057 | None:intergenic |
GGAGGATAGCCTGCATATGG+TGG | 0.632205 | tig0032533:-24858 | None:intergenic |
TATAGGGTTTGTTTCAATGG+CGG | 0.632326 | tig0032533:+21760 | Msa1449350:exon |
GTAGGGGCTACTGCATAACC+TGG | 0.633003 | tig0032533:-25326 | None:intergenic |
TTGAAACAAACCCTATAGAG+AGG | 0.634104 | tig0032533:-21754 | None:intergenic |
GACTTCGAGTTCGATGTCCG+TGG | 0.636506 | tig0032533:-21834 | None:intergenic |
AAATTAAAGCCACATCCCGA+AGG | 0.638216 | tig0032533:-25782 | None:intergenic |
GGCTATGCTACCAACCAACA+AGG | 0.638622 | tig0032533:+25293 | Msa1449350:CDS |
TGAGGAGCACCGTATGATTG+CGG | 0.639312 | tig0032533:-25578 | None:intergenic |
CAAACATATGATCAGCAACA+AGG | 0.642194 | tig0032533:+25149 | Msa1449350:CDS |
TATTAACTAGGCTGAAGCTG+GGG | 0.642830 | tig0032533:+23157 | Msa1449350:intron |
TCAGGTGGCTATACTCAGCA+AGG | 0.643161 | tig0032533:+24714 | Msa1449350:CDS |
CGATGAACAACCCACCGCCA+CGG | 0.645490 | tig0032533:+21817 | Msa1449350:CDS |
AAGAAAGTGAAAACACGGTG+TGG | 0.646849 | tig0032533:-21731 | None:intergenic |
AAGCCGCAATACTCGCAGCA+AGG | 0.647111 | tig0032533:+21995 | Msa1449350:CDS |
AGAGAGCACCAGTGCAACCA+GGG | 0.650050 | tig0032533:+25549 | Msa1449350:CDS |
ACTGCACAGGCTGTTCCACA+GGG | 0.651647 | tig0032533:+25701 | Msa1449350:CDS |
GATGTTGCTATCAAAATGGG+AGG | 0.651780 | tig0032533:-25809 | None:intergenic |
GGTTGGCTATAACCAGAGGA+AGG | 0.652858 | tig0032533:-25053 | None:intergenic |
TGGCTATAACCAGAGGAAGG+AGG | 0.658440 | tig0032533:-25050 | None:intergenic |
AGAAATTCAGGGAACTCAGG+TGG | 0.658761 | tig0032533:+24699 | Msa1449350:CDS |
GGTGTTACTAAAATGAACAC+AGG | 0.662051 | tig0032533:+26087 | Msa1449350:three_prime_UTR |
TCTGGCTGAGCATACCCGGA+AGG | 0.665619 | tig0032533:-25515 | None:intergenic |
CGGATGGTTGCACAATCTGG+GGG | 0.666739 | tig0032533:+23200 | Msa1449350:CDS |
CCAGCAACAGCAAAATCCTG+GGG | 0.670269 | tig0032533:+24983 | Msa1449350:CDS |
CAGTCACCTAGCACAGCAGG+AGG | 0.674325 | tig0032533:+25455 | Msa1449350:CDS |
AGAGGAAGAAAGTGAAAACA+CGG | 0.674928 | tig0032533:-21736 | None:intergenic |
TTCGAGTTCGATGTCCGTGG+CGG | 0.677834 | tig0032533:-21831 | None:intergenic |
CAGCAGTCTACTCATGCAGG+TGG | 0.682332 | tig0032533:+24936 | Msa1449350:CDS |
CTGCTGGTGAGATGGTGCAG+TGG | 0.682356 | tig0032533:-24919 | None:intergenic |
ATAACGGTGCTCCACAATCG+GGG | 0.686584 | tig0032533:+21954 | Msa1449350:CDS |
ACTTTAGCAACACCGCCCTG+TGG | 0.690074 | tig0032533:-25716 | None:intergenic |
CCGCAATACTCGCAGCAAGG+TGG | 0.697265 | tig0032533:+21998 | Msa1449350:CDS |
TGTGATTGACCATAAACAGG+TGG | 0.715400 | tig0032533:-25434 | None:intergenic |
TATCCTCCTCAGCAACCCGG+TGG | 0.720805 | tig0032533:+24873 | Msa1449350:CDS |
CTAGGTCCATAACCAGACTG+TGG | 0.724556 | tig0032533:-25374 | None:intergenic |
GCACAGGCTGTTCCACAGGG+CGG | 0.725045 | tig0032533:+25704 | Msa1449350:CDS |
GGTGACGCTGAGAAGACGAG+CGG | 0.728767 | tig0032533:-21888 | None:intergenic |
GAACTATTTCCATATGACGG+CGG | 0.728848 | tig0032533:-25629 | None:intergenic |
AGTAGCCCCTACCTCCCAAG+CGG | 0.730653 | tig0032533:+25337 | Msa1449350:CDS |
CAGCAACAGCAAAATCCTGG+GGG | 0.736266 | tig0032533:+24984 | Msa1449350:CDS |
TCATACGGTGCTCCTCAAGG+TGG | 0.736772 | tig0032533:+25584 | Msa1449350:CDS |
GGCTGAGGCATGTTATACTG+CGG | 0.750903 | tig0032533:-24837 | None:intergenic |
GATAACATACCTCACCAGTG+AGG | 0.751081 | tig0032533:-23698 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAAACTTAAAAAAGATT+TGG | - | tig0032533:23772-23791 | None:intergenic | 10.0% |
!!! | CTTTTTTAAGTTTAAAATTA+TGG | + | tig0032533:23775-23794 | Msa1449350:intron | 10.0% |
!!! | AAATTATGACTAATTTTTAT+TGG | + | tig0032533:24533-24552 | Msa1449350:intron | 10.0% |
!!! | TTTTTTTATACTCTTGTTTA+CGG | + | tig0032533:22254-22273 | Msa1449350:intron | 15.0% |
!!! | AAAAGGTCAATAATTTTATA+AGG | - | tig0032533:23857-23876 | None:intergenic | 15.0% |
!!! | AAAATGAATAACAATTTTGT+AGG | - | tig0032533:23890-23909 | None:intergenic | 15.0% |
!! | AAATTCACTTTCAATTATAA+TGG | + | tig0032533:24314-24333 | Msa1449350:intron | 15.0% |
!!! | TCTTATATTTTCAAAAACAT+AGG | - | tig0032533:26127-26146 | None:intergenic | 15.0% |
!! | TAATCAATGATATTTCACTA+AGG | - | tig0032533:22449-22468 | None:intergenic | 20.0% |
!!! | TGAAATACATTTTTACTAAC+AGG | - | tig0032533:22942-22961 | None:intergenic | 20.0% |
!! | TATATTATAGTTACAGAATC+AGG | - | tig0032533:23050-23069 | None:intergenic | 20.0% |
!!! | CTAATATCATCAATTTTTTC+AGG | + | tig0032533:23569-23588 | Msa1449350:intron | 20.0% |
!! | AAAGAACATTAAAAATCGAT+GGG | + | tig0032533:23631-23650 | Msa1449350:CDS | 20.0% |
!!! | ACACATTTTTTTGTTTTATC+TGG | + | tig0032533:23722-23741 | Msa1449350:intron | 20.0% |
!! | TTTAATCGTAAAACTAAACA+TGG | - | tig0032533:23809-23828 | None:intergenic | 20.0% |
!!! | TTAAAGTATTTCTTATCGTT+GGG | + | tig0032533:24207-24226 | Msa1449350:intron | 20.0% |
!! | ATTGAAAGTGAATTTAACAT+AGG | - | tig0032533:24309-24328 | None:intergenic | 20.0% |
!!! | TTTTATTTCATAGTTTGTTG+AGG | + | tig0032533:24361-24380 | Msa1449350:intron | 20.0% |
!!! | CTTCGTATATTTTTATGTTT+TGG | + | tig0032533:24614-24633 | Msa1449350:intron | 20.0% |
!!! | AGATGAAAACAAACTTATTT+TGG | + | tig0032533:25852-25871 | Msa1449350:three_prime_UTR | 20.0% |
!! | ATTGTGGAATATATGTTAAA+AGG | + | tig0032533:26066-26085 | Msa1449350:three_prime_UTR | 20.0% |
! | AAGAAGATTGAAATACCTAA+TGG | + | tig0032533:22037-22056 | Msa1449350:CDS | 25.0% |
! | ATAAAAAAAAAACCTCAGCA+AGG | - | tig0032533:22243-22262 | None:intergenic | 25.0% |
! | GTGATTTCAAAACATGAATT+GGG | - | tig0032533:22415-22434 | None:intergenic | 25.0% |
! | TACTCAAATGATGTTCAAAT+TGG | + | tig0032533:22560-22579 | Msa1449350:intron | 25.0% |
! | TAAATATGCTCAAATGATGT+TGG | + | tig0032533:23084-23103 | Msa1449350:intron | 25.0% |
!!! | ATACGTGTTGTTTATTAACT+AGG | + | tig0032533:23145-23164 | Msa1449350:intron | 25.0% |
!!! | TGTTTTGTTTATTCTCGTTT+GGG | + | tig0032533:23302-23321 | Msa1449350:intron | 25.0% |
! | GAAAGAACATTAAAAATCGA+TGG | + | tig0032533:23630-23649 | Msa1449350:CDS | 25.0% |
!!! | TTTATCTGGCTTATCATTTT+TGG | + | tig0032533:23736-23755 | Msa1449350:intron | 25.0% |
! | TCAACAAGTCAAAATTCAAA+AGG | - | tig0032533:24039-24058 | None:intergenic | 25.0% |
!!! | CAAAGTGTTGTCTAATTTTA+TGG | - | tig0032533:24075-24094 | None:intergenic | 25.0% |
! | TAAAATTAGACAACACTTTG+AGG | + | tig0032533:24075-24094 | Msa1449350:intron | 25.0% |
!! | CTTAAAGTATTTCTTATCGT+TGG | + | tig0032533:24206-24225 | Msa1449350:intron | 25.0% |
! | AGAATTGTTTCAATGTACTT+GGG | + | tig0032533:24418-24437 | Msa1449350:intron | 25.0% |
!! | CTAATTTTTATTGGCATCAA+CGG | + | tig0032533:24542-24561 | Msa1449350:intron | 25.0% |
!! | TAATTTTTATTGGCATCAAC+GGG | + | tig0032533:24543-24562 | Msa1449350:intron | 25.0% |
!!! | ATTTTTATGTTTTGGTACGT+TGG | + | tig0032533:24622-24641 | Msa1449350:intron | 25.0% |
!!! | TTTTTATGTTTTGGTACGTT+GGG | + | tig0032533:24623-24642 | Msa1449350:intron | 25.0% |
! | TAAGAACTATTTCCATATGA+CGG | - | tig0032533:25635-25654 | None:intergenic | 25.0% |
! | TCATATGGAAATAGTTCTTA+TGG | + | tig0032533:25635-25654 | Msa1449350:CDS | 25.0% |
!! | TTTGGTACTTGAATATTTTC+CGG | + | tig0032533:25870-25889 | Msa1449350:three_prime_UTR | 25.0% |
! | TTACATTTATCTAAGCTGTA+TGG | + | tig0032533:25957-25976 | Msa1449350:three_prime_UTR | 25.0% |
!!! | ATATTTTTACCTGAAATGAG+CGG | + | tig0032533:26010-26029 | Msa1449350:three_prime_UTR | 25.0% |
AGATTGAAATACCTAATGGT+AGG | + | tig0032533:22041-22060 | Msa1449350:CDS | 30.0% | |
GATTGAAATACCTAATGGTA+GGG | + | tig0032533:22042-22061 | Msa1449350:CDS | 30.0% | |
TACTGTAATTCTTACTAGTC+AGG | + | tig0032533:22309-22328 | Msa1449350:intron | 30.0% | |
ACTGTAATTCTTACTAGTCA+GGG | + | tig0032533:22310-22329 | Msa1449350:intron | 30.0% | |
GGTGATTTCAAAACATGAAT+TGG | - | tig0032533:22416-22435 | None:intergenic | 30.0% | |
TTTCACTAAGGTAACAGTTA+CGG | - | tig0032533:22437-22456 | None:intergenic | 30.0% | |
! | CTGATTTGATAACTGTTGTA+TGG | + | tig0032533:22482-22501 | Msa1449350:intron | 30.0% |
CTCAAATGATGTTTCAATGA+CGG | + | tig0032533:22658-22677 | Msa1449350:intron | 30.0% | |
TCTAATCTTGCACAATTTCA+TGG | + | tig0032533:22776-22795 | Msa1449350:intron | 30.0% | |
TTGGTGAAACATTCACTAAT+AGG | + | tig0032533:22831-22850 | Msa1449350:intron | 30.0% | |
GATGCAAATACCAAACAATA+AGG | + | tig0032533:23235-23254 | Msa1449350:CDS | 30.0% | |
AAATACCAAACAATAAGGTG+TGG | + | tig0032533:23240-23259 | Msa1449350:intron | 30.0% | |
AATACCAAACAATAAGGTGT+GGG | + | tig0032533:23241-23260 | Msa1449350:intron | 30.0% | |
!!! | GTGTTTTGTTTATTCTCGTT+TGG | + | tig0032533:23301-23320 | Msa1449350:intron | 30.0% |
!! | TTGCTGATTCAATTTGATCA+GGG | - | tig0032533:23659-23678 | None:intergenic | 30.0% |
!! | TTTGCTGATTCAATTTGATC+AGG | - | tig0032533:23660-23679 | None:intergenic | 30.0% |
AATTGAATCAGCAAAGCAAT+TGG | + | tig0032533:23665-23684 | Msa1449350:CDS | 30.0% | |
TTGTAGGAACTAAACTCAAA+AGG | - | tig0032533:23874-23893 | None:intergenic | 30.0% | |
!!! | GAGCACCTTATTTTTACAAA+AGG | - | tig0032533:23923-23942 | None:intergenic | 30.0% |
TGAGTTATCATGGTTTCATT+TGG | - | tig0032533:23976-23995 | None:intergenic | 30.0% | |
TTGATAAATCATAGCTACTG+CGG | - | tig0032533:24008-24027 | None:intergenic | 30.0% | |
ATTGTCTCTATTTATGTTCC+TGG | + | tig0032533:24108-24127 | Msa1449350:intron | 30.0% | |
AATCGACAGAAATACACAAA+TGG | - | tig0032533:24169-24188 | None:intergenic | 30.0% | |
TCATATGCTCAACTTTCATT+TGG | + | tig0032533:24230-24249 | Msa1449350:intron | 30.0% | |
!!! | ATTTGGCATAGTTTTATCCT+TGG | + | tig0032533:24247-24266 | Msa1449350:intron | 30.0% |
!!! | TTTGGCATAGTTTTATCCTT+GGG | + | tig0032533:24248-24267 | Msa1449350:intron | 30.0% |
GAGAATTGTTTCAATGTACT+TGG | + | tig0032533:24417-24436 | Msa1449350:intron | 30.0% | |
GAATTGTTTCAATGTACTTG+GGG | + | tig0032533:24419-24438 | Msa1449350:intron | 30.0% | |
TTACTCACTAGAGCAAATAT+GGG | - | tig0032533:24482-24501 | None:intergenic | 30.0% | |
TTTACTCACTAGAGCAAATA+TGG | - | tig0032533:24483-24502 | None:intergenic | 30.0% | |
AATAGATGTACACACAAAAC+GGG | - | tig0032533:24593-24612 | None:intergenic | 30.0% | |
CAATAGATGTACACACAAAA+CGG | - | tig0032533:24594-24613 | None:intergenic | 30.0% | |
!!! | CTAGTTCGCTTTTTAATTTG+TGG | + | tig0032533:24646-24665 | Msa1449350:intron | 30.0% |
CAAGAGAAAAATCAACTCTT+GGG | - | tig0032533:25746-25765 | None:intergenic | 30.0% | |
ACAAGAGAAAAATCAACTCT+TGG | - | tig0032533:25747-25766 | None:intergenic | 30.0% | |
!! | AGTTGATTTTTCTCTTGTGA+TGG | + | tig0032533:25749-25768 | Msa1449350:exon | 30.0% |
TTCTCTTGTGATGGTTATTA+TGG | + | tig0032533:25758-25777 | Msa1449350:three_prime_UTR | 30.0% | |
ATCGATGTTGCTATCAAAAT+GGG | - | tig0032533:25815-25834 | None:intergenic | 30.0% | |
TATCGATGTTGCTATCAAAA+TGG | - | tig0032533:25816-25835 | None:intergenic | 30.0% | |
!! | TTTTGATAGCAACATCGATA+TGG | + | tig0032533:25816-25835 | Msa1449350:three_prime_UTR | 30.0% |
AGAGGAAGAAAGTGAAAACA+CGG | - | tig0032533:21739-21758 | None:intergenic | 35.0% | |
TTCACTTTCTTCCTCTCTAT+AGG | + | tig0032533:21743-21762 | Msa1449350:five_prime_UTR | 35.0% | |
TCACTTTCTTCCTCTCTATA+GGG | + | tig0032533:21744-21763 | Msa1449350:five_prime_UTR | 35.0% | |
TTGAAACAAACCCTATAGAG+AGG | - | tig0032533:21757-21776 | None:intergenic | 35.0% | |
! | CTCTATAGGGTTTGTTTCAA+TGG | + | tig0032533:21757-21776 | Msa1449350:exon | 35.0% |
! | TATAGGGTTTGTTTCAATGG+CGG | + | tig0032533:21760-21779 | Msa1449350:exon | 35.0% |
! | TTCATCGTACTTGCGTTTTA+GGG | - | tig0032533:21804-21823 | None:intergenic | 35.0% |
! | GTTGGTGTTCTTATTGGTAA+AGG | + | tig0032533:22064-22083 | Msa1449350:CDS | 35.0% |
AAGTATCTTCAGATGCAATC+TGG | + | tig0032533:22100-22119 | Msa1449350:CDS | 35.0% | |
! | GATTCAAGTTACTCGTGATA+TGG | + | tig0032533:22129-22148 | Msa1449350:CDS | 35.0% |
ACTAGGATGGTTGAACTTAT+GGG | + | tig0032533:22172-22191 | Msa1449350:CDS | 35.0% | |
CTGTTGTATGGAGTTTCAAT+AGG | + | tig0032533:22494-22513 | Msa1449350:intron | 35.0% | |
CAGTCAGATACAACAAAATC+AGG | - | tig0032533:22597-22616 | None:intergenic | 35.0% | |
TGATGTTTCAATGACGGTAA+AGG | + | tig0032533:22664-22683 | Msa1449350:intron | 35.0% | |
ATGACTGTAACTTTACCTCT+TGG | + | tig0032533:22812-22831 | Msa1449350:intron | 35.0% | |
TTAGTGAATGTTTCACCAAG+AGG | - | tig0032533:22830-22849 | None:intergenic | 35.0% | |
AAAACACCTCTTATCAGTGA+TGG | - | tig0032533:23025-23044 | None:intergenic | 35.0% | |
TGCTCAAATGATGTTGGAAT+TGG | + | tig0032533:23090-23109 | Msa1449350:intron | 35.0% | |
TTTATTAACTAGGCTGAAGC+TGG | + | tig0032533:23155-23174 | Msa1449350:intron | 35.0% | |
TTATTAACTAGGCTGAAGCT+GGG | + | tig0032533:23156-23175 | Msa1449350:intron | 35.0% | |
ATACCAAACAATAAGGTGTG+GGG | + | tig0032533:23242-23261 | Msa1449350:intron | 35.0% | |
GATGAAATATATCCAGTTGC+AGG | + | tig0032533:23264-23283 | Msa1449350:intron | 35.0% | |
GGTTTCTTGTGTACATCTTT+AGG | + | tig0032533:23332-23351 | Msa1449350:intron | 35.0% | |
TCTTGTGTACATCTTTAGGT+TGG | + | tig0032533:23336-23355 | Msa1449350:intron | 35.0% | |
!! | CTTTAGGTTGGCCTTATAAT+TGG | + | tig0032533:23348-23367 | Msa1449350:intron | 35.0% |
!! | GTTGGCCTTATAATTGGTAA+AGG | + | tig0032533:23354-23373 | Msa1449350:CDS | 35.0% |
CTCCTCCTTTACCAATTATA+AGG | - | tig0032533:23362-23381 | None:intergenic | 35.0% | |
AATATGAAATCCATGTCGTC+GGG | - | tig0032533:23534-23553 | None:intergenic | 35.0% | |
GAATATGAAATCCATGTCGT+CGG | - | tig0032533:23535-23554 | None:intergenic | 35.0% | |
TTTCTGTTGATGTATCACCT+GGG | - | tig0032533:23614-23633 | None:intergenic | 35.0% | |
!! | TGCTGATTCAATTTGATCAG+GGG | - | tig0032533:23658-23677 | None:intergenic | 35.0% |
TTGGTTAATCAAATCCTCAC+TGG | + | tig0032533:23684-23703 | Msa1449350:CDS | 35.0% | |
!! | ATCTGGCTTATCATTTTTGG+AGG | + | tig0032533:23739-23758 | Msa1449350:intron | 35.0% |
!! | TCTGGCTTATCATTTTTGGA+GGG | + | tig0032533:23740-23759 | Msa1449350:intron | 35.0% |
! | CTGCGCCTTTTGTAAAAATA+AGG | + | tig0032533:23915-23934 | Msa1449350:intron | 35.0% |
!! | GTGCTCATATTTTTACAGTG+TGG | + | tig0032533:23937-23956 | Msa1449350:intron | 35.0% |
GAAACCATGATAACTCAAAC+TGG | + | tig0032533:23979-23998 | Msa1449350:intron | 35.0% | |
TCAAACAAAATCTAACAGCC+AGG | - | tig0032533:24129-24148 | None:intergenic | 35.0% | |
TGATGTACGGTCTGTATAAT+TGG | + | tig0032533:24447-24466 | Msa1449350:intron | 35.0% | |
AGAATCGTCTCAGAAATTCA+GGG | + | tig0032533:24688-24707 | Msa1449350:intron | 35.0% | |
TGTTGCTGATCATATGTTTG+TGG | - | tig0032533:25149-25168 | None:intergenic | 35.0% | |
CAAACATATGATCAGCAACA+AGG | + | tig0032533:25149-25168 | Msa1449350:CDS | 35.0% | |
TATGATCAGCAACAAGGTTA+TGG | + | tig0032533:25155-25174 | Msa1449350:CDS | 35.0% | |
TGATGGTTATTATGGTCCTT+CGG | + | tig0032533:25766-25785 | Msa1449350:three_prime_UTR | 35.0% | |
! | GTACTTGAATATTTTCCGGA+AGG | + | tig0032533:25874-25893 | Msa1449350:three_prime_UTR | 35.0% |
! | TATTTTCCGGAAGGTTGAAT+AGG | + | tig0032533:25883-25902 | Msa1449350:three_prime_UTR | 35.0% |
! | GAAAAATGCTAGTCTAACAC+TGG | - | tig0032533:25930-25949 | None:intergenic | 35.0% |
! | TCCATGTCATTTGCAGAATT+TGG | + | tig0032533:26039-26058 | Msa1449350:three_prime_UTR | 35.0% |
ACCAAATTCTGCAAATGACA+TGG | - | tig0032533:26043-26062 | None:intergenic | 35.0% | |
!! | GGTGTTACTAAAATGAACAC+AGG | + | tig0032533:26087-26106 | Msa1449350:three_prime_UTR | 35.0% |
AGAAAGTGAAAACACGGTGT+GGG | - | tig0032533:21733-21752 | None:intergenic | 40.0% | |
AAGAAAGTGAAAACACGGTG+TGG | - | tig0032533:21734-21753 | None:intergenic | 40.0% | |
! | GTTCATCGTACTTGCGTTTT+AGG | - | tig0032533:21805-21824 | None:intergenic | 40.0% |
AACTTCTTGAGCTCGTTGTT+TGG | - | tig0032533:21867-21886 | None:intergenic | 40.0% | |
! | TTATCGGACTTGGTTCGTTT+GGG | - | tig0032533:21938-21957 | None:intergenic | 40.0% |
AAACGAACCAAGTCCGATAA+CGG | + | tig0032533:21938-21957 | Msa1449350:CDS | 40.0% | |
TAAGAATCAAACCCCGATTG+TGG | - | tig0032533:21968-21987 | None:intergenic | 40.0% | |
GAAATACCTAATGGTAGGGT+TGG | + | tig0032533:22046-22065 | Msa1449350:CDS | 40.0% | |
GGTGTTCTTATTGGTAAAGG+AGG | + | tig0032533:22067-22086 | Msa1449350:CDS | 40.0% | |
CTGATCCTAATTCTCAGACT+AGG | + | tig0032533:22155-22174 | Msa1449350:CDS | 40.0% | |
TCCTAATTCTCAGACTAGGA+TGG | + | tig0032533:22159-22178 | Msa1449350:CDS | 40.0% | |
ACCATCCTAGTCTGAGAATT+AGG | - | tig0032533:22163-22182 | None:intergenic | 40.0% | |
GACTAGGATGGTTGAACTTA+TGG | + | tig0032533:22171-22190 | Msa1449350:CDS | 40.0% | |
TATTAACTAGGCTGAAGCTG+GGG | + | tig0032533:23157-23176 | Msa1449350:intron | 40.0% | |
!! | TATTCTCGTTTGGGTTGATG+TGG | + | tig0032533:23311-23330 | Msa1449350:intron | 40.0% |
! | GGCCTTATAATTGGTAAAGG+AGG | + | tig0032533:23357-23376 | Msa1449350:CDS | 40.0% |
! | AAGAGTATGCAAGCTTCTAC+CGG | + | tig0032533:23390-23409 | Msa1449350:CDS | 40.0% |
TTCTGTTGATGTATCACCTG+GGG | - | tig0032533:23613-23632 | None:intergenic | 40.0% | |
CTTTCTGTTGATGTATCACC+TGG | - | tig0032533:23615-23634 | None:intergenic | 40.0% | |
TAATCAAATCCTCACTGGTG+AGG | + | tig0032533:23689-23708 | Msa1449350:CDS | 40.0% | |
! | GTCTCCAGTTTGAGTTATCA+TGG | - | tig0032533:23986-24005 | None:intergenic | 40.0% |
CAGAATCGTCTCAGAAATTC+AGG | + | tig0032533:24687-24706 | Msa1449350:intron | 40.0% | |
AACAAGCTGGTTATGGCTAT+GGG | + | tig0032533:24787-24806 | Msa1449350:CDS | 40.0% | |
GGTTATGGTCAAGAAAGCTA+TGG | + | tig0032533:25083-25102 | Msa1449350:CDS | 40.0% | |
AATGCGCAACAACAACAATC+TGG | + | tig0032533:25113-25132 | Msa1449350:CDS | 40.0% | |
ATGCGCAACAACAACAATCT+GGG | + | tig0032533:25114-25133 | Msa1449350:CDS | 40.0% | |
CAACAACAACAATCTGGGTA+TGG | + | tig0032533:25119-25138 | Msa1449350:CDS | 40.0% | |
ATCTGCTTGTGATCCATAGT+TGG | - | tig0032533:25234-25253 | None:intergenic | 40.0% | |
!! | TTTGCACTTGGCTTTTGAGA+GGG | - | tig0032533:25413-25432 | None:intergenic | 40.0% |
!! | ATTTGCACTTGGCTTTTGAG+AGG | - | tig0032533:25414-25433 | None:intergenic | 40.0% |
! | TAAACAGGTGGATTTGCACT+TGG | - | tig0032533:25425-25444 | None:intergenic | 40.0% |
AGTGCAAATCCACCTGTTTA+TGG | + | tig0032533:25425-25444 | Msa1449350:CDS | 40.0% | |
TGTGATTGACCATAAACAGG+TGG | - | tig0032533:25437-25456 | None:intergenic | 40.0% | |
GACTGTGATTGACCATAAAC+AGG | - | tig0032533:25440-25459 | None:intergenic | 40.0% | |
GAACTATTTCCATATGACGG+CGG | - | tig0032533:25632-25651 | None:intergenic | 40.0% | |
GGAAATAGTTCTTATGGTGC+TGG | + | tig0032533:25641-25660 | Msa1449350:CDS | 40.0% | |
!! | TTATGGTGCTGGTTATGTTC+AGG | + | tig0032533:25652-25671 | Msa1449350:CDS | 40.0% |
GATGGTTATTATGGTCCTTC+GGG | + | tig0032533:25767-25786 | Msa1449350:three_prime_UTR | 40.0% | |
AAATTAAAGCCACATCCCGA+AGG | - | tig0032533:25785-25804 | None:intergenic | 40.0% | |
GATGTTGCTATCAAAATGGG+AGG | - | tig0032533:25812-25831 | None:intergenic | 40.0% | |
TTAGCTCCTATTCAACCTTC+CGG | - | tig0032533:25892-25911 | None:intergenic | 40.0% | |
!! | TGCAGAATTTGGTGCAATTG+TGG | + | tig0032533:26050-26069 | Msa1449350:three_prime_UTR | 40.0% |
GTGTGGGAAGGAATTGGATT+AGG | - | tig0032533:21717-21736 | None:intergenic | 45.0% | |
! | GTTATCGGACTTGGTTCGTT+TGG | - | tig0032533:21939-21958 | None:intergenic | 45.0% |
AGAACACCAACCCTACCATT+AGG | - | tig0032533:22055-22074 | None:intergenic | 45.0% | |
!! | GGTAGGGTTGGTGTTCTTAT+TGG | + | tig0032533:22058-22077 | Msa1449350:CDS | 45.0% |
CATCAATGAAGTCCTTGCTG+AGG | + | tig0032533:22228-22247 | Msa1449350:CDS | 45.0% | |
GTGCAACCATCACTGATAAG+AGG | + | tig0032533:23016-23035 | Msa1449350:intron | 45.0% | |
CATCCCCACACCTTATTGTT+TGG | - | tig0032533:23248-23267 | None:intergenic | 45.0% | |
CCAAAAAACATGCCTGCAAC+TGG | - | tig0032533:23279-23298 | None:intergenic | 45.0% | |
!!! | CCAGTTGCAGGCATGTTTTT+TGG | + | tig0032533:23276-23295 | Msa1449350:intron | 45.0% |
TCTGTTGATGTATCACCTGG+GGG | - | tig0032533:23612-23631 | None:intergenic | 45.0% | |
GATAACATACCTCACCAGTG+AGG | - | tig0032533:23701-23720 | None:intergenic | 45.0% | |
TTGAGGCTGACCTGTTAGAT+TGG | + | tig0032533:24378-24397 | Msa1449350:intron | 45.0% | |
TGAGGCTGACCTGTTAGATT+GGG | + | tig0032533:24379-24398 | Msa1449350:intron | 45.0% | |
! | TGACCTGTTAGATTGGGTTG+AGG | + | tig0032533:24385-24404 | Msa1449350:intron | 45.0% |
!! | GACCTGTTAGATTGGGTTGA+GGG | + | tig0032533:24386-24405 | Msa1449350:intron | 45.0% |
TTCCCTCAACCCAATCTAAC+AGG | - | tig0032533:24391-24410 | None:intergenic | 45.0% | |
!! | TGTTAGATTGGGTTGAGGGA+AGG | + | tig0032533:24390-24409 | Msa1449350:intron | 45.0% |
ACTTGGGGCTTAGTGATGTA+CGG | + | tig0032533:24434-24453 | Msa1449350:intron | 45.0% | |
TATTGGCATCAACGGGAATG+AGG | + | tig0032533:24550-24569 | Msa1449350:intron | 45.0% | |
CTCAGAAATTCAGGGAACTC+AGG | + | tig0032533:24696-24715 | Msa1449350:CDS | 45.0% | |
AGAAATTCAGGGAACTCAGG+TGG | + | tig0032533:24699-24718 | Msa1449350:CDS | 45.0% | |
CAACAAGCTGGTTATGGCTA+TGG | + | tig0032533:24786-24805 | Msa1449350:CDS | 45.0% | |
TTACTCCCACTGCCATAACT+GGG | - | tig0032533:25188-25207 | None:intergenic | 45.0% | |
ATTACTCCCACTGCCATAAC+TGG | - | tig0032533:25189-25208 | None:intergenic | 45.0% | |
GGAGTAATCCAACCCAAGAA+GGG | + | tig0032533:25201-25220 | Msa1449350:CDS | 45.0% | |
!! | AGTAGTGGGTTGGGAAGTTT+GGG | - | tig0032533:25261-25280 | None:intergenic | 45.0% |
TTGAGGAGTTCCTTGTTGGT+TGG | - | tig0032533:25306-25325 | None:intergenic | 45.0% | |
! | AGACTGTGGTTGACTTCCAT+AGG | - | tig0032533:25363-25382 | None:intergenic | 45.0% |
TATGGAAGTCAACCACAGTC+TGG | + | tig0032533:25362-25381 | Msa1449350:CDS | 45.0% | |
AGTCAACCACAGTCTGGTTA+TGG | + | tig0032533:25368-25387 | Msa1449350:CDS | 45.0% | |
TCTGGTTATGGACCTAGCTA+TGG | + | tig0032533:25380-25399 | Msa1449350:CDS | 45.0% | |
TATTATGGTCCTTCGGGATG+TGG | + | tig0032533:25773-25792 | Msa1449350:three_prime_UTR | 45.0% | |
!!! | TTTTTTAAGTTTAAAATTAT+GGG | + | tig0032533:23776-23795 | Msa1449350:intron | 5.0% |
AACACGGTGTGGGAAGGAAT+TGG | - | tig0032533:21723-21742 | None:intergenic | 50.0% | |
AGTGAAAACACGGTGTGGGA+AGG | - | tig0032533:21729-21748 | None:intergenic | 50.0% | |
! | CTTGGTTCGTTTGGGATCGT+AGG | - | tig0032533:21930-21949 | None:intergenic | 50.0% |
!! | CGATTGTGGAGCACCGTTAT+CGG | - | tig0032533:21954-21973 | None:intergenic | 50.0% |
! | CGATAACGGTGCTCCACAAT+CGG | + | tig0032533:21952-21971 | Msa1449350:CDS | 50.0% |
! | GATAACGGTGCTCCACAATC+GGG | + | tig0032533:21953-21972 | Msa1449350:CDS | 50.0% |
ATAACGGTGCTCCACAATCG+GGG | + | tig0032533:21954-21973 | Msa1449350:CDS | 50.0% | |
TCGCAGCAAGGTGGTAGTTA+TGG | + | tig0032533:22007-22026 | Msa1449350:CDS | 50.0% | |
TCAGCAGAAGAAACAGCGTC+AGG | - | tig0032533:22202-22221 | None:intergenic | 50.0% | |
AGACGGATGGTTGCACAATC+TGG | + | tig0032533:23197-23216 | Msa1449350:CDS | 50.0% | |
GACGGATGGTTGCACAATCT+GGG | + | tig0032533:23198-23217 | Msa1449350:CDS | 50.0% | |
ACGGATGGTTGCACAATCTG+GGG | + | tig0032533:23199-23218 | Msa1449350:CDS | 50.0% | |
TTCTACCGGAGCACGAATTC+AGG | + | tig0032533:23404-23423 | Msa1449350:CDS | 50.0% | |
GAGAACCTGAATTCGTGCTC+CGG | - | tig0032533:23412-23431 | None:intergenic | 50.0% | |
TCAGGTGGCTATACTCAGCA+AGG | + | tig0032533:24714-24733 | Msa1449350:CDS | 50.0% | |
!! | CCATAACCAGCTTGTTGCAC+AGG | - | tig0032533:24783-24802 | None:intergenic | 50.0% |
CCTGTGCAACAAGCTGGTTA+TGG | + | tig0032533:24780-24799 | Msa1449350:CDS | 50.0% | |
GATGGACCAGAGTATGATCC+AGG | - | tig0032533:24816-24835 | None:intergenic | 50.0% | |
GGCATGTTATACTGCGGTGA+TGG | - | tig0032533:24834-24853 | None:intergenic | 50.0% | |
GGCTGAGGCATGTTATACTG+CGG | - | tig0032533:24840-24859 | None:intergenic | 50.0% | |
TGAGGAGGATAGCCTGCATA+TGG | - | tig0032533:24864-24883 | None:intergenic | 50.0% | |
!! | CAGTTGGTGGAATATCCACC+GGG | - | tig0032533:24891-24910 | None:intergenic | 50.0% |
!! | CCAGTTGGTGGAATATCCAC+CGG | - | tig0032533:24892-24911 | None:intergenic | 50.0% |
CGGTGGATATTCCACCAACT+GGG | + | tig0032533:24890-24909 | Msa1449350:CDS | 50.0% | |
TGAGTAGACTGCTGGTGAGA+TGG | - | tig0032533:24930-24949 | None:intergenic | 50.0% | |
!! | TTTGCTGTTGCTGGGGTTGT+TGG | - | tig0032533:24977-24996 | None:intergenic | 50.0% |
!!! | CCAGGATTTTGCTGTTGCTG+GGG | - | tig0032533:24984-25003 | None:intergenic | 50.0% |
!!! | CCCAGGATTTTGCTGTTGCT+GGG | - | tig0032533:24985-25004 | None:intergenic | 50.0% |
CCCAGCAACAGCAAAATCCT+GGG | + | tig0032533:24982-25001 | Msa1449350:CDS | 50.0% | |
CCAGCAACAGCAAAATCCTG+GGG | + | tig0032533:24983-25002 | Msa1449350:CDS | 50.0% | |
CAGCAACAGCAAAATCCTGG+GGG | + | tig0032533:24984-25003 | Msa1449350:CDS | 50.0% | |
TACAGTCAACCTCCTTCCTC+TGG | + | tig0032533:25041-25060 | Msa1449350:CDS | 50.0% | |
TGGCTATAACCAGAGGAAGG+AGG | - | tig0032533:25053-25072 | None:intergenic | 50.0% | |
! | GGTTGGCTATAACCAGAGGA+AGG | - | tig0032533:25056-25075 | None:intergenic | 50.0% |
TCCTCTGGTTATAGCCAACC+AGG | + | tig0032533:25056-25075 | Msa1449350:CDS | 50.0% | |
! | TCCTGGTTGGCTATAACCAG+AGG | - | tig0032533:25060-25079 | None:intergenic | 50.0% |
TGGTTATAGCCAACCAGGAC+AGG | + | tig0032533:25061-25080 | Msa1449350:CDS | 50.0% | |
GGTTATAGCCAACCAGGACA+GGG | + | tig0032533:25062-25081 | Msa1449350:CDS | 50.0% | |
TCTTGACCATAACCCTGTCC+TGG | - | tig0032533:25077-25096 | None:intergenic | 50.0% | |
! | TATGGCTCTGCTCCCAGTTA+TGG | + | tig0032533:25173-25192 | Msa1449350:CDS | 50.0% |
GGGAGTAATCCAACCCAAGA+AGG | + | tig0032533:25200-25219 | Msa1449350:CDS | 50.0% | |
!! | TAGTGGGTTGGGAAGTTTGG+GGG | - | tig0032533:25259-25278 | None:intergenic | 50.0% |
!! | GTAGTGGGTTGGGAAGTTTG+GGG | - | tig0032533:25260-25279 | None:intergenic | 50.0% |
!! | CAGTAGTGGGTTGGGAAGTT+TGG | - | tig0032533:25262-25281 | None:intergenic | 50.0% |
!! | GTTGGTAGCATAGCCTTGCT+GGG | - | tig0032533:25288-25307 | None:intergenic | 50.0% |
GGCTATGCTACCAACCAACA+AGG | + | tig0032533:25293-25312 | Msa1449350:CDS | 50.0% | |
CTGGTTGAGGAGTTCCTTGT+TGG | - | tig0032533:25310-25329 | None:intergenic | 50.0% | |
CAACAAGGAACTCCTCAACC+AGG | + | tig0032533:25308-25327 | Msa1449350:CDS | 50.0% | |
GCTACTGCATAACCTGGTTG+AGG | - | tig0032533:25323-25342 | None:intergenic | 50.0% | |
TTGACTTCCATAGGCCGCTT+GGG | - | tig0032533:25354-25373 | None:intergenic | 50.0% | |
CTAGGTCCATAACCAGACTG+TGG | - | tig0032533:25377-25396 | None:intergenic | 50.0% | |
TAACTCTGGCTGAGCATACC+CGG | - | tig0032533:25522-25541 | None:intergenic | 50.0% | |
TATGATTGCGGACCATACCC+TGG | - | tig0032533:25569-25588 | None:intergenic | 50.0% | |
GGGTATGGTCCGCAATCATA+CGG | + | tig0032533:25569-25588 | Msa1449350:CDS | 50.0% | |
!! | TGAGGAGCACCGTATGATTG+CGG | - | tig0032533:25581-25600 | None:intergenic | 50.0% |
CAATCATACGGTGCTCCTCA+AGG | + | tig0032533:25581-25600 | Msa1449350:CDS | 50.0% | |
! | TTCGAGTTCGATGTCCGTGG+CGG | - | tig0032533:21834-21853 | None:intergenic | 55.0% |
! | GACTTCGAGTTCGATGTCCG+TGG | - | tig0032533:21837-21856 | None:intergenic | 55.0% |
TTGGGATCGTAGGAGAGTGG+TGG | - | tig0032533:21920-21939 | None:intergenic | 55.0% | |
! | CGTTTGGGATCGTAGGAGAG+TGG | - | tig0032533:21923-21942 | None:intergenic | 55.0% |
!! | TGGAGCACCGTTATCGGACT+TGG | - | tig0032533:21948-21967 | None:intergenic | 55.0% |
AAGCCGCAATACTCGCAGCA+AGG | + | tig0032533:21995-22014 | Msa1449350:CDS | 55.0% | |
! | CCACCTTGCTGCGAGTATTG+CGG | - | tig0032533:22001-22020 | None:intergenic | 55.0% |
CGGATGGTTGCACAATCTGG+GGG | + | tig0032533:23200-23219 | Msa1449350:CDS | 55.0% | |
ATACCTTTGCATCCTCCCCC+AGG | + | tig0032533:23594-23613 | Msa1449350:CDS | 55.0% | |
GTTGATGTATCACCTGGGGG+AGG | - | tig0032533:23609-23628 | None:intergenic | 55.0% | |
GTAGATGAGCGCAAGTCCCA+AGG | - | tig0032533:24267-24286 | None:intergenic | 55.0% | |
GGTTATGGCTATGGGCAACC+TGG | + | tig0032533:24795-24814 | Msa1449350:CDS | 55.0% | |
GGGCAACCTGGATCATACTC+TGG | + | tig0032533:24807-24826 | Msa1449350:CDS | 55.0% | |
ATGCCTCAGCCACCATATGC+AGG | + | tig0032533:24849-24868 | Msa1449350:CDS | 55.0% | |
TAGCCTGCATATGGTGGCTG+AGG | - | tig0032533:24855-24874 | None:intergenic | 55.0% | |
GGAGGATAGCCTGCATATGG+TGG | - | tig0032533:24861-24880 | None:intergenic | 55.0% | |
GAATATCCACCGGGTTGCTG+AGG | - | tig0032533:24882-24901 | None:intergenic | 55.0% | |
CCGGTGGATATTCCACCAAC+TGG | + | tig0032533:24889-24908 | Msa1449350:CDS | 55.0% | |
!! | AGTGGATTGGTCCCAGTTGG+TGG | - | tig0032533:24904-24923 | None:intergenic | 55.0% |
!! | TGCAGTGGATTGGTCCCAGT+TGG | - | tig0032533:24907-24926 | None:intergenic | 55.0% |
GGTGAGATGGTGCAGTGGAT+TGG | - | tig0032533:24917-24936 | None:intergenic | 55.0% | |
CACCAGCAGTCTACTCATGC+AGG | + | tig0032533:24933-24952 | Msa1449350:CDS | 55.0% | |
CACCTGCATGAGTAGACTGC+TGG | - | tig0032533:24938-24957 | None:intergenic | 55.0% | |
CAGCAGTCTACTCATGCAGG+TGG | + | tig0032533:24936-24955 | Msa1449350:CDS | 55.0% | |
CCCCAGCAACAGCAAAATCC+TGG | + | tig0032533:24981-25000 | Msa1449350:CDS | 55.0% | |
!!! | CCCCAGGATTTTGCTGTTGC+TGG | - | tig0032533:24986-25005 | None:intergenic | 55.0% |
GTCCTTCACAGCCAGCTGAT+GGG | + | tig0032533:25006-25025 | Msa1449350:CDS | 55.0% | |
CTGTATGCAGACCCATCAGC+TGG | - | tig0032533:25020-25039 | None:intergenic | 55.0% | |
AGCCAACCAGGACAGGGTTA+TGG | + | tig0032533:25068-25087 | Msa1449350:CDS | 55.0% | |
GACCATAACCCTGTCCTGGT+TGG | - | tig0032533:25073-25092 | None:intergenic | 55.0% | |
TCTGCTCCCAGTTATGGCAG+TGG | + | tig0032533:25179-25198 | Msa1449350:CDS | 55.0% | |
CTGCTCCCAGTTATGGCAGT+GGG | + | tig0032533:25180-25199 | Msa1449350:CDS | 55.0% | |
! | GTTGGAAGCGTGCCCTTCTT+GGG | - | tig0032533:25216-25235 | None:intergenic | 55.0% |
! | AGTTGGAAGCGTGCCCTTCT+TGG | - | tig0032533:25217-25236 | None:intergenic | 55.0% |
! | GAAGGGCACGCTTCCAACTA+TGG | + | tig0032533:25218-25237 | Msa1449350:CDS | 55.0% |
!! | AGTGGGTTGGGAAGTTTGGG+GGG | - | tig0032533:25258-25277 | None:intergenic | 55.0% |
!! | CTGGGCAACAGTAGTGGGTT+GGG | - | tig0032533:25270-25289 | None:intergenic | 55.0% |
CCTTGCTGGGCAACAGTAGT+GGG | - | tig0032533:25275-25294 | None:intergenic | 55.0% | |
!! | GGTTGGTAGCATAGCCTTGC+TGG | - | tig0032533:25289-25308 | None:intergenic | 55.0% |
GTAGGGGCTACTGCATAACC+TGG | - | tig0032533:25329-25348 | None:intergenic | 55.0% | |
! | GTTGACTTCCATAGGCCGCT+TGG | - | tig0032533:25355-25374 | None:intergenic | 55.0% |
!! | GCACTTGGCTTTTGAGAGGG+AGG | - | tig0032533:25410-25429 | None:intergenic | 55.0% |
TCACAGTCACCTAGCACAGC+AGG | + | tig0032533:25452-25471 | Msa1449350:CDS | 55.0% | |
GGGTATGCTCAGCCAGAGTT+AGG | + | tig0032533:25521-25540 | Msa1449350:CDS | 55.0% | |
GCTCTCTGAGTGCCTAACTC+TGG | - | tig0032533:25536-25555 | None:intergenic | 55.0% | |
!! | AGAGAGCACCAGTGCAACCA+GGG | + | tig0032533:25549-25568 | Msa1449350:CDS | 55.0% |
TCATACGGTGCTCCTCAAGG+TGG | + | tig0032533:25584-25603 | Msa1449350:CDS | 55.0% | |
TTCCATATGACGGCGGAGTC+TGG | - | tig0032533:25625-25644 | None:intergenic | 55.0% | |
TAGCGATGGAGCAACTGCAC+AGG | + | tig0032533:25688-25707 | Msa1449350:CDS | 55.0% | |
AACTGCACAGGCTGTTCCAC+AGG | + | tig0032533:25700-25719 | Msa1449350:CDS | 55.0% | |
ACTGCACAGGCTGTTCCACA+GGG | + | tig0032533:25701-25720 | Msa1449350:CDS | 55.0% | |
ACTTTAGCAACACCGCCCTG+TGG | - | tig0032533:25719-25738 | None:intergenic | 55.0% | |
GGAACTTCGCCGCTCATTTC+AGG | - | tig0032533:26022-26041 | None:intergenic | 55.0% | |
CGATGAACAACCCACCGCCA+CGG | + | tig0032533:21817-21836 | Msa1449350:CDS | 60.0% | |
AGTTCGATGTCCGTGGCGGT+GGG | - | tig0032533:21830-21849 | None:intergenic | 60.0% | |
GGTGACGCTGAGAAGACGAG+CGG | - | tig0032533:21891-21910 | None:intergenic | 60.0% | |
GCTCGTCTTCTCAGCGTCAC+CGG | + | tig0032533:21890-21909 | Msa1449350:CDS | 60.0% | |
CCGCAATACTCGCAGCAAGG+TGG | + | tig0032533:21998-22017 | Msa1449350:CDS | 60.0% | |
TAGGCTGAAGCTGGGGCTTC+TGG | + | tig0032533:23164-23183 | Msa1449350:intron | 60.0% | |
CTTCTGGCGGTGGCACTAGA+CGG | + | tig0032533:23180-23199 | Msa1449350:CDS | 60.0% | |
TCACCTGGGGGAGGATGCAA+AGG | - | tig0032533:23600-23619 | None:intergenic | 60.0% | |
AGCTAGACGGTGGTCGGGAT+TGG | - | tig0032533:24743-24762 | None:intergenic | 60.0% | |
AATCCCGACCACCGTCTAGC+TGG | + | tig0032533:24742-24761 | Msa1449350:CDS | 60.0% | |
ATCCCGACCACCGTCTAGCT+GGG | + | tig0032533:24743-24762 | Msa1449350:CDS | 60.0% | |
TGTTGCACAGGAGCAGCAGG+AGG | - | tig0032533:24771-24790 | None:intergenic | 60.0% | |
! | GCTTGTTGCACAGGAGCAGC+AGG | - | tig0032533:24774-24793 | None:intergenic | 60.0% |
GCTGCTCCTGTGCAACAAGC+TGG | + | tig0032533:24774-24793 | Msa1449350:CDS | 60.0% | |
GGCTATCCTCCTCAGCAACC+CGG | + | tig0032533:24870-24889 | Msa1449350:CDS | 60.0% | |
TATCCTCCTCAGCAACCCGG+TGG | + | tig0032533:24873-24892 | Msa1449350:CDS | 60.0% | |
TATCCACCGGGTTGCTGAGG+AGG | - | tig0032533:24879-24898 | None:intergenic | 60.0% | |
CTGCTGGTGAGATGGTGCAG+TGG | - | tig0032533:24922-24941 | None:intergenic | 60.0% | |
GGTCCTTCACAGCCAGCTGA+TGG | + | tig0032533:25005-25024 | Msa1449350:CDS | 60.0% | |
GACCCATCAGCTGGCTGTGA+AGG | - | tig0032533:25011-25030 | None:intergenic | 60.0% | |
GAAGCGTGCCCTTCTTGGGT+TGG | - | tig0032533:25212-25231 | None:intergenic | 60.0% | |
!! | GCTGGGCAACAGTAGTGGGT+TGG | - | tig0032533:25271-25290 | None:intergenic | 60.0% |
CCCACTACTGTTGCCCAGCA+AGG | + | tig0032533:25272-25291 | Msa1449350:CDS | 60.0% | |
GCCTTGCTGGGCAACAGTAG+TGG | - | tig0032533:25276-25295 | None:intergenic | 60.0% | |
AGTAGCCCCTACCTCCCAAG+CGG | + | tig0032533:25337-25356 | Msa1449350:CDS | 60.0% | |
ATAGGCCGCTTGGGAGGTAG+GGG | - | tig0032533:25345-25364 | None:intergenic | 60.0% | |
CATAGGCCGCTTGGGAGGTA+GGG | - | tig0032533:25346-25365 | None:intergenic | 60.0% | |
ACTTCCATAGGCCGCTTGGG+AGG | - | tig0032533:25351-25370 | None:intergenic | 60.0% | |
!! | GAGGGAGGAGCACCATAGCT+AGG | - | tig0032533:25395-25414 | None:intergenic | 60.0% |
CAGTCACCTAGCACAGCAGG+AGG | + | tig0032533:25455-25474 | Msa1449350:CDS | 60.0% | |
CCATAGCCTCCTGCTGTGCT+AGG | - | tig0032533:25464-25483 | None:intergenic | 60.0% | |
CCTAGCACAGCAGGAGGCTA+TGG | + | tig0032533:25461-25480 | Msa1449350:CDS | 60.0% | |
TCTGGCTGAGCATACCCGGA+AGG | - | tig0032533:25518-25537 | None:intergenic | 60.0% | |
!! | CAGAGAGCACCAGTGCAACC+AGG | + | tig0032533:25548-25567 | Msa1449350:CDS | 60.0% |
GCACCAGTGCAACCAGGGTA+TGG | + | tig0032533:25554-25573 | Msa1449350:CDS | 60.0% | |
GGACCATACCCTGGTTGCAC+TGG | - | tig0032533:25560-25579 | None:intergenic | 60.0% | |
GCTCCAGCGTATGCTAGCGA+TGG | + | tig0032533:25674-25693 | Msa1449350:CDS | 60.0% | |
GCTCCATCGCTAGCATACGC+TGG | - | tig0032533:25680-25699 | None:intergenic | 60.0% | |
GAGTTCGATGTCCGTGGCGG+TGG | - | tig0032533:21831-21850 | None:intergenic | 65.0% | |
! | GTAGGAGAGTGGTGGAGCGC+CGG | - | tig0032533:21912-21931 | None:intergenic | 65.0% |
GCTGAAGCTGGGGCTTCTGG+CGG | + | tig0032533:23167-23186 | Msa1449350:CDS | 65.0% | |
TGGCGGTGGCACTAGACGGA+TGG | + | tig0032533:23184-23203 | Msa1449350:CDS | 65.0% | |
CAGCTGACTGCCCGACGACA+TGG | + | tig0032533:23521-23540 | Msa1449350:intron | 65.0% | |
AGCCCAGCTAGACGGTGGTC+GGG | - | tig0032533:24748-24767 | None:intergenic | 65.0% | |
GAGCCCAGCTAGACGGTGGT+CGG | - | tig0032533:24749-24768 | None:intergenic | 65.0% | |
GCAGGAGGAGCCCAGCTAGA+CGG | - | tig0032533:24756-24775 | None:intergenic | 65.0% | |
CCATAGGCCGCTTGGGAGGT+AGG | - | tig0032533:25347-25366 | None:intergenic | 65.0% | |
CCTACCTCCCAAGCGGCCTA+TGG | + | tig0032533:25344-25363 | Msa1449350:CDS | 65.0% | |
TGAGCATACCCGGAAGGCGG+GGG | - | tig0032533:25512-25531 | None:intergenic | 65.0% | |
CTGAGCATACCCGGAAGGCG+GGG | - | tig0032533:25513-25532 | None:intergenic | 65.0% | |
GCTGAGCATACCCGGAAGGC+GGG | - | tig0032533:25514-25533 | None:intergenic | 65.0% | |
GGCTGAGCATACCCGGAAGG+CGG | - | tig0032533:25515-25534 | None:intergenic | 65.0% | |
! | TAGCCAGGCTGGCCACCTTG+AGG | - | tig0032533:25599-25618 | None:intergenic | 65.0% |
CAAGGTGGCCAGCCTGGCTA+TGG | + | tig0032533:25599-25618 | Msa1449350:CDS | 65.0% | |
GAGTCTGGCCATAGCCAGGC+TGG | - | tig0032533:25610-25629 | None:intergenic | 65.0% | |
GGCCAGACTCCGCCGTCATA+TGG | + | tig0032533:25620-25639 | Msa1449350:CDS | 65.0% | |
GCACAGGCTGTTCCACAGGG+CGG | + | tig0032533:25704-25723 | Msa1449350:CDS | 65.0% | |
GAAGCTGGGGCTTCTGGCGG+TGG | + | tig0032533:23170-23189 | Msa1449350:CDS | 70.0% | |
GGAGGAGCCCAGCTAGACGG+TGG | - | tig0032533:24753-24772 | None:intergenic | 70.0% | |
GCTGGCTGTGAAGGACCCCC+AGG | - | tig0032533:25002-25021 | None:intergenic | 70.0% | |
!! | GAAGGCGGGGGCTGGCTAGA+GGG | - | tig0032533:25500-25519 | None:intergenic | 70.0% |
TCTAGCCAGCCCCCGCCTTC+CGG | + | tig0032533:25500-25519 | Msa1449350:CDS | 70.0% | |
GCTCCTCAAGGTGGCCAGCC+TGG | + | tig0032533:25593-25612 | Msa1449350:CDS | 70.0% | |
GGCGGAGTCTGGCCATAGCC+AGG | - | tig0032533:25614-25633 | None:intergenic | 70.0% | |
!! | GGAAGGCGGGGGCTGGCTAG+AGG | - | tig0032533:25501-25520 | None:intergenic | 75.0% |
CTAGCCAGCCCCCGCCTTCC+GGG | + | tig0032533:25501-25520 | Msa1449350:CDS | 75.0% | |
CATACCCGGAAGGCGGGGGC+TGG | - | tig0032533:25508-25527 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0032533 | gene | 21687 | 26148 | 21687 | ID=Msa1449350;Name=Msa1449350 |
tig0032533 | mRNA | 21687 | 26148 | 21687 | ID=Msa1449350-mRNA-1;Parent=Msa1449350;Name=Msa1449350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=89|1|1|1|1|1|5|394|606 |
tig0032533 | exon | 21687 | 22249 | 21687 | ID=Msa1449350-mRNA-1:exon:16905;Parent=Msa1449350-mRNA-1 |
tig0032533 | exon | 23167 | 23256 | 23167 | ID=Msa1449350-mRNA-1:exon:16906;Parent=Msa1449350-mRNA-1 |
tig0032533 | exon | 23354 | 23425 | 23354 | ID=Msa1449350-mRNA-1:exon:16907;Parent=Msa1449350-mRNA-1 |
tig0032533 | exon | 23591 | 23710 | 23591 | ID=Msa1449350-mRNA-1:exon:16908;Parent=Msa1449350-mRNA-1 |
tig0032533 | exon | 24690 | 26148 | 24690 | ID=Msa1449350-mRNA-1:exon:16909;Parent=Msa1449350-mRNA-1 |
tig0032533 | five_prime_UTR | 21687 | 21775 | 21687 | ID=Msa1449350-mRNA-1:five_prime_utr;Parent=Msa1449350-mRNA-1 |
tig0032533 | CDS | 21776 | 22249 | 21776 | ID=Msa1449350-mRNA-1:cds;Parent=Msa1449350-mRNA-1 |
tig0032533 | CDS | 23167 | 23256 | 23167 | ID=Msa1449350-mRNA-1:cds;Parent=Msa1449350-mRNA-1 |
tig0032533 | CDS | 23354 | 23425 | 23354 | ID=Msa1449350-mRNA-1:cds;Parent=Msa1449350-mRNA-1 |
tig0032533 | CDS | 23591 | 23710 | 23591 | ID=Msa1449350-mRNA-1:cds;Parent=Msa1449350-mRNA-1 |
tig0032533 | CDS | 24690 | 25754 | 24690 | ID=Msa1449350-mRNA-1:cds;Parent=Msa1449350-mRNA-1 |
tig0032533 | three_prime_UTR | 25755 | 26148 | 25755 | ID=Msa1449350-mRNA-1:three_prime_utr;Parent=Msa1449350-mRNA-1 |
Gene Sequence |
Protein sequence |