AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1178100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1178100 MtrunA17_Chr8g0348951 94.161 274 8 1 1 266 48 321 0.0 530
Msa1178100 MtrunA17_Chr7g0247741 78.889 270 48 2 1 262 49 317 3.74e-160 447
Msa1178100 MtrunA17_Chr4g0004071 31.538 260 159 6 12 262 65 314 8.14e-35 127
Msa1178100 MtrunA17_Chr4g0004061 31.679 262 157 7 12 262 65 315 2.92e-33 123
Msa1178100 MtrunA17_Chr3g0125421 36.170 188 111 4 64 247 155 337 1.90e-28 111
Msa1178100 MtrunA17_Chr7g0233661 42.276 123 67 2 92 214 2 120 2.15e-28 106
Msa1178100 MtrunA17_Chr4g0045431 35.673 171 96 6 73 238 166 327 9.62e-28 109
Msa1178100 MtrunA17_Chr1g0162361 39.157 166 86 6 90 251 175 329 1.15e-27 108
Msa1178100 MtrunA17_Chr1g0204181 38.418 177 97 4 74 247 193 360 2.16e-27 108
Msa1178100 MtrunA17_Chr5g0394071 38.158 152 85 4 63 214 4 146 2.32e-27 104
Msa1178100 MtrunA17_Chr4g0045441 33.333 183 107 5 73 251 166 337 5.26e-27 107
Msa1178100 MtrunA17_Chr6g0474391 37.931 174 102 3 74 247 198 365 1.43e-26 106
Msa1178100 MtrunA17_Chr8g0351101 36.782 174 104 3 74 247 187 354 1.61e-26 106
Msa1178100 MtrunA17_Chr4g0037611 38.060 134 78 3 74 207 1 129 2.72e-26 101
Msa1178100 MtrunA17_Chr4g0009561 30.566 265 163 6 1 250 55 313 1.31e-25 102
Msa1178100 MtrunA17_Chr8g0384461 31.609 174 114 3 74 247 178 346 3.46e-25 102
Msa1178100 MtrunA17_Chr1g0162351 33.149 181 110 6 74 252 212 383 8.79e-25 101
Msa1178100 MtrunA17_Chr1g0148781 29.249 253 159 7 1 240 59 304 1.31e-24 100
Msa1178100 MtrunA17_Chr3g0130391 33.333 174 110 3 74 247 200 367 1.52e-24 100
Msa1178100 MtrunA17_Chr1g0162321 33.149 181 110 6 74 252 212 383 4.31e-24 100
Msa1178100 MtrunA17_Chr4g0045471 32.778 180 102 7 73 244 166 334 8.29e-24 98.6
Msa1178100 MtrunA17_Chr3g0138351 29.811 265 163 7 10 262 64 317 1.42e-23 97.4
Msa1178100 MtrunA17_Chr1g0191201 32.000 200 122 6 53 247 164 354 1.64e-23 98.2
Msa1178100 MtrunA17_Chr4g0009541 28.516 256 168 7 10 253 61 313 2.27e-23 96.7
Msa1178100 MtrunA17_Chr5g0407781 28.916 249 159 6 1 241 43 281 5.44e-23 95.5
Msa1178100 MtrunA17_Chr4g0045451 31.214 173 107 4 73 241 166 330 5.97e-23 96.3
Msa1178100 MtrunA17_Chr4g0045411 39.416 137 71 5 73 205 165 293 8.39e-23 95.9
Msa1178100 MtrunA17_Chr3g0093741 42.241 116 66 1 126 240 222 337 2.99e-22 94.4
Msa1178100 MtrunA17_Chr7g0256741 26.721 247 170 7 1 240 55 297 5.45e-22 93.2
Msa1178100 MtrunA17_Chr8g0384481 32.948 173 111 4 74 246 189 356 7.11e-22 93.6
Msa1178100 MtrunA17_Chr2g0319491 39.007 141 80 4 74 214 154 288 7.29e-22 92.8
Msa1178100 MtrunA17_Chr7g0239101 33.889 180 107 6 87 264 189 358 1.02e-21 92.8
Msa1178100 MtrunA17_Chr3g0093761 41.379 116 67 1 126 240 221 336 1.31e-21 92.4
Msa1178100 MtrunA17_Chr8g0336751 43.103 116 62 3 128 240 266 380 1.91e-21 92.4
Msa1178100 MtrunA17_Chr2g0311691 35.583 163 94 4 86 241 196 354 2.59e-21 92.0
Msa1178100 MtrunA17_Chr3g0092531 39.496 119 70 2 128 245 178 295 3.19e-21 90.9
Msa1178100 MtrunA17_Chr2g0311701 42.520 127 65 3 128 247 241 366 3.36e-21 91.7
Msa1178100 MtrunA17_Chr7g0235951 33.146 178 99 6 73 240 189 356 4.21e-21 91.3
Msa1178100 MtrunA17_Chr2g0311741 36.774 155 93 4 84 237 158 308 5.78e-21 90.5
Msa1178100 MtrunA17_Chr8g0336631 42.241 116 63 3 128 240 234 348 7.22e-21 90.5
Msa1178100 MtrunA17_Chr8g0336801 38.793 116 67 2 128 240 25 139 1.78e-20 85.5
Msa1178100 MtrunA17_Chr2g0311681 33.742 163 97 4 86 241 196 354 3.33e-20 89.0
Msa1178100 MtrunA17_Chr8g0336781 38.983 118 68 3 128 242 269 385 3.35e-20 89.0
Msa1178100 MtrunA17_Chr8g0348081 32.558 172 107 4 74 242 184 349 4.87e-20 88.2
Msa1178100 MtrunA17_Chr3g0092581 36.975 119 73 2 128 245 50 167 4.92e-20 85.1
Msa1178100 MtrunA17_Chr2g0311711 41.935 124 67 3 128 247 239 361 5.84e-20 88.2
Msa1178100 MtrunA17_Chr2g0311761 38.028 142 77 6 105 240 219 355 7.23e-20 87.8
Msa1178100 MtrunA17_Chr2g0332191 28.175 252 163 6 1 238 87 334 8.81e-20 87.8
Msa1178100 MtrunA17_Chr7g0265351 36.090 133 78 2 107 238 192 318 1.44e-19 86.7
Msa1178100 MtrunA17_Chr8g0345831 32.653 147 93 3 92 237 182 323 1.69e-19 86.7
Msa1178100 MtrunA17_Chr1g0161111 34.932 146 80 6 100 238 275 412 2.60e-19 86.7
Msa1178100 MtrunA17_Chr5g0407731 31.953 169 101 4 76 241 152 309 2.94e-19 85.9
Msa1178100 MtrunA17_Chr7g0239071 28.014 282 173 10 1 267 40 306 4.13e-19 85.1
Msa1178100 MtrunA17_Chr6g0486831 36.290 124 74 2 128 247 208 330 4.13e-19 85.5
Msa1178100 MtrunA17_Chr3g0093751 37.931 116 71 1 126 240 222 337 6.20e-19 85.1
Msa1178100 MtrunA17_Chr3g0121141 32.418 182 111 7 64 240 110 284 7.80e-19 84.3
Msa1178100 MtrunA17_Chr7g0239111 31.383 188 113 6 84 267 186 361 9.71e-19 84.7
Msa1178100 MtrunA17_Chr3g0128001 32.105 190 115 6 53 237 137 317 9.96e-19 84.3
Msa1178100 MtrunA17_Chr2g0311831 37.589 141 78 4 105 240 219 354 1.07e-18 84.7
Msa1178100 MtrunA17_Chr8g0336761 51.899 79 37 1 128 206 233 310 1.16e-18 84.3
Msa1178100 MtrunA17_Chr2g0311861 38.793 116 67 2 128 240 216 330 1.21e-18 84.3
Msa1178100 MtrunA17_Chr4g0045461 30.233 172 108 4 77 244 169 332 2.07e-18 83.6
Msa1178100 MtrunA17_Chr4g0075471 33.553 152 93 5 92 240 11 157 2.52e-18 79.7
Msa1178100 MtrunA17_Chr4g0066121 37.795 127 73 4 124 246 230 354 2.64e-18 83.6
Msa1178100 MtrunA17_Chr8g0336851 38.793 116 67 3 128 240 233 347 3.17e-18 83.2
Msa1178100 MtrunA17_Chr2g0311631 37.419 155 89 4 77 224 176 329 3.17e-18 83.2
Msa1178100 MtrunA17_Chr1g0187831 40.870 115 63 2 128 238 242 355 3.49e-18 83.2
Msa1178100 MtrunA17_Chr5g0439011 31.915 188 108 8 64 240 111 289 4.08e-18 82.4
Msa1178100 MtrunA17_Chr4g0055911 28.125 256 154 8 9 241 55 303 4.42e-18 82.4
Msa1178100 MtrunA17_Chr8g0354261 49.367 79 39 1 128 206 242 319 5.06e-18 82.8
Msa1178100 MtrunA17_Chr1g0161081 37.719 114 66 4 128 238 242 353 5.30e-18 82.4
Msa1178100 MtrunA17_Chr1g0161041 38.983 118 67 4 124 238 261 376 7.14e-18 82.4
Msa1178100 MtrunA17_Chr1g0184241 42.149 121 68 2 128 247 239 358 1.16e-17 81.6
Msa1178100 MtrunA17_Chr2g0289341 30.964 197 124 8 50 240 96 286 1.81e-17 80.5
Msa1178100 MtrunA17_Chr4g0068891 31.288 163 106 4 81 239 143 303 2.02e-17 80.5
Msa1178100 MtrunA17_Chr1g0184101 33.333 168 103 5 73 239 162 321 2.28e-17 80.5
Msa1178100 MtrunA17_Chr1g0184151 31.138 167 106 5 72 237 161 319 2.49e-17 80.5
Msa1178100 MtrunA17_Chr1g0148771 27.734 256 163 9 9 252 106 351 2.87e-17 80.5
Msa1178100 MtrunA17_Chr8g0336861 37.069 116 69 3 128 240 234 348 2.90e-17 80.5
Msa1178100 MtrunA17_Chr5g0420721 36.752 117 72 2 124 239 117 232 3.73e-17 79.0
Msa1178100 MtrunA17_Chr7g0239821 31.875 160 104 3 87 245 198 353 3.75e-17 80.1
Msa1178100 MtrunA17_Chr4g0006371 32.370 173 109 5 68 237 183 350 4.61e-17 80.1
Msa1178100 MtrunA17_Chr5g0420881 37.607 117 71 2 124 239 11 126 5.14e-17 75.9
Msa1178100 MtrunA17_Chr1g0187811 42.991 107 55 4 128 229 360 465 5.20e-17 80.5
Msa1178100 MtrunA17_Chr2g0313111 26.335 281 162 9 3 255 65 328 6.06e-17 79.3
Msa1178100 MtrunA17_Chr1g0187821 41.905 105 57 3 128 229 239 342 6.90e-17 79.3
Msa1178100 MtrunA17_Chr8g0354241 46.835 79 41 1 128 206 242 319 8.11e-17 79.3
Msa1178100 MtrunA17_Chr8g0371921 37.226 137 74 4 73 205 164 292 9.48e-17 79.0
Msa1178100 MtrunA17_Chr5g0423201 34.188 117 75 2 124 239 216 331 1.38e-16 78.6
Msa1178100 MtrunA17_Chr2g0293931 27.059 170 117 4 76 239 19 187 2.24e-16 75.9
Msa1178100 MtrunA17_Chr7g0239121 30.808 198 124 7 72 267 172 358 2.66e-16 77.8
Msa1178100 MtrunA17_Chr8g0364471 45.570 79 42 1 128 206 239 316 3.65e-16 77.4
Msa1178100 MtrunA17_Chr2g0296371 27.602 221 138 8 1 207 94 306 4.39e-16 77.0
Msa1178100 MtrunA17_Chr3g0126741 28.352 261 158 11 14 257 116 364 5.23e-16 77.0
Msa1178100 MtrunA17_Chr8g0389941 26.022 269 158 12 9 244 80 340 5.68e-16 76.6
Msa1178100 MtrunA17_Chr1g0167931 48.101 79 40 1 128 206 187 264 6.40e-16 76.3
Msa1178100 MtrunA17_Chr4g0055591 45.570 79 42 1 128 206 228 305 7.15e-16 76.3
Msa1178100 MtrunA17_Chr5g0437181 31.609 174 104 6 73 240 175 339 7.16e-16 76.3
Msa1178100 MtrunA17_Chr3g0105281 34.109 129 73 4 128 255 202 319 1.06e-15 75.5
Msa1178100 MtrunA17_Chr1g0194321 30.216 139 87 1 109 237 175 313 1.50e-15 75.5
Msa1178100 MtrunA17_Chr5g0407591 33.333 96 62 1 156 249 5 100 1.62e-15 70.9
Msa1178100 MtrunA17_Chr7g0225881 33.939 165 91 8 70 232 182 330 1.70e-15 75.5
Msa1178100 MtrunA17_Chr5g0412681 29.240 171 108 5 73 239 153 314 1.94e-15 75.1
Msa1178100 MtrunA17_Chr6g0472861 36.667 120 71 4 128 243 241 359 2.05e-15 75.1
Msa1178100 MtrunA17_Chr3g0113641 34.043 141 76 6 73 206 176 306 3.08e-15 74.7
Msa1178100 MtrunA17_Chr5g0412651 31.361 169 107 5 73 239 166 327 3.71e-15 74.3
Msa1178100 MtrunA17_Chr7g0235981 40.741 108 57 3 128 229 193 299 4.06e-15 73.9
Msa1178100 MtrunA17_Chr1g0167951 37.069 116 69 3 128 240 224 338 6.35e-15 73.6
Msa1178100 MtrunA17_Chr4g0052251 29.730 148 98 4 93 237 169 313 6.41e-15 73.6
Msa1178100 MtrunA17_Chr3g0126761 37.288 118 72 2 128 245 105 220 7.15e-15 72.0
Msa1178100 MtrunA17_Chr8g0371931 34.307 137 78 4 73 205 164 292 7.37e-15 73.6
Msa1178100 MtrunA17_Chr5g0423221 27.897 233 123 10 11 238 162 354 7.57e-15 73.6
Msa1178100 MtrunA17_Chr2g0319521 33.645 107 65 3 72 178 24 124 8.38e-15 69.7
Msa1178100 MtrunA17_Chr5g0412671 30.899 178 114 5 73 248 166 336 9.25e-15 73.2
Msa1178100 MtrunA17_Chr5g0426891 30.769 130 88 2 126 254 211 339 9.50e-15 73.2
Msa1178100 MtrunA17_Chr2g0311921 41.121 107 51 4 105 206 205 304 1.20e-14 72.8
Msa1178100 MtrunA17_Chr7g0242551 31.214 173 107 5 73 240 180 345 1.20e-14 72.8
Msa1178100 MtrunA17_Chr5g0420951 39.623 106 57 4 102 205 203 303 1.44e-14 72.8
Msa1178100 MtrunA17_Chr1g0167961 46.835 79 41 1 128 206 241 318 1.57e-14 72.8
Msa1178100 MtrunA17_Chr1g0184121 31.646 158 102 4 72 229 160 311 1.58e-14 72.4
Msa1178100 MtrunA17_Chr5g0420981 33.333 117 76 2 124 239 222 337 1.60e-14 72.4
Msa1178100 MtrunA17_Chr1g0184161 29.940 167 108 5 72 237 161 319 1.88e-14 72.0
Msa1178100 MtrunA17_Chr7g0266651 42.169 83 46 2 124 205 226 307 1.92e-14 72.4
Msa1178100 MtrunA17_Chr7g0232161 37.143 105 61 3 87 190 194 294 2.07e-14 72.0
Msa1178100 MtrunA17_Chr8g0365241 38.983 118 64 5 102 217 207 318 2.07e-14 72.0
Msa1178100 MtrunA17_Chr2g0285931 29.032 186 112 7 82 251 151 332 3.16e-14 71.6
Msa1178100 MtrunA17_Chr5g0421101 31.579 190 109 8 79 266 182 352 4.23e-14 71.2
Msa1178100 MtrunA17_Chr4g0053251 33.333 132 81 3 76 206 154 279 4.69e-14 70.9
Msa1178100 MtrunA17_Chr8g0370711 33.333 177 103 8 77 248 180 346 5.02e-14 70.9
Msa1178100 MtrunA17_Chr5g0424201 30.769 182 109 6 64 238 156 327 6.48e-14 70.5
Msa1178100 MtrunA17_Chr8g0375601 26.639 244 150 9 13 239 103 334 6.69e-14 70.9
Msa1178100 MtrunA17_Chr3g0145171 33.537 164 93 7 74 231 177 330 6.94e-14 70.5
Msa1178100 MtrunA17_Chr5g0421091 39.623 106 57 4 102 205 195 295 7.11e-14 70.5
Msa1178100 MtrunA17_Chr1g0184111 30.120 166 110 4 73 238 161 320 8.21e-14 70.5
Msa1178100 MtrunA17_Chr4g0055871 26.953 256 152 8 9 241 55 298 8.24e-14 70.1
Msa1178100 MtrunA17_Chr8g0336871 35.252 139 73 6 113 247 40 165 8.96e-14 67.8
Msa1178100 MtrunA17_Chr1g0167911 43.038 79 44 1 128 206 225 302 1.11e-13 70.1
Msa1178100 MtrunA17_Chr7g0239091 29.078 141 94 4 106 245 304 439 1.84e-13 69.7
Msa1178100 MtrunA17_Chr3g0102041 31.008 129 85 3 128 253 214 341 2.09e-13 69.3
Msa1178100 MtrunA17_Chr7g0265221 32.847 137 86 4 124 255 248 383 2.55e-13 68.9
Msa1178100 MtrunA17_Chr5g0420901 38.679 106 58 4 102 205 195 295 2.56e-13 68.9
Msa1178100 MtrunA17_Chr3g0087031 28.108 185 107 9 64 237 172 341 2.93e-13 68.9
Msa1178100 MtrunA17_Chr5g0423191 32.479 117 77 2 124 239 215 330 3.02e-13 68.9
Msa1178100 MtrunA17_Chr5g0421011 40.964 83 47 2 124 205 215 296 3.60e-13 68.6
Msa1178100 MtrunA17_Chr6g0455481 38.835 103 61 2 128 229 213 314 3.63e-13 68.6
Msa1178100 MtrunA17_Chr8g0375671 34.074 135 76 6 110 239 213 339 4.25e-13 68.6
Msa1178100 MtrunA17_Chr7g0220011 34.211 114 73 2 128 240 209 321 4.38e-13 68.2
Msa1178100 MtrunA17_Chr1g0158011 27.717 184 118 5 74 247 73 251 4.71e-13 67.4
Msa1178100 MtrunA17_Chr5g0421041 30.769 117 79 2 124 239 213 328 4.86e-13 68.2
Msa1178100 MtrunA17_Chr5g0420941 32.143 140 88 4 102 239 194 328 5.60e-13 67.8
Msa1178100 MtrunA17_Chr5g0405411 41.772 79 45 1 128 205 214 292 6.00e-13 67.8
Msa1178100 MtrunA17_Chr8g0370721 31.387 137 88 4 113 246 214 347 6.27e-13 67.8
Msa1178100 MtrunA17_Chr2g0314401 29.060 117 81 2 124 239 221 336 7.43e-13 67.8
Msa1178100 MtrunA17_Chr3g0125201 32.479 117 74 3 126 238 172 287 7.81e-13 67.4
Msa1178100 MtrunA17_Chr4g0064781 38.686 137 79 3 94 229 190 322 1.10e-12 67.0
Msa1178100 MtrunA17_Chr4g0050031 29.000 200 129 7 50 245 164 354 1.45e-12 66.6
Msa1178100 MtrunA17_Chr5g0423251 30.769 117 79 2 124 239 215 330 2.16e-12 66.2
Msa1178100 MtrunA17_Chr1g0162191 37.931 87 52 2 124 209 217 302 2.17e-12 66.2
Msa1178100 MtrunA17_Chr8g0375681 31.111 135 82 4 109 239 140 267 2.46e-12 65.5
Msa1178100 MtrunA17_Chr7g0250511 26.842 190 128 6 64 249 163 345 2.55e-12 65.9
Msa1178100 MtrunA17_Chr3g0109041 28.994 169 112 4 73 238 170 333 2.60e-12 65.9
Msa1178100 MtrunA17_Chr5g0424211 29.371 143 96 3 64 205 156 294 2.67e-12 65.9
Msa1178100 MtrunA17_Chr8g0375701 32.061 131 84 3 126 252 224 353 3.81e-12 65.5
Msa1178100 MtrunA17_Chr1g0179801 28.800 125 88 1 124 248 241 364 4.71e-12 65.5
Msa1178100 MtrunA17_Chr2g0311611 45.000 60 27 1 124 177 11 70 7.03e-12 59.7
Msa1178100 MtrunA17_Chr3g0145181 32.558 129 80 4 103 229 205 328 7.94e-12 64.7
Msa1178100 MtrunA17_Chr8g0375571 36.842 95 57 3 124 217 217 309 9.74e-12 64.3
Msa1178100 MtrunA17_Chr7g0247991 34.483 174 98 6 73 238 189 354 1.02e-11 64.3
Msa1178100 MtrunA17_Chr5g0423211 31.655 139 87 5 102 238 199 331 1.41e-11 63.9
Msa1178100 MtrunA17_Chr2g0314381 32.609 92 60 2 124 214 247 337 1.59e-11 63.9
Msa1178100 MtrunA17_Chr7g0236011 33.146 178 99 6 73 240 189 356 2.31e-11 63.2
Msa1178100 MtrunA17_Chr2g0314391 36.905 84 51 2 124 206 240 322 3.35e-11 62.8
Msa1178100 MtrunA17_Chr8g0358941 30.508 118 74 2 93 205 167 281 3.89e-11 62.4
Msa1178100 MtrunA17_Chr3g0145201 31.884 138 87 4 94 229 831 963 5.36e-11 62.8
Msa1178100 MtrunA17_Chr1g0170631 33.898 118 76 2 128 244 62 178 5.46e-11 60.5
Msa1178100 MtrunA17_Chr8g0335411 33.140 172 103 5 73 238 189 354 8.81e-11 61.6
Msa1178100 MtrunA17_Chr3g0114861 30.000 140 87 4 109 245 197 328 9.50e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1178100 AT4G23340.1 58.394 274 95 5 3 263 50 317 1.85e-108 317
Msa1178100 AT5G51310.1 50.883 283 114 7 4 265 46 324 1.28e-91 274
Msa1178100 AT4G23340.2 63.265 196 66 3 72 263 6 199 2.15e-88 261
Msa1178100 AT1G52820.1 29.555 247 158 5 12 248 68 308 5.59e-31 117
Msa1178100 AT1G80330.1 29.730 259 159 7 1 241 84 337 1.15e-27 109
Msa1178100 AT1G52790.1 31.092 238 147 7 12 240 62 291 1.84e-26 105
Msa1178100 AT4G25420.1 35.632 174 106 4 74 247 194 361 7.97e-26 104
Msa1178100 AT5G07200.1 36.313 179 100 5 74 247 193 362 1.32e-25 104
Msa1178100 AT1G55290.1 34.545 220 122 7 52 262 155 361 3.13e-25 102
Msa1178100 AT5G51810.1 34.483 174 108 3 74 247 192 359 9.57e-25 102
Msa1178100 AT4G21200.1 37.736 159 91 4 59 214 143 296 1.39e-24 100
Msa1178100 AT1G60980.1 37.853 177 95 5 74 247 194 358 2.46e-24 100
Msa1178100 AT4G03070.1 31.600 250 155 8 12 251 70 313 4.22e-24 99.4
Msa1178100 AT3G19010.1 35.593 177 105 5 77 252 167 335 1.60e-23 98.2
Msa1178100 AT3G19010.4 35.593 177 105 5 77 252 167 335 1.60e-23 98.2
Msa1178100 AT3G13610.1 32.461 191 126 3 52 240 155 344 3.42e-23 97.4
Msa1178100 AT1G52800.1 27.413 259 169 7 12 262 67 314 5.35e-23 96.3
Msa1178100 AT1G15550.1 28.205 273 171 8 1 258 92 354 1.07e-22 95.9
Msa1178100 AT1G44090.1 35.057 174 107 5 74 246 195 363 2.94e-22 95.1
Msa1178100 AT1G80320.1 29.218 243 157 6 10 243 63 299 3.11e-22 94.0
Msa1178100 AT1G50960.1 34.831 178 104 5 80 255 165 332 1.88e-21 92.4
Msa1178100 AT3G12900.1 43.548 124 62 3 116 238 221 337 4.83e-21 91.3
Msa1178100 AT5G43440.1 39.073 151 82 4 94 237 198 345 2.73e-20 89.4
Msa1178100 AT3G19000.1 33.696 184 107 5 73 252 168 340 7.05e-20 88.2
Msa1178100 AT1G80340.1 29.714 175 115 3 74 244 167 337 1.06e-19 87.4
Msa1178100 AT3G19010.3 34.783 161 91 5 100 252 151 305 1.88e-19 86.7
Msa1178100 AT1G06620.1 40.000 120 68 2 124 240 230 348 2.97e-19 86.7
Msa1178100 AT4G10490.1 33.529 170 98 5 78 239 165 327 4.62e-19 85.9
Msa1178100 AT5G43450.1 42.424 132 64 4 94 221 195 318 4.74e-19 85.9
Msa1178100 AT1G05010.1 35.593 177 99 8 73 240 120 290 5.83e-19 85.1
Msa1178100 AT1G04380.1 38.655 119 69 3 124 239 210 327 1.16e-18 84.7
Msa1178100 AT5G05600.1 32.609 184 106 7 73 248 188 361 1.16e-18 84.7
Msa1178100 AT4G21690.1 36.806 144 73 4 74 205 165 302 1.93e-18 84.0
Msa1178100 AT5G59540.1 39.167 120 69 2 124 240 231 349 2.22e-18 84.0
Msa1178100 AT2G30830.1 36.250 160 93 5 73 229 177 330 2.56e-18 84.0
Msa1178100 AT1G03410.2 57.971 69 28 1 124 192 226 293 2.70e-18 83.6
Msa1178100 AT1G03400.1 41.667 120 64 4 73 192 170 283 3.08e-18 83.6
Msa1178100 AT1G03410.1 57.971 69 28 1 124 192 263 330 3.36e-18 84.0
Msa1178100 AT5G59530.1 38.462 117 68 3 124 237 229 344 7.70e-18 82.4
Msa1178100 AT4G03050.2 34.783 138 86 3 128 264 275 409 8.73e-18 82.8
Msa1178100 AT4G03050.1 34.783 138 86 3 128 264 275 409 8.73e-18 82.8
Msa1178100 AT3G11180.1 32.105 190 110 8 68 248 211 390 1.46e-17 82.0
Msa1178100 AT2G34555.1 29.518 166 115 2 73 237 143 307 4.02e-17 80.1
Msa1178100 AT1G52820.2 28.902 173 109 4 12 176 68 234 4.53e-17 79.0
Msa1178100 AT1G78550.2 29.680 219 123 7 21 237 69 258 4.86e-17 79.3
Msa1178100 AT1G62380.1 32.000 175 101 7 73 240 123 286 5.04e-17 79.7
Msa1178100 AT3G11180.2 32.044 181 105 7 68 240 211 381 8.42e-17 79.7
Msa1178100 AT1G78550.1 29.680 219 123 7 21 237 147 336 1.03e-16 79.3
Msa1178100 AT1G04350.1 37.313 134 77 4 74 206 179 306 1.61e-16 78.6
Msa1178100 AT4G10500.1 34.783 161 88 6 80 233 174 324 2.14e-16 78.2
Msa1178100 AT1G30040.1 24.873 197 139 4 46 237 120 312 2.57e-16 77.8
Msa1178100 AT5G12270.1 39.496 119 65 4 128 240 225 342 3.50e-16 77.8
Msa1178100 AT3G61400.1 38.136 118 69 2 124 237 234 351 7.01e-16 77.0
Msa1178100 AT2G30840.1 36.029 136 80 4 73 207 181 310 8.85e-16 76.6
Msa1178100 AT3G55970.1 30.857 175 106 5 73 240 178 344 8.90e-16 76.6
Msa1178100 AT1G12010.1 30.994 171 100 7 77 240 127 286 9.72e-16 76.3
Msa1178100 AT1G47990.1 31.915 141 86 3 109 239 161 301 1.18e-15 75.9
Msa1178100 AT1G77330.1 31.285 179 109 7 72 245 124 293 1.25e-15 75.5
Msa1178100 AT1G78440.1 26.341 205 135 5 38 237 109 302 1.67e-15 75.5
Msa1178100 AT3G21420.1 29.032 248 137 13 13 237 111 342 1.72e-15 75.9
Msa1178100 AT5G24530.1 31.633 196 115 8 53 239 137 322 2.05e-15 75.5
Msa1178100 AT2G38240.1 31.633 196 119 6 47 237 146 331 2.87e-15 75.1
Msa1178100 AT1G15540.1 38.393 112 66 3 132 242 191 300 7.00e-15 73.6
Msa1178100 AT1G15540.4 38.393 112 66 3 132 242 191 300 7.00e-15 73.6
Msa1178100 AT1G15540.3 38.393 112 66 3 132 242 198 307 7.38e-15 73.6
Msa1178100 AT1G15540.2 38.393 112 66 3 132 242 194 303 7.59e-15 73.6
Msa1178100 AT3G51240.2 34.328 134 79 3 78 205 77 207 8.34e-15 72.8
Msa1178100 AT3G51240.1 28.378 222 131 6 1 205 81 291 8.83e-15 73.6
Msa1178100 AT1G28030.1 28.099 242 160 10 9 240 66 303 1.10e-14 73.2
Msa1178100 AT4G25310.1 39.316 117 60 5 91 205 194 301 1.25e-14 73.2
Msa1178100 AT4G25300.2 38.462 117 61 5 91 205 103 210 1.73e-14 71.6
Msa1178100 AT1G06650.2 33.094 139 86 4 106 240 217 352 2.27e-14 72.4
Msa1178100 AT3G46500.5 26.953 256 158 7 9 241 63 312 2.36e-14 72.0
Msa1178100 AT3G49620.1 32.298 161 100 4 47 206 154 306 2.61e-14 72.4
Msa1178100 AT5G43440.2 46.237 93 43 3 94 182 198 287 3.77e-14 71.2
Msa1178100 AT2G44800.1 28.090 178 120 4 70 244 169 341 3.86e-14 71.6
Msa1178100 AT4G25300.1 38.462 117 61 5 91 205 197 304 4.74e-14 71.6
Msa1178100 AT3G46500.4 28.022 182 121 4 64 241 1 176 6.48e-14 68.9
Msa1178100 AT5G58660.1 35.404 161 92 8 62 218 163 315 8.30e-14 70.9
Msa1178100 AT3G50210.2 33.577 137 82 4 75 206 71 203 9.23e-14 69.7
Msa1178100 AT1G17020.1 37.607 117 63 5 91 205 198 306 1.02e-13 70.5
Msa1178100 AT1G03400.2 33.108 148 65 5 73 192 170 311 1.86e-13 70.1
Msa1178100 AT3G46500.10 27.660 188 126 4 58 241 57 238 1.92e-13 68.6
Msa1178100 AT3G46500.1 27.660 188 126 4 58 241 57 238 1.92e-13 68.6
Msa1178100 AT3G50210.4 33.577 137 82 4 75 206 153 285 2.43e-13 69.3
Msa1178100 AT3G50210.1 33.577 137 82 4 75 206 153 285 2.43e-13 69.3
Msa1178100 AT3G50210.3 33.577 137 82 4 75 206 153 285 2.43e-13 69.3
Msa1178100 AT3G49630.1 33.577 137 75 4 76 206 155 281 3.42e-13 68.9
Msa1178100 AT3G49630.2 33.577 137 75 4 76 206 82 208 3.47e-13 68.2
Msa1178100 AT4G16765.6 25.822 213 139 7 41 241 34 239 4.29e-13 67.8
Msa1178100 AT4G16765.1 25.822 213 139 7 41 241 34 239 4.29e-13 67.8
Msa1178100 AT4G16765.2 25.822 213 139 7 41 241 34 239 4.29e-13 67.8
Msa1178100 AT3G49630.3 33.577 137 75 4 76 206 151 277 4.71e-13 68.6
Msa1178100 AT3G60290.1 26.667 180 120 4 70 244 169 341 5.57e-13 68.6
Msa1178100 AT1G14130.1 33.582 134 82 4 102 232 149 278 5.67e-13 68.2
Msa1178100 AT5G43450.2 46.067 89 41 3 94 178 195 280 5.83e-13 67.8
Msa1178100 AT2G36690.2 33.333 102 67 1 128 229 235 335 7.66e-13 68.2
Msa1178100 AT2G36690.1 33.333 102 67 1 128 229 235 335 7.66e-13 68.2
Msa1178100 AT5G20400.1 36.449 107 66 2 124 229 217 322 8.19e-13 67.8
Msa1178100 AT2G25450.1 45.122 82 39 3 128 206 227 305 9.00e-13 67.8
Msa1178100 AT4G16765.5 30.769 130 81 3 118 241 67 193 1.47e-12 65.5
Msa1178100 AT1G02400.1 27.092 251 146 8 13 239 74 311 1.53e-12 67.0
Msa1178100 AT5G08640.2 29.586 169 114 3 77 245 169 332 1.63e-12 67.0
Msa1178100 AT5G08640.1 29.586 169 114 3 77 245 169 332 1.63e-12 67.0
Msa1178100 AT4G16765.3 28.249 177 108 7 41 205 34 203 2.41e-12 65.5
Msa1178100 AT1G06645.1 33.884 121 75 4 124 240 243 362 3.16e-12 66.2
Msa1178100 AT1G06640.1 34.711 121 74 3 124 240 233 352 3.21e-12 66.2
Msa1178100 AT3G47190.1 30.909 165 92 8 74 237 164 307 4.43e-12 65.5
Msa1178100 AT5G63590.1 32.184 174 106 5 72 241 135 300 4.83e-12 65.5
Msa1178100 AT5G07480.2 28.788 198 131 5 65 257 52 244 6.62e-12 64.3
Msa1178100 AT1G17010.1 26.749 243 150 9 13 238 108 339 8.51e-12 65.1
Msa1178100 AT5G07480.1 28.061 196 126 5 73 257 162 353 9.27e-12 64.7
Msa1178100 AT1G35190.2 30.400 125 82 2 121 241 168 291 1.37e-11 63.9
Msa1178100 AT1G35190.1 30.400 125 82 2 121 241 191 314 1.55e-11 63.9
Msa1178100 AT1G06620.2 54.545 55 24 1 124 178 230 283 1.66e-11 63.5
Msa1178100 AT1G14120.2 33.621 116 75 2 128 241 171 286 1.91e-11 63.5
Msa1178100 AT1G14120.1 33.621 116 75 2 128 241 171 286 1.91e-11 63.5
Msa1178100 AT1G14120.3 33.621 116 75 2 128 241 171 286 1.91e-11 63.5
Msa1178100 AT1G04380.2 40.659 91 47 3 94 180 178 265 2.66e-11 62.8
Msa1178100 AT5G54000.1 33.333 126 81 3 124 248 138 261 3.08e-11 62.8
Msa1178100 AT5G59540.2 50.909 55 26 1 124 178 231 284 4.52e-11 62.4
Msa1178100 AT3G46480.1 30.508 118 77 2 128 241 156 272 5.10e-11 62.0
Msa1178100 AT5G54000.2 33.333 126 81 3 124 248 218 341 5.41e-11 62.4
Msa1178100 AT5G63600.2 24.696 247 171 8 1 238 71 311 5.62e-11 62.4

Find 35 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGGATGAGAAAGTGATTT+TGG 0.209683 8_1:-10742649 Msa1178100:CDS
TTTGAGAGTCTTAGAGTTGA+TGG 0.277374 8_1:-10743919 Msa1178100:CDS
TGAAAACACATGAAGGAAAA+TGG 0.283049 8_1:-10742821 Msa1178100:CDS
ATCTTATACCAAGATGAAAT+TGG 0.327780 8_1:-10742855 Msa1178100:CDS
CCATCTCCAACAACTTCATT+TGG 0.346444 8_1:+10742624 None:intergenic
GCCAAAGAAAATCTATCAAC+AGG 0.402427 8_1:+10742687 None:intergenic
TTAGCAGATACATAAAAGTT+AGG 0.429591 8_1:+10743895 None:intergenic
GAAGTCCTCCAATTTCATCT+TGG 0.437867 8_1:+10742847 None:intergenic
AGAGGAAGGTTTGAAAAGGT+TGG 0.443031 8_1:-10742537 Msa1178100:CDS
GAGAGAATAATCAAAGAGGA+AGG 0.444473 8_1:-10742551 Msa1178100:CDS
GAAGATCAAGTTGAAGGACT+TGG 0.452714 8_1:-10742906 Msa1178100:CDS
GGGTCATTAGTGGTAAATAT+TGG 0.455513 8_1:-10742777 Msa1178100:CDS
TTGGCACCAAATGAAGTTGT+TGG 0.459765 8_1:-10742630 Msa1178100:CDS
AAGCTTGTGTTAATGAGCTT+AGG 0.470070 8_1:-10743026 Msa1178100:CDS
TCCTTCTGAAGGGTCATTAG+TGG 0.488539 8_1:-10742787 Msa1178100:CDS
ACTCTAAGACTCTCAAAGAA+TGG 0.491173 8_1:+10743925 None:intergenic
AAATAATCTGAACACACAAA+AGG 0.494776 8_1:+10742582 None:intergenic
GATTTGGAAGATCAAGTTGA+AGG 0.498662 8_1:-10742912 Msa1178100:CDS
TCAAAGAGGAAGGTTTGAAA+AGG 0.502768 8_1:-10742541 Msa1178100:CDS
CCAAATGAAGTTGTTGGAGA+TGG 0.511109 8_1:-10742624 Msa1178100:CDS
CTTGGAGTAATGATAAGTTA+CGG 0.550768 8_1:-10742740 Msa1178100:CDS
TTTAGAGAGAATAATCAAAG+AGG 0.551669 8_1:-10742555 Msa1178100:CDS
TCTGATACTAAACTTAAACT+TGG 0.555324 8_1:-10743994 Msa1178100:CDS
AGTTTAAGTTTAGTATCAGA+AGG 0.561095 8_1:+10743997 None:intergenic
CTTCAAGTGAAAACACATGA+AGG 0.568959 8_1:-10742828 Msa1178100:CDS
ACCACTAATGACCCTTCAGA+AGG 0.570837 8_1:+10742786 None:intergenic
TTATACCAAGATGAAATTGG+AGG 0.581682 8_1:-10742852 Msa1178100:CDS
GTGTTAATGAGCTTAGGAGA+AGG 0.583267 8_1:-10743020 Msa1178100:CDS
ATTTAGATAATAAATGAAGC+TGG 0.585134 8_1:+10744034 None:intergenic
TTGGTGATATGATGCAAGCT+TGG 0.588202 8_1:-10742758 Msa1178100:CDS
TTGTTGGAGATGGAAATAAG+AGG 0.590013 8_1:-10742614 Msa1178100:CDS
AATGGAGAAGCAATGAAATG+AGG 0.591887 8_1:+10743943 None:intergenic
AGAGAACTATTGTAGCAAGA+TGG 0.613749 8_1:-10743072 Msa1178100:intron
ATTGATATAAGTCCTTCTGA+AGG 0.616593 8_1:-10742798 Msa1178100:CDS
TTGATATAAGTCCTTCTGAA+GGG 0.631337 8_1:-10742797 Msa1178100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAAGTACTAATGTAAA+AGG + chr8_1:10742735-10742754 None:intergenic 15.0%
!!! ATTAAAAGTACTAATGTAAA+AGG + chr8_1:10742735-10742754 None:intergenic 15.0%
!! ATTTAGATAATAAATGAAGC+TGG + chr8_1:10742505-10742524 None:intergenic 20.0%
!!! TAAGATTTTATAGAAGAGAA+AGG + chr8_1:10742569-10742588 None:intergenic 20.0%
!! AAAAACAGAATTCTAAATTC+AGG - chr8_1:10742687-10742706 Msa1178100:CDS 20.0%
!! ACTTATTTGTGTTTATGTAT+TGG - chr8_1:10742808-10742827 Msa1178100:CDS 20.0%
!! ATTTAGATAATAAATGAAGC+TGG + chr8_1:10742505-10742524 None:intergenic 20.0%
!!! TAAGATTTTATAGAAGAGAA+AGG + chr8_1:10742569-10742588 None:intergenic 20.0%
!! AAAAACAGAATTCTAAATTC+AGG - chr8_1:10742687-10742706 Msa1178100:CDS 20.0%
!! ACTTATTTGTGTTTATGTAT+TGG - chr8_1:10742808-10742827 Msa1178100:CDS 20.0%
!! AGTTTAAGTTTAGTATCAGA+AGG + chr8_1:10742542-10742561 None:intergenic 25.0%
! TCTGATACTAAACTTAAACT+TGG - chr8_1:10742542-10742561 Msa1178100:CDS 25.0%
! TTAGCAGATACATAAAAGTT+AGG + chr8_1:10742644-10742663 None:intergenic 25.0%
! TTAAGTCGTTTATTCAAACA+CGG - chr8_1:10743184-10743203 Msa1178100:intron 25.0%
! AGATTAAAAAAACTAGAGTG+TGG + chr8_1:10743382-10743401 None:intergenic 25.0%
! TCAGAATTCAAAAAATGTCA+AGG - chr8_1:10743561-10743580 Msa1178100:intron 25.0%
! ATCTTATACCAAGATGAAAT+TGG - chr8_1:10743681-10743700 Msa1178100:intron 25.0%
! AAATAATCTGAACACACAAA+AGG + chr8_1:10743957-10743976 None:intergenic 25.0%
! TTTAGAGAGAATAATCAAAG+AGG - chr8_1:10743981-10744000 Msa1178100:CDS 25.0%
!! AGTTTAAGTTTAGTATCAGA+AGG + chr8_1:10742542-10742561 None:intergenic 25.0%
! TCTGATACTAAACTTAAACT+TGG - chr8_1:10742542-10742561 Msa1178100:CDS 25.0%
! TTAGCAGATACATAAAAGTT+AGG + chr8_1:10742644-10742663 None:intergenic 25.0%
! TTAAGTCGTTTATTCAAACA+CGG - chr8_1:10743184-10743203 Msa1178100:intron 25.0%
! AGATTAAAAAAACTAGAGTG+TGG + chr8_1:10743382-10743401 None:intergenic 25.0%
! TCAGAATTCAAAAAATGTCA+AGG - chr8_1:10743561-10743580 Msa1178100:intron 25.0%
! ATCTTATACCAAGATGAAAT+TGG - chr8_1:10743681-10743700 Msa1178100:intron 25.0%
! AAATAATCTGAACACACAAA+AGG + chr8_1:10743957-10743976 None:intergenic 25.0%
! TTTAGAGAGAATAATCAAAG+AGG - chr8_1:10743981-10744000 Msa1178100:CDS 25.0%
!! ATTCGAGTTGAGAGAATTTA+TGG - chr8_1:10742850-10742869 Msa1178100:CDS 30.0%
TAAAAAAACTAGAGTGTGGT+TGG + chr8_1:10743378-10743397 None:intergenic 30.0%
!! ATCACCAGAACTTTTTGATT+TGG - chr8_1:10743608-10743627 Msa1178100:intron 30.0%
TCTTCCAAATCAAAAAGTTC+TGG + chr8_1:10743615-10743634 None:intergenic 30.0%
TTATACCAAGATGAAATTGG+AGG - chr8_1:10743684-10743703 Msa1178100:intron 30.0%
TGAAAACACATGAAGGAAAA+TGG - chr8_1:10743715-10743734 Msa1178100:intron 30.0%
ATTGATATAAGTCCTTCTGA+AGG - chr8_1:10743738-10743757 Msa1178100:intron 30.0%
TTGATATAAGTCCTTCTGAA+GGG - chr8_1:10743739-10743758 Msa1178100:intron 30.0%
CTTGGAGTAATGATAAGTTA+CGG - chr8_1:10743796-10743815 Msa1178100:intron 30.0%
!! ACCTGTTGATAGATTTTCTT+TGG - chr8_1:10743848-10743867 Msa1178100:intron 30.0%
!!! GATTTTCTTTGGCTTTCTTT+TGG - chr8_1:10743859-10743878 Msa1178100:CDS 30.0%
! TATACAGTTAGAGATTTTGC+TGG - chr8_1:10744023-10744042 Msa1178100:CDS 30.0%
!! ATTCGAGTTGAGAGAATTTA+TGG - chr8_1:10742850-10742869 Msa1178100:CDS 30.0%
TAAAAAAACTAGAGTGTGGT+TGG + chr8_1:10743378-10743397 None:intergenic 30.0%
!! ATCACCAGAACTTTTTGATT+TGG - chr8_1:10743608-10743627 Msa1178100:intron 30.0%
TCTTCCAAATCAAAAAGTTC+TGG + chr8_1:10743615-10743634 None:intergenic 30.0%
TTATACCAAGATGAAATTGG+AGG - chr8_1:10743684-10743703 Msa1178100:intron 30.0%
TGAAAACACATGAAGGAAAA+TGG - chr8_1:10743715-10743734 Msa1178100:intron 30.0%
ATTGATATAAGTCCTTCTGA+AGG - chr8_1:10743738-10743757 Msa1178100:intron 30.0%
TTGATATAAGTCCTTCTGAA+GGG - chr8_1:10743739-10743758 Msa1178100:intron 30.0%
CTTGGAGTAATGATAAGTTA+CGG - chr8_1:10743796-10743815 Msa1178100:intron 30.0%
!! ACCTGTTGATAGATTTTCTT+TGG - chr8_1:10743848-10743867 Msa1178100:intron 30.0%
!!! GATTTTCTTTGGCTTTCTTT+TGG - chr8_1:10743859-10743878 Msa1178100:CDS 30.0%
! TATACAGTTAGAGATTTTGC+TGG - chr8_1:10744023-10744042 Msa1178100:CDS 30.0%
AATGGAGAAGCAATGAAATG+AGG + chr8_1:10742596-10742615 None:intergenic 35.0%
!! ACTCTAAGACTCTCAAAGAA+TGG + chr8_1:10742614-10742633 None:intergenic 35.0%
TTTGAGAGTCTTAGAGTTGA+TGG - chr8_1:10742617-10742636 Msa1178100:CDS 35.0%
!! ACTCTAAGCTCTAAGACATA+TGG + chr8_1:10742776-10742795 None:intergenic 35.0%
CTTAGAGCTTAGAGTTTGTA+TGG - chr8_1:10742781-10742800 Msa1178100:CDS 35.0%
ATGGAGAAAGACAACATGTT+TGG - chr8_1:10742869-10742888 Msa1178100:CDS 35.0%
AGAGAACTATTGTAGCAAGA+TGG - chr8_1:10743464-10743483 Msa1178100:intron 35.0%
AAGCTTGTGTTAATGAGCTT+AGG - chr8_1:10743510-10743529 Msa1178100:intron 35.0%
!! GATTTGGAAGATCAAGTTGA+AGG - chr8_1:10743624-10743643 Msa1178100:intron 35.0%
CTTCAAGTGAAAACACATGA+AGG - chr8_1:10743708-10743727 Msa1178100:intron 35.0%
GGGTCATTAGTGGTAAATAT+TGG - chr8_1:10743759-10743778 Msa1178100:intron 35.0%
GCCAAAGAAAATCTATCAAC+AGG + chr8_1:10743852-10743871 None:intergenic 35.0%
! TGAGGATGAGAAAGTGATTT+TGG - chr8_1:10743887-10743906 Msa1178100:CDS 35.0%
TTGTTGGAGATGGAAATAAG+AGG - chr8_1:10743922-10743941 Msa1178100:CDS 35.0%
GAGAGAATAATCAAAGAGGA+AGG - chr8_1:10743985-10744004 Msa1178100:CDS 35.0%
TCAAAGAGGAAGGTTTGAAA+AGG - chr8_1:10743995-10744014 Msa1178100:CDS 35.0%
AATGGAGAAGCAATGAAATG+AGG + chr8_1:10742596-10742615 None:intergenic 35.0%
!! ACTCTAAGACTCTCAAAGAA+TGG + chr8_1:10742614-10742633 None:intergenic 35.0%
TTTGAGAGTCTTAGAGTTGA+TGG - chr8_1:10742617-10742636 Msa1178100:CDS 35.0%
!! ACTCTAAGCTCTAAGACATA+TGG + chr8_1:10742776-10742795 None:intergenic 35.0%
CTTAGAGCTTAGAGTTTGTA+TGG - chr8_1:10742781-10742800 Msa1178100:CDS 35.0%
ATGGAGAAAGACAACATGTT+TGG - chr8_1:10742869-10742888 Msa1178100:CDS 35.0%
AGAGAACTATTGTAGCAAGA+TGG - chr8_1:10743464-10743483 Msa1178100:intron 35.0%
AAGCTTGTGTTAATGAGCTT+AGG - chr8_1:10743510-10743529 Msa1178100:intron 35.0%
!! GATTTGGAAGATCAAGTTGA+AGG - chr8_1:10743624-10743643 Msa1178100:intron 35.0%
CTTCAAGTGAAAACACATGA+AGG - chr8_1:10743708-10743727 Msa1178100:intron 35.0%
GGGTCATTAGTGGTAAATAT+TGG - chr8_1:10743759-10743778 Msa1178100:intron 35.0%
GCCAAAGAAAATCTATCAAC+AGG + chr8_1:10743852-10743871 None:intergenic 35.0%
! TGAGGATGAGAAAGTGATTT+TGG - chr8_1:10743887-10743906 Msa1178100:CDS 35.0%
TTGTTGGAGATGGAAATAAG+AGG - chr8_1:10743922-10743941 Msa1178100:CDS 35.0%
GAGAGAATAATCAAAGAGGA+AGG - chr8_1:10743985-10744004 Msa1178100:CDS 35.0%
TCAAAGAGGAAGGTTTGAAA+AGG - chr8_1:10743995-10744014 Msa1178100:CDS 35.0%
!! AAAGCAGTCTCTGAAGCTTA+TGG + chr8_1:10743001-10743020 None:intergenic 40.0%
CTTATGAACATGTTCCAAGC+TGG + chr8_1:10743210-10743229 None:intergenic 40.0%
GTGTTAATGAGCTTAGGAGA+AGG - chr8_1:10743516-10743535 Msa1178100:intron 40.0%
!! GAAGATCAAGTTGAAGGACT+TGG - chr8_1:10743630-10743649 Msa1178100:intron 40.0%
GAAGTCCTCCAATTTCATCT+TGG + chr8_1:10743692-10743711 None:intergenic 40.0%
! TTGGTGATATGATGCAAGCT+TGG - chr8_1:10743778-10743797 Msa1178100:intron 40.0%
!!! GGCTTTCTTTTGGTGTTTTG+AGG - chr8_1:10743869-10743888 Msa1178100:CDS 40.0%
TTGGCACCAAATGAAGTTGT+TGG - chr8_1:10743906-10743925 Msa1178100:CDS 40.0%
CCATCTCCAACAACTTCATT+TGG + chr8_1:10743915-10743934 None:intergenic 40.0%
CCAAATGAAGTTGTTGGAGA+TGG - chr8_1:10743912-10743931 Msa1178100:CDS 40.0%
AGAGGAAGGTTTGAAAAGGT+TGG - chr8_1:10743999-10744018 Msa1178100:CDS 40.0%
!! AAAGCAGTCTCTGAAGCTTA+TGG + chr8_1:10743001-10743020 None:intergenic 40.0%
CTTATGAACATGTTCCAAGC+TGG + chr8_1:10743210-10743229 None:intergenic 40.0%
GTGTTAATGAGCTTAGGAGA+AGG - chr8_1:10743516-10743535 Msa1178100:intron 40.0%
!! GAAGATCAAGTTGAAGGACT+TGG - chr8_1:10743630-10743649 Msa1178100:intron 40.0%
GAAGTCCTCCAATTTCATCT+TGG + chr8_1:10743692-10743711 None:intergenic 40.0%
! TTGGTGATATGATGCAAGCT+TGG - chr8_1:10743778-10743797 Msa1178100:intron 40.0%
!!! GGCTTTCTTTTGGTGTTTTG+AGG - chr8_1:10743869-10743888 Msa1178100:CDS 40.0%
TTGGCACCAAATGAAGTTGT+TGG - chr8_1:10743906-10743925 Msa1178100:CDS 40.0%
CCATCTCCAACAACTTCATT+TGG + chr8_1:10743915-10743934 None:intergenic 40.0%
CCAAATGAAGTTGTTGGAGA+TGG - chr8_1:10743912-10743931 Msa1178100:CDS 40.0%
AGAGGAAGGTTTGAAAAGGT+TGG - chr8_1:10743999-10744018 Msa1178100:CDS 40.0%
!! TAAGCTCTCTGAAGCAGTCT+CGG + chr8_1:10742933-10742952 None:intergenic 45.0%
AGACTGCTTCAGAGAGCTTA+TGG - chr8_1:10742933-10742952 Msa1178100:CDS 45.0%
TTATTCAAACACGGCCAGCT+TGG - chr8_1:10743193-10743212 Msa1178100:intron 45.0%
! TCCTTCTGAAGGGTCATTAG+TGG - chr8_1:10743749-10743768 Msa1178100:intron 45.0%
ACCACTAATGACCCTTCAGA+AGG + chr8_1:10743753-10743772 None:intergenic 45.0%
!! TAAGCTCTCTGAAGCAGTCT+CGG + chr8_1:10742933-10742952 None:intergenic 45.0%
AGACTGCTTCAGAGAGCTTA+TGG - chr8_1:10742933-10742952 Msa1178100:CDS 45.0%
TTATTCAAACACGGCCAGCT+TGG - chr8_1:10743193-10743212 Msa1178100:intron 45.0%
! TCCTTCTGAAGGGTCATTAG+TGG - chr8_1:10743749-10743768 Msa1178100:intron 45.0%
ACCACTAATGACCCTTCAGA+AGG + chr8_1:10743753-10743772 None:intergenic 45.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 10742494 10744064 10742494 ID=Msa1178100;Name=Msa1178100
chr8_1 mRNA 10742494 10744064 10742494 ID=Msa1178100-mRNA-1;Parent=Msa1178100;Name=Msa1178100-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0|0.5|2|0|267
chr8_1 exon 10743850 10744064 10743850 ID=Msa1178100-mRNA-1:exon:3735;Parent=Msa1178100-mRNA-1
chr8_1 exon 10742494 10743079 10742494 ID=Msa1178100-mRNA-1:exon:3734;Parent=Msa1178100-mRNA-1
chr8_1 CDS 10743850 10744064 10743850 ID=Msa1178100-mRNA-1:cds;Parent=Msa1178100-mRNA-1
chr8_1 CDS 10742494 10743079 10742494 ID=Msa1178100-mRNA-1:cds;Parent=Msa1178100-mRNA-1
Gene Sequence

>Msa1178100

CTTTGTAGCCAGCTTCATTTATTATCTAAATACATATTTAATCTTCCTTCTGATACTAAACTTAAACTTGGTCCTTTCTCTTCTATAAAATCTTACACACCTCATTTCATTGCTTCTCCATTCTTTGAGAGTCTTAGAGTTGATGGACCTAACTTTTATGTATCTGCTAAGAGTTCTGAAGATGTTTTGTTTGAAAAACAGAATTCTAAATTCAGCAAGATGGCAGATTTATCAGAAAGAATTTTAAAGCTTGTGTTAATGAGCTTAGGAGAAGGATTTGAGAAGCTATTTTATGATTCAGAATTCAAAAAATGTCAAGGTTACTTAAGAATAAACAACTATACATCACCAGAACTTTTTGATTTGGAAGATCAAGTTGAAGGACTTGGAATGCACACTGACATGAGCTGCATTACTATCTTATACCAAGATGAAATTGGAGGACTTCAAGTGAAAACACATGAAGGAAAATGGATTGATATAAGTCCTTCTGAAGGGTCATTAGTGGTAAATATTGGTGATATGATGCAAGCTTGGAGTAATGATAAGTTACGGTCTTCTGAACATAGAGTTGTTTTGACACAACCTGTTGATAGATTTTCTTTGGCTTTCTTTTGGTGTTTTGAGGATGAGAAAGTGATTTTGGCACCAAATGAAGTTGTTGGAGATGGAAATAAGAGGATGTATGATCCTTTTGTGTGTTCAGATTATTTGAAGTTTAGAGAGAATAATCAAAGAGGAAGGTTTGAAAAGGTTGGTTATACAGTTAGAGATTTTGCTGGAATTAAGTCTCAAATTATG
Protein sequence

>Msa1178100

LCSQLHLLSKYIFNLPSDTKLKLGPFSSIKSYTPHFIASPFFESLRVDGPNFYVSAKSSEDVLFEKQNSKFSKMADLSERILKLVLMSLGEGFEKLFYDSEFKKCQGYLRINNYTSPELFDLEDQVEGLGMHTDMSCITILYQDEIGGLQVKTHEGKWIDISPSEGSLVVNIGDMMQAWSNDKLRSSEHRVVLTQPVDRFSLAFFWCFEDEKVILAPNEVVGDGNKRMYDPFVCSDYLKFRENNQRGRFEKVGYTVRDFAGIKSQIM