AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1114350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1114350 MtrunA17_Chr7g0256971 88.845 251 22 2 14 264 3 247 1.39e-150 440
Msa1114350 MtrunA17_Chr7g0256981 76.190 252 56 3 14 265 34 281 7.48e-125 376
Msa1114350 MtrunA17_Chr5g0421501 52.459 427 163 9 362 777 1 398 7.77e-120 366
Msa1114350 MtrunA17_Chr5g0415991 50.583 429 185 10 362 777 1 415 1.96e-114 353
Msa1114350 MtrunA17_Chr7g0257031 73.307 251 62 4 14 264 35 280 7.82e-114 347
Msa1114350 MtrunA17_Chr7g0257011 69.323 251 59 5 14 264 30 262 6.39e-108 331
Msa1114350 MtrunA17_Chr7g0256951 61.940 268 91 5 362 621 1 265 1.34e-92 291
Msa1114350 MtrunA17_Chr8g0348211 49.346 306 107 10 464 749 4 281 5.37e-67 223
Msa1114350 MtrunA17_Chr5g0421511 47.345 226 113 4 362 583 1 224 2.58e-52 182
Msa1114350 MtrunA17_Chr8g0385451 43.123 269 114 10 362 621 1 239 2.86e-48 171
Msa1114350 MtrunA17_Chr7g0256961 62.393 117 42 1 629 743 1 117 7.22e-40 143
Msa1114350 MtrunA17_Chr0c03g0490011 30.233 430 255 14 375 777 8 419 2.25e-37 145
Msa1114350 MtrunA17_Chr1g0172581 46.243 173 73 6 44 212 1 157 3.98e-36 134
Msa1114350 MtrunA17_Chr2g0303231 29.976 417 243 13 375 773 25 410 1.18e-31 128
Msa1114350 MtrunA17_Chr4g0028401 29.250 400 238 12 374 739 18 406 4.46e-31 127
Msa1114350 MtrunA17_Chr1g0154471 30.947 433 244 16 375 776 17 425 6.62e-31 126
Msa1114350 MtrunA17_Chr2g0325431 28.959 442 267 16 365 775 9 434 2.07e-30 125
Msa1114350 MtrunA17_Chr2g0303241 29.858 422 262 8 375 773 21 431 4.53e-30 124
Msa1114350 MtrunA17_Chr2g0303191 28.868 433 256 14 375 773 7 421 6.83e-30 123
Msa1114350 MtrunA17_Chr3g0085991 47.959 98 51 0 10 107 30 127 2.47e-28 117
Msa1114350 MtrunA17_Chr1g0148651 30.070 429 256 13 284 682 231 645 4.69e-28 120
Msa1114350 MtrunA17_Chr1g0148651 29.290 338 175 11 375 683 7 309 1.59e-22 103
Msa1114350 MtrunA17_Chr1g0150231 29.167 432 259 13 375 775 25 440 1.13e-27 117
Msa1114350 MtrunA17_Chr1g0148661 37.668 223 128 5 358 579 6 218 5.45e-27 111
Msa1114350 MtrunA17_Chr1g0150411 27.689 437 264 12 374 776 18 436 9.97e-26 111
Msa1114350 MtrunA17_Chr1g0148641 30.876 434 251 15 375 776 31 447 1.41e-25 110
Msa1114350 MtrunA17_Chr1g0151571 28.770 431 263 13 375 773 15 433 3.36e-25 109
Msa1114350 MtrunA17_Chr1g0150401 28.935 432 260 14 373 775 17 430 4.47e-25 108
Msa1114350 MtrunA17_Chr1g0154461 28.337 427 269 12 369 776 22 430 4.76e-25 108
Msa1114350 MtrunA17_Chr1g0149921 27.315 432 264 14 375 775 43 455 3.30e-22 100
Msa1114350 MtrunA17_Chr5g0417271 27.842 431 260 13 375 775 7 416 5.11e-21 96.7
Msa1114350 MtrunA17_Chr1g0151551 34.392 189 116 6 395 577 7 193 9.52e-17 82.0
Msa1114350 MtrunA17_Chr3g0086141 31.197 234 130 9 375 599 3 214 5.72e-14 72.0
Msa1114350 MtrunA17_Chr4g0041581 31.500 200 117 7 372 563 20 207 5.29e-13 72.0
Msa1114350 MtrunA17_Chr2g0278121 25.436 401 250 20 369 739 10 391 8.18e-13 71.2
Msa1114350 MtrunA17_Chr7g0236211 29.703 202 133 5 364 561 1 197 2.34e-12 69.7
Msa1114350 MtrunA17_Chr7g0246351 26.010 396 224 15 375 738 6 364 3.06e-12 69.3
Msa1114350 MtrunA17_Chr3g0137681 27.053 414 240 20 372 768 7 375 8.13e-12 67.8
Msa1114350 MtrunA17_Chr3g0096461 29.851 268 157 11 372 619 20 276 2.66e-11 66.6
Msa1114350 MtrunA17_Chr7g0266931 29.224 219 135 5 378 576 35 253 5.66e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1114350 AT5G03990.1 56.780 118 48 1 17 134 40 154 5.90e-37 141
Msa1114350 AT1G13570.3 30.607 428 254 13 375 777 6 415 2.37e-31 127
Msa1114350 AT1G13570.1 30.607 428 254 13 375 777 6 415 2.37e-31 127
Msa1114350 AT3G51940.1 48.454 97 49 1 17 112 32 128 1.98e-27 117
Msa1114350 AT3G51940.2 48.454 97 49 1 17 112 36 132 2.21e-27 116
Msa1114350 AT1G13570.2 35.021 237 135 6 375 605 6 229 2.07e-26 110
Msa1114350 AT5G03990.2 56.044 91 37 1 44 134 1 88 1.04e-23 101
Msa1114350 AT3G50710.1 26.154 455 250 21 374 773 1 424 1.48e-19 92.4
Msa1114350 AT1G69630.1 28.643 199 131 5 367 561 10 201 3.86e-16 82.4
Msa1114350 AT2G04230.1 27.093 454 257 23 375 775 13 445 2.41e-15 79.7
Msa1114350 AT5G44950.1 25.495 455 266 20 375 776 4 438 3.22e-14 76.3
Msa1114350 AT3G26922.1 29.688 256 141 9 375 600 14 260 4.37e-14 74.3
Msa1114350 AT3G26922.2 29.688 256 141 9 375 600 14 260 4.37e-14 74.3
Msa1114350 AT4G14103.3 31.667 240 149 9 375 604 8 242 1.07e-13 73.9
Msa1114350 AT4G14103.1 31.667 240 149 9 375 604 8 242 1.07e-13 73.9
Msa1114350 AT4G14103.2 31.667 240 149 9 375 604 8 242 1.48e-13 74.3
Msa1114350 AT1G78750.2 29.897 194 130 5 373 561 16 208 1.68e-13 73.9
Msa1114350 AT1G78750.1 29.897 194 130 5 373 561 16 208 1.68e-13 73.9
Msa1114350 AT4G13985.1 27.363 201 137 6 368 561 12 210 1.70e-13 73.9
Msa1114350 AT1G51370.2 31.163 215 132 8 368 579 13 214 2.06e-13 72.8
Msa1114350 AT1G80960.3 27.309 249 156 10 360 590 34 275 2.07e-13 73.9
Msa1114350 AT1G80960.5 27.309 249 156 10 360 590 34 275 2.38e-13 73.2
Msa1114350 AT1G80960.2 27.309 249 156 10 360 590 34 275 2.40e-13 73.6
Msa1114350 AT1G80960.4 27.309 249 156 10 360 590 34 275 2.40e-13 73.6
Msa1114350 AT1G80960.1 27.309 249 156 10 360 590 34 275 2.40e-13 73.6
Msa1114350 AT1G51370.3 31.163 215 132 8 368 579 13 214 2.74e-13 73.2
Msa1114350 AT1G51370.1 31.163 215 132 8 368 579 13 214 2.85e-13 73.2
Msa1114350 AT5G56420.1 27.982 218 133 7 375 581 6 210 4.63e-13 72.4
Msa1114350 AT5G56420.2 27.982 218 133 7 375 581 6 210 4.63e-13 72.4
Msa1114350 AT5G56420.3 27.982 218 133 7 375 581 6 210 4.63e-13 72.4
Msa1114350 AT3G58860.1 30.928 194 123 5 372 558 4 193 9.38e-13 71.6
Msa1114350 AT1G66290.1 28.643 199 127 7 365 560 19 205 9.66e-13 71.6
Msa1114350 AT1G80960.6 27.234 235 147 9 373 590 9 236 1.08e-12 71.6
Msa1114350 AT1G66300.1 30.500 200 124 7 365 560 20 208 1.23e-12 71.2
Msa1114350 AT5G56690.1 27.854 219 134 10 377 581 4 212 1.44e-12 70.9
Msa1114350 AT5G56440.1 28.636 220 127 10 374 579 1 204 2.65e-12 70.1
Msa1114350 AT1G16930.2 30.890 191 117 7 375 560 15 195 4.32e-12 69.7
Msa1114350 AT1G16930.1 30.890 191 117 7 375 560 15 195 4.32e-12 69.7
Msa1114350 AT1G16930.3 30.890 191 117 7 375 560 15 195 4.32e-12 69.7
Msa1114350 AT4G00160.1 29.439 214 134 8 375 579 16 221 5.55e-12 69.3
Msa1114350 AT4G10400.2 30.808 198 114 7 374 561 1 185 6.84e-12 68.6
Msa1114350 AT4G10400.3 30.808 198 114 7 374 561 1 185 6.84e-12 68.6
Msa1114350 AT4G10400.1 30.808 198 114 7 374 561 1 185 6.84e-12 68.6
Msa1114350 AT1G78840.1 29.779 272 151 15 375 629 5 253 9.76e-12 68.6
Msa1114350 AT1G78840.2 29.779 272 151 15 375 629 5 253 9.76e-12 68.6
Msa1114350 AT5G22610.1 26.316 418 236 20 375 746 18 409 3.30e-11 67.0
Msa1114350 AT4G14096.2 30.698 215 130 8 375 579 8 213 4.24e-11 66.6
Msa1114350 AT4G14096.1 30.698 215 130 8 375 579 8 213 4.24e-11 66.6
Msa1114350 AT5G22670.1 30.208 192 115 9 375 560 11 189 4.64e-11 66.2
Msa1114350 AT1G60400.1 27.184 206 134 5 362 560 1 197 5.66e-11 65.9
Msa1114350 AT1G16940.1 25.472 212 134 7 362 567 1 194 7.17e-11 65.5
Msa1114350 AT1G66320.1 26.961 204 134 7 365 563 19 212 9.59e-11 65.5

Find 179 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACTTGAGAGTCTTATTTC+TGG 0.211583 7_3:-61159244 Msa1114350:CDS
ATCCAATGACAGATACTTTA+TGG 0.217273 7_3:+61158593 None:intergenic
ACAGTTCTTCTTGGTGTCTT+TGG 0.220251 7_3:-61158080 Msa1114350:three_prime_UTR
TTAATACTCCTCGACAAAAT+AGG 0.221838 7_3:+61159445 None:intergenic
CATCCCTGAGCAGCATAATT+TGG 0.237901 7_3:+61164377 None:intergenic
GAACTAGCGGGAGTGGAAAT+TGG 0.240964 7_3:-61164184 Msa1114350:CDS
TTCAACACCACAGTTCTTCT+TGG 0.254225 7_3:-61158089 Msa1114350:three_prime_UTR
AATGAGCTAGTTTATTGCTC+TGG 0.287037 7_3:-61160072 Msa1114350:CDS
TACATCCCAATGTGGTAAAC+TGG 0.288050 7_3:-61164721 Msa1114350:CDS
GATCTTAGACTCACAGTATC+TGG 0.289709 7_3:-61159076 Msa1114350:CDS
GTGATAACTTTAGAAGTTAC+AGG 0.291798 7_3:+61159571 None:intergenic
GGTGGTGGCGGAGCTGCAAT+AGG 0.304847 7_3:+61160511 None:intergenic
AACAATAGATAAGTTTATTC+TGG 0.314088 7_3:+61158044 None:intergenic
TTGACATTCTTTACATTTGC+CGG 0.321794 7_3:-61159352 Msa1114350:CDS
TATCGACCCTGAACTATATC+TGG 0.326211 7_3:-61164567 Msa1114350:CDS
AACTAGCGGGAGTGGAAATT+GGG 0.328041 7_3:-61164183 Msa1114350:CDS
GATGAACATCCAAAAGAATA+TGG 0.329137 7_3:-61164293 Msa1114350:CDS
AATTCTATCTGCTACTGAAT+AGG 0.330182 7_3:-61157976 Msa1114350:three_prime_UTR
TCCCGCTAGTTCTTCCTTGT+TGG 0.331909 7_3:+61164195 None:intergenic
TGATAAACTTGCTGCTCAAT+TGG 0.332882 7_3:+61158010 None:intergenic
TCCTCGCTTGGTTGATCTTA+AGG 0.333872 7_3:-61158511 Msa1114350:intron
ATTCTATCTGCTACTGAATA+GGG 0.343501 7_3:-61157975 Msa1114350:three_prime_UTR
ACATGTCCGACACAGGGATA+TGG 0.346588 7_3:-61160183 Msa1114350:intron
CTCCCACTCTCAAAGTCTTA+TGG 0.350449 7_3:-61159156 Msa1114350:CDS
TTTGATCGAGATGTTTGTTC+TGG 0.354077 7_3:+61159404 None:intergenic
GCAGAAACCCTTGTGTTGTC+TGG 0.356070 7_3:-61160550 Msa1114350:CDS
GCATCAAATTCAAAATATTC+AGG 0.356102 7_3:+61159178 None:intergenic
AAGAACCCTGGATATCATTA+TGG 0.363292 7_3:-61164107 Msa1114350:CDS
CACGGCAACATAGAAGAAAA+AGG 0.364723 7_3:-61164521 Msa1114350:CDS
TCCACATCCAGATATAGTTC+AGG 0.367512 7_3:+61164560 None:intergenic
TAATACTCCTCGACAAAATA+GGG 0.373617 7_3:+61159446 None:intergenic
GCATTTCTGAAGAGTTGTTA+TGG 0.375426 7_3:-61158177 Msa1114350:CDS
TTCCTTCATTGAGAATGTAT+TGG 0.376018 7_3:-61158121 Msa1114350:exon
TATGAAGCACGGACACTTCT+CGG 0.381756 7_3:+61160158 None:intergenic
ATACATTGTCTTCTCTTGTA+AGG 0.390569 7_3:-61159377 Msa1114350:CDS
CTTACTTATACTGTTGGTCT+TGG 0.402082 7_3:-61158232 Msa1114350:CDS
TGTACAGCAAAGACCTAGTT+AGG 0.402681 7_3:-61159699 Msa1114350:CDS
TTCCAACTCCTCTGAATGCT+CGG 0.404790 7_3:+61158372 None:intergenic
CTTATTGTCTGTTACATTCG+AGG 0.413736 7_3:-61159272 Msa1114350:CDS
ATGAGCTAGTTTATTGCTCT+GGG 0.414514 7_3:-61160071 Msa1114350:intron
AGAGCCAAATTATGCTGCTC+AGG 0.419146 7_3:-61164381 Msa1114350:CDS
GCAGCATAATTTGGCTCTAA+AGG 0.423690 7_3:+61164386 None:intergenic
AGAAATAGAGGACGAGGAGG+AGG 0.424445 7_3:-61164050 Msa1114350:CDS
GGTATCAAGCAGTGCCTTTG+TGG 0.427328 7_3:-61164817 Msa1114350:CDS
TCGTCCCAGTTTACCACATT+GGG 0.428085 7_3:+61164716 None:intergenic
AGGACGAGGAGGAGGAAGAA+GGG 0.428704 7_3:-61164042 Msa1114350:CDS
ACTTTAGAAGTTACAGGGCC+AGG 0.432101 7_3:+61159577 None:intergenic
CTCCATAAAGTATCTGTCAT+TGG 0.434647 7_3:-61158595 Msa1114350:CDS
CTTCATACGGTTTGAGACAT+TGG 0.437891 7_3:-61160142 Msa1114350:CDS
AAAATAATGAAACAAACTCT+TGG 0.438543 7_3:-61164337 Msa1114350:CDS
ACATCATCGATGTAGATGTT+AGG 0.439574 7_3:+61164605 None:intergenic
GAGGACGAGGAGGAGGAAGA+AGG 0.441440 7_3:-61164043 Msa1114350:CDS
CTTCGATTGGCGCAGTTCCA+TGG 0.441528 7_3:-61164778 Msa1114350:CDS
GATAAACTTGCTGCTCAATT+GGG 0.444995 7_3:+61158011 None:intergenic
TTATTGCCATAATGATATCC+AGG 0.453080 7_3:+61164101 None:intergenic
ACAGCTCCGGCGATGGGTGG+TGG 0.460115 7_3:+61160496 None:intergenic
TATCAGATGAATAGAGGAAG+AGG 0.461809 7_3:-61164074 Msa1114350:CDS
TCCCCATCCTGGACCTGAAA+AGG 0.467185 7_3:+61164454 None:intergenic
CAAGGAAGAACTAGCGGGAG+TGG 0.471002 7_3:-61164191 Msa1114350:CDS
CATCCAGTAGATCCCCATCC+TGG 0.471551 7_3:+61164443 None:intergenic
AGAAGTGTCCGTGCTTCATA+CGG 0.471571 7_3:-61160155 Msa1114350:CDS
GGATGGGGATCTACTGGATG+GGG 0.471985 7_3:-61164440 Msa1114350:CDS
GGTCCAGGATGGGGATCTAC+TGG 0.474764 7_3:-61164446 Msa1114350:CDS
TTTCTAACCTTGGTATTGTA+CGG 0.475417 7_3:+61159004 None:intergenic
AAATAATGAAACAAACTCTT+GGG 0.477297 7_3:-61164336 Msa1114350:CDS
TTCAAAATTGAGACTATAAG+AGG 0.478082 7_3:+61160111 None:intergenic
AGAGGAAGAGGAAGAAATAG+AGG 0.480359 7_3:-61164062 Msa1114350:CDS
TCTACATCGATGATGTAGAT+TGG 0.480831 7_3:-61164598 Msa1114350:CDS
ATCTTGAAATTGTAGTCATA+AGG 0.483996 7_3:+61159496 None:intergenic
ACTTAAAAGTGCTCCTCGCT+TGG 0.484927 7_3:-61158523 Msa1114350:CDS
TTACAAGAGAAGACAATGTA+TGG 0.487113 7_3:+61159379 None:intergenic
GGAAATTGGGGAACATGGGA+TGG 0.487261 7_3:-61164170 Msa1114350:CDS
ATCCAATACATTCTCAATGA+AGG 0.488607 7_3:+61158119 None:intergenic
CAGGATGGGGATCTACTGGA+TGG 0.490854 7_3:-61164442 Msa1114350:CDS
CAAATTATGCTGCTCAGGGA+TGG 0.491857 7_3:-61164376 Msa1114350:CDS
CCACATCCAGATATAGTTCA+GGG 0.493499 7_3:+61164561 None:intergenic
ATGTTCTTATGCAACACAGC+GGG 0.494608 7_3:-61159546 Msa1114350:CDS
AAGCAGTGCCTTTGTGGGAA+AGG 0.497502 7_3:-61164811 Msa1114350:CDS
GGAGTGGAAATTGGGGAACA+TGG 0.499000 7_3:-61164175 Msa1114350:CDS
GTGTTGTCTGGGCATTTACA+CGG 0.501321 7_3:-61160538 Msa1114350:CDS
TGGAATTGACAGGTTAAATC+CGG 0.503112 7_3:+61159333 None:intergenic
TCCAACTCCTCTGAATGCTC+GGG 0.503319 7_3:+61158373 None:intergenic
AGAGGAAGAAATAGAGGACG+AGG 0.505495 7_3:-61164056 Msa1114350:CDS
AATGAGTATCAGATGAATAG+AGG 0.505831 7_3:-61164080 Msa1114350:CDS
ATGGGGATCTACTGGATGGG+GGG 0.506021 7_3:-61164438 Msa1114350:CDS
ATCAGGCAATGGTATGTCGC+AGG 0.507842 7_3:+61164628 None:intergenic
GATGGGGATCTACTGGATGG+GGG 0.508676 7_3:-61164439 Msa1114350:CDS
AGCAGAGAGTGAGACAGCTC+CGG 0.509070 7_3:+61160483 None:intergenic
AGGATGGGGATCTACTGGAT+GGG 0.509258 7_3:-61164441 Msa1114350:CDS
CTACAATTTCAAGATCTCAA+TGG 0.512699 7_3:-61159488 Msa1114350:CDS
TCGATGTAGATGTTAGGATC+AGG 0.516005 7_3:+61164611 None:intergenic
GCTCCGGCGATGGGTGGTGG+CGG 0.516215 7_3:+61160499 None:intergenic
TCTTGTTAGACAGAGTCATA+AGG 0.516788 7_3:+61159794 None:intergenic
CTTTGCTGTACAAGCGTGCT+AGG 0.517666 7_3:+61159710 None:intergenic
GCCCGAGCATTCAGAGGAGT+TGG 0.519376 7_3:-61158374 Msa1114350:CDS
CATCGTCAAACCGAAGTTGT+GGG 0.523522 7_3:+61159632 None:intergenic
GAACTTTATTCGAGTTGTCT+CGG 0.524949 7_3:+61157941 None:intergenic
AACATCCAAAAGAATATGGT+TGG 0.525026 7_3:-61164289 Msa1114350:CDS
GTGGTGGCGGAGCTGCAATA+GGG 0.526723 7_3:+61160512 None:intergenic
TGGATTCAGAGGGAACACTA+TGG 0.530591 7_3:-61164239 Msa1114350:CDS
CAGAAACCCTTGTGTTGTCT+GGG 0.537934 7_3:-61160549 Msa1114350:CDS
GAGTGAGACAGCTCCGGCGA+TGG 0.540783 7_3:+61160489 None:intergenic
GAGACTCTTACTTATACTGT+TGG 0.541773 7_3:-61158238 Msa1114350:CDS
AAATTATGCTGCTCAGGGAT+GGG 0.543052 7_3:-61164375 Msa1114350:CDS
GAGACAGCTCCGGCGATGGG+TGG 0.545594 7_3:+61160493 None:intergenic
GTCGTCCCAGTTTACCACAT+TGG 0.546368 7_3:+61164715 None:intergenic
GTATCAAGCAGTGCCTTTGT+GGG 0.546574 7_3:-61164816 Msa1114350:CDS
AGAAATCAGGTGGAATTGAC+AGG 0.547647 7_3:+61159323 None:intergenic
ACAAAATACTAGTCCTAACT+AGG 0.547719 7_3:+61159686 None:intergenic
CTTTAGAAGTTACAGGGCCA+GGG 0.547725 7_3:+61159578 None:intergenic
TCGATCAATATGATCATGAC+TGG 0.548556 7_3:+61159768 None:intergenic
CCCTGAACTATATCTGGATG+TGG 0.548749 7_3:-61164561 Msa1114350:CDS
ATATTGAGCGTTTGAAGTAA+CGG 0.549250 7_3:+61159217 None:intergenic
TCACTATCTTAAGTCGATCA+AGG 0.553035 7_3:+61158335 None:intergenic
GAGAAGAAAACAACATGTCA+TGG 0.554247 7_3:-61164133 Msa1114350:CDS
GCTCCGCCACCACCCATCGC+CGG 0.554387 7_3:-61160502 Msa1114350:CDS
TTGTCTGTTACATTCGAGGC+CGG 0.555309 7_3:-61159268 Msa1114350:CDS
GGACCTCCGTCCCACAACTT+CGG 0.559824 7_3:-61159642 Msa1114350:CDS
AGTGAGTCGCTGCAAATGTA+CGG 0.560655 7_3:+61165700 None:intergenic
GGAAGAAATAGAGGACGAGG+AGG 0.562801 7_3:-61164053 Msa1114350:CDS
TCATCGTCAAACCGAAGTTG+TGG 0.564883 7_3:+61159631 None:intergenic
ATGTCATCAATAACATTACA+TGG 0.569407 7_3:+61159733 None:intergenic
ATTCTCAAAGGTGGATTCAG+AGG 0.569906 7_3:-61164250 Msa1114350:CDS
GCGACTCACTCTCAACAGTA+AGG 0.576367 7_3:-61165687 Msa1114350:intron
GTAAATGCCCAGACAACACA+AGG 0.577249 7_3:+61160542 None:intergenic
GAGCCAAATTATGCTGCTCA+GGG 0.578391 7_3:-61164380 Msa1114350:CDS
ACTTCTATTAGCTTTCGCCA+TGG 0.579991 7_3:+61164761 None:intergenic
AATATGGTTGGCAAAATAGT+CGG 0.580038 7_3:-61164277 Msa1114350:CDS
TCAATTCCACCTGATTTCTG+CGG 0.580662 7_3:-61159319 Msa1114350:CDS
TAGCTCATTAAAATTAACAC+CGG 0.580913 7_3:+61160086 None:intergenic
TCTTAAGTCGATCAAGGCAA+TGG 0.584783 7_3:+61158341 None:intergenic
CTCAATATTGATGATTGTTG+TGG 0.587835 7_3:-61159202 Msa1114350:CDS
GCTGTGAATTTGAGTGAAAG+AGG 0.588921 7_3:-61158570 Msa1114350:CDS
GTCGGAATGATTCTCAAAGG+TGG 0.593549 7_3:-61164259 Msa1114350:CDS
TATGACTCTGTCTAACAAGA+AGG 0.594809 7_3:-61159791 Msa1114350:CDS
GTCTCAAACCGTATGAAGCA+CGG 0.595437 7_3:+61160147 None:intergenic
AGCATGCAATGAGTCTGATA+CGG 0.596787 7_3:-61158288 Msa1114350:CDS
GAGTGGAAATTGGGGAACAT+GGG 0.597593 7_3:-61164174 Msa1114350:CDS
CAAAACTTCCTTTCCCACAA+AGG 0.598547 7_3:+61164803 None:intergenic
TATCTGCTACTGAATAGGGC+TGG 0.599958 7_3:-61157971 Msa1114350:three_prime_UTR
TAGCCATAAGACTTTGAGAG+TGG 0.604440 7_3:+61159153 None:intergenic
GCAATGGTATGTCGCAGGGA+AGG 0.606634 7_3:+61164633 None:intergenic
GAGGAATGATATCTGCATAC+CGG 0.607865 7_3:+61158643 None:intergenic
TATTGCCATAATGATATCCA+GGG 0.608236 7_3:+61164102 None:intergenic
ATGTCATGGTCTAAGAACCC+TGG 0.610208 7_3:-61164119 Msa1114350:CDS
ACATCCCAATGTGGTAAACT+GGG 0.612977 7_3:-61164720 Msa1114350:CDS
GAAAGCTAATAGAAGTCAAG+AGG 0.614860 7_3:-61164754 Msa1114350:CDS
CATGGGATGGATATAACAGA+AGG 0.616272 7_3:-61164157 Msa1114350:CDS
TCAGGCAATGGTATGTCGCA+GGG 0.618603 7_3:+61164629 None:intergenic
AGCTCATTAAAATTAACACC+GGG 0.619147 7_3:+61160087 None:intergenic
TTCTCAAAGGTGGATTCAGA+GGG 0.619848 7_3:-61164249 Msa1114350:CDS
GGACGACTCTGCTGTCAAAG+AGG 0.623703 7_3:-61164699 Msa1114350:CDS
ATAGTCGGAATGATTCTCAA+AGG 0.629240 7_3:-61164262 Msa1114350:CDS
TACGAGAATCTCGATGACCC+TGG 0.632706 7_3:-61159595 Msa1114350:CDS
TTAAAGCCGCAGAAATCAGG+TGG 0.633570 7_3:+61159313 None:intergenic
AGTAAGAGTCTCTAACGATG+TGG 0.634118 7_3:+61158249 None:intergenic
CAATGGAATACATTGATACG+TGG 0.634498 7_3:-61159471 Msa1114350:CDS
AAAAGAGCTACTGAGAATCA+CGG 0.636950 7_3:+61164490 None:intergenic
GCAAGCGCCCGAGCATTCAG+AGG 0.637716 7_3:-61158380 Msa1114350:CDS
TGATAACTTTAGAAGTTACA+GGG 0.637833 7_3:+61159572 None:intergenic
ACCTTAAGATCAACCAAGCG+AGG 0.639054 7_3:+61158510 None:intergenic
AGCCATAAGACTTTGAGAGT+GGG 0.644910 7_3:+61159154 None:intergenic
ACCAACAAGGAAGAACTAGC+GGG 0.647044 7_3:-61164196 Msa1114350:CDS
TACCAACAAGGAAGAACTAG+CGG 0.647660 7_3:-61164197 Msa1114350:CDS
GTCAAACCGAAGTTGTGGGA+CGG 0.658111 7_3:+61159636 None:intergenic
GAAAGAGAAGCAGTAGCCCA+CGG 0.662897 7_3:-61164539 Msa1114350:CDS
AATAAGACTCTCAAGTACAC+CGG 0.679738 7_3:+61159249 None:intergenic
TTGCATAACAAGTACCAACA+AGG 0.680528 7_3:-61164209 Msa1114350:CDS
AAACCGAAGTTGTGGGACGG+AGG 0.683191 7_3:+61159639 None:intergenic
CTGTCAGCCGTACAATACCA+AGG 0.683202 7_3:-61159011 Msa1114350:intron
TAGATGTTAGGATCAGGCAA+TGG 0.686387 7_3:+61164617 None:intergenic
ATTCAGAGGGAACACTATGG+TGG 0.686648 7_3:-61164236 Msa1114350:CDS
ACTAGCGGGAGTGGAAATTG+GGG 0.689019 7_3:-61164182 Msa1114350:CDS
AAAGACACCAAGAAGAACTG+TGG 0.700686 7_3:+61158082 None:intergenic
TATGTCTCTACATCCCAATG+TGG 0.711609 7_3:-61164729 Msa1114350:CDS
TGTTCTTATGCAACACAGCG+GGG 0.716834 7_3:-61159545 Msa1114350:CDS
TTGTCTGGGCATTTACACGG+CGG 0.717403 7_3:-61160535 Msa1114350:CDS
TAAATGCCCAGACAACACAA+GGG 0.761602 7_3:+61160543 None:intergenic
GATGTTCTTATGCAACACAG+CGG 0.783463 7_3:-61159547 Msa1114350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTAATTTAATTTAAT+TGG - chr7_3:61161457-61161476 Msa1114350:intron 0.0%
!! AATATTAATAAGTAAATGAA+AGG + chr7_3:61157991-61158010 None:intergenic 10.0%
!! TCATTTACTTATTAATATTA+TGG - chr7_3:61157992-61158011 Msa1114350:three_prime_UTR 10.0%
!!! ATAAATTTTGAAATTTTTGA+TGG - chr7_3:61160848-61160867 Msa1114350:intron 10.0%
!!! TATTTTAAAACATTACAATT+TGG + chr7_3:61160874-61160893 None:intergenic 10.0%
!!! AGAAATTTTTTGAAATTTAT+AGG - chr7_3:61160906-61160925 Msa1114350:intron 10.0%
!!! ATCTTTTTTGAATAAATTTT+GGG + chr7_3:61161097-61161116 None:intergenic 10.0%
!!! AATCTTTTTTGAATAAATTT+TGG + chr7_3:61161098-61161117 None:intergenic 10.0%
!!! TTTTTTAATTTTGCAATTTT+AGG - chr7_3:61161261-61161280 Msa1114350:intron 10.0%
!!! TTTTTAATTTTGCAATTTTA+GGG - chr7_3:61161262-61161281 Msa1114350:intron 10.0%
!!! TTCAATTCAATTAAATTTTT+TGG + chr7_3:61161559-61161578 None:intergenic 10.0%
!!! TATGTATTTTTACATTAAAT+AGG + chr7_3:61162500-61162519 None:intergenic 10.0%
!! TCTTTATATAAAAAAATTGA+TGG - chr7_3:61162525-61162544 Msa1114350:intron 10.0%
!!! TAATGCTTTTTTTTTTTTTT+TGG + chr7_3:61162645-61162664 None:intergenic 10.0%
!!! TATATTTATTATTTTTCAGT+TGG - chr7_3:61164662-61164681 Msa1114350:CDS 10.0%
!!! ATATTTATTATTTTTCAGTT+GGG - chr7_3:61164663-61164682 Msa1114350:CDS 10.0%
!! ATTACTATGATTTATTGTAT+AGG - chr7_3:61158023-61158042 Msa1114350:three_prime_UTR 15.0%
!! ACAAAAGATAAACTAATAAA+AGG + chr7_3:61158278-61158297 None:intergenic 15.0%
!! AACCAAAATCAAAATAATTT+CGG + chr7_3:61158473-61158492 None:intergenic 15.0%
!!! ATCAGAAAATATATTGATTT+TGG - chr7_3:61158500-61158519 Msa1114350:intron 15.0%
!!! AAATCTATTTGTTAACATTT+TGG - chr7_3:61160816-61160835 Msa1114350:intron 15.0%
!!! AATCTATTTGTTAACATTTT+GGG - chr7_3:61160817-61160836 Msa1114350:intron 15.0%
!!! TGTAATGTTTTAAAATATTG+AGG - chr7_3:61160877-61160896 Msa1114350:intron 15.0%
!! AATTGCAAAATTAAAAAACT+TGG + chr7_3:61161259-61161278 None:intergenic 15.0%
!! TAAATTAAATTCAGCAAATA+TGG + chr7_3:61161380-61161399 None:intergenic 15.0%
!!! AAAATTAGATCTTGTTTAAT+TGG + chr7_3:61162008-61162027 None:intergenic 15.0%
!!! AATCATAATTTCTTTTACTA+AGG - chr7_3:61162055-61162074 Msa1114350:intron 15.0%
!!! ATCATAATTTCTTTTACTAA+GGG - chr7_3:61162056-61162075 Msa1114350:intron 15.0%
!! ATAAAAATAGGGATTATAAT+AGG + chr7_3:61162273-61162292 None:intergenic 15.0%
!!! TATTATAATCCCTATTTTTA+TGG - chr7_3:61162272-61162291 Msa1114350:intron 15.0%
!! GTATTTAGAAAAAATATGTT+TGG + chr7_3:61162322-61162341 None:intergenic 15.0%
!! AAAAGAAAAAAAATCTTGTT+TGG + chr7_3:61162810-61162829 None:intergenic 15.0%
!!! AAAACTAAAAAAGAGTTTTT+GGG + chr7_3:61162943-61162962 None:intergenic 15.0%
!!! AAAAACTAAAAAAGAGTTTT+TGG + chr7_3:61162944-61162963 None:intergenic 15.0%
!!! TGATTTTTTCAATTTATTAG+TGG + chr7_3:61163394-61163413 None:intergenic 15.0%
!! AAAAAAAAAAATTCCTAGTT+TGG - chr7_3:61163617-61163636 Msa1114350:intron 15.0%
!!! ATCCGAAAATAATTTGATTT+TGG - chr7_3:61158330-61158349 Msa1114350:CDS 20.0%
!!! TGCCAAAATCAAATTATTTT+CGG + chr7_3:61158335-61158354 None:intergenic 20.0%
!! ACATAAGATAGACTAATAAA+AGG + chr7_3:61158448-61158467 None:intergenic 20.0%
!! ACCAAAATCAAAATAATTTC+GGG + chr7_3:61158472-61158491 None:intergenic 20.0%
!!! TTTATTAACCATGTTTTTGT+TGG - chr7_3:61158649-61158668 Msa1114350:intron 20.0%
!! AAAATAATGAAACAAACTCT+TGG - chr7_3:61159287-61159306 Msa1114350:CDS 20.0%
!! AAATAATGAAACAAACTCTT+GGG - chr7_3:61159288-61159307 Msa1114350:CDS 20.0%
!!! TTTTGTTACATTTATCAAGA+TGG - chr7_3:61159776-61159795 Msa1114350:CDS 20.0%
!!! CATTTCAAAATGTTTTTGTT+TGG - chr7_3:61160778-61160797 Msa1114350:intron 20.0%
!!! TTCAAATGACATCTAAAATT+AGG + chr7_3:61161004-61161023 None:intergenic 20.0%
!!! TTGCAATTGTAATGTTTTAA+GGG + chr7_3:61161157-61161176 None:intergenic 20.0%
!!! TCAATTAAATTTTTTGGTAG+TGG + chr7_3:61161553-61161572 None:intergenic 20.0%
!! AACTGTTATTCAAGAAATAA+TGG + chr7_3:61161602-61161621 None:intergenic 20.0%
!!! TTTTTTTTCAAGTAGTCTAA+TGG + chr7_3:61161773-61161792 None:intergenic 20.0%
!! CACATGATTGATTAAATTAA+TGG + chr7_3:61161798-61161817 None:intergenic 20.0%
!!! TAGAACAATTCAGTTAATTT+TGG - chr7_3:61161952-61161971 Msa1114350:intron 20.0%
!!! AAGTTATATTTATTGATTCC+CGG - chr7_3:61162091-61162110 Msa1114350:intron 20.0%
!!! AGTTTACTAAATTTTATTCC+CGG - chr7_3:61162154-61162173 Msa1114350:intron 20.0%
!! GTTTACTAAATAATATTCCT+AGG + chr7_3:61162300-61162319 None:intergenic 20.0%
!!! CATATTTTTTCTAAATACCT+AGG - chr7_3:61162324-61162343 Msa1114350:intron 20.0%
!! AGTTTATCAAATTTATTCGT+AGG + chr7_3:61162388-61162407 None:intergenic 20.0%
!! TGATTGATACATATTTCAAT+GGG + chr7_3:61162683-61162702 None:intergenic 20.0%
!! TTGATTGATACATATTTCAA+TGG + chr7_3:61162684-61162703 None:intergenic 20.0%
!!! TTTAAAATTACAGTTAAACG+AGG - chr7_3:61163001-61163020 Msa1114350:intron 20.0%
!! TTAAAATTACAGTTAAACGA+GGG - chr7_3:61163002-61163021 Msa1114350:intron 20.0%
!!! TGATTATTCTGAAATTTCTA+TGG - chr7_3:61163662-61163681 Msa1114350:intron 20.0%
!! AACAATAGATAAGTTTATTC+TGG + chr7_3:61165583-61165602 None:intergenic 20.0%
! ACATTACTCAATTTAAACTG+CGG + chr7_3:61158409-61158428 None:intergenic 25.0%
!!! ACCCGAAATTATTTTGATTT+TGG - chr7_3:61158468-61158487 Msa1114350:intron 25.0%
! TAAGAAATCCAACAAAAACA+TGG + chr7_3:61158660-61158679 None:intergenic 25.0%
!! AAGGGTAAATTTTGCTTATA+CGG - chr7_3:61159600-61159619 Msa1114350:CDS 25.0%
!! AGAGGTATATATAATGGTAA+TGG - chr7_3:61159841-61159860 Msa1114350:intron 25.0%
! ATGCAATTACAATTAAGTGA+AGG - chr7_3:61159883-61159902 Msa1114350:intron 25.0%
!!! TGCATATTGATATTGGTTTA+AGG + chr7_3:61160155-61160174 None:intergenic 25.0%
! TGATTGATGTAAAACTTACT+TGG - chr7_3:61160180-61160199 Msa1114350:intron 25.0%
! ATGTAAAACTTACTTGGAAA+AGG - chr7_3:61160186-61160205 Msa1114350:intron 25.0%
! GAAAATGTCAAAGTCTAAAT+AGG + chr7_3:61160413-61160432 None:intergenic 25.0%
!!! ATATAGGGTCATTTTTTCTA+GGG + chr7_3:61160508-61160527 None:intergenic 25.0%
!!! AATATAGGGTCATTTTTTCT+AGG + chr7_3:61160509-61160528 None:intergenic 25.0%
!!! TGCAATTGTAATGTTTTAAG+GGG + chr7_3:61161156-61161175 None:intergenic 25.0%
!! CTTGCAATTGTAATGTTTTA+AGG + chr7_3:61161158-61161177 None:intergenic 25.0%
! CAAAAACTTCTATTAAACTG+TGG + chr7_3:61161203-61161222 None:intergenic 25.0%
! AAACTAAAACACAATCAAAC+AGG + chr7_3:61162892-61162911 None:intergenic 25.0%
! ACAATGCATAAAAATATGCA+AGG - chr7_3:61161508-61161527 Msa1114350:intron 25.0%
! TTATCAGACAAGGAAAAAAA+AGG + chr7_3:61161825-61161844 None:intergenic 25.0%
!!! TTGATAATGCCGATAATATT+AGG + chr7_3:61161919-61161938 None:intergenic 25.0%
! TGGATGACTAATCAAAAATT+CGG - chr7_3:61161972-61161991 Msa1114350:intron 25.0%
!! TAGATCTTGTTTAATTGGAT+AGG + chr7_3:61162003-61162022 None:intergenic 25.0%
!!! AGTTATATTTATTGATTCCC+GGG - chr7_3:61162092-61162111 Msa1114350:intron 25.0%
!! TATTCCTATCATTTTATTCC+CGG + chr7_3:61162113-61162132 None:intergenic 25.0%
! AGTAAACTTGTAACAAACAT+AGG + chr7_3:61162142-61162161 None:intergenic 25.0%
!! GTTTACTAAATTTTATTCCC+GGG - chr7_3:61162155-61162174 Msa1114350:intron 25.0%
! AAAAAATTTCCCAAGGAAAA+GGG - chr7_3:61162200-61162219 Msa1114350:intron 25.0%
! ATTCCTTGGAATATAAAGAT+GGG + chr7_3:61162359-61162378 None:intergenic 25.0%
! CACCCTAATATTGTAATATA+TGG - chr7_3:61162419-61162438 Msa1114350:intron 25.0%
! CGCCATATATTACAATATTA+GGG + chr7_3:61162424-61162443 None:intergenic 25.0%
! CCTAATATTGTAATATATGG+CGG - chr7_3:61162422-61162441 Msa1114350:intron 25.0%
!! TTTTGTAGGCCAATTATAAA+AGG + chr7_3:61162451-61162470 None:intergenic 25.0%
!! TGTAGATGTAAGTATTTTGT+AGG + chr7_3:61162465-61162484 None:intergenic 25.0%
!!! CTGTTTTTGAAAACAGTTTT+AGG + chr7_3:61162782-61162801 None:intergenic 25.0%
!! CTAAAACTGTTTTCAAAAAC+AGG - chr7_3:61162780-61162799 Msa1114350:intron 25.0%
! AAACTAAAACACAATCAAAC+AGG - chr7_3:61162892-61162911 Msa1114350:intron 25.0%
! GATAACTATGATCTGTTATT+AGG - chr7_3:61163214-61163233 Msa1114350:intron 25.0%
! TATGATCTGTTATTAGGTTA+GGG - chr7_3:61163220-61163239 Msa1114350:intron 25.0%
! TTTCAATTTATTAGTGGTGT+CGG + chr7_3:61163388-61163407 None:intergenic 25.0%
! TTCAAAATTGAGACTATAAG+AGG + chr7_3:61163516-61163535 None:intergenic 25.0%
! TAGCTCATTAAAATTAACAC+CGG + chr7_3:61163541-61163560 None:intergenic 25.0%
! ATGTCATCAATAACATTACA+TGG + chr7_3:61163894-61163913 None:intergenic 25.0%
!! CTAGTATTTTGTCAAAAAAG+TGG - chr7_3:61163949-61163968 Msa1114350:intron 25.0%
!! TGATAACTTTAGAAGTTACA+GGG + chr7_3:61164055-61164074 None:intergenic 25.0%
! ATCTTGAAATTGTAGTCATA+AGG + chr7_3:61164131-61164150 None:intergenic 25.0%
! GCATCAAATTCAAAATATTC+AGG + chr7_3:61164449-61164468 None:intergenic 25.0%
!!! CAATGTTGAATTTTGATTGA+TGG - chr7_3:61164858-61164877 Msa1114350:intron 25.0%
TCTCTCTATTTCAACAATGT+TGG - chr7_3:61158170-61158189 Msa1114350:CDS 30.0%
! TATTTCAACAATGTTGGTCT+AGG - chr7_3:61158176-61158195 Msa1114350:CDS 30.0%
! ATGTTGGTCTAGGTATTTAT+TGG - chr7_3:61158186-61158205 Msa1114350:CDS 30.0%
ATGTTCAAGTAGGTATCTAT+TGG - chr7_3:61158355-61158374 Msa1114350:CDS 30.0%
! ATTCATTGTCTGATTCCTTT+TGG - chr7_3:61158778-61158797 Msa1114350:intron 30.0%
! TCTTTTGGATGTTCATCAAT+AGG + chr7_3:61159328-61159347 None:intergenic 30.0%
GATGAACATCCAAAAGAATA+TGG - chr7_3:61159331-61159350 Msa1114350:CDS 30.0%
AACATCCAAAAGAATATGGT+TGG - chr7_3:61159335-61159354 Msa1114350:CDS 30.0%
! TTTTGCCAACCATATTCTTT+TGG + chr7_3:61159343-61159362 None:intergenic 30.0%
AATATGGTTGGCAAAATAGT+CGG - chr7_3:61159347-61159366 Msa1114350:CDS 30.0%
TATTGCCATAATGATATCCA+GGG + chr7_3:61159525-61159544 None:intergenic 30.0%
TTATTGCCATAATGATATCC+AGG + chr7_3:61159526-61159545 None:intergenic 30.0%
AATGAGTATCAGATGAATAG+AGG - chr7_3:61159544-61159563 Msa1114350:CDS 30.0%
! AAATTTTGCTTATACGGACA+AGG - chr7_3:61159606-61159625 Msa1114350:CDS 30.0%
ATATTCATTTACCATGCACT+GGG + chr7_3:61159640-61159659 None:intergenic 30.0%
! CATTTATCAAGATGGCTTTA+TGG - chr7_3:61159784-61159803 Msa1114350:CDS 30.0%
! GTACTGAGAGGTATATATAA+TGG - chr7_3:61159835-61159854 Msa1114350:intron 30.0%
GAAGGAAAATTGTTTCATTC+TGG - chr7_3:61159901-61159920 Msa1114350:intron 30.0%
CTCAGACTCAACTAATTTAA+GGG + chr7_3:61160081-61160100 None:intergenic 30.0%
CAGTCTTTGCATATTGATAT+TGG + chr7_3:61160162-61160181 None:intergenic 30.0%
!! GTGATATTATCTAGCTTTCA+GGG + chr7_3:61160270-61160289 None:intergenic 30.0%
CTGAAAGCTAGATAATATCA+CGG - chr7_3:61160269-61160288 Msa1114350:intron 30.0%
! TCACGGTATAAGCTTTTAAA+CGG - chr7_3:61160286-61160305 Msa1114350:intron 30.0%
! TGTTTATGCTTTTGTCCATT+AGG + chr7_3:61160338-61160357 None:intergenic 30.0%
!!! TATAGGGTCATTTTTTCTAG+GGG + chr7_3:61160507-61160526 None:intergenic 30.0%
AATACTTGAGTGACTTTGAT+TGG - chr7_3:61160641-61160660 Msa1114350:intron 30.0%
GAGTCAGTTTGAAAATTATG+AGG - chr7_3:61160928-61160947 Msa1114350:intron 30.0%
!!! TTAAATTTTTTGGTAGTGGC+CGG + chr7_3:61161549-61161568 None:intergenic 30.0%
ACATTGCATAATATATGCAG+AGG - chr7_3:61161691-61161710 Msa1114350:intron 30.0%
GGTGTCTAACCTAATATTAT+CGG - chr7_3:61161907-61161926 Msa1114350:intron 30.0%
! ATTCCTATCATTTTATTCCC+GGG + chr7_3:61162112-61162131 None:intergenic 30.0%
!!! GGGAAATTTTTTCTATTCCT+AGG + chr7_3:61162192-61162211 None:intergenic 30.0%
GGAATAGAAAAAATTTCCCA+AGG - chr7_3:61162193-61162212 Msa1114350:intron 30.0%
GAAAAAATTTCCCAAGGAAA+AGG - chr7_3:61162199-61162218 Msa1114350:intron 30.0%
GAATTTATTCTCATCTCCAT+GGG + chr7_3:61162239-61162258 None:intergenic 30.0%
TGAATTTATTCTCATCTCCA+TGG + chr7_3:61162240-61162259 None:intergenic 30.0%
TCCTAGGAACCATAAAAATA+GGG + chr7_3:61162284-61162303 None:intergenic 30.0%
TTCCTAGGAACCATAAAAAT+AGG + chr7_3:61162285-61162304 None:intergenic 30.0%
! AAGATGGGAATTTTATTCCT+AGG + chr7_3:61162344-61162363 None:intergenic 30.0%
ATTCCCATCTTTATATTCCA+AGG - chr7_3:61162353-61162372 Msa1114350:intron 30.0%
CATTCCTTGGAATATAAAGA+TGG + chr7_3:61162360-61162379 None:intergenic 30.0%
CCGCCATATATTACAATATT+AGG + chr7_3:61162425-61162444 None:intergenic 30.0%
CTATGATCTGTTATTAGGTT+AGG - chr7_3:61163219-61163238 Msa1114350:intron 30.0%
! ATAGTCTCAATTTTGAATCC+CGG - chr7_3:61163519-61163538 Msa1114350:intron 30.0%
AGCTCATTAAAATTAACACC+GGG + chr7_3:61163540-61163559 None:intergenic 30.0%
TCTTTAGTCGTTTCTTAGAT+CGG - chr7_3:61163576-61163595 Msa1114350:intron 30.0%
TCTTTCCAATCATTGTAGTA+TGG - chr7_3:61163766-61163785 Msa1114350:intron 30.0%
ACAATCCATACTACAATGAT+TGG + chr7_3:61163774-61163793 None:intergenic 30.0%
ACAAAATACTAGTCCTAACT+AGG + chr7_3:61163941-61163960 None:intergenic 30.0%
! GTATTTTGTCAAAAAAGTGG+AGG - chr7_3:61163952-61163971 Msa1114350:intron 30.0%
! GTGATAACTTTAGAAGTTAC+AGG + chr7_3:61164056-61164075 None:intergenic 30.0%
CTACAATTTCAAGATCTCAA+TGG - chr7_3:61164136-61164155 Msa1114350:CDS 30.0%
TAATACTCCTCGACAAAATA+GGG + chr7_3:61164181-61164200 None:intergenic 30.0%
TTAATACTCCTCGACAAAAT+AGG + chr7_3:61164182-61164201 None:intergenic 30.0%
TTACAAGAGAAGACAATGTA+TGG + chr7_3:61164248-61164267 None:intergenic 30.0%
ATACATTGTCTTCTCTTGTA+AGG - chr7_3:61164247-61164266 Msa1114350:CDS 30.0%
TTGACATTCTTTACATTTGC+CGG - chr7_3:61164272-61164291 Msa1114350:CDS 30.0%
! ATATTGAGCGTTTGAAGTAA+CGG + chr7_3:61164410-61164429 None:intergenic 30.0%
! CTCAATATTGATGATTGTTG+TGG - chr7_3:61164422-61164441 Msa1114350:CDS 30.0%
!!! GAAATCCTCTCAATGTTTTT+TGG + chr7_3:61164590-61164609 None:intergenic 30.0%
TTTCTAACCTTGGTATTGTA+CGG + chr7_3:61164623-61164642 None:intergenic 30.0%
! TTCTAGCTGATATGTTAGTT+TGG - chr7_3:61164691-61164710 Msa1114350:CDS 30.0%
TTTCAATGTACATGTTGGAT+TGG + chr7_3:61164885-61164904 None:intergenic 30.0%
ACAACTTTCAATGTACATGT+TGG + chr7_3:61164890-61164909 None:intergenic 30.0%
ATATGCACAAACAACACTAT+GGG + chr7_3:61164931-61164950 None:intergenic 30.0%
!!! GTTTTGTTGTTTGTATGCAT+AGG - chr7_3:61164957-61164976 Msa1114350:intron 30.0%
!!! AATGAAGTTTTTAGCAGTGT+GGG + chr7_3:61165006-61165025 None:intergenic 30.0%
ATCCAATGACAGATACTTTA+TGG + chr7_3:61165034-61165053 None:intergenic 30.0%
TTCCTTCATTGAGAATGTAT+TGG - chr7_3:61165503-61165522 Msa1114350:intron 30.0%
ATCCAATACATTCTCAATGA+AGG + chr7_3:61165508-61165527 None:intergenic 30.0%
AATTCTATCTGCTACTGAAT+AGG - chr7_3:61165648-61165667 Msa1114350:intron 30.0%
ATTCTATCTGCTACTGAATA+GGG - chr7_3:61165649-61165668 Msa1114350:intron 30.0%
!! CATCGGAGTCGATTTTATAT+AGG + chr7_3:61158112-61158131 None:intergenic 35.0%
!! GATTTTGGCAATGTTCAAGT+AGG - chr7_3:61158345-61158364 Msa1114350:CDS 35.0%
ATGTTCAAGTAGGTATCTAC+TGG - chr7_3:61158525-61158544 Msa1114350:CDS 35.0%
! TACTGGTTAGACTCAAATTG+CGG - chr7_3:61158542-61158561 Msa1114350:CDS 35.0%
AAATTGCGGTATGATGTGTA+AGG - chr7_3:61158556-61158575 Msa1114350:CDS 35.0%
GAAAGCTAATAGAAGTCAAG+AGG - chr7_3:61158870-61158889 Msa1114350:intron 35.0%
CATTTGACAATGCAAAAAGC+AGG - chr7_3:61158948-61158967 Msa1114350:intron 35.0%
! ACAATGCAAAAAGCAGGTTT+TGG - chr7_3:61158954-61158973 Msa1114350:intron 35.0%
! CAATGCAAAAAGCAGGTTTT+GGG - chr7_3:61158955-61158974 Msa1114350:intron 35.0%
ACATCATCGATGTAGATGTT+AGG + chr7_3:61159022-61159041 None:intergenic 35.0%
TCTACATCGATGATGTAGAT+TGG - chr7_3:61159026-61159045 Msa1114350:CDS 35.0%
! TTTTTCTTCTATGTTGCCGT+GGG + chr7_3:61159104-61159123 None:intergenic 35.0%
AAAAGAGCTACTGAGAATCA+CGG + chr7_3:61159137-61159156 None:intergenic 35.0%
ATAGTCGGAATGATTCTCAA+AGG - chr7_3:61159362-61159381 Msa1114350:CDS 35.0%
TTGCATAACAAGTACCAACA+AGG - chr7_3:61159415-61159434 Msa1114350:CDS 35.0%
GAGAAGAAAACAACATGTCA+TGG - chr7_3:61159491-61159510 Msa1114350:CDS 35.0%
AAGAACCCTGGATATCATTA+TGG - chr7_3:61159517-61159536 Msa1114350:CDS 35.0%
TATCAGATGAATAGAGGAAG+AGG - chr7_3:61159550-61159569 Msa1114350:CDS 35.0%
GATATTCATTTACCATGCAC+TGG + chr7_3:61159641-61159660 None:intergenic 35.0%
TTTATAGAGTCTTTGCTTGC+AGG + chr7_3:61159675-61159694 None:intergenic 35.0%
GACTCTATAAAGCTGCTAAA+AGG - chr7_3:61159684-61159703 Msa1114350:CDS 35.0%
!! AAAAGGCCTGTTTTGTTAAC+TGG - chr7_3:61159701-61159720 Msa1114350:CDS 35.0%
!! AAAGGCCTGTTTTGTTAACT+GGG - chr7_3:61159702-61159721 Msa1114350:CDS 35.0%
AAACACCCAGTTAACAAAAC+AGG + chr7_3:61159710-61159729 None:intergenic 35.0%
! ATTATACCTACAGTACTGAG+AGG - chr7_3:61159823-61159842 Msa1114350:intron 35.0%
TATATACCTCTCAGTACTGT+AGG + chr7_3:61159832-61159851 None:intergenic 35.0%
GTACACCACTTAAATCTTCT+TGG - chr7_3:61160024-61160043 Msa1114350:intron 35.0%
AACCTCCAAGAAGATTTAAG+TGG + chr7_3:61160032-61160051 None:intergenic 35.0%
CCTCAGACTCAACTAATTTA+AGG + chr7_3:61160082-61160101 None:intergenic 35.0%
CCTTAAATTAGTTGAGTCTG+AGG - chr7_3:61160079-61160098 Msa1114350:CDS 35.0%
TAAATTAGTTGAGTCTGAGG+AGG - chr7_3:61160082-61160101 Msa1114350:CDS 35.0%
!! CGTGATATTATCTAGCTTTC+AGG + chr7_3:61160271-61160290 None:intergenic 35.0%
! CACGGTATAAGCTTTTAAAC+GGG - chr7_3:61160287-61160306 Msa1114350:intron 35.0%
GTTGATGCAAAAACTCCTAA+TGG - chr7_3:61160320-61160339 Msa1114350:intron 35.0%
!! TTTTCTAGGGGAGCTATATA+GGG + chr7_3:61160495-61160514 None:intergenic 35.0%
!! TTTTTCTAGGGGAGCTATAT+AGG + chr7_3:61160496-61160515 None:intergenic 35.0%
TTACACTTACATCCGAGTTT+GGG + chr7_3:61160579-61160598 None:intergenic 35.0%
! GTCACTCAAGTATTTTGCAA+AGG + chr7_3:61160635-61160654 None:intergenic 35.0%
GCATAAAAATATGCAAGGTC+CGG - chr7_3:61161513-61161532 Msa1114350:intron 35.0%
CATAAAAATATGCAAGGTCC+GGG - chr7_3:61161514-61161533 Msa1114350:intron 35.0%
ATAAAAATATGCAAGGTCCG+GGG - chr7_3:61161515-61161534 Msa1114350:intron 35.0%
!!! TAAATTTTTTGGTAGTGGCC+GGG + chr7_3:61161548-61161567 None:intergenic 35.0%
CTAAGCTCACAAAGACTTAA+TGG + chr7_3:61161657-61161676 None:intergenic 35.0%
AATGTGAAGAAGTGAGATGT+CGG + chr7_3:61161731-61161750 None:intergenic 35.0%
!! ACTTGTCACTTTATCAGACA+AGG + chr7_3:61161835-61161854 None:intergenic 35.0%
ATTCCCGGGAATAAAATGAT+AGG - chr7_3:61162106-61162125 Msa1114350:intron 35.0%
! TCCTAGGAACATTTTATACC+CGG + chr7_3:61162176-61162195 None:intergenic 35.0%
!!! TCCCTATTTTTATGGTTCCT+AGG - chr7_3:61162280-61162299 Msa1114350:intron 35.0%
TTCGTAGGAATAACATTCCT+TGG + chr7_3:61162373-61162392 None:intergenic 35.0%
! TGGCGGTTTCCTTTTATAAT+TGG - chr7_3:61162439-61162458 Msa1114350:intron 35.0%
!!! TTTTGGGAAGTGTTTCAAAC+AGG + chr7_3:61162927-61162946 None:intergenic 35.0%
TATCTTTATCGGACACGAAA+TGG + chr7_3:61163047-61163066 None:intergenic 35.0%
ATTTCGTGTCCGATAAAGAT+AGG - chr7_3:61163046-61163065 Msa1114350:intron 35.0%
TTTCGTGTCCGATAAAGATA+GGG - chr7_3:61163047-61163066 Msa1114350:intron 35.0%
TAGCTCAAACCTAAACAAGT+GGG + chr7_3:61163333-61163352 None:intergenic 35.0%
ATAGCTCAAACCTAAACAAG+TGG + chr7_3:61163334-61163353 None:intergenic 35.0%
! AATGAGCTAGTTTATTGCTC+TGG - chr7_3:61163552-61163571 Msa1114350:intron 35.0%
! ATGAGCTAGTTTATTGCTCT+GGG - chr7_3:61163553-61163572 Msa1114350:intron 35.0%
CTTACTTTAACGACCAAACT+AGG + chr7_3:61163633-61163652 None:intergenic 35.0%
TTAGAAGTTTGAAGATGCAG+TGG + chr7_3:61163715-61163734 None:intergenic 35.0%
TCTTGTTAGACAGAGTCATA+AGG + chr7_3:61163833-61163852 None:intergenic 35.0%
TATGACTCTGTCTAACAAGA+AGG - chr7_3:61163833-61163852 Msa1114350:intron 35.0%
TCGATCAATATGATCATGAC+TGG + chr7_3:61163859-61163878 None:intergenic 35.0%
! CAAAAAAGTGGAGGTATATG+TGG - chr7_3:61163961-61163980 Msa1114350:intron 35.0%
CAATGGAATACATTGATACG+TGG - chr7_3:61164153-61164172 Msa1114350:CDS 35.0%
TTTGATCGAGATGTTTGTTC+TGG + chr7_3:61164223-61164242 None:intergenic 35.0%
TGGAATTGACAGGTTAAATC+CGG + chr7_3:61164294-61164313 None:intergenic 35.0%
CTTATTGTCTGTTACATTCG+AGG - chr7_3:61164352-61164371 Msa1114350:CDS 35.0%
AATAAGACTCTCAAGTACAC+CGG + chr7_3:61164378-61164397 None:intergenic 35.0%
!! GTACTTGAGAGTCTTATTTC+TGG - chr7_3:61164380-61164399 Msa1114350:CDS 35.0%
GTTTGCCAAAAAACATTGAG+AGG - chr7_3:61164582-61164601 Msa1114350:CDS 35.0%
!!! GTGATGTTGTTTTCTAACCT+TGG + chr7_3:61164633-61164652 None:intergenic 35.0%
GATATGCACAAACAACACTA+TGG + chr7_3:61164932-61164951 None:intergenic 35.0%
!!! GAATGAAGTTTTTAGCAGTG+TGG + chr7_3:61165007-61165026 None:intergenic 35.0%
! CTCCATAAAGTATCTGTCAT+TGG - chr7_3:61165029-61165048 Msa1114350:intron 35.0%
TCACTATCTTAAGTCGATCA+AGG + chr7_3:61165292-61165311 None:intergenic 35.0%
GAGACTCTTACTTATACTGT+TGG - chr7_3:61165386-61165405 Msa1114350:intron 35.0%
! CTTACTTATACTGTTGGTCT+TGG - chr7_3:61165392-61165411 Msa1114350:intron 35.0%
! GCATTTCTGAAGAGTTGTTA+TGG - chr7_3:61165447-61165466 Msa1114350:intron 35.0%
!! GATAAACTTGCTGCTCAATT+GGG + chr7_3:61165616-61165635 None:intergenic 35.0%
!! TGATAAACTTGCTGCTCAAT+TGG + chr7_3:61165617-61165636 None:intergenic 35.0%
!! GAACTTTATTCGAGTTGTCT+CGG + chr7_3:61165686-61165705 None:intergenic 35.0%
! ATAAAATCGACTCCGATGTG+CGG - chr7_3:61158114-61158133 Msa1114350:exon 40.0%
CGTATGTTTAAACCGCACAT+CGG + chr7_3:61158129-61158148 None:intergenic 40.0%
CGATGTGCGGTTTAAACATA+CGG - chr7_3:61158127-61158146 Msa1114350:exon 40.0%
!! GATTTTGGCGATGTTCAAGT+AGG - chr7_3:61158515-61158534 Msa1114350:CDS 40.0%
AGATTAACCTACGATCACGA+CGG + chr7_3:61158744-61158763 None:intergenic 40.0%
!!! TCTGATTCCTTTTGGTTCAC+AGG - chr7_3:61158786-61158805 Msa1114350:intron 40.0%
CTTGATACCTGTGAACCAAA+AGG + chr7_3:61158796-61158815 None:intergenic 40.0%
CAAAACTTCCTTTCCCACAA+AGG + chr7_3:61158824-61158843 None:intergenic 40.0%
!! AGGAAGTTTTGTGCTTCGAT+TGG - chr7_3:61158833-61158852 Msa1114350:intron 40.0%
!! ACTTCTATTAGCTTTCGCCA+TGG + chr7_3:61158866-61158885 None:intergenic 40.0%
TATGTCTCTACATCCCAATG+TGG - chr7_3:61158895-61158914 Msa1114350:intron 40.0%
TACATCCCAATGTGGTAAAC+TGG - chr7_3:61158903-61158922 Msa1114350:intron 40.0%
ACATCCCAATGTGGTAAACT+GGG - chr7_3:61158904-61158923 Msa1114350:intron 40.0%
TAGATGTTAGGATCAGGCAA+TGG + chr7_3:61159010-61159029 None:intergenic 40.0%
TCGATGTAGATGTTAGGATC+AGG + chr7_3:61159016-61159035 None:intergenic 40.0%
TATCGACCCTGAACTATATC+TGG - chr7_3:61159057-61159076 Msa1114350:CDS 40.0%
CCACATCCAGATATAGTTCA+GGG + chr7_3:61159066-61159085 None:intergenic 40.0%
TCCACATCCAGATATAGTTC+AGG + chr7_3:61159067-61159086 None:intergenic 40.0%
! CTTTTTCTTCTATGTTGCCG+TGG + chr7_3:61159105-61159124 None:intergenic 40.0%
CACGGCAACATAGAAGAAAA+AGG - chr7_3:61159103-61159122 Msa1114350:CDS 40.0%
CAACATAGAAGAAAAAGGCG+AGG - chr7_3:61159108-61159127 Msa1114350:CDS 40.0%
! CTCTTGAGTCAATCCTTTTC+AGG - chr7_3:61159157-61159176 Msa1114350:CDS 40.0%
!! GCAGCATAATTTGGCTCTAA+AGG + chr7_3:61159241-61159260 None:intergenic 40.0%
AAATTATGCTGCTCAGGGAT+GGG - chr7_3:61159249-61159268 Msa1114350:CDS 40.0%
! ATTCTCAAAGGTGGATTCAG+AGG - chr7_3:61159374-61159393 Msa1114350:CDS 40.0%
! TTCTCAAAGGTGGATTCAGA+GGG - chr7_3:61159375-61159394 Msa1114350:CDS 40.0%
TACCAACAAGGAAGAACTAG+CGG - chr7_3:61159427-61159446 Msa1114350:CDS 40.0%
CATGGGATGGATATAACAGA+AGG - chr7_3:61159467-61159486 Msa1114350:CDS 40.0%
AGAGGAAGAGGAAGAAATAG+AGG - chr7_3:61159562-61159581 Msa1114350:CDS 40.0%
CACCACTTAAATCTTCTTGG+AGG - chr7_3:61160027-61160046 Msa1114350:intron 40.0%
TACACTTACATCCGAGTTTG+GGG + chr7_3:61160578-61160597 None:intergenic 40.0%
GTTACACTTACATCCGAGTT+TGG + chr7_3:61160580-61160599 None:intergenic 40.0%
TTAAACTGTGGAGTGTGTGT+TGG + chr7_3:61161191-61161210 None:intergenic 40.0%
!!! AAATTTTTTGGTAGTGGCCG+GGG + chr7_3:61161547-61161566 None:intergenic 40.0%
GTGAGCTTAGCTCAATTGAT+CGG - chr7_3:61161667-61161686 Msa1114350:intron 40.0%
ATGTGAAGAAGTGAGATGTC+GGG + chr7_3:61161730-61161749 None:intergenic 40.0%
TCGTAGTTGTCTGTGAACAT+CGG + chr7_3:61161862-61161881 None:intergenic 40.0%
! CCTAGGAACATTTTATACCC+GGG + chr7_3:61162175-61162194 None:intergenic 40.0%
AAATTTCCCAAGGAAAAGGG+TGG - chr7_3:61162203-61162222 Msa1114350:intron 40.0%
AATTTCCCAAGGAAAAGGGT+GGG - chr7_3:61162204-61162223 Msa1114350:intron 40.0%
! TTATTCCCACCCTTTTCCTT+GGG + chr7_3:61162212-61162231 None:intergenic 40.0%
! TTTATTCCCACCCTTTTCCT+TGG + chr7_3:61162213-61162232 None:intergenic 40.0%
GGACACGAAATGGAATTCAA+GGG + chr7_3:61163037-61163056 None:intergenic 40.0%
TAAATGCCCAGACAACACAA+GGG + chr7_3:61163084-61163103 None:intergenic 40.0%
TAGGTTTGAGCTATGAAGCA+CGG - chr7_3:61163340-61163359 Msa1114350:intron 40.0%
! CTTCATACGGTTTGAGACAT+TGG - chr7_3:61163482-61163501 Msa1114350:intron 40.0%
TGTACAGCAAAGACCTAGTT+AGG - chr7_3:61163925-61163944 Msa1114350:intron 40.0%
GATGTTCTTATGCAACACAG+CGG - chr7_3:61164077-61164096 Msa1114350:CDS 40.0%
ATGTTCTTATGCAACACAGC+GGG - chr7_3:61164078-61164097 Msa1114350:CDS 40.0%
AGAAATCAGGTGGAATTGAC+AGG + chr7_3:61164304-61164323 None:intergenic 40.0%
TCAATTCCACCTGATTTCTG+CGG - chr7_3:61164305-61164324 Msa1114350:CDS 40.0%
!!! CTTTTAAAGCCGCAGAAATC+AGG + chr7_3:61164317-61164336 None:intergenic 40.0%
! AGCCATAAGACTTTGAGAGT+GGG + chr7_3:61164473-61164492 None:intergenic 40.0%
! TAGCCATAAGACTTTGAGAG+TGG + chr7_3:61164474-61164493 None:intergenic 40.0%
GATCTTAGACTCACAGTATC+TGG - chr7_3:61164548-61164567 Msa1114350:CDS 40.0%
ATCACCACTTCTATCTAGCT+TGG - chr7_3:61164773-61164792 Msa1114350:CDS 40.0%
GTTGTTTGTATGCATAGGTC+CGG - chr7_3:61164962-61164981 Msa1114350:intron 40.0%
GAGGAATGATATCTGCATAC+CGG + chr7_3:61164984-61165003 None:intergenic 40.0%
GCTGTGAATTTGAGTGAAAG+AGG - chr7_3:61165054-61165073 Msa1114350:intron 40.0%
TCTTAAGTCGATCAAGGCAA+TGG + chr7_3:61165286-61165305 None:intergenic 40.0%
AGCATGCAATGAGTCTGATA+CGG - chr7_3:61165336-61165355 Msa1114350:intron 40.0%
AGTAAGAGTCTCTAACGATG+TGG + chr7_3:61165378-61165397 None:intergenic 40.0%
TTCAACACCACAGTTCTTCT+TGG - chr7_3:61165535-61165554 Msa1114350:intron 40.0%
AAAGACACCAAGAAGAACTG+TGG + chr7_3:61165545-61165564 None:intergenic 40.0%
!! ACAGTTCTTCTTGGTGTCTT+TGG - chr7_3:61165544-61165563 Msa1114350:intron 40.0%
AGTGAGTCGCTGCAAATGTA+CGG + chr7_3:61157927-61157946 None:intergenic 45.0%
TTGAGTGACTCTTTAGTGCC+AGG - chr7_3:61158714-61158733 Msa1114350:intron 45.0%
GTATCAAGCAGTGCCTTTGT+GGG - chr7_3:61158808-61158827 Msa1114350:intron 45.0%
TCGTCCCAGTTTACCACATT+GGG + chr7_3:61158911-61158930 None:intergenic 45.0%
!!! AGGTTTTGGGCTGAGATCAA+CGG - chr7_3:61158968-61158987 Msa1114350:intron 45.0%
CCCTGAACTATATCTGGATG+TGG - chr7_3:61159063-61159082 Msa1114350:CDS 45.0%
CATAGAAGAAAAAGGCGAGG+AGG - chr7_3:61159111-61159130 Msa1114350:CDS 45.0%
!!! AGTCAATCCTTTTCAGGTCC+AGG - chr7_3:61159163-61159182 Msa1114350:CDS 45.0%
!!! AATCCTTTTCAGGTCCAGGA+TGG - chr7_3:61159167-61159186 Msa1114350:CDS 45.0%
!!! ATCCTTTTCAGGTCCAGGAT+GGG - chr7_3:61159168-61159187 Msa1114350:CDS 45.0%
AGAGCCAAATTATGCTGCTC+AGG - chr7_3:61159243-61159262 Msa1114350:CDS 45.0%
GAGCCAAATTATGCTGCTCA+GGG - chr7_3:61159244-61159263 Msa1114350:CDS 45.0%
CATCCCTGAGCAGCATAATT+TGG + chr7_3:61159250-61159269 None:intergenic 45.0%
CAAATTATGCTGCTCAGGGA+TGG - chr7_3:61159248-61159267 Msa1114350:CDS 45.0%
GTCGGAATGATTCTCAAAGG+TGG - chr7_3:61159365-61159384 Msa1114350:CDS 45.0%
TGGATTCAGAGGGAACACTA+TGG - chr7_3:61159385-61159404 Msa1114350:CDS 45.0%
ATTCAGAGGGAACACTATGG+TGG - chr7_3:61159388-61159407 Msa1114350:CDS 45.0%
ACCAACAAGGAAGAACTAGC+GGG - chr7_3:61159428-61159447 Msa1114350:CDS 45.0%
AACTAGCGGGAGTGGAAATT+GGG - chr7_3:61159441-61159460 Msa1114350:CDS 45.0%
GAGTGGAAATTGGGGAACAT+GGG - chr7_3:61159450-61159469 Msa1114350:CDS 45.0%
ATGTCATGGTCTAAGAACCC+TGG - chr7_3:61159505-61159524 Msa1114350:CDS 45.0%
AGAGGAAGAAATAGAGGACG+AGG - chr7_3:61159568-61159587 Msa1114350:CDS 45.0%
CATCTTCAAACCTGAGTGCA+AGG - chr7_3:61160129-61160148 Msa1114350:CDS 45.0%
ACACTTACATCCGAGTTTGG+GGG + chr7_3:61160577-61160596 None:intergenic 45.0%
TGTGAAGAAGTGAGATGTCG+GGG + chr7_3:61161729-61161748 None:intergenic 45.0%
GATGTTCACAGACAACTACG+AGG - chr7_3:61161861-61161880 Msa1114350:intron 45.0%
CCCGGGTATAAAATGTTCCT+AGG - chr7_3:61162172-61162191 Msa1114350:intron 45.0%
CGGACACGAAATGGAATTCA+AGG + chr7_3:61163038-61163057 None:intergenic 45.0%
CTGCGTGTCCCTATCTTTAT+CGG + chr7_3:61163058-61163077 None:intergenic 45.0%
CAGAAACCCTTGTGTTGTCT+GGG - chr7_3:61163075-61163094 Msa1114350:intron 45.0%
GTAAATGCCCAGACAACACA+AGG + chr7_3:61163085-61163104 None:intergenic 45.0%
GTGTTGTCTGGGCATTTACA+CGG - chr7_3:61163086-61163105 Msa1114350:intron 45.0%
! ATGGGTTGACCCACTTGTTT+AGG - chr7_3:61163321-61163340 Msa1114350:intron 45.0%
TGAGCTATGAAGCACGGATA+CGG - chr7_3:61163346-61163365 Msa1114350:intron 45.0%
TATGAAGCACGGACACTTCT+CGG + chr7_3:61163469-61163488 None:intergenic 45.0%
!! AGAAGTGTCCGTGCTTCATA+CGG - chr7_3:61163469-61163488 Msa1114350:intron 45.0%
GTCTCAAACCGTATGAAGCA+CGG + chr7_3:61163480-61163499 None:intergenic 45.0%
CATCGTCAAACCGAAGTTGT+GGG + chr7_3:61163995-61164014 None:intergenic 45.0%
TCATCGTCAAACCGAAGTTG+TGG + chr7_3:61163996-61164015 None:intergenic 45.0%
! CTTTAGAAGTTACAGGGCCA+GGG + chr7_3:61164049-61164068 None:intergenic 45.0%
! ACTTTAGAAGTTACAGGGCC+AGG + chr7_3:61164050-61164069 None:intergenic 45.0%
TGTTCTTATGCAACACAGCG+GGG - chr7_3:61164079-61164098 Msa1114350:CDS 45.0%
TTAAAGCCGCAGAAATCAGG+TGG + chr7_3:61164314-61164333 None:intergenic 45.0%
TTGTCTGTTACATTCGAGGC+CGG - chr7_3:61164356-61164375 Msa1114350:CDS 45.0%
CTCCCACTCTCAAAGTCTTA+TGG - chr7_3:61164468-61164487 Msa1114350:CDS 45.0%
GATGCCAAGCTAGATAGAAG+TGG + chr7_3:61164780-61164799 None:intergenic 45.0%
! TTCTATCTAGCTTGGCATCG+TGG - chr7_3:61164781-61164800 Msa1114350:CDS 45.0%
!!! GAAGTTTTTAGCAGTGTGGG+AGG + chr7_3:61165003-61165022 None:intergenic 45.0%
!! ACTTAAAAGTGCTCCTCGCT+TGG - chr7_3:61165101-61165120 Msa1114350:intron 45.0%
TCCTCGCTTGGTTGATCTTA+AGG - chr7_3:61165113-61165132 Msa1114350:intron 45.0%
ACCTTAAGATCAACCAAGCG+AGG + chr7_3:61165117-61165136 None:intergenic 45.0%
TTCCAACTCCTCTGAATGCT+CGG + chr7_3:61165255-61165274 None:intergenic 45.0%
TATCTGCTACTGAATAGGGC+TGG - chr7_3:61165653-61165672 Msa1114350:intron 45.0%
!!! TATTTTTACTAATTAATATA+GGG + chr7_3:61160523-61160542 None:intergenic 5.0%
!!! ATATTTTTACTAATTAATAT+AGG + chr7_3:61160524-61160543 None:intergenic 5.0%
!!! TTTGAATAAATTTTATTTTT+TGG + chr7_3:61161091-61161110 None:intergenic 5.0%
!! ATAAACTTATAAAAAATTAA+GGG + chr7_3:61161228-61161247 None:intergenic 5.0%
!! AATAAACTTATAAAAAATTA+AGG + chr7_3:61161229-61161248 None:intergenic 5.0%
!!! AATTTTTTATAAGTTTATTT+TGG - chr7_3:61161230-61161249 Msa1114350:intron 5.0%
GCGACTCACTCTCAACAGTA+AGG - chr7_3:61157937-61157956 Msa1114350:three_prime_UTR 50.0%
GGTATCAAGCAGTGCCTTTG+TGG - chr7_3:61158807-61158826 Msa1114350:intron 50.0%
AAGCAGTGCCTTTGTGGGAA+AGG - chr7_3:61158813-61158832 Msa1114350:intron 50.0%
GTCGTCCCAGTTTACCACAT+TGG + chr7_3:61158912-61158931 None:intergenic 50.0%
TCAGGCAATGGTATGTCGCA+GGG + chr7_3:61158998-61159017 None:intergenic 50.0%
ATCAGGCAATGGTATGTCGC+AGG + chr7_3:61158999-61159018 None:intergenic 50.0%
GAAAGAGAAGCAGTAGCCCA+CGG - chr7_3:61159085-61159104 Msa1114350:CDS 50.0%
!!! TCCTTTTCAGGTCCAGGATG+GGG - chr7_3:61159169-61159188 Msa1114350:CDS 50.0%
AGGATGGGGATCTACTGGAT+GGG - chr7_3:61159183-61159202 Msa1114350:CDS 50.0%
! TCCCGCTAGTTCTTCCTTGT+TGG + chr7_3:61159432-61159451 None:intergenic 50.0%
GAACTAGCGGGAGTGGAAAT+TGG - chr7_3:61159440-61159459 Msa1114350:CDS 50.0%
ACTAGCGGGAGTGGAAATTG+GGG - chr7_3:61159442-61159461 Msa1114350:CDS 50.0%
GGAGTGGAAATTGGGGAACA+TGG - chr7_3:61159449-61159468 Msa1114350:CDS 50.0%
GGAAATTGGGGAACATGGGA+TGG - chr7_3:61159454-61159473 Msa1114350:CDS 50.0%
GGAAGAAATAGAGGACGAGG+AGG - chr7_3:61159571-61159590 Msa1114350:CDS 50.0%
AGAAATAGAGGACGAGGAGG+AGG - chr7_3:61159574-61159593 Msa1114350:CDS 50.0%
! TGGTTTAAGGCCTTGCACTC+AGG + chr7_3:61160142-61160161 None:intergenic 50.0%
!! TATCTAGCTTTCAGGGCCCT+CGG + chr7_3:61160263-61160282 None:intergenic 50.0%
TTACATCCGAGTTTGGGGGT+GGG + chr7_3:61160573-61160592 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - chr7_3:61161485-61161504 Msa1114350:intron 50.0%
CACAGACAACTACGAGGTCT+CGG - chr7_3:61161867-61161886 Msa1114350:intron 50.0%
ACAGACAACTACGAGGTCTC+GGG - chr7_3:61161868-61161887 Msa1114350:intron 50.0%
CGAGGTCTCGGGTTTAAACT+CGG - chr7_3:61161879-61161898 Msa1114350:intron 50.0%
GAGGTCTCGGGTTTAAACTC+GGG - chr7_3:61161880-61161899 Msa1114350:intron 50.0%
GGGTGGGAATAAAGTTCCCA+TGG - chr7_3:61162220-61162239 Msa1114350:intron 50.0%
! ACAGTTAAACGAGGGCGTGT+TGG - chr7_3:61163010-61163029 Msa1114350:intron 50.0%
GCAGAAACCCTTGTGTTGTC+TGG - chr7_3:61163074-61163093 Msa1114350:intron 50.0%
TTGTCTGGGCATTTACACGG+CGG - chr7_3:61163089-61163108 Msa1114350:intron 50.0%
! GTGGGTTGCATGCTAGTGTT+AGG + chr7_3:61163301-61163320 None:intergenic 50.0%
ACACTAGCATGCAACCCACA+TGG - chr7_3:61163302-61163321 Msa1114350:intron 50.0%
CACTAGCATGCAACCCACAT+GGG - chr7_3:61163303-61163322 Msa1114350:intron 50.0%
ACAAGTGGGTCAACCCATGT+GGG + chr7_3:61163319-61163338 None:intergenic 50.0%
AACAAGTGGGTCAACCCATG+TGG + chr7_3:61163320-61163339 None:intergenic 50.0%
! GTATCGACATGTCCGACACA+GGG - chr7_3:61163435-61163454 Msa1114350:intron 50.0%
ACATGTCCGACACAGGGATA+TGG - chr7_3:61163441-61163460 Msa1114350:intron 50.0%
TCGGATCCATATCCCTGTGT+CGG + chr7_3:61163450-61163469 None:intergenic 50.0%
! CTTTGCTGTACAAGCGTGCT+AGG + chr7_3:61163917-61163936 None:intergenic 50.0%
GTCAAACCGAAGTTGTGGGA+CGG + chr7_3:61163991-61164010 None:intergenic 50.0%
TACGAGAATCTCGATGACCC+TGG - chr7_3:61164029-61164048 Msa1114350:CDS 50.0%
! CGTGGATCCCTATTTTGTCG+AGG - chr7_3:61164171-61164190 Msa1114350:CDS 50.0%
CTGTCAGCCGTACAATACCA+AGG - chr7_3:61164613-61164632 Msa1114350:CDS 50.0%
TCCAACTCCTCTGAATGCTC+GGG + chr7_3:61165254-61165273 None:intergenic 50.0%
CTTCGATTGGCGCAGTTCCA+TGG - chr7_3:61158846-61158865 Msa1114350:intron 55.0%
GGACGACTCTGCTGTCAAAG+AGG - chr7_3:61158925-61158944 Msa1114350:intron 55.0%
GCAATGGTATGTCGCAGGGA+AGG + chr7_3:61158994-61159013 None:intergenic 55.0%
TCCCCATCCTGGACCTGAAA+AGG + chr7_3:61159173-61159192 None:intergenic 55.0%
CATCCAGTAGATCCCCATCC+TGG + chr7_3:61159184-61159203 None:intergenic 55.0%
CAGGATGGGGATCTACTGGA+TGG - chr7_3:61159182-61159201 Msa1114350:CDS 55.0%
GGATGGGGATCTACTGGATG+GGG - chr7_3:61159184-61159203 Msa1114350:CDS 55.0%
GATGGGGATCTACTGGATGG+GGG - chr7_3:61159185-61159204 Msa1114350:CDS 55.0%
ATGGGGATCTACTGGATGGG+GGG - chr7_3:61159186-61159205 Msa1114350:CDS 55.0%
CAAGGAAGAACTAGCGGGAG+TGG - chr7_3:61159433-61159452 Msa1114350:CDS 55.0%
AGGACGAGGAGGAGGAAGAA+GGG - chr7_3:61159582-61159601 Msa1114350:CDS 55.0%
AGGTAGCTACTCCCAGTGCA+TGG - chr7_3:61159626-61159645 Msa1114350:CDS 55.0%
!! ACTTGACGAAGAGCACTCCG+AGG - chr7_3:61160243-61160262 Msa1114350:intron 55.0%
!! CTTGACGAAGAGCACTCCGA+GGG - chr7_3:61160244-61160263 Msa1114350:intron 55.0%
AACAACCCCACCCCCAAACT+CGG - chr7_3:61160564-61160583 Msa1114350:intron 55.0%
TACATCCGAGTTTGGGGGTG+GGG + chr7_3:61160572-61160591 None:intergenic 55.0%
CTTACATCCGAGTTTGGGGG+TGG + chr7_3:61160574-61160593 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr7_3:61161484-61161503 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr7_3:61161481-61161500 Msa1114350:intron 55.0%
GTCTCGGGTTTAAACTCGGG+TGG - chr7_3:61161883-61161902 Msa1114350:intron 55.0%
TCGGGTTTAAACTCGGGTGG+AGG - chr7_3:61161886-61161905 Msa1114350:intron 55.0%
AGCAGAGAGTGAGACAGCTC+CGG + chr7_3:61163144-61163163 None:intergenic 55.0%
! CGTATCGACATGTCCGACAC+AGG - chr7_3:61163434-61163453 Msa1114350:intron 55.0%
AAACCGAAGTTGTGGGACGG+AGG + chr7_3:61163988-61164007 None:intergenic 55.0%
TACGATCACGACGGATCGCC+TGG + chr7_3:61158735-61158754 None:intergenic 60.0%
AGGCGATCCGTCGTGATCGT+AGG - chr7_3:61158734-61158753 Msa1114350:intron 60.0%
GGTCCAGGATGGGGATCTAC+TGG - chr7_3:61159178-61159197 Msa1114350:CDS 60.0%
GAGGACGAGGAGGAGGAAGA+AGG - chr7_3:61159581-61159600 Msa1114350:CDS 60.0%
GAGTTTGGGGGTGGGGTTGT+TGG + chr7_3:61160565-61160584 None:intergenic 60.0%
AAGGTCCGGGGTTCAAACCC+CGG - chr7_3:61161527-61161546 Msa1114350:intron 60.0%
!! GTGGTGGCGGAGCTGCAATA+GGG + chr7_3:61163115-61163134 None:intergenic 60.0%
AGTGAGACAGCTCCGGCGAT+GGG + chr7_3:61163137-61163156 None:intergenic 60.0%
GGACCTCCGTCCCACAACTT+CGG - chr7_3:61163982-61164001 Msa1114350:intron 60.0%
GCCCGAGCATTCAGAGGAGT+TGG - chr7_3:61165250-61165269 Msa1114350:intron 60.0%
AGTGGCCGGGGTTTGAACCC+CGG + chr7_3:61161535-61161554 None:intergenic 65.0%
!! GGTGGTGGCGGAGCTGCAAT+AGG + chr7_3:61163116-61163135 None:intergenic 65.0%
GAGTGAGACAGCTCCGGCGA+TGG + chr7_3:61163138-61163157 None:intergenic 65.0%
GCAAGCGCCCGAGCATTCAG+AGG - chr7_3:61165244-61165263 Msa1114350:intron 65.0%
ACAGCTCCGGCGATGGGTGG+TGG + chr7_3:61163131-61163150 None:intergenic 70.0%
GAGACAGCTCCGGCGATGGG+TGG + chr7_3:61163134-61163153 None:intergenic 70.0%
GCTCCGCCACCACCCATCGC+CGG - chr7_3:61163122-61163141 Msa1114350:intron 75.0%
! GCTCCGGCGATGGGTGGTGG+CGG + chr7_3:61163128-61163147 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 61157918 61165728 61157918 ID=Msa1114350;Name=Msa1114350
chr7_3 mRNA 61157918 61165728 61157918 ID=Msa1114350-mRNA-1;Parent=Msa1114350;Name=Msa1114350-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.33|0.42|0.71|1|1|7|214|777
chr7_3 exon 61157918 61158425 61157918 ID=Msa1114350-mRNA-1:exon:13824;Parent=Msa1114350-mRNA-1
chr7_3 exon 61158512 61158667 61158512 ID=Msa1114350-mRNA-1:exon:13823;Parent=Msa1114350-mRNA-1
chr7_3 exon 61159012 61159819 61159012 ID=Msa1114350-mRNA-1:exon:13822;Parent=Msa1114350-mRNA-1
chr7_3 exon 61160072 61160190 61160072 ID=Msa1114350-mRNA-1:exon:13821;Parent=Msa1114350-mRNA-1
chr7_3 exon 61160483 61160578 61160483 ID=Msa1114350-mRNA-1:exon:13820;Parent=Msa1114350-mRNA-1
chr7_3 exon 61164019 61164838 61164019 ID=Msa1114350-mRNA-1:exon:13819;Parent=Msa1114350-mRNA-1
chr7_3 exon 61165688 61165728 61165688 ID=Msa1114350-mRNA-1:exon:13818;Parent=Msa1114350-mRNA-1
chr7_3 CDS 61165688 61165728 61165688 ID=Msa1114350-mRNA-1:cds;Parent=Msa1114350-mRNA-1
chr7_3 CDS 61164019 61164838 61164019 ID=Msa1114350-mRNA-1:cds;Parent=Msa1114350-mRNA-1
chr7_3 CDS 61160483 61160578 61160483 ID=Msa1114350-mRNA-1:cds;Parent=Msa1114350-mRNA-1
chr7_3 CDS 61160072 61160190 61160072 ID=Msa1114350-mRNA-1:cds;Parent=Msa1114350-mRNA-1
chr7_3 CDS 61159012 61159819 61159012 ID=Msa1114350-mRNA-1:cds;Parent=Msa1114350-mRNA-1
chr7_3 CDS 61158512 61158667 61158512 ID=Msa1114350-mRNA-1:cds;Parent=Msa1114350-mRNA-1
chr7_3 CDS 61158132 61158425 61158132 ID=Msa1114350-mRNA-1:cds;Parent=Msa1114350-mRNA-1
chr7_3 three_prime_UTR 61157918 61158131 61157918 ID=Msa1114350-mRNA-1:three_prime_utr;Parent=Msa1114350-mRNA-1
Gene Sequence

>Msa1114350

ATGGCGCCGTACATTTGCAGCGACTCACTCTCAACAGTAAGGTATCAAGCAGTGCCTTTGTGGGAAAGGAAGTTTTGTGCTTCGATTGGCGCAGTTCCATGGCGAAAGCTAATAGAAGTCAAGAGGTATATGTCTCTACATCCCAATGTGGTAAACTGGGACGACTCTGCTGTCAAAGAGGCATTTGACAATGCAAAAAGCAGGTTTTGGGCTGAGATCAACGGCCTTCCCTGCGACATACCATTGCCTGATCCTAACATCTACATCGATGATGTAGATTGGAATGCAACTATCGACCCTGAACTATATCTGGATGTGGAAAGAGAAGCAGTAGCCCACGGCAACATAGAAGAAAAAGGCGAGGAGGCCGTGATTCTCAGTAGCTCTTTTCTCTTGAGTCAATCCTTTTCAGGTCCAGGATGGGGATCTACTGGATGGGGGGACGAAGAAGAAAAAGAAGAAGCAATAAAGCCTTTAGAGCCAAATTATGCTGCTCAGGGATGGGAATCAAATCAACATGAAAATAATGAAACAAACTCTTGGGAACAGTATCTTGCTCCTATTGATGAACATCCAAAAGAATATGGTTGGCAAAATAGTCGGAATGATTCTCAAAGGTGGATTCAGAGGGAACACTATGGTGGTGACTTGCATAACAAGTACCAACAAGGAAGAACTAGCGGGAGTGGAAATTGGGGAACATGGGATGGATATAACAGAAGGAGAGAAGAAAACAACATGTCATGGTCTAAGAACCCTGGATATCATTATGGCAATAATGAGTATCAGATGAATAGAGGAAGAGGAAGAAATAGAGGACGAGGAGGAGGAAGAAGGGTAAATTTTGCTTATACGGACAAGGGACACGCAGAAACCCTTGTGTTGTCTGGGCATTTACACGGCGGCCCTATTGCAGCTCCGCCACCACCCATCGCCGGAGCTGTCTCACTCTCTGCTGGATATGGATCCGAGAAGTGTCCGTGCTTCATACGGTTTGAGACATTGGAATGTGCTCCTCTTATAGTCTCAATTTTGAATCCCGGTGTTAATTTTAATGAGCTAGTTTATTGCTCTGGTTACCTTATGACTCTGTCTAACAAGAAGGCCAGTCATGATCATATTGATCGAATCAGTGACTTACCATGTAATGTTATTGATGACATCCTAGCACGCTTGTACAGCAAAGACCTAGTTAGGACTAGTATTTTGTCAAAAAAGTGGAGGTATATGTGGACCTCCGTCCCACAACTTCGGTTTGACGATGACTTTTTTGATGAGTACGAGAATCTCGATGACCCTGGCCCTGTAACTTCTAAAGTTATCACAGATGTTCTTATGCAACACAGCGGGGTGATGCATAAGTTTCATCTTTACGTACCTTATGACTACAATTTCAAGATCTCAATGGAATACATTGATACGTGGATCCCTATTTTGTCGAGGAGTATTAAACATCTCGAGCTTGTGAGCCAGAACAAACATCTCGATCAAATGCCATACATTGTCTTCTCTTGTAAGGAATTGACATTCTTTACATTTGCCGGATTTAACCTGTCAATTCCACCTGATTTCTGCGGCTTTAAAAGATTGCTTAATCTTCACTTATTGTCTGTTACATTCGAGGCCGGTGTACTTGAGAGTCTTATTTCTGGTTGTCCGTTACTTCAAACGCTCAATATTGATGATTGTTGTGGTCCTGAATATTTTGAATTTGATGCTCCCACTCTCAAAGTCTTATGGCTAGATTTTGTTAAAGATATAAAGTCAATTTGTCTCAAGAAAGCAAAGAATCTGATTGATCTTAGACTCACAGTATCTGGTTTGATCAAAAGTTTGCCAAAAAACATTGAGAGGATTTCTATCTGTCAGCCGTACAATACCAAGGTCCGGTATGCAGATATCATTCCTCCCACACTGCTAAAAACTTCATTCAGCTCCATAAAGTATCTGTCATTGGATGCTGTGAATTTGAGTGAAAGAGGAGAACTTTTGCATATTGTTAGTGTACTTAAAAGTGCTCCTCGCTTGGTTGATCTTAAGTGTTACAGCTACGTAGATATTACGCAAGCGCCCGAGCATTCAGAGGAGTTGGAATGCAGTAGCCATTGCCTTGATCGACTTAAGATAGTGAATATCAACTTTATATTTAGCTCTCAGCATGCAATGAGTCTGATACGGTTCATACTTGCAAATTCCACATCGTTAGAGACTCTTACTTATACTGTTGGTCTTGGTTTTGAGAAATTAGATGCAGCTATGTTGTTAAGCATTTCTGAAGAGTTGTTATGGATGAAACGAGCATCACAAAGCGCGCATGTCAAGTTCCTTCATTGA
Protein sequence

>Msa1114350

MAPYICSDSLSTVRYQAVPLWERKFCASIGAVPWRKLIEVKRYMSLHPNVVNWDDSAVKEAFDNAKSRFWAEINGLPCDIPLPDPNIYIDDVDWNATIDPELYLDVEREAVAHGNIEEKGEEAVILSSSFLLSQSFSGPGWGSTGWGDEEEKEEAIKPLEPNYAAQGWESNQHENNETNSWEQYLAPIDEHPKEYGWQNSRNDSQRWIQREHYGGDLHNKYQQGRTSGSGNWGTWDGYNRRREENNMSWSKNPGYHYGNNEYQMNRGRGRNRGRGGGRRVNFAYTDKGHAETLVLSGHLHGGPIAAPPPPIAGAVSLSAGYGSEKCPCFIRFETLECAPLIVSILNPGVNFNELVYCSGYLMTLSNKKASHDHIDRISDLPCNVIDDILARLYSKDLVRTSILSKKWRYMWTSVPQLRFDDDFFDEYENLDDPGPVTSKVITDVLMQHSGVMHKFHLYVPYDYNFKISMEYIDTWIPILSRSIKHLELVSQNKHLDQMPYIVFSCKELTFFTFAGFNLSIPPDFCGFKRLLNLHLLSVTFEAGVLESLISGCPLLQTLNIDDCCGPEYFEFDAPTLKVLWLDFVKDIKSICLKKAKNLIDLRLTVSGLIKSLPKNIERISICQPYNTKVRYADIIPPTLLKTSFSSIKYLSLDAVNLSERGELLHIVSVLKSAPRLVDLKCYSYVDITQAPEHSEELECSSHCLDRLKIVNINFIFSSQHAMSLIRFILANSTSLETLTYTVGLGFEKLDAAMLLSISEELLWMKRASQSAHVKFLH*