Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181130 | XP_013444159.1 | 94.561 | 478 | 25 | 1 | 1 | 478 | 1 | 477 | 0.0 | 899 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181130 | sp|F4IF99|LPXB_ARATH | 59.395 | 463 | 178 | 4 | 12 | 473 | 6 | 459 | 0.0 | 557 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0672690 | Msa1181130 | 0.821099 | 4.832758e-53 | -8.615850e-47 |
| Msa0249560 | Msa1181130 | 0.804466 | 2.131205e-49 | -8.615850e-47 |
| Msa0585230 | Msa1181130 | 0.836980 | 6.807030e-57 | -8.615850e-47 |
| Msa0931520 | Msa1181130 | 0.817224 | 3.684833e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181130 | MtrunA17_Chr8g0339851 | 94.561 | 478 | 25 | 1 | 1 | 478 | 1 | 477 | 0.0 | 899 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181130 | AT2G04560.1 | 59.395 | 463 | 178 | 4 | 12 | 473 | 6 | 459 | 0.0 | 557 |
Find 110 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAAGAGATGGCGAATTT+AGG | 0.165758 | 8_1:+15435831 | Msa1181130:CDS |
| TAAACCATTCGGTCAAAATA+TGG | 0.204577 | 8_1:-15439168 | None:intergenic |
| ATATCTCAGTGATGGGAATT+TGG | 0.223187 | 8_1:+15436109 | Msa1181130:CDS |
| ATCACTTCCCAATATTCTTT+TGG | 0.225077 | 8_1:+15439219 | Msa1181130:CDS |
| TGTATTAACAGTTGATTCTA+AGG | 0.234708 | 8_1:+15437263 | Msa1181130:CDS |
| GGCTGAATCCAAAAGAATAT+TGG | 0.236518 | 8_1:-15439227 | None:intergenic |
| CATGATTGAAAGAGTGCTTC+AGG | 0.280730 | 8_1:-15439256 | None:intergenic |
| ATTGTTGCCGGCGAGGTTTC+CGG | 0.288963 | 8_1:+15435860 | Msa1181130:CDS |
| TGCAAGAGATGGCGAATTTA+GGG | 0.301664 | 8_1:+15435832 | Msa1181130:CDS |
| GTGCCTGCTGTATTGATTCC+AGG | 0.305125 | 8_1:+15438507 | Msa1181130:CDS |
| GCATTGACTATATTAAACTA+TGG | 0.308940 | 8_1:+15439583 | Msa1181130:CDS |
| AGATGTTATGGAGTTGAATT+TGG | 0.311579 | 8_1:+15437622 | Msa1181130:CDS |
| ATTATGTAGCACCATCATTC+TGG | 0.317124 | 8_1:+15437462 | Msa1181130:CDS |
| GATAAAATTTGTAGATTGAA+TGG | 0.324230 | 8_1:+15437563 | Msa1181130:CDS |
| TGCAAAACCTTTCTCATTGT+TGG | 0.339965 | 8_1:+15435706 | Msa1181130:CDS |
| ACTGTTATTAGCTTGCTTCC+TGG | 0.350190 | 8_1:+15438330 | Msa1181130:CDS |
| TCAGACTTACTTGAGCAATA+AGG | 0.360674 | 8_1:-15439296 | None:intergenic |
| TCCTGTCTTGGAAGATGTTA+TGG | 0.362592 | 8_1:+15437610 | Msa1181130:CDS |
| GGATTATCTGCAACCTTTGT+TGG | 0.368849 | 8_1:+15437584 | Msa1181130:CDS |
| GCTGAATCCAAAAGAATATT+GGG | 0.370279 | 8_1:-15439226 | None:intergenic |
| CCATTCATTGATTGAGCAGT+TGG | 0.372854 | 8_1:-15437831 | None:intergenic |
| TATTAATCATCATGAATAAC+AGG | 0.374109 | 8_1:-15439610 | None:intergenic |
| TATCTCAGTGATGGGAATTT+GGG | 0.375925 | 8_1:+15436110 | Msa1181130:CDS |
| GAAAAGGTTATAAGAGTGTT+TGG | 0.384196 | 8_1:-15435752 | None:intergenic |
| ACCTCTTGTACTCTGCTTCC+AGG | 0.389554 | 8_1:-15438348 | None:intergenic |
| GCAAAACCTTTCTCATTGTT+GGG | 0.389579 | 8_1:+15435707 | Msa1181130:CDS |
| AAAGAGTGCTTCAGGAATAA+TGG | 0.390763 | 8_1:-15439248 | None:intergenic |
| GGAGGTGAAGAAAGGCTTAG+AGG | 0.391546 | 8_1:+15437494 | Msa1181130:CDS |
| TGGTGAATTCAATTTCCATT+TGG | 0.392924 | 8_1:-15435732 | None:intergenic |
| TTCCATTGTATTAGCGAAGA+TGG | 0.394741 | 8_1:-15438385 | None:intergenic |
| TCTCTTGCAGCCATATCTAT+TGG | 0.394822 | 8_1:-15435818 | None:intergenic |
| TTCCATTGCTTCTCGTCTCA+TGG | 0.404421 | 8_1:+15435886 | Msa1181130:CDS |
| AAAGTTGCATTGTGCACATC+CGG | 0.404775 | 8_1:+15439088 | Msa1181130:CDS |
| GTTCAAACCTCCAATAGATA+TGG | 0.412753 | 8_1:+15435808 | Msa1181130:CDS |
| TAGAGGACTGGCAGAATTTG+TGG | 0.429359 | 8_1:+15437511 | Msa1181130:CDS |
| CCAATGCCCGAAAATCGAAC+TGG | 0.449765 | 8_1:-15435935 | None:intergenic |
| TTATGTAGCACCATCATTCT+GGG | 0.449943 | 8_1:+15437463 | Msa1181130:CDS |
| TTGGTTCCCAACAATGAGAA+AGG | 0.450956 | 8_1:-15435713 | None:intergenic |
| CTCAGGTGTGTTGTTCCACC+TGG | 0.456762 | 8_1:-15438525 | None:intergenic |
| TTTCAAATGTTGAAGGTTTG+AGG | 0.462919 | 8_1:+15439659 | Msa1181130:three_prime_UTR |
| CTTTGTTGGACATCCTGTCT+TGG | 0.467487 | 8_1:+15437598 | Msa1181130:CDS |
| AAGTGATATGTATTGTATCT+TGG | 0.470002 | 8_1:-15439203 | None:intergenic |
| CTTGCAGCCATATCTATTGG+AGG | 0.472760 | 8_1:-15435815 | None:intergenic |
| AAACCATTCGGTCAAAATAT+GGG | 0.473562 | 8_1:-15439167 | None:intergenic |
| TTTGTACTTGATAAACCATT+CGG | 0.477381 | 8_1:-15439179 | None:intergenic |
| GATGTGGAAAACTTCATTGC+TGG | 0.481798 | 8_1:+15438465 | Msa1181130:CDS |
| CCTTTCCATGCCCAGAATGA+TGG | 0.484321 | 8_1:-15437473 | None:intergenic |
| GTTCTGCATACTTCCAAATG+AGG | 0.487182 | 8_1:+15437541 | Msa1181130:CDS |
| ATCACTGAGATATCTTCAAT+AGG | 0.489071 | 8_1:-15436099 | None:intergenic |
| AGCAATAAGGCTATGTCTGC+CGG | 0.491452 | 8_1:-15439283 | None:intergenic |
| CACTAAAAGCATCATATCTC+AGG | 0.492012 | 8_1:-15438542 | None:intergenic |
| CTTTCATGTTGCACCTAATG+AGG | 0.492042 | 8_1:+15438443 | Msa1181130:CDS |
| CAGCTCCACAGCAACTGTCC+CGG | 0.496996 | 8_1:-15439107 | None:intergenic |
| TCTCATTGTTGGGAACCAAA+TGG | 0.500942 | 8_1:+15435717 | Msa1181130:CDS |
| ACAGCACTCGGACTATAATC+AGG | 0.506469 | 8_1:-15439556 | None:intergenic |
| AGGAAACATGAGGTGCCTCC+AGG | 0.511862 | 8_1:+15437884 | Msa1181130:CDS |
| TGAAGAAAGGCTTAGAGGAC+TGG | 0.519272 | 8_1:+15437499 | Msa1181130:CDS |
| CCCGAAAATCGAACTGGGAA+AGG | 0.520386 | 8_1:-15435929 | None:intergenic |
| ATCAATGAATGGAGGGCTGA+AGG | 0.523214 | 8_1:+15437842 | Msa1181130:CDS |
| TCCCATCTTCGCTAATACAA+TGG | 0.523384 | 8_1:+15438383 | Msa1181130:CDS |
| TCCATTGTATTAGCGAAGAT+GGG | 0.526179 | 8_1:-15438384 | None:intergenic |
| CCAACTGCTCAATCAATGAA+TGG | 0.527823 | 8_1:+15437831 | Msa1181130:CDS |
| ACGAGAAGCAATGGAATCAC+CGG | 0.531851 | 8_1:-15435879 | None:intergenic |
| GAAATGGTGAAGACTTCCTC+AGG | 0.533796 | 8_1:+15437864 | Msa1181130:CDS |
| TATTGAAGATATCTCAGTGA+TGG | 0.535792 | 8_1:+15436101 | Msa1181130:CDS |
| GTATTAACAGTTGATTCTAA+GGG | 0.537432 | 8_1:+15437264 | Msa1181130:CDS |
| ATGTGGAAAACTTCATTGCT+GGG | 0.538493 | 8_1:+15438466 | Msa1181130:CDS |
| GAATGGAGGGCTGAAGGAAA+TGG | 0.543268 | 8_1:+15437848 | Msa1181130:CDS |
| AGCCATGAGACGAGAAGCAA+TGG | 0.544018 | 8_1:-15435888 | None:intergenic |
| GAAGGAATTGAAGACTTGAG+AGG | 0.544330 | 8_1:-15435639 | None:intergenic |
| GTCAATGCTGCAACAGCACT+CGG | 0.544554 | 8_1:-15439568 | None:intergenic |
| TCCATAACATCTTCCAAGAC+AGG | 0.545112 | 8_1:-15437611 | None:intergenic |
| ATGATTAATACAGAAGCCTC+TGG | 0.545470 | 8_1:+15439623 | Msa1181130:exon |
| ACTCTTTCAATCATGCAAAC+CGG | 0.547046 | 8_1:+15439264 | Msa1181130:CDS |
| CATGGAAAGGAGGTGAAGAA+AGG | 0.547868 | 8_1:+15437486 | Msa1181130:CDS |
| ATAGATATGGCTGCAAGAGA+TGG | 0.548714 | 8_1:+15435821 | Msa1181130:CDS |
| TAGCACCATCATTCTGGGCA+TGG | 0.550692 | 8_1:+15437468 | Msa1181130:CDS |
| TGAAAGACAGTCGTCAATTG+TGG | 0.550753 | 8_1:-15438426 | None:intergenic |
| CTGCTCAATCAATGAATGGA+GGG | 0.552804 | 8_1:+15437835 | Msa1181130:CDS |
| TTGTGGATAATTCTTTCTGA+AGG | 0.555371 | 8_1:-15439502 | None:intergenic |
| GCAGAGTACAAGAGGTCAGT+CGG | 0.558596 | 8_1:+15438355 | Msa1181130:CDS |
| TCATTGCTGGGACCGTTCAA+AGG | 0.562768 | 8_1:+15438478 | Msa1181130:CDS |
| ATTGAAGATATCTCAGTGAT+GGG | 0.571831 | 8_1:+15436102 | Msa1181130:CDS |
| TGCACGTTTACCTTGTGTTG+TGG | 0.572473 | 8_1:+15439135 | Msa1181130:CDS |
| CATTGACTATATTAAACTAT+GGG | 0.573273 | 8_1:+15439584 | Msa1181130:CDS |
| TCAGCAAAAGTTGCATTCGC+CGG | 0.578477 | 8_1:+15437430 | Msa1181130:CDS |
| CACATCCGGGACAGTTGCTG+TGG | 0.581023 | 8_1:+15439102 | Msa1181130:CDS |
| CCATCATTCTGGGCATGGAA+AGG | 0.583758 | 8_1:+15437473 | Msa1181130:CDS |
| CCACCTGGAATCAATACAGC+AGG | 0.584848 | 8_1:-15438510 | None:intergenic |
| AAGTTGCATTGTGCACATCC+GGG | 0.589386 | 8_1:+15439089 | Msa1181130:CDS |
| AGGCACAGGCCACCTTTGAA+CGG | 0.589968 | 8_1:-15438490 | None:intergenic |
| TTGCTGGGACCGTTCAAAGG+TGG | 0.590229 | 8_1:+15438481 | Msa1181130:CDS |
| GGAATTGAAGACTTGAGAGG+AGG | 0.590436 | 8_1:-15435636 | None:intergenic |
| TCCTGGAAGCAGAGTACAAG+AGG | 0.590969 | 8_1:+15438347 | Msa1181130:CDS |
| TGTTGCACCTAATGAGGATG+TGG | 0.591325 | 8_1:+15438449 | Msa1181130:CDS |
| CAATGCCCGAAAATCGAACT+GGG | 0.593435 | 8_1:-15435934 | None:intergenic |
| AGGACTAAGATGACTAGTGA+AGG | 0.594509 | 8_1:+15436060 | Msa1181130:intron |
| GGAATCACCGGAAACCTCGC+CGG | 0.595060 | 8_1:-15435867 | None:intergenic |
| GGAATCAATACAGCAGGCAC+AGG | 0.597983 | 8_1:-15438504 | None:intergenic |
| GCACGATATGCCACAACACA+AGG | 0.610747 | 8_1:-15439145 | None:intergenic |
| ACTGCTCAATCAATGAATGG+AGG | 0.611797 | 8_1:+15437834 | Msa1181130:CDS |
| TCAACTGTTAATACAACATG+AGG | 0.618454 | 8_1:-15437255 | None:intergenic |
| TCATTCTGGGCATGGAAAGG+AGG | 0.620432 | 8_1:+15437476 | Msa1181130:CDS |
| GCTACATAATGAAAATGTGC+CGG | 0.636883 | 8_1:-15437449 | None:intergenic |
| ACATTGATTCTATACAAATG+TGG | 0.647034 | 8_1:-15436141 | None:intergenic |
| GAGGCACCTCATGTTTCCTG+AGG | 0.652123 | 8_1:-15437880 | None:intergenic |
| CAAGACAGGATGTCCAACAA+AGG | 0.669228 | 8_1:-15437597 | None:intergenic |
| AGGAAGCAAGCTAATAACAG+TGG | 0.693557 | 8_1:-15438328 | None:intergenic |
| AGACTTCCTCAGGAAACATG+AGG | 0.696129 | 8_1:+15437874 | Msa1181130:CDS |
| CCTGCTGTATTGATTCCAGG+TGG | 0.713143 | 8_1:+15438510 | Msa1181130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTAAATATGCATTTTT+TGG | - | chr8_1:15436491-15436510 | None:intergenic | 10.0% |
| !! | TTTAAAAAAGAATCAAAATA+AGG | - | chr8_1:15437153-15437172 | None:intergenic | 10.0% |
| !! | TTCTGTAAATTATTTGAAAA+TGG | + | chr8_1:15435986-15436005 | Msa1181130:intron | 15.0% |
| !!! | CTGTATTTTATGTTTTTTTA+TGG | + | chr8_1:15436917-15436936 | Msa1181130:intron | 15.0% |
| !!! | ATGAATTTATTTTTTCTTTC+TGG | + | chr8_1:15437974-15437993 | Msa1181130:intron | 15.0% |
| !!! | TTATCAACTTTAACTTTAAA+AGG | + | chr8_1:15438303-15438322 | Msa1181130:intron | 15.0% |
| !! | GAAAATAAGAATTTATGCAT+AGG | + | chr8_1:15436375-15436394 | Msa1181130:intron | 20.0% |
| !! | TAAGCTATAATAGAATGTTA+TGG | - | chr8_1:15437106-15437125 | None:intergenic | 20.0% |
| !! | AAGAATCAAAATAAGGTTAA+AGG | - | chr8_1:15437146-15437165 | None:intergenic | 20.0% |
| !! | GATAAAATTTGTAGATTGAA+TGG | + | chr8_1:15437563-15437582 | Msa1181130:CDS | 20.0% |
| !!! | AAAAGAATTTGTTATGCAAA+TGG | - | chr8_1:15438593-15438612 | None:intergenic | 20.0% |
| !!! | CTATTTAAAATAGTACTGTA+TGG | - | chr8_1:15438849-15438868 | None:intergenic | 20.0% |
| !!! | TTTAAATAGAAGCACTTTTT+AGG | + | chr8_1:15438860-15438879 | Msa1181130:intron | 20.0% |
| !!! | CATTGACTATATTAAACTAT+GGG | + | chr8_1:15439584-15439603 | Msa1181130:CDS | 20.0% |
| !! | TATTAATCATCATGAATAAC+AGG | - | chr8_1:15439613-15439632 | None:intergenic | 20.0% |
| !!! | GTTTTTATTTCAAATGTTGA+AGG | + | chr8_1:15439652-15439671 | Msa1181130:three_prime_UTR | 20.0% |
| ! | TCAAAAAGTTACAACATGTT+TGG | + | chr8_1:15435683-15435702 | Msa1181130:exon | 25.0% |
| ! | TGAAAAAGAAGAAGAAGAAA+AGG | - | chr8_1:15435771-15435790 | None:intergenic | 25.0% |
| !!! | ACATTGATTCTATACAAATG+TGG | - | chr8_1:15436144-15436163 | None:intergenic | 25.0% |
| !!! | CATAGGTTGTTTTACAAAAT+TGG | + | chr8_1:15436392-15436411 | Msa1181130:intron | 25.0% |
| !!! | TTGTTTTACATATGCTTTCT+TGG | + | chr8_1:15436627-15436646 | Msa1181130:intron | 25.0% |
| !!! | AATTTTCAGCTATTTTCCAT+AGG | - | chr8_1:15436657-15436676 | None:intergenic | 25.0% |
| ! | TGTCTTAAAATGAACCAAAT+AGG | + | chr8_1:15436721-15436740 | Msa1181130:intron | 25.0% |
| ! | ATTAAGCTGTTTATCCAAAT+AGG | + | chr8_1:15436995-15437014 | Msa1181130:intron | 25.0% |
| ! | TTAAGCTGTTTATCCAAATA+GGG | + | chr8_1:15436996-15437015 | Msa1181130:intron | 25.0% |
| ! | AGTAGTTATCAAGTACTATA+GGG | - | chr8_1:15437022-15437041 | None:intergenic | 25.0% |
| ! | TAGTAGTTATCAAGTACTAT+AGG | - | chr8_1:15437023-15437042 | None:intergenic | 25.0% |
| ! | TTCTATTATAGCTTAGTGTT+TGG | + | chr8_1:15437111-15437130 | Msa1181130:intron | 25.0% |
| ! | TCTATTATAGCTTAGTGTTT+GGG | + | chr8_1:15437112-15437131 | Msa1181130:intron | 25.0% |
| !!! | TTTTTTAAAGCTTGTGTTGT+GGG | + | chr8_1:15437164-15437183 | Msa1181130:intron | 25.0% |
| !!! | TAACACATGTTTTGATTTTC+AGG | + | chr8_1:15437191-15437210 | Msa1181130:intron | 25.0% |
| !! | TGTATTAACAGTTGATTCTA+AGG | + | chr8_1:15437263-15437282 | Msa1181130:CDS | 25.0% |
| !! | GTATTAACAGTTGATTCTAA+GGG | + | chr8_1:15437264-15437283 | Msa1181130:CDS | 25.0% |
| !! | CTACAAATTTTATCCTCATT+TGG | - | chr8_1:15437557-15437576 | None:intergenic | 25.0% |
| ! | AAAAATGCTAACTAAGAATG+AGG | - | chr8_1:15437729-15437748 | None:intergenic | 25.0% |
| !!! | AGTTTTGAAATGTTAAGCAT+GGG | - | chr8_1:15438024-15438043 | None:intergenic | 25.0% |
| !!! | TAGTTTTGAAATGTTAAGCA+TGG | - | chr8_1:15438025-15438044 | None:intergenic | 25.0% |
| ! | GAATTGAATTGTCACAAAAA+AGG | - | chr8_1:15438071-15438090 | None:intergenic | 25.0% |
| !! | TAAACTTCAGGTTCAAAATT+TGG | - | chr8_1:15438190-15438209 | None:intergenic | 25.0% |
| ! | ATATGTAAGAATTTATACGC+TGG | - | chr8_1:15439009-15439028 | None:intergenic | 25.0% |
| ! | TTTGTACTTGATAAACCATT+CGG | - | chr8_1:15439182-15439201 | None:intergenic | 25.0% |
| ! | AAGTGATATGTATTGTATCT+TGG | - | chr8_1:15439206-15439225 | None:intergenic | 25.0% |
| !!! | GCATTGACTATATTAAACTA+TGG | + | chr8_1:15439583-15439602 | Msa1181130:CDS | 25.0% |
| TGGTGAATTCAATTTCCATT+TGG | - | chr8_1:15435735-15435754 | None:intergenic | 30.0% | |
| !! | GAAAAGGTTATAAGAGTGTT+TGG | - | chr8_1:15435755-15435774 | None:intergenic | 30.0% |
| TACAGAAGAGCAATAAAAGA+AGG | - | chr8_1:15435973-15435992 | None:intergenic | 30.0% | |
| !! | GAGAGTGTTTAATTTGTTTC+AGG | + | chr8_1:15436040-15436059 | Msa1181130:intron | 30.0% |
| ATCACTGAGATATCTTCAAT+AGG | - | chr8_1:15436102-15436121 | None:intergenic | 30.0% | |
| TATTGAAGATATCTCAGTGA+TGG | + | chr8_1:15436101-15436120 | Msa1181130:CDS | 30.0% | |
| ATTGAAGATATCTCAGTGAT+GGG | + | chr8_1:15436102-15436121 | Msa1181130:CDS | 30.0% | |
| TACATTGTTAGTGTTCTGTT+TGG | + | chr8_1:15436182-15436201 | Msa1181130:intron | 30.0% | |
| ACATTGTTAGTGTTCTGTTT+GGG | + | chr8_1:15436183-15436202 | Msa1181130:intron | 30.0% | |
| TTCAATGTAATCACATGTGT+CGG | + | chr8_1:15436287-15436306 | Msa1181130:intron | 30.0% | |
| ! | TTCTAATTGAAAGTGTGACT+CGG | - | chr8_1:15436339-15436358 | None:intergenic | 30.0% |
| ! | ACACTTTCAATTAGAAGTGT+TGG | + | chr8_1:15436343-15436362 | Msa1181130:intron | 30.0% |
| AAATTGGATTCCATGTACTT+AGG | + | chr8_1:15436408-15436427 | Msa1181130:intron | 30.0% | |
| CTAAAAACAGCTTAAGAACA+TGG | - | chr8_1:15436846-15436865 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTCATAAGCTATCC+TGG | - | chr8_1:15436887-15436906 | None:intergenic | 30.0% |
| CTATTATAGCTTAGTGTTTG+GGG | + | chr8_1:15437113-15437132 | Msa1181130:intron | 30.0% | |
| !!! | CTTTTTTAAAGCTTGTGTTG+TGG | + | chr8_1:15437163-15437182 | Msa1181130:intron | 30.0% |
| TCAACTGTTAATACAACATG+AGG | - | chr8_1:15437258-15437277 | None:intergenic | 30.0% | |
| !! | ATTCTAAGGGCTTTTCTTTT+CGG | + | chr8_1:15437277-15437296 | Msa1181130:CDS | 30.0% |
| !! | GAGGTATTGATGTATACAAA+TGG | + | chr8_1:15437380-15437399 | Msa1181130:intron | 30.0% |
| ! | GTATTGATGTATACAAATGG+TGG | + | chr8_1:15437383-15437402 | Msa1181130:intron | 30.0% |
| AGATGTTATGGAGTTGAATT+TGG | + | chr8_1:15437622-15437641 | Msa1181130:CDS | 30.0% | |
| !! | ACTTTATGGTTGAGTTTTGT+CGG | + | chr8_1:15437775-15437794 | Msa1181130:intron | 30.0% |
| !!! | TTTTCCAATTTAGAAGTACC+TGG | - | chr8_1:15437905-15437924 | None:intergenic | 30.0% |
| AGCTCACATACTTATCTTTA+AGG | + | chr8_1:15437944-15437963 | Msa1181130:intron | 30.0% | |
| !! | GGCTTTTACATAGTTACTTT+TGG | - | chr8_1:15438003-15438022 | None:intergenic | 30.0% |
| ACCTGAAGTTTATTGTAGTT+TGG | + | chr8_1:15438198-15438217 | Msa1181130:intron | 30.0% | |
| TCCAAACTACAATAAACTTC+AGG | - | chr8_1:15438202-15438221 | None:intergenic | 30.0% | |
| TATGCAAATGGAAGTCTAAT+GGG | - | chr8_1:15438581-15438600 | None:intergenic | 30.0% | |
| TTATGCAAATGGAAGTCTAA+TGG | - | chr8_1:15438582-15438601 | None:intergenic | 30.0% | |
| AAGTTGAACACCAAATACAT+AGG | - | chr8_1:15438808-15438827 | None:intergenic | 30.0% | |
| !!! | ATAGAAGCACTTTTTAGGTT+AGG | + | chr8_1:15438865-15438884 | Msa1181130:intron | 30.0% |
| GCTGGTATAATACACAATAA+TGG | - | chr8_1:15438991-15439010 | None:intergenic | 30.0% | |
| !! | TGTGTTGACTCAAATTAACT+AGG | - | chr8_1:15439056-15439075 | None:intergenic | 30.0% |
| AAACCATTCGGTCAAAATAT+GGG | - | chr8_1:15439170-15439189 | None:intergenic | 30.0% | |
| TAAACCATTCGGTCAAAATA+TGG | - | chr8_1:15439171-15439190 | None:intergenic | 30.0% | |
| ! | ATCACTTCCCAATATTCTTT+TGG | + | chr8_1:15439219-15439238 | Msa1181130:CDS | 30.0% |
| GCTGAATCCAAAAGAATATT+GGG | - | chr8_1:15439229-15439248 | None:intergenic | 30.0% | |
| AGCTTAGAATATATTAGTCG+CGG | + | chr8_1:15439360-15439379 | Msa1181130:intron | 30.0% | |
| TTGTGGATAATTCTTTCTGA+AGG | - | chr8_1:15439505-15439524 | None:intergenic | 30.0% | |
| AAATAAAAACTCAATGCCAG+AGG | - | chr8_1:15439642-15439661 | None:intergenic | 30.0% | |
| TTTCAAATGTTGAAGGTTTG+AGG | + | chr8_1:15439659-15439678 | Msa1181130:three_prime_UTR | 30.0% | |
| ! | TTGAACACTGCAACTTTTGA+AGG | - | chr8_1:15435660-15435679 | None:intergenic | 35.0% |
| TGCAAAACCTTTCTCATTGT+TGG | + | chr8_1:15435706-15435725 | Msa1181130:CDS | 35.0% | |
| GCAAAACCTTTCTCATTGTT+GGG | + | chr8_1:15435707-15435726 | Msa1181130:CDS | 35.0% | |
| GTTCAAACCTCCAATAGATA+TGG | + | chr8_1:15435808-15435827 | Msa1181130:CDS | 35.0% | |
| !! | TTTAGGGTTTTCATTGTTGC+CGG | + | chr8_1:15435848-15435867 | Msa1181130:CDS | 35.0% |
| ! | ATATCTCAGTGATGGGAATT+TGG | + | chr8_1:15436109-15436128 | Msa1181130:CDS | 35.0% |
| ! | TATCTCAGTGATGGGAATTT+GGG | + | chr8_1:15436110-15436129 | Msa1181130:CDS | 35.0% |
| TGTTCTGTTTGGGAATTAGT+GGG | + | chr8_1:15436193-15436212 | Msa1181130:intron | 35.0% | |
| TTTGGACCTTTGTTCTTGAT+CGG | - | chr8_1:15436473-15436492 | None:intergenic | 35.0% | |
| TAAGCACTTGTGAAACTGTT+TGG | + | chr8_1:15436797-15436816 | Msa1181130:intron | 35.0% | |
| AAGCACTTGTGAAACTGTTT+GGG | + | chr8_1:15436798-15436817 | Msa1181130:intron | 35.0% | |
| TGTAATTGACCCTACTTAGT+GGG | - | chr8_1:15437069-15437088 | None:intergenic | 35.0% | |
| ATGTAATTGACCCTACTTAG+TGG | - | chr8_1:15437070-15437089 | None:intergenic | 35.0% | |
| ACTAAGTAGGGTCAATTACA+TGG | + | chr8_1:15437069-15437088 | Msa1181130:intron | 35.0% | |
| AATTAATGTACCTGCAGTGA+TGG | + | chr8_1:15437331-15437350 | Msa1181130:intron | 35.0% | |
| !! | GTTGTGGATTTGCTATTTAG+AGG | + | chr8_1:15437361-15437380 | Msa1181130:intron | 35.0% |
| TGACTATATCTAGCTGCAAA+AGG | - | chr8_1:15437413-15437432 | None:intergenic | 35.0% | |
| GCTACATAATGAAAATGTGC+CGG | - | chr8_1:15437452-15437471 | None:intergenic | 35.0% | |
| ATTATGTAGCACCATCATTC+TGG | + | chr8_1:15437462-15437481 | Msa1181130:CDS | 35.0% | |
| TTATGTAGCACCATCATTCT+GGG | + | chr8_1:15437463-15437482 | Msa1181130:CDS | 35.0% | |
| ACTCAACCATAAAGTTCAAC+TGG | - | chr8_1:15437770-15437789 | None:intergenic | 35.0% | |
| AAGATAAGTATGTGAGCTTG+TGG | - | chr8_1:15437942-15437961 | None:intergenic | 35.0% | |
| ! | TGCTTTCTTTCTCTTTTGTG+TGG | + | chr8_1:15438135-15438154 | Msa1181130:intron | 35.0% |
| !!! | CAGGTTCAAAATTTGGCTTT+TGG | - | chr8_1:15438183-15438202 | None:intergenic | 35.0% |
| TGCATAGTGTGTCTAGAAAA+TGG | - | chr8_1:15438244-15438263 | None:intergenic | 35.0% | |
| TCCATTGTATTAGCGAAGAT+GGG | - | chr8_1:15438387-15438406 | None:intergenic | 35.0% | |
| TTCCATTGTATTAGCGAAGA+TGG | - | chr8_1:15438388-15438407 | None:intergenic | 35.0% | |
| ! | AAGTTTTCCACATCCTCATT+AGG | - | chr8_1:15438459-15438478 | None:intergenic | 35.0% |
| ATGTGGAAAACTTCATTGCT+GGG | + | chr8_1:15438466-15438485 | Msa1181130:CDS | 35.0% | |
| !! | CACTAAAAGCATCATATCTC+AGG | - | chr8_1:15438545-15438564 | None:intergenic | 35.0% |
| CTTATGGATCCATTGTAGAA+TGG | + | chr8_1:15438680-15438699 | Msa1181130:intron | 35.0% | |
| !! | CTAGAAGTTGATAAAGCTAG+AGG | - | chr8_1:15438712-15438731 | None:intergenic | 35.0% |
| !! | CTAGCTTTATCAACTTCTAG+TGG | + | chr8_1:15438712-15438731 | Msa1181130:intron | 35.0% |
| TTCCTAGCTTCCTATGTATT+TGG | + | chr8_1:15438795-15438814 | Msa1181130:intron | 35.0% | |
| TAGTACTGTATGGACAGTTA+TGG | - | chr8_1:15438839-15438858 | None:intergenic | 35.0% | |
| !!! | AAGCACTTTTTAGGTTAGGT+AGG | + | chr8_1:15438869-15438888 | Msa1181130:intron | 35.0% |
| AAGCATCAGACAGAAAAACA+AGG | - | chr8_1:15438904-15438923 | None:intergenic | 35.0% | |
| GGCTGAATCCAAAAGAATAT+TGG | - | chr8_1:15439230-15439249 | None:intergenic | 35.0% | |
| !! | AAAGAGTGCTTCAGGAATAA+TGG | - | chr8_1:15439251-15439270 | None:intergenic | 35.0% |
| ACTCTTTCAATCATGCAAAC+CGG | + | chr8_1:15439264-15439283 | Msa1181130:CDS | 35.0% | |
| TCAGACTTACTTGAGCAATA+AGG | - | chr8_1:15439299-15439318 | None:intergenic | 35.0% | |
| GCTTAGAATATATTAGTCGC+GGG | + | chr8_1:15439361-15439380 | Msa1181130:intron | 35.0% | |
| ! | TCATCAAATTTTGCTCTGCA+AGG | - | chr8_1:15439528-15439547 | None:intergenic | 35.0% |
| ATGATTAATACAGAAGCCTC+TGG | + | chr8_1:15439623-15439642 | Msa1181130:exon | 35.0% | |
| GAAGGAATTGAAGACTTGAG+AGG | - | chr8_1:15435642-15435661 | None:intergenic | 40.0% | |
| TTGGTTCCCAACAATGAGAA+AGG | - | chr8_1:15435716-15435735 | None:intergenic | 40.0% | |
| TCTCATTGTTGGGAACCAAA+TGG | + | chr8_1:15435717-15435736 | Msa1181130:CDS | 40.0% | |
| TCTCTTGCAGCCATATCTAT+TGG | - | chr8_1:15435821-15435840 | None:intergenic | 40.0% | |
| ATAGATATGGCTGCAAGAGA+TGG | + | chr8_1:15435821-15435840 | Msa1181130:CDS | 40.0% | |
| TGCAAGAGATGGCGAATTTA+GGG | + | chr8_1:15435832-15435851 | Msa1181130:CDS | 40.0% | |
| ! | TCCTTTCCCAGTTCGATTTT+CGG | + | chr8_1:15435928-15435947 | Msa1181130:CDS | 40.0% |
| AGGACTAAGATGACTAGTGA+AGG | + | chr8_1:15436060-15436079 | Msa1181130:intron | 40.0% | |
| GTGTTCTGTTTGGGAATTAG+TGG | + | chr8_1:15436192-15436211 | Msa1181130:intron | 40.0% | |
| GTTCTGTTTGGGAATTAGTG+GGG | + | chr8_1:15436194-15436213 | Msa1181130:intron | 40.0% | |
| CAAGCACGTATTCACACATT+CGG | + | chr8_1:15436432-15436451 | Msa1181130:intron | 40.0% | |
| AAGCACGTATTCACACATTC+GGG | + | chr8_1:15436433-15436452 | Msa1181130:intron | 40.0% | |
| AAGATACCCGAGCTTGAATT+TGG | + | chr8_1:15436525-15436544 | Msa1181130:intron | 40.0% | |
| ACACTGTCCAAATTCAAGCT+CGG | - | chr8_1:15436535-15436554 | None:intergenic | 40.0% | |
| GAATTTGGACAGTGTCTTGA+TGG | + | chr8_1:15436540-15436559 | Msa1181130:intron | 40.0% | |
| ACAATCACGCATTCGAACAT+TGG | - | chr8_1:15436574-15436593 | None:intergenic | 40.0% | |
| GGTGTTTGGAAAAGCCTATT+TGG | - | chr8_1:15436738-15436757 | None:intergenic | 40.0% | |
| ATAGGCTCAAATAAGCCAAC+AGG | - | chr8_1:15436768-15436787 | None:intergenic | 40.0% | |
| GCTTATTTGAGCCTATCTAC+TGG | + | chr8_1:15436772-15436791 | Msa1181130:intron | 40.0% | |
| AAGTGCTTATGCCAGTAGAT+AGG | - | chr8_1:15436786-15436805 | None:intergenic | 40.0% | |
| CTTATTTCGATAAGCTCTCC+AGG | + | chr8_1:15436866-15436885 | Msa1181130:intron | 40.0% | |
| AAGTACTATAGGGCCCTATT+TGG | - | chr8_1:15437012-15437031 | None:intergenic | 40.0% | |
| TACTTAGTGGGATAAGGTCT+TGG | - | chr8_1:15437057-15437076 | None:intergenic | 40.0% | |
| AAGACCTTATCCCACTAAGT+AGG | + | chr8_1:15437056-15437075 | Msa1181130:intron | 40.0% | |
| AGACCTTATCCCACTAAGTA+GGG | + | chr8_1:15437057-15437076 | Msa1181130:intron | 40.0% | |
| !!! | CGGTTTTTGAAACAGCTAAG+AGG | + | chr8_1:15437297-15437316 | Msa1181130:CDS | 40.0% |
| ! | AACAGATTTTCCATCACTGC+AGG | - | chr8_1:15437344-15437363 | None:intergenic | 40.0% |
| ! | CAGTGATGGAAAATCTGTTG+TGG | + | chr8_1:15437345-15437364 | Msa1181130:intron | 40.0% |
| GTTCTGCATACTTCCAAATG+AGG | + | chr8_1:15437541-15437560 | Msa1181130:CDS | 40.0% | |
| GGATTATCTGCAACCTTTGT+TGG | + | chr8_1:15437584-15437603 | Msa1181130:CDS | 40.0% | |
| TCCTGTCTTGGAAGATGTTA+TGG | + | chr8_1:15437610-15437629 | Msa1181130:CDS | 40.0% | |
| TCCATAACATCTTCCAAGAC+AGG | - | chr8_1:15437614-15437633 | None:intergenic | 40.0% | |
| CCATAAAGTTCAACTGGACA+AGG | - | chr8_1:15437764-15437783 | None:intergenic | 40.0% | |
| CCTTGTCCAGTTGAACTTTA+TGG | + | chr8_1:15437761-15437780 | Msa1181130:intron | 40.0% | |
| ! | CCATTCATTGATTGAGCAGT+TGG | - | chr8_1:15437834-15437853 | None:intergenic | 40.0% |
| CCAACTGCTCAATCAATGAA+TGG | + | chr8_1:15437831-15437850 | Msa1181130:CDS | 40.0% | |
| ACTGCTCAATCAATGAATGG+AGG | + | chr8_1:15437834-15437853 | Msa1181130:CDS | 40.0% | |
| CTGCTCAATCAATGAATGGA+GGG | + | chr8_1:15437835-15437854 | Msa1181130:CDS | 40.0% | |
| !! | TCCAATTTAGAAGTACCTGG+AGG | - | chr8_1:15437902-15437921 | None:intergenic | 40.0% |
| AGGAAGCAAGCTAATAACAG+TGG | - | chr8_1:15438331-15438350 | None:intergenic | 40.0% | |
| !! | ACTGTTATTAGCTTGCTTCC+TGG | + | chr8_1:15438330-15438349 | Msa1181130:CDS | 40.0% |
| TCCCATCTTCGCTAATACAA+TGG | + | chr8_1:15438383-15438402 | Msa1181130:CDS | 40.0% | |
| TGAAAGACAGTCGTCAATTG+TGG | - | chr8_1:15438429-15438448 | None:intergenic | 40.0% | |
| CTTTCATGTTGCACCTAATG+AGG | + | chr8_1:15438443-15438462 | Msa1181130:CDS | 40.0% | |
| GATGTGGAAAACTTCATTGC+TGG | + | chr8_1:15438465-15438484 | Msa1181130:CDS | 40.0% | |
| GGAAGTCTAATGGGAAAATG+AGG | - | chr8_1:15438572-15438591 | None:intergenic | 40.0% | |
| GATCCATAAGAACAAATGCC+AGG | - | chr8_1:15438670-15438689 | None:intergenic | 40.0% | |
| AGGCTGTAACCATTCTACAA+TGG | - | chr8_1:15438692-15438711 | None:intergenic | 40.0% | |
| CACCAAATACATAGGAAGCT+AGG | - | chr8_1:15438800-15438819 | None:intergenic | 40.0% | |
| CATCAGACAGAAAAACAAGG+TGG | - | chr8_1:15438901-15438920 | None:intergenic | 40.0% | |
| AATTTGAGTCAACACATCGC+AGG | + | chr8_1:15439060-15439079 | Msa1181130:intron | 40.0% | |
| AAAGTTGCATTGTGCACATC+CGG | + | chr8_1:15439088-15439107 | Msa1181130:CDS | 40.0% | |
| !! | CATGATTGAAAGAGTGCTTC+AGG | - | chr8_1:15439259-15439278 | None:intergenic | 40.0% |
| ! | AATTTTGCTCTGCAAGGTTG+TGG | - | chr8_1:15439522-15439541 | None:intergenic | 40.0% |
| GGAATTGAAGACTTGAGAGG+AGG | - | chr8_1:15435639-15435658 | None:intergenic | 45.0% | |
| CTTGCAGCCATATCTATTGG+AGG | - | chr8_1:15435818-15435837 | None:intergenic | 45.0% | |
| CTGCAAGAGATGGCGAATTT+AGG | + | chr8_1:15435831-15435850 | Msa1181130:CDS | 45.0% | |
| ACGAGAAGCAATGGAATCAC+CGG | - | chr8_1:15435882-15435901 | None:intergenic | 45.0% | |
| TTCCATTGCTTCTCGTCTCA+TGG | + | chr8_1:15435886-15435905 | Msa1181130:CDS | 45.0% | |
| ! | CCTTTCCCAGTTCGATTTTC+GGG | + | chr8_1:15435929-15435948 | Msa1181130:CDS | 45.0% |
| CAATGCCCGAAAATCGAACT+GGG | - | chr8_1:15435937-15435956 | None:intergenic | 45.0% | |
| !!! | TTCGATTTTCGGGCATTGGA+GGG | + | chr8_1:15435939-15435958 | Msa1181130:CDS | 45.0% |
| ! | GTAATCACATGTGTCGGTGT+CGG | + | chr8_1:15436293-15436312 | Msa1181130:intron | 45.0% |
| ACGTGCTTGTCCTAAGTACA+TGG | - | chr8_1:15436421-15436440 | None:intergenic | 45.0% | |
| AGCACGTATTCACACATTCG+GGG | + | chr8_1:15436434-15436453 | Msa1181130:intron | 45.0% | |
| TATTCACACATTCGGGGCAT+TGG | + | chr8_1:15436440-15436459 | Msa1181130:intron | 45.0% | |
| GACCTTTGTTCTTGATCGGA+CGG | - | chr8_1:15436469-15436488 | None:intergenic | 45.0% | |
| CACTGTCCAAATTCAAGCTC+GGG | - | chr8_1:15436534-15436553 | None:intergenic | 45.0% | |
| TGGACAGTGTCTTGATGGAA+TGG | + | chr8_1:15436545-15436564 | Msa1181130:intron | 45.0% | |
| TGTGTACTTCGCTTGACTAC+AGG | + | chr8_1:15436591-15436610 | Msa1181130:intron | 45.0% | |
| GTGTACTTCGCTTGACTACA+GGG | + | chr8_1:15436592-15436611 | Msa1181130:intron | 45.0% | |
| ATGCTTTCTTGGAGAGCCTA+TGG | + | chr8_1:15436638-15436657 | Msa1181130:intron | 45.0% | |
| ! | AGGCTTTTCCAAACACCTCT+AGG | + | chr8_1:15436741-15436760 | Msa1181130:intron | 45.0% |
| ! | GGCTTTTCCAAACACCTCTA+GGG | + | chr8_1:15436742-15436761 | Msa1181130:intron | 45.0% |
| TGACCCTACTTAGTGGGATA+AGG | - | chr8_1:15437063-15437082 | None:intergenic | 45.0% | |
| TCAGCAAAAGTTGCATTCGC+CGG | + | chr8_1:15437430-15437449 | Msa1181130:CDS | 45.0% | |
| CATGGAAAGGAGGTGAAGAA+AGG | + | chr8_1:15437486-15437505 | Msa1181130:CDS | 45.0% | |
| TGAAGAAAGGCTTAGAGGAC+TGG | + | chr8_1:15437499-15437518 | Msa1181130:CDS | 45.0% | |
| ! | TAGAGGACTGGCAGAATTTG+TGG | + | chr8_1:15437511-15437530 | Msa1181130:CDS | 45.0% |
| CAAGACAGGATGTCCAACAA+AGG | - | chr8_1:15437600-15437619 | None:intergenic | 45.0% | |
| CTTTGTTGGACATCCTGTCT+TGG | + | chr8_1:15437598-15437617 | Msa1181130:CDS | 45.0% | |
| ATCAATGAATGGAGGGCTGA+AGG | + | chr8_1:15437842-15437861 | Msa1181130:CDS | 45.0% | |
| GAAATGGTGAAGACTTCCTC+AGG | + | chr8_1:15437864-15437883 | Msa1181130:CDS | 45.0% | |
| AGACTTCCTCAGGAAACATG+AGG | + | chr8_1:15437874-15437893 | Msa1181130:CDS | 45.0% | |
| GCCTCCAGGTACTTCTAAAT+TGG | + | chr8_1:15437898-15437917 | Msa1181130:intron | 45.0% | |
| TGTTGCACCTAATGAGGATG+TGG | + | chr8_1:15438449-15438468 | Msa1181130:CDS | 45.0% | |
| !! | AACACCTTTGTTTCTGCTCC+TGG | + | chr8_1:15438649-15438668 | Msa1181130:intron | 45.0% |
| AATGCCAGGAGCAGAAACAA+AGG | - | chr8_1:15438656-15438675 | None:intergenic | 45.0% | |
| GCTCCTGGCATTTGTTCTTA+TGG | + | chr8_1:15438664-15438683 | Msa1181130:intron | 45.0% | |
| AAGTTGCATTGTGCACATCC+GGG | + | chr8_1:15439089-15439108 | Msa1181130:CDS | 45.0% | |
| TGCACGTTTACCTTGTGTTG+TGG | + | chr8_1:15439135-15439154 | Msa1181130:CDS | 45.0% | |
| !!! | GTGCCCATATTTTGACCGAA+TGG | + | chr8_1:15439164-15439183 | Msa1181130:CDS | 45.0% |
| AGCAATAAGGCTATGTCTGC+CGG | - | chr8_1:15439286-15439305 | None:intergenic | 45.0% | |
| ACAGCACTCGGACTATAATC+AGG | - | chr8_1:15439559-15439578 | None:intergenic | 45.0% | |
| AGCCATGAGACGAGAAGCAA+TGG | - | chr8_1:15435891-15435910 | None:intergenic | 50.0% | |
| CCCGAAAATCGAACTGGGAA+AGG | - | chr8_1:15435932-15435951 | None:intergenic | 50.0% | |
| CCAATGCCCGAAAATCGAAC+TGG | - | chr8_1:15435938-15435957 | None:intergenic | 50.0% | |
| !! | CCAGTTCGATTTTCGGGCAT+TGG | + | chr8_1:15435935-15435954 | Msa1181130:CDS | 50.0% |
| !!! | GTTCGATTTTCGGGCATTGG+AGG | + | chr8_1:15435938-15435957 | Msa1181130:CDS | 50.0% |
| AGCCGTCCGATCAAGAACAA+AGG | + | chr8_1:15436464-15436483 | Msa1181130:intron | 50.0% | |
| AATAAGCCAACAGGCCCTAG+AGG | - | chr8_1:15436759-15436778 | None:intergenic | 50.0% | |
| TAGCACCATCATTCTGGGCA+TGG | + | chr8_1:15437468-15437487 | Msa1181130:CDS | 50.0% | |
| CCTTTCCATGCCCAGAATGA+TGG | - | chr8_1:15437476-15437495 | None:intergenic | 50.0% | |
| CCATCATTCTGGGCATGGAA+AGG | + | chr8_1:15437473-15437492 | Msa1181130:CDS | 50.0% | |
| TCATTCTGGGCATGGAAAGG+AGG | + | chr8_1:15437476-15437495 | Msa1181130:CDS | 50.0% | |
| GGAGGTGAAGAAAGGCTTAG+AGG | + | chr8_1:15437494-15437513 | Msa1181130:CDS | 50.0% | |
| GAATGGAGGGCTGAAGGAAA+TGG | + | chr8_1:15437848-15437867 | Msa1181130:CDS | 50.0% | |
| TCCTGGAAGCAGAGTACAAG+AGG | + | chr8_1:15438347-15438366 | Msa1181130:CDS | 50.0% | |
| ACCTCTTGTACTCTGCTTCC+AGG | - | chr8_1:15438351-15438370 | None:intergenic | 50.0% | |
| GCAGAGTACAAGAGGTCAGT+CGG | + | chr8_1:15438355-15438374 | Msa1181130:CDS | 50.0% | |
| TCATTGCTGGGACCGTTCAA+AGG | + | chr8_1:15438478-15438497 | Msa1181130:CDS | 50.0% | |
| GGAATCAATACAGCAGGCAC+AGG | - | chr8_1:15438507-15438526 | None:intergenic | 50.0% | |
| !! | GTGCCTGCTGTATTGATTCC+AGG | + | chr8_1:15438507-15438526 | Msa1181130:CDS | 50.0% |
| CCACCTGGAATCAATACAGC+AGG | - | chr8_1:15438513-15438532 | None:intergenic | 50.0% | |
| !! | CCTGCTGTATTGATTCCAGG+TGG | + | chr8_1:15438510-15438529 | Msa1181130:CDS | 50.0% |
| GCACGATATGCCACAACACA+AGG | - | chr8_1:15439148-15439167 | None:intergenic | 50.0% | |
| GTCAATGCTGCAACAGCACT+CGG | - | chr8_1:15439571-15439590 | None:intergenic | 50.0% | |
| ! | GGTTTTCATTGTTGCCGGCG+AGG | + | chr8_1:15435853-15435872 | Msa1181130:CDS | 55.0% |
| ATTGTTGCCGGCGAGGTTTC+CGG | + | chr8_1:15435860-15435879 | Msa1181130:CDS | 55.0% | |
| !! | CAACAGGCCCTAGAGGTGTT+TGG | - | chr8_1:15436752-15436771 | None:intergenic | 55.0% |
| !! | CAAACACCTCTAGGGCCTGT+TGG | + | chr8_1:15436750-15436769 | Msa1181130:intron | 55.0% |
| ! | GAGGCACCTCATGTTTCCTG+AGG | - | chr8_1:15437883-15437902 | None:intergenic | 55.0% |
| ! | AGGAAACATGAGGTGCCTCC+AGG | + | chr8_1:15437884-15437903 | Msa1181130:CDS | 55.0% |
| TTGCTGGGACCGTTCAAAGG+TGG | + | chr8_1:15438481-15438500 | Msa1181130:CDS | 55.0% | |
| AGGCACAGGCCACCTTTGAA+CGG | - | chr8_1:15438493-15438512 | None:intergenic | 55.0% | |
| ! | CTCAGGTGTGTTGTTCCACC+TGG | - | chr8_1:15438528-15438547 | None:intergenic | 55.0% |
| GGAATCACCGGAAACCTCGC+CGG | - | chr8_1:15435870-15435889 | None:intergenic | 60.0% | |
| CACATCCGGGACAGTTGCTG+TGG | + | chr8_1:15439102-15439121 | Msa1181130:CDS | 60.0% | |
| CAGCTCCACAGCAACTGTCC+CGG | - | chr8_1:15439110-15439129 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 15435629 | 15439682 | 15435629 | ID=Msa1181130;Name=Msa1181130 |
| chr8_1 | mRNA | 15435629 | 15439682 | 15435629 | ID=Msa1181130-mRNA-1;Parent=Msa1181130;Name=Msa1181130-mRNA-1;_AED=0.06;_eAED=0.06;_QI=69|1|0.87|1|1|1|8|52|479 |
| chr8_1 | exon | 15435629 | 15435960 | 15435629 | ID=Msa1181130-mRNA-1:exon:5776;Parent=Msa1181130-mRNA-1 |
| chr8_1 | exon | 15436062 | 15436161 | 15436062 | ID=Msa1181130-mRNA-1:exon:5777;Parent=Msa1181130-mRNA-1 |
| chr8_1 | exon | 15437213 | 15437318 | 15437213 | ID=Msa1181130-mRNA-1:exon:5778;Parent=Msa1181130-mRNA-1 |
| chr8_1 | exon | 15437420 | 15437643 | 15437420 | ID=Msa1181130-mRNA-1:exon:5779;Parent=Msa1181130-mRNA-1 |
| chr8_1 | exon | 15437827 | 15437905 | 15437827 | ID=Msa1181130-mRNA-1:exon:5780;Parent=Msa1181130-mRNA-1 |
| chr8_1 | exon | 15438325 | 15438563 | 15438325 | ID=Msa1181130-mRNA-1:exon:5781;Parent=Msa1181130-mRNA-1 |
| chr8_1 | exon | 15439082 | 15439308 | 15439082 | ID=Msa1181130-mRNA-1:exon:5782;Parent=Msa1181130-mRNA-1 |
| chr8_1 | exon | 15439429 | 15439682 | 15439429 | ID=Msa1181130-mRNA-1:exon:5783;Parent=Msa1181130-mRNA-1 |
| chr8_1 | five_prime_UTR | 15435629 | 15435697 | 15435629 | ID=Msa1181130-mRNA-1:five_prime_utr;Parent=Msa1181130-mRNA-1 |
| chr8_1 | CDS | 15435698 | 15435960 | 15435698 | ID=Msa1181130-mRNA-1:cds;Parent=Msa1181130-mRNA-1 |
| chr8_1 | CDS | 15436062 | 15436161 | 15436062 | ID=Msa1181130-mRNA-1:cds;Parent=Msa1181130-mRNA-1 |
| chr8_1 | CDS | 15437213 | 15437318 | 15437213 | ID=Msa1181130-mRNA-1:cds;Parent=Msa1181130-mRNA-1 |
| chr8_1 | CDS | 15437420 | 15437643 | 15437420 | ID=Msa1181130-mRNA-1:cds;Parent=Msa1181130-mRNA-1 |
| chr8_1 | CDS | 15437827 | 15437905 | 15437827 | ID=Msa1181130-mRNA-1:cds;Parent=Msa1181130-mRNA-1 |
| chr8_1 | CDS | 15438325 | 15438563 | 15438325 | ID=Msa1181130-mRNA-1:cds;Parent=Msa1181130-mRNA-1 |
| chr8_1 | CDS | 15439082 | 15439308 | 15439082 | ID=Msa1181130-mRNA-1:cds;Parent=Msa1181130-mRNA-1 |
| chr8_1 | CDS | 15439429 | 15439630 | 15439429 | ID=Msa1181130-mRNA-1:cds;Parent=Msa1181130-mRNA-1 |
| chr8_1 | three_prime_UTR | 15439631 | 15439682 | 15439631 | ID=Msa1181130-mRNA-1:three_prime_utr;Parent=Msa1181130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
