AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1233560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1233560 MtrunA17_Chr8g0342891 94.425 861 46 1 1 859 1 861 0.0 1695
Msa1233560 MtrunA17_Chr8g0342921 81.977 860 148 3 6 859 11 869 0.0 1484
Msa1233560 MtrunA17_Chr8g0342971 79.930 862 167 3 4 859 9 870 0.0 1459
Msa1233560 MtrunA17_Chr8g0342951 80.300 868 162 2 1 859 1 868 0.0 1451
Msa1233560 MtrunA17_Chr8g0344211 77.650 868 185 2 1 859 1 868 0.0 1429
Msa1233560 MtrunA17_Chr8g0343011 77.126 870 183 3 1 859 1 865 0.0 1409
Msa1233560 MtrunA17_Chr8g0342931 85.200 750 111 0 110 859 1 750 0.0 1357
Msa1233560 MtrunA17_Chr8g0342901 76.736 864 152 8 4 859 6 828 0.0 1342
Msa1233560 MtrunA17_Chr2g0329911 68.476 866 261 5 1 859 1 861 0.0 1251
Msa1233560 MtrunA17_Chr8g0342881 67.213 854 275 2 7 859 7 856 0.0 1228
Msa1233560 MtrunA17_Chr2g0329901 64.452 858 300 3 4 859 9 863 0.0 1182
Msa1233560 MtrunA17_Chr5g0406871 63.751 869 300 7 1 859 4 867 0.0 1170
Msa1233560 MtrunA17_Chr8g0343021 61.707 867 321 7 1 859 1 864 0.0 1143
Msa1233560 MtrunA17_Chr8g0343031 61.993 863 316 6 5 859 7 865 0.0 1140
Msa1233560 MtrunA17_Chr3g0120071 61.189 858 327 5 4 859 5 858 0.0 1124
Msa1233560 MtrunA17_Chr8g0342991 63.341 862 258 10 1 859 1 807 0.0 1110
Msa1233560 MtrunA17_Chr8g0343001 62.602 861 266 8 1 859 1 807 0.0 1106
Msa1233560 MtrunA17_Chr8g0342981 62.409 822 264 10 53 859 32 823 0.0 1046
Msa1233560 MtrunA17_Chr1g0191921 58.005 862 332 8 8 859 17 858 0.0 1007
Msa1233560 MtrunA17_Chr7g0272791 56.315 863 345 9 10 859 24 867 0.0 991
Msa1233560 MtrunA17_Chr1g0205611 55.363 867 351 9 10 859 9 856 0.0 987
Msa1233560 MtrunA17_Chr8g0344201 44.945 821 435 11 48 858 113 926 0.0 714
Msa1233560 MtrunA17_Chr8g0344241 81.772 395 72 0 465 859 67 461 0.0 697
Msa1233560 MtrunA17_Chr8g0344241 70.000 60 18 0 285 344 9 68 7.90e-19 90.5
Msa1233560 MtrunA17_Chr3g0118651 42.874 828 431 15 52 859 98 903 0.0 644
Msa1233560 MtrunA17_Chr8g0377101 41.869 824 444 15 55 859 109 916 0.0 633
Msa1233560 MtrunA17_Chr3g0118641 43.557 776 417 13 96 859 136 902 0.0 629
Msa1233560 MtrunA17_Chr4g0047281 42.170 811 429 13 58 858 114 894 0.0 627
Msa1233560 MtrunA17_Chr8g0338451 40.340 823 446 12 47 842 46 850 0.0 625
Msa1233560 MtrunA17_Chr4g0033171 43.785 724 380 13 150 859 15 725 0.0 601
Msa1233560 MtrunA17_Chr3g0118621 41.531 862 459 17 19 859 28 865 0.0 597
Msa1233560 MtrunA17_Chr6g0471951 39.489 509 262 7 313 817 11 477 1.43e-125 387
Msa1233560 MtrunA17_Chr7g0218231 63.248 117 42 1 513 628 16 132 4.77e-43 152
Msa1233560 MtrunA17_Chr6g0468081 59.551 89 35 1 541 628 1 89 1.35e-27 107
Msa1233560 MtrunA17_Chr4g0047271 39.560 91 55 0 768 858 1 91 1.78e-16 75.5
Msa1233560 MtrunA17_Chr3g0137991 39.370 127 57 4 735 859 1 109 1.41e-15 73.6
Msa1233560 MtrunA17_Chr2g0277191 51.786 56 27 0 732 787 58 113 3.54e-13 67.0
Msa1233560 MtrunA17_Chr7g0272781 44.444 63 34 1 751 813 8 69 1.65e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1233560 AT1G55020.1 54.157 866 360 10 7 859 18 859 0.0 976
Msa1233560 AT3G22400.1 54.348 874 359 12 7 859 32 886 0.0 966
Msa1233560 AT1G72520.1 43.484 821 447 10 48 859 114 926 0.0 706
Msa1233560 AT1G17420.1 43.204 824 444 11 48 859 108 919 0.0 696
Msa1233560 AT3G45140.1 41.893 845 446 19 33 859 79 896 0.0 626
Msa1233560 AT3G45140.2 43.620 768 399 17 109 859 4 754 0.0 613
Msa1233560 AT1G67560.1 40.992 827 460 15 48 859 104 917 0.0 607

Find 225 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGGAAGAGCTTATTGTTTA+AGG 0.127285 8_2:+10350526 None:intergenic
CTTCATGCAGCTGTTAATTT+TGG 0.155837 8_2:-10346620 Msa1233560:CDS
ATTCTGAACTCCAAGCATTT+TGG 0.213611 8_2:-10346760 Msa1233560:CDS
CTATAATGGTCAAGTCAATT+AGG 0.235454 8_2:+10346453 None:intergenic
GTTACCTCCGCACCGATTCT+AGG 0.266335 8_2:-10349493 Msa1233560:CDS
TAGTCCAAACTCTTACTTTA+GGG 0.267766 8_2:-10350482 Msa1233560:five_prime_UTR
TCACTGTCCCCTTCACCTTT+TGG 0.268716 8_2:+10350133 None:intergenic
CTGCTGATGGATTAGAGATA+TGG 0.279575 8_2:-10346853 Msa1233560:CDS
AAATGCACGCACATCATTAA+AGG 0.282585 8_2:+10348481 None:intergenic
TGCCTATCTAGCTTGCTCTT+TGG 0.284977 8_2:+10348023 None:intergenic
TTGTGCACTTTCTGCCGTTC+TGG 0.287920 8_2:+10350201 None:intergenic
GTTTGATTGTTATAGTGTTT+TGG 0.292421 8_2:-10346067 Msa1233560:three_prime_UTR
ATAGTCCAAACTCTTACTTT+AGG 0.294163 8_2:-10350483 Msa1233560:five_prime_UTR
AATAGTATCTCCATCTAAAA+AGG 0.294205 8_2:-10346182 Msa1233560:exon
TTAGAGGCTTTCAAGAGATT+TGG 0.301087 8_2:-10346347 Msa1233560:CDS
AGCTTAGCTCGTCCCGTTAT+TGG 0.301482 8_2:-10349009 Msa1233560:CDS
AATTATACAACTAGTAGAAT+TGG 0.320396 8_2:+10350567 None:intergenic
AGAGAATTGAAGGTGATCTT+TGG 0.324769 8_2:-10346388 Msa1233560:CDS
GCTTCAACACCTTCACTTGC+AGG 0.327952 8_2:+10347603 None:intergenic
TTCTGATTCACAACCATTAG+AGG 0.338910 8_2:-10346363 Msa1233560:CDS
GGACTATATATCTTATGTTT+CGG 0.355812 8_2:+10350499 None:intergenic
TGATACCTACGGTTCAATCT+TGG 0.356398 8_2:-10350010 Msa1233560:CDS
ACAGGTGGATTCAAGGTTCT+TGG 0.357260 8_2:-10350054 Msa1233560:CDS
TCACATTATCAAAAGAATTC+AGG 0.358460 8_2:-10348179 Msa1233560:intron
TGCTGTATTATATAAGGATT+GGG 0.361705 8_2:-10347218 Msa1233560:CDS
ATCTAGAGGTGTGGCTGTTA+AGG 0.363884 8_2:-10346927 Msa1233560:intron
ACCCTCATTAGTTACATTGA+TGG 0.364297 8_2:-10350359 Msa1233560:five_prime_UTR
ATTGTCTGCTGTATTATATA+AGG 0.364894 8_2:-10347224 Msa1233560:CDS
CTTCCAAGAGATGAATCATT+TGG 0.368825 8_2:-10348617 Msa1233560:CDS
TCCTGATTCAATCCGCTGTT+TGG 0.372274 8_2:+10350662 None:intergenic
TCTTGTCTATAGTAGACTAA+TGG 0.377121 8_2:+10349138 None:intergenic
AGTTCCTTGAACAATGGTAT+AGG 0.379627 8_2:+10348410 None:intergenic
TGAGTTGCAAACAAAGTTGA+TGG 0.379958 8_2:+10349330 None:intergenic
CATTCATCATAGCAACAAAT+AGG 0.380660 8_2:-10347393 Msa1233560:CDS
ACACTTGCACCACCCTCATA+TGG 0.380883 8_2:-10346655 Msa1233560:CDS
GATACCTACGGTTCAATCTT+GGG 0.388084 8_2:-10350009 Msa1233560:CDS
TGACCAAATGATTCATCTCT+TGG 0.388343 8_2:+10348614 None:intergenic
GGAGCCCTAAAGTAAGAGTT+TGG 0.389028 8_2:+10350478 None:intergenic
GGAACAATGATGAGACTCTA+AGG 0.391890 8_2:-10346286 Msa1233560:CDS
CAAGAGATTTGGAACAAAGT+TGG 0.394650 8_2:-10346336 Msa1233560:CDS
CATGATAGGAAGACATGATA+TGG 0.396482 8_2:+10350626 None:intergenic
CTGCTGTATTATATAAGGAT+TGG 0.398026 8_2:-10347219 Msa1233560:CDS
ATCAAGTATGTACAATTTGT+TGG 0.404374 8_2:+10347803 None:intergenic
TTTAGGTGGTGGAAACTTAA+GGG 0.405519 8_2:+10348364 None:intergenic
GGAAAGTAAATATCACTAAC+AGG 0.406097 8_2:+10347624 None:intergenic
CAAGTTCTTTCCAAAATGCT+TGG 0.406902 8_2:+10346750 None:intergenic
TATAATGGTCAAGTCAATTA+GGG 0.409856 8_2:+10346454 None:intergenic
GAAGGATAAAGCAAAGTATA+CGG 0.412453 8_2:+10346239 None:intergenic
GCCCGTTTGGTGCACATGAT+AGG 0.414591 8_2:+10350612 None:intergenic
GAGACTCTAAGGAATCGATA+TGG 0.416853 8_2:-10346275 Msa1233560:CDS
GTCAATCCTTCCTCACTTGA+AGG 0.416919 8_2:+10346221 None:intergenic
AATCTCTTGAAAGCCTCTAA+TGG 0.418384 8_2:+10346350 None:intergenic
CATCCTCAGGCTGATAGCTT+TGG 0.418449 8_2:-10347648 Msa1233560:CDS
ACCAAACAGCGGATTGAATC+AGG 0.418943 8_2:-10350663 Msa1233560:five_prime_UTR
TATGTACCTTAGGGCCCGTT+TGG 0.419978 8_2:+10350599 None:intergenic
AAAGTATACGGCATCTTAAC+CGG 0.420728 8_2:+10346251 None:intergenic
CTATTTGTTGCTATGATGAA+TGG 0.420998 8_2:+10347394 None:intergenic
AAGCTATCAGCCTGAGGATG+TGG 0.423011 8_2:+10347651 None:intergenic
CTATCTAGCTTGCTCTTTGG+TGG 0.425209 8_2:+10348026 None:intergenic
AAAGTGCACAACAAATTTGC+TGG 0.426953 8_2:-10350189 Msa1233560:five_prime_UTR
GACCTAGGCTGTTGACGTCT+TGG 0.427643 8_2:-10350334 Msa1233560:five_prime_UTR
CCACCACCTAAAATCATTCA+AGG 0.428002 8_2:-10348353 Msa1233560:intron
GATAGTGACATGGGAATTCC+AGG 0.428040 8_2:-10349433 Msa1233560:CDS
CACCAAAGAGCAAGCTAGAT+AGG 0.433954 8_2:-10348025 Msa1233560:CDS
TCAACTTTGTTTGCAACTCA+TGG 0.435514 8_2:-10349327 Msa1233560:CDS
AAGTTGATGGTTCCATGGTT+AGG 0.438897 8_2:+10349343 None:intergenic
TGATGGAACTTTGAAGCCAT+TGG 0.439270 8_2:-10347691 Msa1233560:CDS
AGAAAGTGGAAAAGGTAAAG+TGG 0.439449 8_2:-10349542 Msa1233560:CDS
AAGGTGTTGAAGCTTCAATT+TGG 0.440030 8_2:-10347593 Msa1233560:CDS
TAGCCCTATACCATTGTTCA+AGG 0.440814 8_2:-10348414 Msa1233560:CDS
AGTTTATAACCTTTCTTAGC+TGG 0.442387 8_2:+10348937 None:intergenic
GTTCCTTGAACAATGGTATA+GGG 0.442713 8_2:+10348411 None:intergenic
TCTTGACAAGACCTCTATAA+TGG 0.447317 8_2:+10346439 None:intergenic
TCCTATCATGTGCACCAAAC+GGG 0.447922 8_2:-10350613 Msa1233560:five_prime_UTR
TGGGCCGTTCAGTGGCTCTC+AGG 0.448781 8_2:-10349990 Msa1233560:CDS
TATTGAGAAGACGTTCTTGA+TGG 0.451460 8_2:-10347263 Msa1233560:CDS
TCTAATCCATCAGCAGCAAA+AGG 0.452451 8_2:+10346860 None:intergenic
TTCTCAATATAAAATGCTCC+TGG 0.455625 8_2:+10349415 None:intergenic
TTTACAAGAGAGATGATTGC+TGG 0.455862 8_2:-10348211 Msa1233560:CDS
AAATATCACAGGTGGATTCA+AGG 0.457407 8_2:-10350061 Msa1233560:CDS
CTTAGAAAGCTCATCATACT+CGG 0.462104 8_2:+10346523 None:intergenic
TAATAACATGACCATGGATA+GGG 0.462761 8_2:+10346103 None:intergenic
CGGCCTTCGCCTTCTGATAG+AGG 0.462912 8_2:-10346888 Msa1233560:CDS
AATAGCGACTTGCAAGCCAC+TGG 0.468428 8_2:-10350239 Msa1233560:five_prime_UTR
ATTATACAACTAGTAGAATT+GGG 0.474115 8_2:+10350568 None:intergenic
AAAGCTGCATTTGAAATCAA+TGG 0.475603 8_2:+10345993 None:intergenic
ATGACCATGGATAGGGGTTG+AGG 0.475928 8_2:+10346110 None:intergenic
GGAAGTAAAAGCTTATGAAT+AGG 0.477117 8_2:+10347352 None:intergenic
TTCCTATCATGTGCACCAAA+CGG 0.480523 8_2:-10350614 Msa1233560:five_prime_UTR
GGACAGGTAAACGTGAAGAA+TGG 0.481824 8_2:-10349089 Msa1233560:CDS
TAGTAAGTGTTGCAAGTCAT+GGG 0.482475 8_2:+10350304 None:intergenic
TGCTGATGGATTAGAGATAT+GGG 0.482914 8_2:-10346852 Msa1233560:CDS
TTCATTTCACAGAAGCCAAA+AGG 0.484383 8_2:-10350148 Msa1233560:CDS
CTGAAGACTTTACGAGGAGA+TGG 0.485246 8_2:-10349111 Msa1233560:CDS
TGGAAAGAACTTGTAGAGGT+TGG 0.486789 8_2:-10346740 Msa1233560:CDS
CACTGTCCAGCTCCTAGAAT+CGG 0.493765 8_2:+10349481 None:intergenic
GTGTTGGATCCTCCAATAAC+GGG 0.494877 8_2:+10348997 None:intergenic
CGAAGGCCGTGTGGGGAAGT+AGG 0.495559 8_2:+10346902 None:intergenic
AACCATCAATGTAACTAATG+AGG 0.497859 8_2:+10350357 None:intergenic
GCTAAGCAGCCCACATCCTC+AGG 0.499529 8_2:-10347661 Msa1233560:CDS
TTAGCTCGTCCCGTTATTGG+AGG 0.499661 8_2:-10349006 Msa1233560:CDS
ATGTGGGCTGCTTAGCTCAA+TGG 0.499826 8_2:+10347668 None:intergenic
TTGAAATCAATGGTCTAGAA+TGG 0.501959 8_2:+10346003 None:intergenic
TTCAATCTTGGGCCGTTCAG+TGG 0.504725 8_2:-10349998 Msa1233560:CDS
CTTTATCCTTCAAGTGAGGA+AGG 0.508215 8_2:-10346227 Msa1233560:CDS
TGCCTAATGATCTACTCAAA+AGG 0.508255 8_2:-10347177 Msa1233560:intron
CTGCTTAGCTCAATGGCCAA+TGG 0.509548 8_2:+10347675 None:intergenic
ATAGTAAGTGTTGCAAGTCA+TGG 0.511373 8_2:+10350303 None:intergenic
GACAGGTAAACGTGAAGAAT+GGG 0.514304 8_2:-10349088 Msa1233560:CDS
TCATTAAAGGTGTTAAACTC+TGG 0.514744 8_2:+10348494 None:intergenic
GATATCAACGCCCTCACCGC+TGG 0.515402 8_2:-10350087 Msa1233560:CDS
AATAAATGCAGCTGATACAA+AGG 0.518442 8_2:-10347748 Msa1233560:CDS
TACCTCGGACAGAGAATTGA+AGG 0.519761 8_2:-10346398 Msa1233560:CDS
AATGGAGCTGGTGTTTCACT+TGG 0.519813 8_2:+10349156 None:intergenic
GGTGTTGGATCCTCCAATAA+CGG 0.521313 8_2:+10348996 None:intergenic
AAACAAAGTTGATGGTTCCA+TGG 0.521970 8_2:+10349338 None:intergenic
AATTGACTTGACCATTATAG+AGG 0.522463 8_2:-10346450 Msa1233560:CDS
TGACCATGGATAGGGGTTGA+GGG 0.524941 8_2:+10346111 None:intergenic
AGAAGATTAATGCCTAAGAA+AGG 0.525519 8_2:-10346551 Msa1233560:CDS
GATATTTAAACCAGCGGTGA+GGG 0.525980 8_2:+10350077 None:intergenic
TATATTGAGAATTTCATGCT+AGG 0.525987 8_2:-10349403 Msa1233560:CDS
ATATTTGTAGAAAGTGGAAA+AGG 0.528541 8_2:-10349550 Msa1233560:intron
GTGCTGAAGCAATCCATATG+AGG 0.530017 8_2:+10346642 None:intergenic
TGCACTTGCAAGGAGTGTCT+TGG 0.531139 8_2:-10347302 Msa1233560:CDS
CTGAGGAGTTCCTTGAACAA+TGG 0.531953 8_2:+10348404 None:intergenic
GGAAAGAGATCGTTTCTTGA+AGG 0.532072 8_2:-10349520 Msa1233560:CDS
TATCTTATGTTTCGGTTCAA+CGG 0.532427 8_2:+10350507 None:intergenic
ATAATAACATGACCATGGAT+AGG 0.536860 8_2:+10346102 None:intergenic
TCACAGAAGCCAAAAGGTGA+AGG 0.539609 8_2:-10350142 Msa1233560:CDS
TTTCTTAGCTGGTTTCCTGC+CGG 0.541247 8_2:+10348948 None:intergenic
GGACAGTGATATTGATGCAT+AGG 0.541977 8_2:-10350119 Msa1233560:CDS
GAAAGTGGAAAAGGTAAAGT+GGG 0.542323 8_2:-10349541 Msa1233560:CDS
TATGGGCTGTGCTTAAGTCA+TGG 0.547341 8_2:-10346835 Msa1233560:CDS
AGAACAGCTTCAACAAAACA+TGG 0.547388 8_2:-10347967 Msa1233560:CDS
TTAGAAAGCTCATCATACTC+GGG 0.548951 8_2:+10346524 None:intergenic
GCTTTCTAAGAACTATCAAA+AGG 0.551115 8_2:-10346510 Msa1233560:CDS
GTAAGTGCAGATGTTAATGT+AGG 0.552422 8_2:+10348533 None:intergenic
AGCTCTATATTTGATACCTA+CGG 0.553269 8_2:-10350021 Msa1233560:CDS
AACAATCAAACAAACATACA+TGG 0.553708 8_2:+10346079 None:intergenic
CTAATCCATCAGCAGCAAAA+GGG 0.554258 8_2:+10346861 None:intergenic
GGCAGGAAACCAGCTAAGAA+AGG 0.554760 8_2:-10348946 Msa1233560:intron
CAACTACATAAGCTTTAGCA+AGG 0.555120 8_2:+10347568 None:intergenic
CTATAGTAGACTAATGGAGC+TGG 0.556484 8_2:+10349144 None:intergenic
CACAGAAGCCAAAAGGTGAA+GGG 0.557115 8_2:-10350141 Msa1233560:CDS
AGCTTCAACAAAACATGGGT+GGG 0.558582 8_2:-10347962 Msa1233560:CDS
ATTTACTTTCCTGCAAGTGA+AGG 0.560892 8_2:-10347612 Msa1233560:CDS
TATACCAATGGCTGATGAGT+TGG 0.561542 8_2:+10347526 None:intergenic
AAGCTAGATAGGCAACTCTA+CGG 0.562069 8_2:-10348014 Msa1233560:CDS
AAGGAACTCCTCAGAACTGA+TGG 0.562150 8_2:-10348395 Msa1233560:CDS
ACCGCTGGTTTAAATATCAC+AGG 0.565086 8_2:-10350072 Msa1233560:CDS
CACCTTGCCTTACCCTCGAA+GGG 0.565890 8_2:-10348977 Msa1233560:CDS
TCAGAAGGCGAAGGCCGTGT+GGG 0.568063 8_2:+10346894 None:intergenic
ATTGAGAAGACGTTCTTGAT+GGG 0.569095 8_2:-10347262 Msa1233560:CDS
TGTGCACCAAACGGGCCCTA+AGG 0.569822 8_2:-10350605 Msa1233560:five_prime_UTR
AGCTATCAGCCTGAGGATGT+GGG 0.574193 8_2:+10347652 None:intergenic
ATCACCAACTCATCAGCCAT+TGG 0.576161 8_2:-10347530 Msa1233560:intron
TGAAGACTTTACGAGGAGAT+GGG 0.579763 8_2:-10349110 Msa1233560:CDS
GAAAAGTGAATCAATCTGGA+TGG 0.587432 8_2:-10348249 Msa1233560:intron
ATTGATGCATAGGAATGTGT+TGG 0.588062 8_2:-10350109 Msa1233560:CDS
ACACCTTGCCTTACCCTCGA+AGG 0.589170 8_2:-10348978 Msa1233560:CDS
GTTACATTGATGGTTGACCT+AGG 0.590921 8_2:-10350349 Msa1233560:five_prime_UTR
CTATGAATAACATACGAAGA+AGG 0.592875 8_2:-10346143 Msa1233560:three_prime_UTR
TCTAAGGAATCGATATGGAC+CGG 0.593095 8_2:-10346270 Msa1233560:CDS
TCGAGGGTAAGGCAAGGTGT+TGG 0.593510 8_2:+10348981 None:intergenic
ACCATCAATGTAACTAATGA+GGG 0.594128 8_2:+10350358 None:intergenic
TTAGGTGGTGGAAACTTAAG+GGG 0.594767 8_2:+10348365 None:intergenic
TTTGTTGTTATCTAGAGGTG+TGG 0.596437 8_2:-10346936 Msa1233560:intron
CTTGAAGATATTCCTAACCA+TGG 0.597036 8_2:-10349355 Msa1233560:CDS
ATAGCGACTTGCAAGCCACT+GGG 0.598464 8_2:-10350238 Msa1233560:five_prime_UTR
ATCAGAAGGCGAAGGCCGTG+TGG 0.599096 8_2:+10346893 None:intergenic
GAGGAAGGATTGACTTGCAG+AGG 0.599561 8_2:-10346212 Msa1233560:CDS
ATGGGCTGTGCTTAAGTCAT+GGG 0.599702 8_2:-10346834 Msa1233560:CDS
TAGAAAGCTCATCATACTCG+GGG 0.602660 8_2:+10346525 None:intergenic
CACCTTCAATTCTCTGTCCG+AGG 0.602919 8_2:+10346396 None:intergenic
ATCCAAGACGTCAACAGCCT+AGG 0.605417 8_2:+10350332 None:intergenic
AGCTCCTAGAATCGGTGCGG+AGG 0.607434 8_2:+10349489 None:intergenic
GATATGGATATATTGAGTCA+TGG 0.608683 8_2:+10347778 None:intergenic
TTTCAATGGGATAGTGACAT+GGG 0.609030 8_2:-10349442 Msa1233560:CDS
ATTCCCTCAACCCCTATCCA+TGG 0.611269 8_2:-10346114 Msa1233560:three_prime_UTR
ACTTTACGAGGAGATGGGAC+AGG 0.611272 8_2:-10349105 Msa1233560:CDS
CATGGATAATAACATGACCA+TGG 0.612525 8_2:+10346097 None:intergenic
AAGGGTAGTCCTCTATCAGA+AGG 0.614571 8_2:+10346879 None:intergenic
AACAAATAGGCATCTTAGTG+TGG 0.616014 8_2:-10347380 Msa1233560:CDS
TTCATTGTGTCACGATAGTG+CGG 0.616157 8_2:+10347331 None:intergenic
ATTAGTGCTACTAGTGCTGA+TGG 0.617007 8_2:-10349964 Msa1233560:intron
AATAACATGACCATGGATAG+GGG 0.620015 8_2:+10346104 None:intergenic
ACAGAAGCCAAAAGGTGAAG+GGG 0.621182 8_2:-10350140 Msa1233560:CDS
CAGCTTCAACAAAACATGGG+TGG 0.621253 8_2:-10347963 Msa1233560:CDS
TGCTGAAGCAATCCATATGA+GGG 0.621259 8_2:+10346643 None:intergenic
ACTCAATATATCCATATCTG+AGG 0.622340 8_2:-10347773 Msa1233560:CDS
ACCTGTGATATTTAAACCAG+CGG 0.625148 8_2:+10350071 None:intergenic
CAGAAGGCGAAGGCCGTGTG+GGG 0.628083 8_2:+10346895 None:intergenic
GAGTGTCTTGGTAAATGCAG+AGG 0.628961 8_2:-10347290 Msa1233560:CDS
GTGCTTCACCATCAGTTCTG+AGG 0.630572 8_2:+10348387 None:intergenic
TTATTCATAGAATTACTACA+AGG 0.633858 8_2:+10346156 None:intergenic
TGATATTTAAACCAGCGGTG+AGG 0.636637 8_2:+10350076 None:intergenic
ACGGCCCAAGATTGAACCGT+AGG 0.637844 8_2:+10350005 None:intergenic
TGAACATTAATGCACTTGCA+AGG 0.638089 8_2:-10347312 Msa1233560:CDS
TTTATTGGTGCACCAAACAG+CGG 0.638401 8_2:-10350674 Msa1233560:five_prime_UTR
CAGATCCTAAAAGTGAGAGA+CGG 0.638615 8_2:-10348655 Msa1233560:CDS
AGTGTCTTGGTAAATGCAGA+GGG 0.642136 8_2:-10347289 Msa1233560:CDS
GTAAACGTGAAGAATGGGAA+AGG 0.646192 8_2:-10349083 Msa1233560:CDS
TTTGCTTTATCCTTCAAGTG+AGG 0.646310 8_2:-10346231 Msa1233560:CDS
CTATGATGTCTACAATGATG+TGG 0.649661 8_2:-10349052 Msa1233560:CDS
GCTGGTTTAAATATCACAGG+TGG 0.653722 8_2:-10350069 Msa1233560:CDS
TTAAGAATGTAACCTCCGTA+CGG 0.656295 8_2:+10346590 None:intergenic
ACCTTGCCTTACCCTCGAAG+GGG 0.659200 8_2:-10348976 Msa1233560:CDS
GCTTCTGATGAACAATACCT+CGG 0.660873 8_2:-10346413 Msa1233560:CDS
TCAACCTGAGAGCCACTGAA+CGG 0.665209 8_2:+10349986 None:intergenic
TTTGGACAATATCCGTACGG+AGG 0.665441 8_2:-10346602 Msa1233560:CDS
GAACTTGTAGAGGTTGGTCA+CGG 0.669529 8_2:-10346734 Msa1233560:CDS
AGTAAGTGTTGCAAGTCATG+GGG 0.670529 8_2:+10350305 None:intergenic
AATGGCTGATGAGTTGGTGA+TGG 0.671659 8_2:+10347532 None:intergenic
AGTCCTCTATCAGAAGGCGA+AGG 0.676314 8_2:+10346885 None:intergenic
TATGATGTCTACAATGATGT+GGG 0.681464 8_2:-10349051 Msa1233560:CDS
CCTTGCCTTACCCTCGAAGG+GGG 0.681885 8_2:-10348975 Msa1233560:CDS
TCCAGCTCCTAGAATCGGTG+CGG 0.683704 8_2:+10349486 None:intergenic
GAACAGCTTCAACAAAACAT+GGG 0.695205 8_2:-10347966 Msa1233560:CDS
GGACCAAAGCTATCAGCCTG+AGG 0.704451 8_2:+10347645 None:intergenic
TATTCATAGAATTACTACAA+GGG 0.705695 8_2:+10346157 None:intergenic
AAGGATCCTACTTCCCCACA+CGG 0.713770 8_2:-10346908 Msa1233560:CDS
GAAGAACTGAAGACTTTACG+AGG 0.717242 8_2:-10349117 Msa1233560:CDS
AGAAAGCTCATCATACTCGG+GGG 0.733263 8_2:+10346526 None:intergenic
TGAAGCAATCCATATGAGGG+TGG 0.741108 8_2:+10346646 None:intergenic
GCAAATGAAAGAAAACCCAG+TGG 0.781840 8_2:+10350223 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTATATATTTTTTAAT+AGG - chr8_2:10348852-10348871 Msa1233560:intron 0.0%
!!! ATTAAGTTATCCTTTTTTAT+TGG - chr8_2:10345998-10346017 Msa1233560:three_prime_UTR 15.0%
!!! AGTTAGTATATTATGTTTTA+AGG - chr8_2:10347796-10347815 Msa1233560:CDS 15.0%
!!! CAATATTCTTATTTTAGTTT+TGG + chr8_2:10348570-10348589 None:intergenic 15.0%
!! AGTTTAACAATTAAAAAACT+AGG + chr8_2:10348607-10348626 None:intergenic 15.0%
!! TAATATAATGTATAACTCAA+TGG + chr8_2:10349229-10349248 None:intergenic 15.0%
!!! TAACAAACTTTTTAAGTTTA+AGG + chr8_2:10350729-10350748 None:intergenic 15.0%
!!! TTTGCCTAAAAAGTATATAT+CGG - chr8_2:10345945-10345964 Msa1233560:three_prime_UTR 20.0%
!!! GTAAATTTTTATGTACCTTA+GGG + chr8_2:10346100-10346119 None:intergenic 20.0%
!! ATTATACAACTAGTAGAATT+GGG + chr8_2:10346122-10346141 None:intergenic 20.0%
!! AATTATACAACTAGTAGAAT+TGG + chr8_2:10346123-10346142 None:intergenic 20.0%
!!! TAGAATTGTTTTTCATTTGT+AGG + chr8_2:10346279-10346298 None:intergenic 20.0%
!!! TCATATTTTAAACTCACAAT+TGG - chr8_2:10346882-10346901 Msa1233560:CDS 20.0%
!!! ATACAAAGTTCATTTTCAAT+GGG - chr8_2:10347232-10347251 Msa1233560:CDS 20.0%
!!! ATTTTTCATAATTACCTTGT+TGG + chr8_2:10347429-10347448 None:intergenic 20.0%
!!! TACTTAATAGTGTCAAATTT+TGG + chr8_2:10347489-10347508 None:intergenic 20.0%
!!! TTATGATGGCATTATTTTTT+TGG - chr8_2:10347911-10347930 Msa1233560:intron 20.0%
!!! ATTTTTAGTCATGCAAAATT+TGG - chr8_2:10348373-10348392 Msa1233560:CDS 20.0%
!! TAAAAAACTAGGATGAAAAA+TGG + chr8_2:10348596-10348615 None:intergenic 20.0%
!! TGCTTTGATATATTTAATGT+AGG - chr8_2:10348633-10348652 Msa1233560:CDS 20.0%
!! TATATTCAGTAGTTAAAAAG+AGG - chr8_2:10349562-10349581 Msa1233560:intron 20.0%
!!! TTTTAATGTCTAAACATCAA+TGG - chr8_2:10349631-10349650 Msa1233560:intron 20.0%
!!! TAACGAAAAGTTTAAAATTG+CGG + chr8_2:10349682-10349701 None:intergenic 20.0%
!! TATTCATAGAATTACTACAA+GGG + chr8_2:10350533-10350552 None:intergenic 20.0%
!! TTATTCATAGAATTACTACA+AGG + chr8_2:10350534-10350553 None:intergenic 20.0%
!! CTAAAAAGTATATATCGGAA+GGG - chr8_2:10345950-10345969 Msa1233560:three_prime_UTR 25.0%
!! GGTAAATTTTTATGTACCTT+AGG + chr8_2:10346101-10346120 None:intergenic 25.0%
! GGACTATATATCTTATGTTT+CGG + chr8_2:10346191-10346210 None:intergenic 25.0%
! ATATTTGTAGAAAGTGGAAA+AGG - chr8_2:10347137-10347156 Msa1233560:intron 25.0%
!! CATACAAAGTTCATTTTCAA+TGG - chr8_2:10347231-10347250 Msa1233560:CDS 25.0%
! TATATTGAGAATTTCATGCT+AGG - chr8_2:10347284-10347303 Msa1233560:CDS 25.0%
!! GACTAAAAATGTGTTTCTAA+TGG + chr8_2:10348363-10348382 None:intergenic 25.0%
!!! TTTTGAAAAGTGAATCAATC+TGG - chr8_2:10348434-10348453 Msa1233560:CDS 25.0%
!!! TGAATTCTTTTGATAATGTG+AGG + chr8_2:10348509-10348528 None:intergenic 25.0%
! TCACATTATCAAAAGAATTC+AGG - chr8_2:10348508-10348527 Msa1233560:CDS 25.0%
! ATCAAGTATGTACAATTTGT+TGG + chr8_2:10348887-10348906 None:intergenic 25.0%
!! ATCATTTTGTAAGAAAAGGA+AGG + chr8_2:10348980-10348999 None:intergenic 25.0%
!! TTCCTTTTCTTACAAAATGA+TGG - chr8_2:10348979-10348998 Msa1233560:CDS 25.0%
!! TTCCATCATTTTGTAAGAAA+AGG + chr8_2:10348984-10349003 None:intergenic 25.0%
! TTAATATCTATATGTGTGAC+AGG - chr8_2:10349246-10349265 Msa1233560:intron 25.0%
! ATTGTCTGCTGTATTATATA+AGG - chr8_2:10349463-10349482 Msa1233560:CDS 25.0%
! TGCTGTATTATATAAGGATT+GGG - chr8_2:10349469-10349488 Msa1233560:CDS 25.0%
! TAACTACTGAATATATGTCT+AGG + chr8_2:10349557-10349576 None:intergenic 25.0%
!!! ATTAATCTTCTGCTTTTAGT+TGG + chr8_2:10350127-10350146 None:intergenic 25.0%
! TATAATGGTCAAGTCAATTA+GGG + chr8_2:10350236-10350255 None:intergenic 25.0%
!! TTTTAGATGGAGATACTATT+AGG + chr8_2:10350505-10350524 None:intergenic 25.0%
! AATAGTATCTCCATCTAAAA+AGG - chr8_2:10350505-10350524 Msa1233560:five_prime_UTR 25.0%
! AACAATCAAACAAACATACA+TGG + chr8_2:10350611-10350630 None:intergenic 25.0%
!! GTTTGATTGTTATAGTGTTT+TGG - chr8_2:10350620-10350639 Msa1233560:five_prime_UTR 25.0%
!! CCTTCCGATATATACTTTTT+AGG + chr8_2:10345952-10345971 None:intergenic 30.0%
! CCTAAAAAGTATATATCGGA+AGG - chr8_2:10345949-10345968 Msa1233560:three_prime_UTR 30.0%
TATCTTATGTTTCGGTTCAA+CGG + chr8_2:10346183-10346202 None:intergenic 30.0%
ATAGTCCAAACTCTTACTTT+AGG - chr8_2:10346204-10346223 Msa1233560:CDS 30.0%
TAGTCCAAACTCTTACTTTA+GGG - chr8_2:10346205-10346224 Msa1233560:CDS 30.0%
! TTTTCATTTGTAGGCCTAAA+GGG + chr8_2:10346270-10346289 None:intergenic 30.0%
! TTTTTCATTTGTAGGCCTAA+AGG + chr8_2:10346271-10346290 None:intergenic 30.0%
ACCATCAATGTAACTAATGA+GGG + chr8_2:10346332-10346351 None:intergenic 30.0%
AACCATCAATGTAACTAATG+AGG + chr8_2:10346333-10346352 None:intergenic 30.0%
! TTTTCTTTCATTTGCCAGAA+CGG - chr8_2:10346472-10346491 Msa1233560:CDS 30.0%
AGCTCTATATTTGATACCTA+CGG - chr8_2:10346666-10346685 Msa1233560:CDS 30.0%
GTTATGAGTATAAATCCATG+TGG + chr8_2:10346784-10346803 None:intergenic 30.0%
GAACGTCAAATATAAACATG+TGG - chr8_2:10346919-10346938 Msa1233560:CDS 30.0%
TGTGACATATTTGTAGAAAG+TGG - chr8_2:10347131-10347150 Msa1233560:intron 30.0%
TTCTCAATATAAAATGCTCC+TGG + chr8_2:10347275-10347294 None:intergenic 30.0%
TCTTGTCTATAGTAGACTAA+TGG + chr8_2:10347552-10347571 None:intergenic 30.0%
TATGATGTCTACAATGATGT+GGG - chr8_2:10347636-10347655 Msa1233560:CDS 30.0%
AGTTTATAACCTTTCTTAGC+TGG + chr8_2:10347753-10347772 None:intergenic 30.0%
! TTTAAGGTATTTCTGCACAA+AGG - chr8_2:10347812-10347831 Msa1233560:CDS 30.0%
! AATGTTTTCATCCCTAGTAT+AGG - chr8_2:10347883-10347902 Msa1233560:intron 30.0%
! ATGTTTTCATCCCTAGTATA+GGG - chr8_2:10347884-10347903 Msa1233560:intron 30.0%
TCATAACATACCCTATACTA+GGG + chr8_2:10347897-10347916 None:intergenic 30.0%
ATCATAACATACCCTATACT+AGG + chr8_2:10347898-10347917 None:intergenic 30.0%
TAGTATAGGGTATGTTATGA+TGG - chr8_2:10347897-10347916 Msa1233560:intron 30.0%
!! TCATTAAAGGTGTTAAACTC+TGG + chr8_2:10348196-10348215 None:intergenic 30.0%
! ATACCTTGAATGATTTTAGG+TGG + chr8_2:10348340-10348359 None:intergenic 30.0%
! TGGATACCTTGAATGATTTT+AGG + chr8_2:10348343-10348362 None:intergenic 30.0%
GATATGGATATATTGAGTCA+TGG + chr8_2:10348912-10348931 None:intergenic 30.0%
ACTCAATATATCCATATCTG+AGG - chr8_2:10348914-10348933 Msa1233560:intron 30.0%
!! GCATTTATTTTCCTCAGATA+TGG + chr8_2:10348928-10348947 None:intergenic 30.0%
AATAAATGCAGCTGATACAA+AGG - chr8_2:10348939-10348958 Msa1233560:intron 30.0%
GGAAAGTAAATATCACTAAC+AGG + chr8_2:10349066-10349085 None:intergenic 30.0%
GTCAGTTGAATTTATACCAA+TGG + chr8_2:10349176-10349195 None:intergenic 30.0%
! CTATTTGTTGCTATGATGAA+TGG + chr8_2:10349296-10349315 None:intergenic 30.0%
CATTCATCATAGCAACAAAT+AGG - chr8_2:10349294-10349313 Msa1233560:CDS 30.0%
GGAAGTAAAAGCTTATGAAT+AGG + chr8_2:10349338-10349357 None:intergenic 30.0%
CTGCTGTATTATATAAGGAT+TGG - chr8_2:10349468-10349487 Msa1233560:CDS 30.0%
!! TACCTTTTGAGTAGATCATT+AGG + chr8_2:10349515-10349534 None:intergenic 30.0%
! CTAGGATCTAATGTTTTGTA+AGG + chr8_2:10349539-10349558 None:intergenic 30.0%
!! ATTTTGGAAAGAACTTGTAG+AGG - chr8_2:10349943-10349962 Msa1233560:intron 30.0%
! AATTTTGGACAATATCCGTA+CGG - chr8_2:10350082-10350101 Msa1233560:CDS 30.0%
AGAAGATTAATGCCTAAGAA+AGG - chr8_2:10350136-10350155 Msa1233560:CDS 30.0%
! GCTTTCTAAGAACTATCAAA+AGG - chr8_2:10350177-10350196 Msa1233560:five_prime_UTR 30.0%
!!! TCAATTAGGGTGTCATTTTT+TGG + chr8_2:10350223-10350242 None:intergenic 30.0%
CTATAATGGTCAAGTCAATT+AGG + chr8_2:10350237-10350256 None:intergenic 30.0%
!! AATTGACTTGACCATTATAG+AGG - chr8_2:10350237-10350256 Msa1233560:five_prime_UTR 30.0%
TTGAACAAAAACTCACTCAA+AGG - chr8_2:10350380-10350399 Msa1233560:intron 30.0%
GAAGGATAAAGCAAAGTATA+CGG + chr8_2:10350451-10350470 None:intergenic 30.0%
CTATGAATAACATACGAAGA+AGG - chr8_2:10350544-10350563 Msa1233560:five_prime_UTR 30.0%
TAATAACATGACCATGGATA+GGG + chr8_2:10350587-10350606 None:intergenic 30.0%
ATAATAACATGACCATGGAT+AGG + chr8_2:10350588-10350607 None:intergenic 30.0%
TTGAAATCAATGGTCTAGAA+TGG + chr8_2:10350687-10350706 None:intergenic 30.0%
! AAAGCTGCATTTGAAATCAA+TGG + chr8_2:10350697-10350716 None:intergenic 30.0%
TATATATCGGAAGGGTGAAT+AGG - chr8_2:10345958-10345977 Msa1233560:three_prime_UTR 35.0%
!! GTTTGGTGCACCAATAAAAA+AGG + chr8_2:10346011-10346030 None:intergenic 35.0%
CATGATAGGAAGACATGATA+TGG + chr8_2:10346064-10346083 None:intergenic 35.0%
ACGGAAGAGCTTATTGTTTA+AGG + chr8_2:10346164-10346183 None:intergenic 35.0%
TTTCATTTGTAGGCCTAAAG+GGG + chr8_2:10346269-10346288 None:intergenic 35.0%
ATCAATGTAACTAATGAGGG+TGG + chr8_2:10346329-10346348 None:intergenic 35.0%
ACCCTCATTAGTTACATTGA+TGG - chr8_2:10346328-10346347 Msa1233560:CDS 35.0%
! TAGTAAGTGTTGCAAGTCAT+GGG + chr8_2:10346386-10346405 None:intergenic 35.0%
! ATAGTAAGTGTTGCAAGTCA+TGG + chr8_2:10346387-10346406 None:intergenic 35.0%
AAAGTGCACAACAAATTTGC+TGG - chr8_2:10346498-10346517 Msa1233560:CDS 35.0%
TTCATTTCACAGAAGCCAAA+AGG - chr8_2:10346539-10346558 Msa1233560:CDS 35.0%
ATTGATGCATAGGAATGTGT+TGG - chr8_2:10346578-10346597 Msa1233560:CDS 35.0%
ACCTGTGATATTTAAACCAG+CGG + chr8_2:10346619-10346638 None:intergenic 35.0%
! AAATATCACAGGTGGATTCA+AGG - chr8_2:10346626-10346645 Msa1233560:CDS 35.0%
TAAACATAATGCTCACCACA+TGG - chr8_2:10346766-10346785 Msa1233560:CDS 35.0%
AGAAAGTGGAAAAGGTAAAG+TGG - chr8_2:10347145-10347164 Msa1233560:intron 35.0%
GAAAGTGGAAAAGGTAAAGT+GGG - chr8_2:10347146-10347165 Msa1233560:intron 35.0%
! TTTTCAATGGGATAGTGACA+TGG - chr8_2:10347244-10347263 Msa1233560:CDS 35.0%
TTTCAATGGGATAGTGACAT+GGG - chr8_2:10347245-10347264 Msa1233560:CDS 35.0%
CTTGAAGATATTCCTAACCA+TGG - chr8_2:10347332-10347351 Msa1233560:CDS 35.0%
!! AAACAAAGTTGATGGTTCCA+TGG + chr8_2:10347352-10347371 None:intergenic 35.0%
TGAGTTGCAAACAAAGTTGA+TGG + chr8_2:10347360-10347379 None:intergenic 35.0%
! TCAACTTTGTTTGCAACTCA+TGG - chr8_2:10347360-10347379 Msa1233560:CDS 35.0%
CTATGATGTCTACAATGATG+TGG - chr8_2:10347635-10347654 Msa1233560:CDS 35.0%
CTTCCAAGAGATGAATCATT+TGG - chr8_2:10348070-10348089 Msa1233560:intron 35.0%
TGACCAAATGATTCATCTCT+TGG + chr8_2:10348076-10348095 None:intergenic 35.0%
GTAAGTGCAGATGTTAATGT+AGG + chr8_2:10348157-10348176 None:intergenic 35.0%
AAATGCACGCACATCATTAA+AGG + chr8_2:10348209-10348228 None:intergenic 35.0%
GTTCCTTGAACAATGGTATA+GGG + chr8_2:10348279-10348298 None:intergenic 35.0%
AGTTCCTTGAACAATGGTAT+AGG + chr8_2:10348280-10348299 None:intergenic 35.0%
!! TTTAGGTGGTGGAAACTTAA+GGG + chr8_2:10348326-10348345 None:intergenic 35.0%
!!! TTTTAGGTGGTGGAAACTTA+AGG + chr8_2:10348327-10348346 None:intergenic 35.0%
GAAAAGTGAATCAATCTGGA+TGG - chr8_2:10348438-10348457 Msa1233560:CDS 35.0%
TTTACAAGAGAGATGATTGC+TGG - chr8_2:10348476-10348495 Msa1233560:CDS 35.0%
!!! CTGTTCTTTTGTTATTGTGC+TGG + chr8_2:10348707-10348726 None:intergenic 35.0%
AGAACAGCTTCAACAAAACA+TGG - chr8_2:10348720-10348739 Msa1233560:intron 35.0%
GAACAGCTTCAACAAAACAT+GGG - chr8_2:10348721-10348740 Msa1233560:intron 35.0%
ATTTACTTTCCTGCAAGTGA+AGG - chr8_2:10349075-10349094 Msa1233560:CDS 35.0%
!! AAGGTGTTGAAGCTTCAATT+TGG - chr8_2:10349094-10349113 Msa1233560:CDS 35.0%
! CAACTACATAAGCTTTAGCA+AGG + chr8_2:10349122-10349141 None:intergenic 35.0%
AACAAATAGGCATCTTAGTG+TGG - chr8_2:10349307-10349326 Msa1233560:CDS 35.0%
TGAACATTAATGCACTTGCA+AGG - chr8_2:10349375-10349394 Msa1233560:CDS 35.0%
TATTGAGAAGACGTTCTTGA+TGG - chr8_2:10349424-10349443 Msa1233560:CDS 35.0%
ATTGAGAAGACGTTCTTGAT+GGG - chr8_2:10349425-10349444 Msa1233560:CDS 35.0%
TGCCTAATGATCTACTCAAA+AGG - chr8_2:10349510-10349529 Msa1233560:CDS 35.0%
GAATATCCCATCTTAGATTG+AGG + chr8_2:10349607-10349626 None:intergenic 35.0%
! CAATCTAAGATGGGATATTC+AGG - chr8_2:10349607-10349626 Msa1233560:intron 35.0%
TGTCTAAACATCAATGGTTG+TGG - chr8_2:10349637-10349656 Msa1233560:intron 35.0%
!! CTTCCTTTGTTGTTATCTAG+AGG - chr8_2:10349746-10349765 Msa1233560:intron 35.0%
ACACCTCTAGATAACAACAA+AGG + chr8_2:10349752-10349771 None:intergenic 35.0%
!! TTTGTTGTTATCTAGAGGTG+TGG - chr8_2:10349751-10349770 Msa1233560:intron 35.0%
!! TGCTGATGGATTAGAGATAT+GGG - chr8_2:10349835-10349854 Msa1233560:intron 35.0%
! ATTCTGAACTCCAAGCATTT+TGG - chr8_2:10349927-10349946 Msa1233560:intron 35.0%
CAAGTTCTTTCCAAAATGCT+TGG + chr8_2:10349940-10349959 None:intergenic 35.0%
GTGACTTGAAAAATGCAACA+TGG - chr8_2:10349975-10349994 Msa1233560:CDS 35.0%
ACTTGAAAAATGCAACATGG+TGG - chr8_2:10349978-10349997 Msa1233560:CDS 35.0%
CTTGAAAAATGCAACATGGT+GGG - chr8_2:10349979-10349998 Msa1233560:CDS 35.0%
! CTTCATGCAGCTGTTAATTT+TGG - chr8_2:10350067-10350086 Msa1233560:CDS 35.0%
TTAAGAATGTAACCTCCGTA+CGG + chr8_2:10350100-10350119 None:intergenic 35.0%
!! ATCTTCTGCTTTTAGTTGGT+CGG + chr8_2:10350123-10350142 None:intergenic 35.0%
TTAGAAAGCTCATCATACTC+GGG + chr8_2:10350166-10350185 None:intergenic 35.0%
CTTAGAAAGCTCATCATACT+CGG + chr8_2:10350167-10350186 None:intergenic 35.0%
TCTTGACAAGACCTCTATAA+TGG + chr8_2:10350251-10350270 None:intergenic 35.0%
AGAGAATTGAAGGTGATCTT+TGG - chr8_2:10350299-10350318 Msa1233560:five_prime_UTR 35.0%
TTCTGATTCACAACCATTAG+AGG - chr8_2:10350324-10350343 Msa1233560:five_prime_UTR 35.0%
AATCTCTTGAAAGCCTCTAA+TGG + chr8_2:10350340-10350359 None:intergenic 35.0%
TTAGAGGCTTTCAAGAGATT+TGG - chr8_2:10350340-10350359 Msa1233560:five_prime_UTR 35.0%
! CAAGAGATTTGGAACAAAGT+TGG - chr8_2:10350351-10350370 Msa1233560:five_prime_UTR 35.0%
AAAGTATACGGCATCTTAAC+CGG + chr8_2:10350439-10350458 None:intergenic 35.0%
TTTGCTTTATCCTTCAAGTG+AGG - chr8_2:10350456-10350475 Msa1233560:five_prime_UTR 35.0%
! TACAAGGGAACCTTTTTAGA+TGG + chr8_2:10350518-10350537 None:intergenic 35.0%
AATAACATGACCATGGATAG+GGG + chr8_2:10350586-10350605 None:intergenic 35.0%
CATGGATAATAACATGACCA+TGG + chr8_2:10350593-10350612 None:intergenic 35.0%
TTTATTGGTGCACCAAACAG+CGG - chr8_2:10346013-10346032 Msa1233560:three_prime_UTR 40.0%
TTCCTATCATGTGCACCAAA+CGG - chr8_2:10346073-10346092 Msa1233560:three_prime_UTR 40.0%
TCTAAATTACCACCCCCTTT+AGG - chr8_2:10346253-10346272 Msa1233560:CDS 40.0%
TTCATTTGTAGGCCTAAAGG+GGG + chr8_2:10346268-10346287 None:intergenic 40.0%
! GTTACATTGATGGTTGACCT+AGG - chr8_2:10346338-10346357 Msa1233560:CDS 40.0%
! AGTAAGTGTTGCAAGTCATG+GGG + chr8_2:10346385-10346404 None:intergenic 40.0%
GCAAATGAAAGAAAACCCAG+TGG + chr8_2:10346467-10346486 None:intergenic 40.0%
GGACAGTGATATTGATGCAT+AGG - chr8_2:10346568-10346587 Msa1233560:CDS 40.0%
GATATTTAAACCAGCGGTGA+GGG + chr8_2:10346613-10346632 None:intergenic 40.0%
TGATATTTAAACCAGCGGTG+AGG + chr8_2:10346614-10346633 None:intergenic 40.0%
!! ACCGCTGGTTTAAATATCAC+AGG - chr8_2:10346615-10346634 Msa1233560:CDS 40.0%
! GCTGGTTTAAATATCACAGG+TGG - chr8_2:10346618-10346637 Msa1233560:CDS 40.0%
TGATACCTACGGTTCAATCT+TGG - chr8_2:10346677-10346696 Msa1233560:CDS 40.0%
GATACCTACGGTTCAATCTT+GGG - chr8_2:10346678-10346697 Msa1233560:CDS 40.0%
! ATTAGTGCTACTAGTGCTGA+TGG - chr8_2:10346723-10346742 Msa1233560:CDS 40.0%
GGAAAGAGATCGTTTCTTGA+AGG - chr8_2:10347167-10347186 Msa1233560:intron 40.0%
!! AAGTTGATGGTTCCATGGTT+AGG + chr8_2:10347347-10347366 None:intergenic 40.0%
! ACGCATTTTCTTTGCCAACA+AGG - chr8_2:10347412-10347431 Msa1233560:CDS 40.0%
CTATAGTAGACTAATGGAGC+TGG + chr8_2:10347546-10347565 None:intergenic 40.0%
GAAGAACTGAAGACTTTACG+AGG - chr8_2:10347570-10347589 Msa1233560:CDS 40.0%
TGAAGACTTTACGAGGAGAT+GGG - chr8_2:10347577-10347596 Msa1233560:CDS 40.0%
GACAGGTAAACGTGAAGAAT+GGG - chr8_2:10347599-10347618 Msa1233560:CDS 40.0%
GTAAACGTGAAGAATGGGAA+AGG - chr8_2:10347604-10347623 Msa1233560:CDS 40.0%
!!! GCTAAGCTAGCTTTTCTATC+AGG + chr8_2:10347666-10347685 None:intergenic 40.0%
CTGCACAAAGGAAAGTGATA+TGG - chr8_2:10347824-10347843 Msa1233560:intron 40.0%
CAGATCCTAAAAGTGAGAGA+CGG - chr8_2:10348032-10348051 Msa1233560:CDS 40.0%
TAGCCCTATACCATTGTTCA+AGG - chr8_2:10348273-10348292 Msa1233560:intron 40.0%
!! TTAGGTGGTGGAAACTTAAG+GGG + chr8_2:10348325-10348344 None:intergenic 40.0%
!! CCTTGAATGATTTTAGGTGG+TGG + chr8_2:10348337-10348356 None:intergenic 40.0%
CCACCACCTAAAATCATTCA+AGG - chr8_2:10348334-10348353 Msa1233560:intron 40.0%
AAGCTAGATAGGCAACTCTA+CGG - chr8_2:10348673-10348692 Msa1233560:intron 40.0%
AGCTTCAACAAAACATGGGT+GGG - chr8_2:10348725-10348744 Msa1233560:intron 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG - chr8_2:10348996-10349015 Msa1233560:CDS 40.0%
TATACCAATGGCTGATGAGT+TGG + chr8_2:10349164-10349183 None:intergenic 40.0%
TTCATTGTGTCACGATAGTG+CGG + chr8_2:10349359-10349378 None:intergenic 40.0%
AGTGTCTTGGTAAATGCAGA+GGG - chr8_2:10349398-10349417 Msa1233560:CDS 40.0%
TTCGCAACCTCAATCTAAGA+TGG - chr8_2:10349597-10349616 Msa1233560:intron 40.0%
! TCGCAACCTCAATCTAAGAT+GGG - chr8_2:10349598-10349617 Msa1233560:intron 40.0%
CTAATCCATCAGCAGCAAAA+GGG + chr8_2:10349829-10349848 None:intergenic 40.0%
TCTAATCCATCAGCAGCAAA+AGG + chr8_2:10349830-10349849 None:intergenic 40.0%
!! CTGCTGATGGATTAGAGATA+TGG - chr8_2:10349834-10349853 Msa1233560:intron 40.0%
TGGAAAGAACTTGTAGAGGT+TGG - chr8_2:10349947-10349966 Msa1233560:intron 40.0%
TGCTGAAGCAATCCATATGA+GGG + chr8_2:10350047-10350066 None:intergenic 40.0%
TAGAAAGCTCATCATACTCG+GGG + chr8_2:10350165-10350184 None:intergenic 40.0%
GCTTCTGATGAACAATACCT+CGG - chr8_2:10350274-10350293 Msa1233560:five_prime_UTR 40.0%
GGAACAATGATGAGACTCTA+AGG - chr8_2:10350401-10350420 Msa1233560:intron 40.0%
! GAGACTCTAAGGAATCGATA+TGG - chr8_2:10350412-10350431 Msa1233560:intron 40.0%
TCTAAGGAATCGATATGGAC+CGG - chr8_2:10350417-10350436 Msa1233560:intron 40.0%
CTTTATCCTTCAAGTGAGGA+AGG - chr8_2:10350460-10350479 Msa1233560:five_prime_UTR 40.0%
ATCGGAAGGGTGAATAGGAT+AGG - chr8_2:10345963-10345982 Msa1233560:three_prime_UTR 45.0%
!! ACCAAACAGCGGATTGAATC+AGG - chr8_2:10346024-10346043 Msa1233560:three_prime_UTR 45.0%
TCCTGATTCAATCCGCTGTT+TGG + chr8_2:10346028-10346047 None:intergenic 45.0%
TCCTATCATGTGCACCAAAC+GGG - chr8_2:10346074-10346093 Msa1233560:three_prime_UTR 45.0%
GGAGCCCTAAAGTAAGAGTT+TGG + chr8_2:10346212-10346231 None:intergenic 45.0%
TCACAGAAGCCAAAAGGTGA+AGG - chr8_2:10346545-10346564 Msa1233560:CDS 45.0%
CACAGAAGCCAAAAGGTGAA+GGG - chr8_2:10346546-10346565 Msa1233560:CDS 45.0%
ACAGAAGCCAAAAGGTGAAG+GGG - chr8_2:10346547-10346566 Msa1233560:CDS 45.0%
! ACAGGTGGATTCAAGGTTCT+TGG - chr8_2:10346633-10346652 Msa1233560:CDS 45.0%
GATAGTGACATGGGAATTCC+AGG - chr8_2:10347254-10347273 Msa1233560:CDS 45.0%
AATGGAGCTGGTGTTTCACT+TGG + chr8_2:10347534-10347553 None:intergenic 45.0%
CTGAAGACTTTACGAGGAGA+TGG - chr8_2:10347576-10347595 Msa1233560:CDS 45.0%
GGACAGGTAAACGTGAAGAA+TGG - chr8_2:10347598-10347617 Msa1233560:CDS 45.0%
GTGTTGGATCCTCCAATAAC+GGG + chr8_2:10347693-10347712 None:intergenic 45.0%
! GGTGTTGGATCCTCCAATAA+CGG + chr8_2:10347694-10347713 None:intergenic 45.0%
! TTTCTTAGCTGGTTTCCTGC+CGG + chr8_2:10347742-10347761 None:intergenic 45.0%
! TGATGTGCGTGCATTTTACG+AGG - chr8_2:10348213-10348232 Msa1233560:CDS 45.0%
! GATGTGCGTGCATTTTACGA+GGG - chr8_2:10348214-10348233 Msa1233560:CDS 45.0%
CTGAGGAGTTCCTTGAACAA+TGG + chr8_2:10348286-10348305 None:intergenic 45.0%
AAGGAACTCCTCAGAACTGA+TGG - chr8_2:10348292-10348311 Msa1233560:intron 45.0%
!! CTATCTAGCTTGCTCTTTGG+TGG + chr8_2:10348664-10348683 None:intergenic 45.0%
CACCAAAGAGCAAGCTAGAT+AGG - chr8_2:10348662-10348681 Msa1233560:intron 45.0%
!! TGCCTATCTAGCTTGCTCTT+TGG + chr8_2:10348667-10348686 None:intergenic 45.0%
CAGCTTCAACAAAACATGGG+TGG - chr8_2:10348724-10348743 Msa1233560:intron 45.0%
!! AATGGCTGATGAGTTGGTGA+TGG + chr8_2:10349158-10349177 None:intergenic 45.0%
ATCACCAACTCATCAGCCAT+TGG - chr8_2:10349157-10349176 Msa1233560:CDS 45.0%
GAGTGTCTTGGTAAATGCAG+AGG - chr8_2:10349397-10349416 Msa1233560:CDS 45.0%
! GATTGGGTTTTCACTGAGCA+AGG - chr8_2:10349485-10349504 Msa1233560:CDS 45.0%
! ATCTAGAGGTGTGGCTGTTA+AGG - chr8_2:10349760-10349779 Msa1233560:intron 45.0%
AAGGGTAGTCCTCTATCAGA+AGG + chr8_2:10349811-10349830 None:intergenic 45.0%
! TATGGGCTGTGCTTAAGTCA+TGG - chr8_2:10349852-10349871 Msa1233560:intron 45.0%
! ATGGGCTGTGCTTAAGTCAT+GGG - chr8_2:10349853-10349872 Msa1233560:intron 45.0%
! GAACTTGTAGAGGTTGGTCA+CGG - chr8_2:10349953-10349972 Msa1233560:intron 45.0%
TGAAGCAATCCATATGAGGG+TGG + chr8_2:10350044-10350063 None:intergenic 45.0%
GTGCTGAAGCAATCCATATG+AGG + chr8_2:10350048-10350067 None:intergenic 45.0%
TTTGGACAATATCCGTACGG+AGG - chr8_2:10350085-10350104 Msa1233560:CDS 45.0%
AGAAAGCTCATCATACTCGG+GGG + chr8_2:10350164-10350183 None:intergenic 45.0%
TACCTCGGACAGAGAATTGA+AGG - chr8_2:10350289-10350308 Msa1233560:five_prime_UTR 45.0%
GTCAATCCTTCCTCACTTGA+AGG + chr8_2:10350469-10350488 None:intergenic 45.0%
!! TTAAAAAAATGTAAAAATAT+TGG + chr8_2:10346233-10346252 None:intergenic 5.0%
TATGTACCTTAGGGCCCGTT+TGG + chr8_2:10346091-10346110 None:intergenic 50.0%
ATTTGTAGGCCTAAAGGGGG+TGG + chr8_2:10346265-10346284 None:intergenic 50.0%
ATCCAAGACGTCAACAGCCT+AGG + chr8_2:10346358-10346377 None:intergenic 50.0%
AATAGCGACTTGCAAGCCAC+TGG - chr8_2:10346448-10346467 Msa1233560:CDS 50.0%
ATAGCGACTTGCAAGCCACT+GGG - chr8_2:10346449-10346468 Msa1233560:CDS 50.0%
TTGTGCACTTTCTGCCGTTC+TGG + chr8_2:10346489-10346508 None:intergenic 50.0%
! TCACTGTCCCCTTCACCTTT+TGG + chr8_2:10346557-10346576 None:intergenic 50.0%
TTCAATCTTGGGCCGTTCAG+TGG - chr8_2:10346689-10346708 Msa1233560:CDS 50.0%
TCAACCTGAGAGCCACTGAA+CGG + chr8_2:10346704-10346723 None:intergenic 50.0%
CACTGTCCAGCTCCTAGAAT+CGG + chr8_2:10347209-10347228 None:intergenic 50.0%
ACTTTACGAGGAGATGGGAC+AGG - chr8_2:10347582-10347601 Msa1233560:CDS 50.0%
AGCTTAGCTCGTCCCGTTAT+TGG - chr8_2:10347678-10347697 Msa1233560:CDS 50.0%
TTAGCTCGTCCCGTTATTGG+AGG - chr8_2:10347681-10347700 Msa1233560:CDS 50.0%
GGCAGGAAACCAGCTAAGAA+AGG - chr8_2:10347741-10347760 Msa1233560:CDS 50.0%
!! TCGCTCCGTCTCTCACTTTT+AGG + chr8_2:10348040-10348059 None:intergenic 50.0%
GTGCTTCACCATCAGTTCTG+AGG + chr8_2:10348303-10348322 None:intergenic 50.0%
CTGCTTAGCTCAATGGCCAA+TGG + chr8_2:10349015-10349034 None:intergenic 50.0%
! ATGTGGGCTGCTTAGCTCAA+TGG + chr8_2:10349022-10349041 None:intergenic 50.0%
AGCTATCAGCCTGAGGATGT+GGG + chr8_2:10349038-10349057 None:intergenic 50.0%
AAGCTATCAGCCTGAGGATG+TGG + chr8_2:10349039-10349058 None:intergenic 50.0%
CATCCTCAGGCTGATAGCTT+TGG - chr8_2:10349039-10349058 Msa1233560:CDS 50.0%
GCTTCAACACCTTCACTTGC+AGG + chr8_2:10349087-10349106 None:intergenic 50.0%
!! TGCACTTGCAAGGAGTGTCT+TGG - chr8_2:10349385-10349404 Msa1233560:CDS 50.0%
AAGGATCCTACTTCCCCACA+CGG - chr8_2:10349779-10349798 Msa1233560:intron 50.0%
AGTCCTCTATCAGAAGGCGA+AGG + chr8_2:10349805-10349824 None:intergenic 50.0%
! GACTACCCTTTTGCTGCTGA+TGG - chr8_2:10349821-10349840 Msa1233560:intron 50.0%
ACACTTGCACCACCCTCATA+TGG - chr8_2:10350032-10350051 Msa1233560:CDS 50.0%
TACTCGGGGGATCCTTTCTT+AGG + chr8_2:10350151-10350170 None:intergenic 50.0%
CACCTTCAATTCTCTGTCCG+AGG + chr8_2:10350294-10350313 None:intergenic 50.0%
!! GAGGAAGGATTGACTTGCAG+AGG - chr8_2:10350475-10350494 Msa1233560:five_prime_UTR 50.0%
ATTCCCTCAACCCCTATCCA+TGG - chr8_2:10350573-10350592 Msa1233560:five_prime_UTR 50.0%
TGACCATGGATAGGGGTTGA+GGG + chr8_2:10350579-10350598 None:intergenic 50.0%
ATGACCATGGATAGGGGTTG+AGG + chr8_2:10350580-10350599 None:intergenic 50.0%
!! GCCCGTTTGGTGCACATGAT+AGG + chr8_2:10346078-10346097 None:intergenic 55.0%
GACCTAGGCTGTTGACGTCT+TGG - chr8_2:10346353-10346372 Msa1233560:CDS 55.0%
ACGGCCCAAGATTGAACCGT+AGG + chr8_2:10346685-10346704 None:intergenic 55.0%
!! GTTACCTCCGCACCGATTCT+AGG - chr8_2:10347194-10347213 Msa1233560:CDS 55.0%
TCCAGCTCCTAGAATCGGTG+CGG + chr8_2:10347204-10347223 None:intergenic 55.0%
TCGAGGGTAAGGCAAGGTGT+TGG + chr8_2:10347709-10347728 None:intergenic 55.0%
ACACCTTGCCTTACCCTCGA+AGG - chr8_2:10347709-10347728 Msa1233560:CDS 55.0%
CACCTTGCCTTACCCTCGAA+GGG - chr8_2:10347710-10347729 Msa1233560:CDS 55.0%
ACCTTGCCTTACCCTCGAAG+GGG - chr8_2:10347711-10347730 Msa1233560:CDS 55.0%
! GTGCGTGCATTTTACGAGGG+TGG - chr8_2:10348217-10348236 Msa1233560:CDS 55.0%
GGACCAAAGCTATCAGCCTG+AGG + chr8_2:10349045-10349064 None:intergenic 55.0%
TGTGCACCAAACGGGCCCTA+AGG - chr8_2:10346082-10346101 Msa1233560:three_prime_UTR 60.0%
GATATCAACGCCCTCACCGC+TGG - chr8_2:10346600-10346619 Msa1233560:CDS 60.0%
AGCTCCTAGAATCGGTGCGG+AGG + chr8_2:10347201-10347220 None:intergenic 60.0%
!! TCCGCACCGATTCTAGGAGC+TGG - chr8_2:10347200-10347219 Msa1233560:CDS 60.0%
CCTTGCCTTACCCTCGAAGG+GGG - chr8_2:10347712-10347731 Msa1233560:CDS 60.0%
GTTCTCCCCCTTCGAGGGTA+AGG + chr8_2:10347720-10347739 None:intergenic 60.0%
TACCCTCGAAGGGGGAGAAC+CGG - chr8_2:10347720-10347739 Msa1233560:CDS 60.0%
GCTAAGCAGCCCACATCCTC+AGG - chr8_2:10349026-10349045 Msa1233560:CDS 60.0%
TCAGAAGGCGAAGGCCGTGT+GGG + chr8_2:10349796-10349815 None:intergenic 60.0%
ATCAGAAGGCGAAGGCCGTG+TGG + chr8_2:10349797-10349816 None:intergenic 60.0%
CGGCCTTCGCCTTCTGATAG+AGG - chr8_2:10349799-10349818 Msa1233560:intron 60.0%
TGGGCCGTTCAGTGGCTCTC+AGG - chr8_2:10346697-10346716 Msa1233560:CDS 65.0%
CCCCCTTCGAGGGTAAGGCA+AGG + chr8_2:10347715-10347734 None:intergenic 65.0%
!! TGCCGGTTCTCCCCCTTCGA+GGG + chr8_2:10347725-10347744 None:intergenic 65.0%
CGAAGGCCGTGTGGGGAAGT+AGG + chr8_2:10349788-10349807 None:intergenic 65.0%
CAGAAGGCGAAGGCCGTGTG+GGG + chr8_2:10349795-10349814 None:intergenic 65.0%
!! CTGCCGGTTCTCCCCCTTCG+AGG + chr8_2:10347726-10347745 None:intergenic 70.0%
CTCGAAGGGGGAGAACCGGC+AGG - chr8_2:10347724-10347743 Msa1233560:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 10345944 10350765 10345944 ID=Msa1233560;Name=Msa1233560
chr8_2 mRNA 10345944 10350765 10345944 ID=Msa1233560-mRNA-1;Parent=Msa1233560;Name=Msa1233560-mRNA-1;_AED=0.09;_eAED=0.09;_QI=505|1|1|1|0.8|0.72|11|243|859
chr8_2 exon 10345944 10346943 10345944 ID=Msa1233560-mRNA-1:exon:4078;Parent=Msa1233560-mRNA-1
chr8_2 exon 10347178 10347441 10347178 ID=Msa1233560-mRNA-1:exon:4077;Parent=Msa1233560-mRNA-1
chr8_2 exon 10347531 10347835 10347531 ID=Msa1233560-mRNA-1:exon:4076;Parent=Msa1233560-mRNA-1
chr8_2 exon 10347947 10348054 10347947 ID=Msa1233560-mRNA-1:exon:4075;Parent=Msa1233560-mRNA-1
chr8_2 exon 10348180 10348265 10348180 ID=Msa1233560-mRNA-1:exon:4074;Parent=Msa1233560-mRNA-1
chr8_2 exon 10348354 10348674 10348354 ID=Msa1233560-mRNA-1:exon:4073;Parent=Msa1233560-mRNA-1
chr8_2 exon 10348947 10349187 10348947 ID=Msa1233560-mRNA-1:exon:4072;Parent=Msa1233560-mRNA-1
chr8_2 exon 10349276 10349562 10349276 ID=Msa1233560-mRNA-1:exon:4071;Parent=Msa1233560-mRNA-1
chr8_2 exon 10349965 10350379 10349965 ID=Msa1233560-mRNA-1:exon:4070;Parent=Msa1233560-mRNA-1
chr8_2 exon 10350440 10350718 10350440 ID=Msa1233560-mRNA-1:exon:4069;Parent=Msa1233560-mRNA-1
chr8_2 exon 10350744 10350765 10350744 ID=Msa1233560-mRNA-1:exon:4068;Parent=Msa1233560-mRNA-1
chr8_2 five_prime_UTR 10350744 10350765 10350744 ID=Msa1233560-mRNA-1:five_prime_utr;Parent=Msa1233560-mRNA-1
chr8_2 five_prime_UTR 10350440 10350718 10350440 ID=Msa1233560-mRNA-1:five_prime_utr;Parent=Msa1233560-mRNA-1
chr8_2 five_prime_UTR 10350176 10350379 10350176 ID=Msa1233560-mRNA-1:five_prime_utr;Parent=Msa1233560-mRNA-1
chr8_2 CDS 10349965 10350175 10349965 ID=Msa1233560-mRNA-1:cds;Parent=Msa1233560-mRNA-1
chr8_2 CDS 10349276 10349562 10349276 ID=Msa1233560-mRNA-1:cds;Parent=Msa1233560-mRNA-1
chr8_2 CDS 10348947 10349187 10348947 ID=Msa1233560-mRNA-1:cds;Parent=Msa1233560-mRNA-1
chr8_2 CDS 10348354 10348674 10348354 ID=Msa1233560-mRNA-1:cds;Parent=Msa1233560-mRNA-1
chr8_2 CDS 10348180 10348265 10348180 ID=Msa1233560-mRNA-1:cds;Parent=Msa1233560-mRNA-1
chr8_2 CDS 10347947 10348054 10347947 ID=Msa1233560-mRNA-1:cds;Parent=Msa1233560-mRNA-1
chr8_2 CDS 10347531 10347835 10347531 ID=Msa1233560-mRNA-1:cds;Parent=Msa1233560-mRNA-1
chr8_2 CDS 10347178 10347441 10347178 ID=Msa1233560-mRNA-1:cds;Parent=Msa1233560-mRNA-1
chr8_2 CDS 10346187 10346943 10346187 ID=Msa1233560-mRNA-1:cds;Parent=Msa1233560-mRNA-1
chr8_2 three_prime_UTR 10345944 10346186 10345944 ID=Msa1233560-mRNA-1:three_prime_utr;Parent=Msa1233560-mRNA-1
Gene Sequence

>Msa1233560

ATGTTTTCATTTCACAGAAGCCAAAAGGTGAAGGGGACAGTGATATTGATGCATAGGAATGTGTTGGATATCAACGCCCTCACCGCTGGTTTAAATATCACAGGTGGATTCAAGGTTCTTGGTAATCTCACTAGCTCTATATTTGATACCTACGGTTCAATCTTGGGCCGTTCAGTGGCTCTCAGGTTGATTAGTGCTACTAGTGCTGATGAAAGTGGAAAAGGTAAAGTGGGAAAGAGATCGTTTCTTGAAGGTTTTGTTACCTCCGCACCGATTCTAGGAGCTGGACAGTGTGCATACAAAGTTCATTTTCAATGGGATAGTGACATGGGAATTCCAGGAGCATTTTATATTGAGAATTTCATGCTAGGAGAATTTTTTCTTGTAAGTTTAACACTTGAAGATATTCCTAACCATGGAACCATCAACTTTGTTTGCAACTCATGGATTTACAACTGTCGAAAGTACAAAACTGAACGCATTTTCTTTGCCAACAAGACATATCTTCCAAGTGAAACACCAGCTCCATTAGTCTACTATAGACAAGAAGAACTGAAGACTTTACGAGGAGATGGGACAGGTAAACGTGAAGAATGGGAAAGGATCTATGACTATGATGTCTACAATGATGTGGGTGATCCTGATAGAAAAGCTAGCTTAGCTCGTCCCGTTATTGGAGGATCCAACACCTTGCCTTACCCTCGAAGGGGGAGAACCGGCAGGAAACCAGCTAAGAAAGATCCTAAAAGTGAGAGACGGAGCGAGTATATTTATCTTCCAAGAGATGAATCATTTGGTCACTTGAAGTCATCAGACTTTCTTGTTTACATACTTAAATCAGTATCTCAGAATGTCATACCTACATTAACATCTGCACTTACATTACAATTCAACAAGCCAGAGTTTAACACCTTTAATGATGTGCGTGCATTTTACGAGGGTGGAATTAAACTGCATACTAATGAACTTAGCAAACTTAGCCCTATACCATTGTTCAAGGAACTCCTCAGAACTGATGGTGAAGCACCCCTTAAGTTTCCACCACCTAAAATCATTCAAGTGAATCAATCTGGATGGATGACTGATGAAGAATTTACAAGAGAGATGATTGCTGGTGTGAATCCTCACATTATCAAAAGAATTCAGGAATTTCCACCAAAGAGCAAGCTAGATAGGCAACTCTACGGCGATAATACCAGCACAATAACAAAAGAACAGCTTCAACAAAACATGGGTGGGATCACAGTTGAACAAGCTATCGAAACCAACAAATTGTACATACTTGATCACCATGACTCAATATATCCATATCTGAGGAAAATAAATGCAGCTGATACAAAGGCATATGCTACGAGAACCTTCCTTTTCTTACAAAATGATGGAACTTTGAAGCCATTGGCCATTGAGCTAAGCAGCCCACATCCTCAGGCTGATAGCTTTGGTCCTGTTAGTGATATTTACTTTCCTGCAAGTGAAGGTGTTGAAGCTTCAATTTGGCTCCTTGCTAAAGCTTATGTAGTTGTAAACGACTCGTGCCATCACCAACTCATCAGCCATTGGTTGAACACTCATGCTGTTGTTGAGCCATTCATCATAGCAACAAATAGGCATCTTAGTGTGGTTCATCCTATTCATAAGCTTTTACTTCCGCACTATCGTGACACAATGAACATTAATGCACTTGCAAGGAGTGTCTTGGTAAATGCAGAGGGTGTTATTGAGAAGACGTTCTTGATGGGAAGTTATTCTCTAGAATTGTCTGCTGTATTATATAAGGATTGGGTTTTCACTGAGCAAGGTTTGCCTAATGATCTACTCAAAAGAGGTGTGGCTGTTAAGGATCCTACTTCCCCACACGGCCTTCGCCTTCTGATAGAGGACTACCCTTTTGCTGCTGATGGATTAGAGATATGGGCTGTGCTTAAGTCATGGGTTGAAGAATATGTGAATTTCTACTACAAGTCAGATGCAAATATTGCACAAGATTCTGAACTCCAAGCATTTTGGAAAGAACTTGTAGAGGTTGGTCACGGTGACTTGAAAAATGCAACATGGTGGGTTAAGATGCAAACTCGTACAGAGTTGATTGACACTTGCACCACCCTCATATGGATTGCTTCAGCACTTCATGCAGCTGTTAATTTTGGACAATATCCGTACGGAGGTTACATTCTTAACCGACCAACTAAAAGCAGAAGATTAATGCCTAAGAAAGGATCCCCCGAGTATGATGAGCTTTCTAAGAACTATCAAAAGGCGTTTTTGAGAACAATCACACCAAAAAATGACACCCTAATTGACTTGACCATTATAGAGGTCTTGTCAAGACATGCTTCTGATGAACAATACCTCGGACAGAGAATTGAAGGTGATCTTTGGACTTCTGATTCACAACCATTAGAGGCTTTCAAGAGATTTGGAACAAAGTTGGCTGAAATTGAACAAAAACTCACTCAAAGGAACAATGATGAGACTCTAAGGAATCGATATGGACCGGTTAAGATGCCGTATACTTTGCTTTATCCTTCAAGTGAGGAAGGATTGACTTGCAGAGGCATTCCTAATAGTATCTCCATCTAA
Protein sequence

>Msa1233560

MFSFHRSQKVKGTVILMHRNVLDINALTAGLNITGGFKVLGNLTSSIFDTYGSILGRSVALRLISATSADESGKGKVGKRSFLEGFVTSAPILGAGQCAYKVHFQWDSDMGIPGAFYIENFMLGEFFLVSLTLEDIPNHGTINFVCNSWIYNCRKYKTERIFFANKTYLPSETPAPLVYYRQEELKTLRGDGTGKREEWERIYDYDVYNDVGDPDRKASLARPVIGGSNTLPYPRRGRTGRKPAKKDPKSERRSEYIYLPRDESFGHLKSSDFLVYILKSVSQNVIPTLTSALTLQFNKPEFNTFNDVRAFYEGGIKLHTNELSKLSPIPLFKELLRTDGEAPLKFPPPKIIQVNQSGWMTDEEFTREMIAGVNPHIIKRIQEFPPKSKLDRQLYGDNTSTITKEQLQQNMGGITVEQAIETNKLYILDHHDSIYPYLRKINAADTKAYATRTFLFLQNDGTLKPLAIELSSPHPQADSFGPVSDIYFPASEGVEASIWLLAKAYVVVNDSCHHQLISHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARSVLVNAEGVIEKTFLMGSYSLELSAVLYKDWVFTEQGLPNDLLKRGVAVKDPTSPHGLRLLIEDYPFAADGLEIWAVLKSWVEEYVNFYYKSDANIAQDSELQAFWKELVEVGHGDLKNATWWVKMQTRTELIDTCTTLIWIASALHAAVNFGQYPYGGYILNRPTKSRRLMPKKGSPEYDELSKNYQKAFLRTITPKNDTLIDLTIIEVLSRHASDEQYLGQRIEGDLWTSDSQPLEAFKRFGTKLAEIEQKLTQRNNDETLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI*