Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191210 | RHN73282.1 | 93.913 | 230 | 14 | 0 | 1 | 230 | 348 | 577 | 1.14e-152 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191210 | sp|Q9SWG3|FAR1_ARATH | 38.288 | 222 | 129 | 3 | 1 | 222 | 408 | 621 | 4.94e-42 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023610 | Msa1191210 | 0.809047 | 2.294892e-50 | -8.615850e-47 |
| Msa0675510 | Msa1191210 | 0.814915 | 1.207794e-51 | -8.615850e-47 |
| Msa0153200 | Msa1191210 | 0.806771 | 6.998112e-50 | -8.615850e-47 |
| Msa1191210 | Msa1244460 | 0.913749 | 4.285516e-84 | -8.615850e-47 |
| Msa1191210 | Msa1463140 | 0.806267 | 8.938543e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191210 | MtrunA17_Chr2g0296781 | 93.913 | 230 | 14 | 0 | 1 | 230 | 348 | 577 | 1.05e-156 | 451 |
| Msa1191210 | MtrunA17_Chr6g0477261 | 91.739 | 230 | 19 | 0 | 1 | 230 | 237 | 466 | 1.65e-154 | 444 |
| Msa1191210 | MtrunA17_Chr1g0196541 | 74.009 | 227 | 59 | 0 | 1 | 227 | 348 | 574 | 1.17e-109 | 331 |
| Msa1191210 | MtrunA17_Chr5g0441581 | 49.302 | 215 | 108 | 1 | 2 | 216 | 377 | 590 | 8.90e-66 | 215 |
| Msa1191210 | MtrunA17_Chr6g0476441 | 89.024 | 82 | 9 | 0 | 149 | 230 | 1 | 82 | 5.95e-47 | 157 |
| Msa1191210 | MtrunA17_Chr1g0207551 | 41.706 | 211 | 116 | 3 | 1 | 211 | 388 | 591 | 6.80e-43 | 154 |
| Msa1191210 | MtrunA17_Chr2g0291581 | 37.441 | 211 | 129 | 3 | 1 | 209 | 412 | 621 | 1.32e-41 | 150 |
| Msa1191210 | MtrunA17_Chr5g0448761 | 38.318 | 214 | 126 | 3 | 1 | 214 | 423 | 630 | 3.16e-41 | 149 |
| Msa1191210 | MtrunA17_Chr3g0080351 | 37.441 | 211 | 125 | 2 | 1 | 211 | 422 | 625 | 1.08e-40 | 147 |
| Msa1191210 | MtrunA17_Chr5g0440451 | 37.500 | 232 | 133 | 5 | 1 | 230 | 404 | 625 | 5.40e-40 | 146 |
| Msa1191210 | MtrunA17_Chr3g0118611 | 37.799 | 209 | 122 | 3 | 1 | 209 | 301 | 501 | 1.41e-36 | 136 |
| Msa1191210 | MtrunA17_Chr1g0202341 | 37.441 | 211 | 122 | 5 | 1 | 209 | 407 | 609 | 1.97e-35 | 132 |
| Msa1191210 | MtrunA17_Chr2g0329031 | 33.178 | 214 | 135 | 3 | 1 | 214 | 361 | 566 | 5.49e-35 | 131 |
| Msa1191210 | MtrunA17_Chr5g0448511 | 33.014 | 209 | 134 | 3 | 1 | 209 | 195 | 397 | 1.01e-32 | 124 |
| Msa1191210 | MtrunA17_Chr2g0287061 | 33.971 | 209 | 122 | 5 | 5 | 209 | 505 | 701 | 2.78e-24 | 100 |
| Msa1191210 | MtrunA17_Chr2g0276841 | 28.696 | 230 | 139 | 8 | 1 | 223 | 432 | 643 | 3.11e-19 | 85.9 |
| Msa1191210 | MtrunA17_Chr8g0363841 | 28.444 | 225 | 125 | 6 | 1 | 209 | 373 | 577 | 3.73e-19 | 85.9 |
| Msa1191210 | MtrunA17_Chr2g0287651 | 27.570 | 214 | 146 | 5 | 1 | 212 | 429 | 635 | 2.38e-18 | 83.6 |
| Msa1191210 | MtrunA17_Chr2g0291591 | 34.959 | 123 | 80 | 0 | 1 | 123 | 415 | 537 | 2.50e-18 | 83.2 |
| Msa1191210 | MtrunA17_Chr1g0203051 | 28.571 | 203 | 123 | 4 | 1 | 194 | 431 | 620 | 5.15e-18 | 82.4 |
| Msa1191210 | MtrunA17_Chr1g0198761 | 29.487 | 234 | 149 | 6 | 1 | 229 | 414 | 636 | 6.73e-18 | 82.0 |
| Msa1191210 | MtrunA17_Chr3g0082121 | 31.068 | 206 | 130 | 6 | 5 | 209 | 396 | 590 | 7.74e-17 | 79.0 |
| Msa1191210 | MtrunA17_Chr2g0308841 | 28.302 | 212 | 135 | 5 | 1 | 206 | 24 | 224 | 2.80e-15 | 72.8 |
| Msa1191210 | MtrunA17_Chr2g0324011 | 24.299 | 214 | 146 | 4 | 1 | 209 | 366 | 568 | 3.27e-15 | 74.3 |
| Msa1191210 | MtrunA17_Chr6g0458391 | 26.540 | 211 | 144 | 4 | 1 | 209 | 564 | 765 | 1.55e-14 | 72.4 |
| Msa1191210 | MtrunA17_Chr1g0172041 | 34.375 | 96 | 62 | 1 | 121 | 216 | 1 | 95 | 1.13e-13 | 65.5 |
| Msa1191210 | MtrunA17_Chr2g0290391 | 26.432 | 227 | 144 | 7 | 1 | 225 | 421 | 626 | 1.74e-13 | 69.3 |
| Msa1191210 | MtrunA17_Chr1g0203721 | 25.359 | 209 | 149 | 3 | 1 | 209 | 422 | 623 | 1.93e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191210 | AT4G15090.1 | 38.288 | 222 | 129 | 3 | 1 | 222 | 408 | 621 | 5.02e-43 | 155 |
| Msa1191210 | AT4G15090.5 | 38.288 | 222 | 129 | 3 | 1 | 222 | 408 | 621 | 5.02e-43 | 155 |
| Msa1191210 | AT4G15090.3 | 38.288 | 222 | 129 | 3 | 1 | 222 | 408 | 621 | 5.02e-43 | 155 |
| Msa1191210 | AT4G15090.2 | 38.288 | 222 | 129 | 3 | 1 | 222 | 408 | 621 | 5.02e-43 | 155 |
| Msa1191210 | AT4G15090.4 | 38.288 | 222 | 129 | 3 | 1 | 222 | 408 | 621 | 5.02e-43 | 155 |
| Msa1191210 | AT3G22170.2 | 39.423 | 208 | 119 | 3 | 5 | 212 | 421 | 621 | 9.70e-43 | 154 |
| Msa1191210 | AT3G22170.1 | 39.423 | 208 | 119 | 3 | 5 | 212 | 421 | 621 | 9.70e-43 | 154 |
| Msa1191210 | AT4G38180.1 | 36.364 | 209 | 127 | 4 | 1 | 209 | 432 | 634 | 6.27e-39 | 143 |
| Msa1191210 | AT1G52520.1 | 36.574 | 216 | 125 | 7 | 1 | 209 | 428 | 638 | 6.46e-38 | 140 |
| Msa1191210 | AT4G19990.1 | 35.349 | 215 | 132 | 3 | 1 | 214 | 299 | 507 | 1.37e-36 | 136 |
| Msa1191210 | AT4G19990.3 | 35.349 | 215 | 132 | 3 | 1 | 214 | 356 | 564 | 1.44e-36 | 136 |
| Msa1191210 | AT4G19990.4 | 35.349 | 215 | 132 | 3 | 1 | 214 | 356 | 564 | 1.44e-36 | 136 |
| Msa1191210 | AT4G19990.5 | 35.349 | 215 | 132 | 3 | 1 | 214 | 356 | 564 | 1.63e-36 | 136 |
| Msa1191210 | AT4G19990.7 | 35.349 | 215 | 132 | 3 | 1 | 214 | 370 | 578 | 1.74e-36 | 136 |
| Msa1191210 | AT4G19990.6 | 35.349 | 215 | 132 | 3 | 1 | 214 | 356 | 564 | 1.94e-36 | 136 |
| Msa1191210 | AT4G19990.2 | 35.349 | 215 | 132 | 3 | 1 | 214 | 356 | 564 | 1.94e-36 | 136 |
| Msa1191210 | AT1G76320.2 | 34.259 | 216 | 133 | 4 | 1 | 216 | 345 | 551 | 1.20e-34 | 130 |
| Msa1191210 | AT1G76320.1 | 34.259 | 216 | 133 | 4 | 1 | 216 | 345 | 551 | 1.25e-34 | 130 |
| Msa1191210 | AT1G76320.4 | 34.259 | 216 | 133 | 4 | 1 | 216 | 345 | 551 | 1.25e-34 | 130 |
| Msa1191210 | AT1G76320.3 | 34.259 | 216 | 133 | 4 | 1 | 216 | 345 | 551 | 1.35e-34 | 130 |
| Msa1191210 | AT4G38170.1 | 31.455 | 213 | 140 | 2 | 1 | 213 | 197 | 403 | 1.83e-32 | 124 |
| Msa1191210 | AT2G32250.5 | 33.981 | 206 | 129 | 2 | 1 | 206 | 352 | 550 | 3.79e-30 | 118 |
| Msa1191210 | AT2G32250.8 | 33.981 | 206 | 129 | 2 | 1 | 206 | 311 | 509 | 3.83e-30 | 118 |
| Msa1191210 | AT2G32250.7 | 33.981 | 206 | 129 | 2 | 1 | 206 | 311 | 509 | 4.07e-30 | 117 |
| Msa1191210 | AT2G32250.2 | 33.981 | 206 | 129 | 2 | 1 | 206 | 352 | 550 | 4.22e-30 | 117 |
| Msa1191210 | AT2G32250.4 | 33.981 | 206 | 129 | 2 | 1 | 206 | 352 | 550 | 4.22e-30 | 117 |
| Msa1191210 | AT2G32250.6 | 33.981 | 206 | 129 | 2 | 1 | 206 | 352 | 550 | 4.31e-30 | 117 |
| Msa1191210 | AT2G32250.1 | 33.981 | 206 | 129 | 2 | 1 | 206 | 352 | 550 | 4.31e-30 | 117 |
| Msa1191210 | AT2G32250.3 | 33.981 | 206 | 129 | 2 | 1 | 206 | 352 | 550 | 4.31e-30 | 117 |
| Msa1191210 | AT2G27110.3 | 35.407 | 209 | 127 | 6 | 1 | 209 | 234 | 434 | 3.70e-29 | 115 |
| Msa1191210 | AT1G80010.1 | 32.618 | 233 | 148 | 6 | 1 | 229 | 453 | 680 | 5.46e-29 | 114 |
| Msa1191210 | AT2G27110.2 | 35.407 | 209 | 127 | 6 | 1 | 209 | 379 | 579 | 5.67e-29 | 114 |
| Msa1191210 | AT2G27110.1 | 35.407 | 209 | 127 | 6 | 1 | 209 | 379 | 579 | 5.67e-29 | 114 |
| Msa1191210 | AT3G06250.2 | 31.100 | 209 | 135 | 3 | 1 | 209 | 505 | 704 | 1.31e-24 | 102 |
| Msa1191210 | AT3G06250.1 | 31.100 | 209 | 135 | 3 | 1 | 209 | 505 | 704 | 1.31e-24 | 102 |
| Msa1191210 | AT3G06250.3 | 31.100 | 209 | 135 | 3 | 1 | 209 | 505 | 704 | 1.31e-24 | 102 |
| Msa1191210 | AT5G18960.2 | 32.381 | 210 | 131 | 5 | 1 | 209 | 529 | 728 | 1.86e-24 | 101 |
| Msa1191210 | AT5G18960.1 | 32.381 | 210 | 131 | 5 | 1 | 209 | 529 | 728 | 1.86e-24 | 101 |
| Msa1191210 | AT1G10240.2 | 30.516 | 213 | 123 | 8 | 1 | 206 | 410 | 604 | 4.02e-20 | 89.0 |
| Msa1191210 | AT1G10240.1 | 30.516 | 213 | 123 | 8 | 1 | 206 | 410 | 604 | 4.02e-20 | 89.0 |
Find 35 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGCTTGTTTGAATTTAA+AGG | 0.112904 | 8_1:-35218595 | Msa1191210:CDS |
| CATATGTAAGGGACACATTT+TGG | 0.131035 | 8_1:-35219023 | Msa1191210:CDS |
| ATTTACCAATGCAAAGTTTA+AGG | 0.134414 | 8_1:-35218788 | Msa1191210:CDS |
| TGTGCCATCTAATTATATTT+TGG | 0.166070 | 8_1:-35218518 | Msa1191210:CDS |
| TAAATGTGGTGTTGATAATT+TGG | 0.259658 | 8_1:-35218455 | Msa1191210:CDS |
| TTTCAACAGATTGGAGGATT+TGG | 0.276962 | 8_1:-35218722 | Msa1191210:CDS |
| CTTTGTGTGCTTAAGCTCAT+AGG | 0.292164 | 8_1:-35218553 | Msa1191210:CDS |
| GATGAAAGATATTGTGTTCA+TGG | 0.400462 | 8_1:-35218656 | Msa1191210:CDS |
| ATTTCTTGTATTAGTCACTT+TGG | 0.417540 | 8_1:-35218835 | Msa1191210:CDS |
| TCATGCATGTTTCAACAGAT+TGG | 0.428105 | 8_1:-35218731 | Msa1191210:CDS |
| ATTTGTTGAGCGACATCGTT+GGG | 0.428935 | 8_1:-35219052 | Msa1191210:CDS |
| CGTGCCAAAATATAATTAGA+TGG | 0.452638 | 8_1:+35218514 | None:intergenic |
| GTTGGGTCCCTGCATATGTA+AGG | 0.456247 | 8_1:-35219035 | Msa1191210:CDS |
| AAAGTTTAAGGAATTCCAAT+TGG | 0.460527 | 8_1:-35218776 | Msa1191210:CDS |
| TCATAGAAGCTATTTCCAAT+TGG | 0.475525 | 8_1:+35218761 | None:intergenic |
| AATGTGTCCCTTACATATGC+AGG | 0.477892 | 8_1:+35219027 | None:intergenic |
| TTTGTGTGCTTAAGCTCATA+GGG | 0.489887 | 8_1:-35218552 | Msa1191210:CDS |
| TTTAAATTCAAACAAGCAGC+AGG | 0.496973 | 8_1:+35218597 | None:intergenic |
| AGGATAACGAATGGCTGAAA+GGG | 0.500694 | 8_1:-35219077 | Msa1191210:CDS |
| ATTGAAAGATAAAATTGAAA+AGG | 0.501824 | 8_1:-35218893 | Msa1191210:CDS |
| GAATTCCTTAAACTTTGCAT+TGG | 0.503666 | 8_1:+35218783 | None:intergenic |
| TGCATGTTTCAACAGATTGG+AGG | 0.514840 | 8_1:-35218728 | Msa1191210:CDS |
| CAGGATAACGAATGGCTGAA+AGG | 0.539689 | 8_1:-35219078 | Msa1191210:CDS |
| GATTGAGTGTTACAAACTAC+AGG | 0.556519 | 8_1:-35219097 | Msa1191210:CDS |
| TATCAACACCACATTTAACA+AGG | 0.590139 | 8_1:+35218461 | None:intergenic |
| TATTTGTTGAGCGACATCGT+TGG | 0.591607 | 8_1:-35219053 | Msa1191210:CDS |
| TTGGGTCCCTGCATATGTAA+GGG | 0.619298 | 8_1:-35219034 | Msa1191210:CDS |
| ATGTGTCCCTTACATATGCA+GGG | 0.621051 | 8_1:+35219028 | None:intergenic |
| AGGTATACCCTTGTTAAATG+TGG | 0.622387 | 8_1:-35218469 | Msa1191210:CDS |
| ATCAACACCACATTTAACAA+GGG | 0.638905 | 8_1:+35218462 | None:intergenic |
| ACAAACTACAGGATAACGAA+TGG | 0.644106 | 8_1:-35219086 | Msa1191210:CDS |
| CATTTAACAAGGGTATACCT+CGG | 0.672880 | 8_1:+35218472 | None:intergenic |
| CTATGAGCTTAAGCACACAA+AGG | 0.703144 | 8_1:+35218554 | None:intergenic |
| GGAGGAAGGATATAAAGCCG+AGG | 0.711941 | 8_1:-35218489 | Msa1191210:CDS |
| TTTATGAATTTGCTTCAACG+AGG | 0.719121 | 8_1:-35218430 | Msa1191210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAAAGATAAAATTGAAA+AGG | - | chr8_1:35218632-35218651 | Msa1191210:CDS | 15.0% |
| !!! | AATTTAAAGGCATTTTATGT+AGG | - | chr8_1:35218943-35218962 | Msa1191210:CDS | 20.0% |
| !!! | AGTATGAACTCATTTTTTGA+TGG | - | chr8_1:35218555-35218574 | Msa1191210:CDS | 25.0% |
| ! | ATTTCTTGTATTAGTCACTT+TGG | - | chr8_1:35218690-35218709 | Msa1191210:CDS | 25.0% |
| ! | ATTTACCAATGCAAAGTTTA+AGG | - | chr8_1:35218737-35218756 | Msa1191210:CDS | 25.0% |
| ! | AAAGTTTAAGGAATTCCAAT+TGG | - | chr8_1:35218749-35218768 | Msa1191210:CDS | 25.0% |
| !! | TGTGCCATCTAATTATATTT+TGG | - | chr8_1:35219007-35219026 | Msa1191210:CDS | 25.0% |
| !!! | CATCTAATTATATTTTGGCA+CGG | - | chr8_1:35219012-35219031 | Msa1191210:CDS | 25.0% |
| !!! | TAAATGTGGTGTTGATAATT+TGG | - | chr8_1:35219070-35219089 | Msa1191210:CDS | 25.0% |
| ! | ATATGTAAGGGACACATTTT+GGG | - | chr8_1:35218503-35218522 | Msa1191210:CDS | 30.0% |
| !!! | TGGTAAATGCTTTTTGGAAT+TGG | + | chr8_1:35218725-35218744 | None:intergenic | 30.0% |
| !! | TTGCATTGGTAAATGCTTTT+TGG | + | chr8_1:35218731-35218750 | None:intergenic | 30.0% |
| GAATTCCTTAAACTTTGCAT+TGG | + | chr8_1:35218745-35218764 | None:intergenic | 30.0% | |
| ! | TCATAGAAGCTATTTCCAAT+TGG | + | chr8_1:35218767-35218786 | None:intergenic | 30.0% |
| GATGAAAGATATTGTGTTCA+TGG | - | chr8_1:35218869-35218888 | Msa1191210:CDS | 30.0% | |
| TTTAAATTCAAACAAGCAGC+AGG | + | chr8_1:35218931-35218950 | None:intergenic | 30.0% | |
| ! | TGCTGCTTGTTTGAATTTAA+AGG | - | chr8_1:35218930-35218949 | Msa1191210:CDS | 30.0% |
| CGTGCCAAAATATAATTAGA+TGG | + | chr8_1:35219014-35219033 | None:intergenic | 30.0% | |
| ATCAACACCACATTTAACAA+GGG | + | chr8_1:35219066-35219085 | None:intergenic | 30.0% | |
| TATCAACACCACATTTAACA+AGG | + | chr8_1:35219067-35219086 | None:intergenic | 30.0% | |
| ! | TTTATGAATTTGCTTCAACG+AGG | - | chr8_1:35219095-35219114 | Msa1191210:CDS | 30.0% |
| GATTGAGTGTTACAAACTAC+AGG | - | chr8_1:35218428-35218447 | Msa1191210:CDS | 35.0% | |
| ACAAACTACAGGATAACGAA+TGG | - | chr8_1:35218439-35218458 | Msa1191210:CDS | 35.0% | |
| ! | CATATGTAAGGGACACATTT+TGG | - | chr8_1:35218502-35218521 | Msa1191210:CDS | 35.0% |
| TCATGCATGTTTCAACAGAT+TGG | - | chr8_1:35218794-35218813 | Msa1191210:CDS | 35.0% | |
| TTTCAACAGATTGGAGGATT+TGG | - | chr8_1:35218803-35218822 | Msa1191210:CDS | 35.0% | |
| TTTGTGTGCTTAAGCTCATA+GGG | - | chr8_1:35218973-35218992 | Msa1191210:CDS | 35.0% | |
| !!! | CTAATTATATTTTGGCACGG+TGG | - | chr8_1:35219015-35219034 | Msa1191210:CDS | 35.0% |
| ! | CATTTAACAAGGGTATACCT+CGG | + | chr8_1:35219056-35219075 | None:intergenic | 35.0% |
| AGGTATACCCTTGTTAAATG+TGG | - | chr8_1:35219056-35219075 | Msa1191210:CDS | 35.0% | |
| AGGATAACGAATGGCTGAAA+GGG | - | chr8_1:35218448-35218467 | Msa1191210:CDS | 40.0% | |
| ! | TATTTGTTGAGCGACATCGT+TGG | - | chr8_1:35218472-35218491 | Msa1191210:CDS | 40.0% |
| ! | ATTTGTTGAGCGACATCGTT+GGG | - | chr8_1:35218473-35218492 | Msa1191210:CDS | 40.0% |
| ATGTGTCCCTTACATATGCA+GGG | + | chr8_1:35218500-35218519 | None:intergenic | 40.0% | |
| AATGTGTCCCTTACATATGC+AGG | + | chr8_1:35218501-35218520 | None:intergenic | 40.0% | |
| TGCATGTTTCAACAGATTGG+AGG | - | chr8_1:35218797-35218816 | Msa1191210:CDS | 40.0% | |
| CTATGAGCTTAAGCACACAA+AGG | + | chr8_1:35218974-35218993 | None:intergenic | 40.0% | |
| CTTTGTGTGCTTAAGCTCAT+AGG | - | chr8_1:35218972-35218991 | Msa1191210:CDS | 40.0% | |
| !!! | ATTATATTTTGGCACGGTGG+AGG | - | chr8_1:35219018-35219037 | Msa1191210:CDS | 40.0% |
| CAGGATAACGAATGGCTGAA+AGG | - | chr8_1:35218447-35218466 | Msa1191210:CDS | 45.0% | |
| TTGGGTCCCTGCATATGTAA+GGG | - | chr8_1:35218491-35218510 | Msa1191210:CDS | 45.0% | |
| GTTGGGTCCCTGCATATGTA+AGG | - | chr8_1:35218490-35218509 | Msa1191210:CDS | 50.0% | |
| ! | GTAAGGGACACATTTTGGGC+TGG | - | chr8_1:35218507-35218526 | Msa1191210:CDS | 50.0% |
| !!! | TATTTTGGCACGGTGGAGGA+AGG | - | chr8_1:35219022-35219041 | Msa1191210:CDS | 50.0% |
| GGAGGAAGGATATAAAGCCG+AGG | - | chr8_1:35219036-35219055 | Msa1191210:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 35218426 | 35219121 | 35218426 | ID=Msa1191210;Name=Msa1191210 |
| chr8_1 | mRNA | 35218426 | 35219121 | 35218426 | ID=Msa1191210-mRNA-1;Parent=Msa1191210;Name=Msa1191210-mRNA-1;_AED=0.95;_eAED=0.95;_QI=0|-1|0|1|-1|1|1|0|231 |
| chr8_1 | exon | 35218426 | 35219121 | 35218426 | ID=Msa1191210-mRNA-1:exon:11677;Parent=Msa1191210-mRNA-1 |
| chr8_1 | CDS | 35218426 | 35219121 | 35218426 | ID=Msa1191210-mRNA-1:cds;Parent=Msa1191210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
