AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1200090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200090 MtrunA17_Chr8g0339861 66.530 487 161 1 1 485 1 487 0.0 694
Msa1200090 MtrunA17_Chr8g0381541 60.081 491 189 4 1 485 1 490 0.0 631
Msa1200090 MtrunA17_Chr8g0381571 59.219 461 181 4 1 455 1 460 0.0 583
Msa1200090 MtrunA17_Chr5g0400421 52.254 488 223 7 4 485 8 491 3.37e-173 496
Msa1200090 MtrunA17_Chr2g0293421 46.436 491 255 5 1 486 3 490 2.77e-163 471
Msa1200090 MtrunA17_Chr2g0293411 46.311 488 253 5 6 486 4 489 4.24e-163 470
Msa1200090 MtrunA17_Chr5g0400411 48.676 491 235 9 4 485 8 490 4.84e-155 450
Msa1200090 MtrunA17_Chr4g0000171 61.300 323 125 0 1 323 1 323 7.10e-149 428
Msa1200090 MtrunA17_Chr4g0013471 58.967 329 135 0 1 329 1 329 2.78e-144 419
Msa1200090 MtrunA17_Chr4g0000161 59.443 323 131 0 1 323 1 323 9.69e-143 413
Msa1200090 MtrunA17_Chr8g0381551 55.488 328 140 3 1 323 1 327 1.82e-131 384
Msa1200090 MtrunA17_Chr1g0161671 53.963 328 130 6 1 323 1 312 1.32e-109 328
Msa1200090 MtrunA17_Chr1g0161651 45.963 322 127 6 1 278 1 319 1.02e-82 259
Msa1200090 MtrunA17_Chr3g0089361 32.383 491 304 12 3 484 6 477 4.86e-78 251
Msa1200090 MtrunA17_Chr4g0044851 33.030 439 274 10 43 475 37 461 4.04e-73 239
Msa1200090 MtrunA17_Chr1g0153371 31.373 459 298 9 35 488 27 473 2.02e-70 232
Msa1200090 MtrunA17_Chr4g0000151 72.727 132 36 0 354 485 12 143 2.30e-70 220
Msa1200090 MtrunA17_Chr5g0408181 32.000 475 290 14 12 476 4 455 2.87e-70 231
Msa1200090 MtrunA17_Chr8g0369791 30.705 482 301 13 1 475 1 456 1.35e-67 224
Msa1200090 MtrunA17_Chr8g0388921 31.929 451 299 6 31 476 22 469 1.37e-67 224
Msa1200090 MtrunA17_Chr3g0089351 31.436 404 265 7 84 484 1 395 4.05e-64 213
Msa1200090 MtrunA17_Chr4g0044841 31.839 446 284 10 35 473 29 461 5.65e-64 214
Msa1200090 MtrunA17_Chr7g0226771 30.876 434 283 10 41 467 31 454 6.13e-63 212
Msa1200090 MtrunA17_Chr3g0113321 32.488 434 258 14 35 451 21 436 7.91e-63 212
Msa1200090 MtrunA17_Chr8g0341951 29.828 466 297 13 1 456 1 446 1.20e-61 208
Msa1200090 MtrunA17_Chr5g0403931 32.401 429 265 14 43 457 36 453 3.91e-61 207
Msa1200090 MtrunA17_Chr6g0455461 30.088 452 283 13 33 473 25 454 8.42e-60 203
Msa1200090 MtrunA17_Chr3g0078411 30.088 452 283 13 33 473 25 454 1.50e-59 202
Msa1200090 MtrunA17_Chr5g0397971 29.186 442 288 11 30 459 18 446 8.54e-59 201
Msa1200090 MtrunA17_Chr1g0164371 31.042 451 290 11 37 481 38 473 2.70e-57 197
Msa1200090 MtrunA17_Chr5g0443731 27.865 445 310 8 43 481 29 468 3.75e-57 196
Msa1200090 MtrunA17_Chr7g0219961 29.252 441 272 14 33 459 25 439 4.41e-57 196
Msa1200090 MtrunA17_Chr5g0443401 28.723 470 317 12 13 474 8 467 8.50e-56 193
Msa1200090 MtrunA17_Chr8g0372411 31.306 444 273 15 44 472 40 466 3.08e-55 192
Msa1200090 MtrunA17_Chr3g0107501 28.728 456 298 10 34 474 24 467 2.74e-54 189
Msa1200090 MtrunA17_Chr3g0107511 29.345 443 294 9 43 474 33 467 3.53e-53 186
Msa1200090 MtrunA17_Chr6g0478161 28.289 456 293 15 43 480 50 489 6.87e-52 183
Msa1200090 MtrunA17_Chr8g0380471 29.596 446 303 8 35 475 28 467 7.03e-52 182
Msa1200090 MtrunA17_Chr8g0381561 64.545 110 38 1 347 455 2 111 5.97e-49 164
Msa1200090 MtrunA17_Chr8g0373441 30.941 404 253 15 35 424 25 416 2.84e-47 169
Msa1200090 MtrunA17_Chr3g0141801 27.674 430 288 12 43 460 41 459 3.03e-45 165
Msa1200090 MtrunA17_Chr8g0372711 25.721 451 301 13 45 472 48 487 5.38e-43 159
Msa1200090 MtrunA17_Chr8g0380931 25.435 460 293 14 43 476 62 497 2.31e-40 152
Msa1200090 MtrunA17_Chr1g0161661 65.169 89 31 0 396 484 12 100 4.18e-40 140
Msa1200090 MtrunA17_Chr5g0400391 63.218 87 32 0 397 483 1 87 2.87e-37 132
Msa1200090 MtrunA17_Chr1g0161691 47.445 137 67 2 102 234 1 136 1.25e-36 132
Msa1200090 MtrunA17_Chr3g0116741 26.115 471 274 16 17 435 12 460 8.66e-30 122
Msa1200090 MtrunA17_Chr1g0161641 58.228 79 33 0 377 455 10 88 9.73e-30 111
Msa1200090 MtrunA17_Chr4g0076161 26.898 461 282 20 29 450 23 467 2.70e-29 120
Msa1200090 MtrunA17_Chr3g0101721 27.477 444 273 20 43 450 37 467 5.42e-29 119
Msa1200090 MtrunA17_Chr8g0372251 25.397 441 271 17 35 435 28 450 8.94e-29 119
Msa1200090 MtrunA17_Chr4g0058261 25.917 436 266 16 42 439 64 480 4.91e-28 117
Msa1200090 MtrunA17_Chr5g0404861 40.602 133 76 2 328 457 2 134 6.04e-28 109
Msa1200090 MtrunA17_Chr6g0463791 26.522 460 277 19 32 450 24 463 6.11e-28 116
Msa1200090 MtrunA17_Chr1g0174461 26.770 452 262 22 36 439 26 456 1.57e-27 115
Msa1200090 MtrunA17_Chr4g0035921 26.539 471 275 19 32 450 26 477 1.68e-27 115
Msa1200090 MtrunA17_Chr5g0405001 25.221 452 284 17 44 457 45 480 2.38e-27 115
Msa1200090 MtrunA17_Chr4g0047631 26.374 455 285 18 30 450 38 476 3.90e-27 114
Msa1200090 MtrunA17_Chr5g0445381 25.052 483 310 18 1 450 32 495 5.17e-27 114
Msa1200090 MtrunA17_Chr5g0445421 26.267 434 266 17 43 450 112 517 7.61e-27 114
Msa1200090 MtrunA17_Chr3g0101731 26.164 451 269 19 43 450 36 465 1.92e-26 112
Msa1200090 MtrunA17_Chr3g0101821 26.030 461 278 19 35 450 23 465 3.03e-26 111
Msa1200090 MtrunA17_Chr4g0058281 25.333 450 274 17 32 439 33 462 3.74e-26 111
Msa1200090 MtrunA17_Chr3g0101751 25.380 461 281 19 35 450 30 472 3.83e-26 111
Msa1200090 MtrunA17_Chr5g0437001 45.370 108 55 2 348 451 1 108 5.13e-26 103
Msa1200090 MtrunA17_Chr1g0174441 24.550 444 281 17 37 439 48 478 5.26e-26 111
Msa1200090 MtrunA17_Chr3g0101581 26.273 491 282 25 8 450 8 466 1.15e-25 110
Msa1200090 MtrunA17_Chr5g0431671 25.778 450 270 19 43 450 38 465 1.20e-25 109
Msa1200090 MtrunA17_Chr5g0430081 25.161 465 294 19 32 457 20 469 1.23e-25 109
Msa1200090 MtrunA17_Chr1g0160851 24.615 455 295 14 35 457 26 464 1.26e-25 109
Msa1200090 MtrunA17_Chr3g0101631 25.333 450 285 17 35 450 28 460 2.11e-25 108
Msa1200090 MtrunA17_Chr4g0052851 26.667 450 282 21 37 460 27 454 2.32e-25 108
Msa1200090 MtrunA17_Chr1g0205361 24.348 460 290 16 35 457 26 464 4.23e-25 108
Msa1200090 MtrunA17_Chr5g0445441 25.056 447 276 18 43 450 79 505 4.54e-25 108
Msa1200090 MtrunA17_Chr1g0198191 23.647 499 313 18 4 461 17 488 5.30e-25 108
Msa1200090 MtrunA17_Chr5g0430031 24.783 460 282 17 35 450 29 468 6.54e-25 107
Msa1200090 MtrunA17_Chr4g0058201 25.435 460 293 18 30 457 18 459 7.26e-25 107
Msa1200090 MtrunA17_Chr4g0053621 24.289 457 287 16 43 460 31 467 8.10e-25 107
Msa1200090 MtrunA17_Chr3g0101831 24.183 459 286 18 35 450 27 466 1.07e-24 107
Msa1200090 MtrunA17_Chr5g0395321 25.107 466 302 16 28 464 24 471 1.24e-24 107
Msa1200090 MtrunA17_Chr3g0101801 25.983 458 282 21 35 450 30 472 1.42e-24 106
Msa1200090 MtrunA17_Chr5g0395331 25.625 480 310 14 19 464 12 478 1.72e-24 106
Msa1200090 MtrunA17_Chr6g0451681 25.490 459 277 20 23 460 39 453 2.52e-24 105
Msa1200090 MtrunA17_Chr1g0162801 25.546 458 284 17 33 450 27 467 3.24e-24 105
Msa1200090 MtrunA17_Chr6g0451781 26.984 504 273 25 51 477 75 560 3.36e-24 105
Msa1200090 MtrunA17_Chr6g0451811 35.047 214 108 8 289 477 1 208 3.72e-24 100
Msa1200090 MtrunA17_Chr5g0445451 24.426 479 308 19 43 483 38 500 4.06e-24 105
Msa1200090 MtrunA17_Chr6g0451691 30.400 250 150 7 230 461 255 498 4.39e-24 105
Msa1200090 MtrunA17_Chr5g0403321 25.847 472 269 17 34 450 25 470 4.46e-24 105
Msa1200090 MtrunA17_Chr7g0235551 28.080 349 213 12 135 451 127 469 5.29e-24 105
Msa1200090 MtrunA17_Chr8g0390881 25.000 456 267 19 44 451 37 465 5.67e-24 104
Msa1200090 MtrunA17_Chr1g0164211 25.602 457 297 15 32 459 21 463 6.33e-24 104
Msa1200090 MtrunA17_Chr3g0116681 25.216 464 287 18 37 463 34 474 6.41e-24 104
Msa1200090 MtrunA17_Chr3g0101621 24.888 446 274 17 43 450 33 455 7.54e-24 104
Msa1200090 MtrunA17_Chr3g0101761 25.110 454 271 19 43 450 35 465 1.01e-23 103
Msa1200090 MtrunA17_Chr6g0458561 31.698 265 156 10 228 474 260 517 1.01e-23 104
Msa1200090 MtrunA17_Chr5g0401691 26.030 461 265 19 43 459 51 479 1.14e-23 103
Msa1200090 MtrunA17_Chr8g0344151 26.269 453 269 21 43 450 36 468 1.16e-23 103
Msa1200090 MtrunA17_Chr3g0084921 27.416 445 256 22 43 439 35 460 1.31e-23 103
Msa1200090 MtrunA17_Chr3g0101601 25.503 447 273 15 43 450 36 461 1.40e-23 103
Msa1200090 MtrunA17_Chr5g0431511 26.362 459 272 19 43 457 33 469 1.43e-23 103
Msa1200090 MtrunA17_Chr1g0174451 24.609 447 275 21 37 439 29 457 1.49e-23 103
Msa1200090 MtrunA17_Chr5g0431641 25.442 452 268 19 43 450 38 464 1.62e-23 103
Msa1200090 MtrunA17_Chr4g0030701 25.105 474 296 18 37 465 28 487 2.49e-23 103
Msa1200090 MtrunA17_Chr6g0451741 30.851 282 159 11 228 477 272 549 2.88e-23 103
Msa1200090 MtrunA17_Chr8g0357421 25.223 448 276 17 43 450 37 465 4.79e-23 102
Msa1200090 MtrunA17_Chr5g0395381 26.000 450 293 15 28 464 24 446 6.27e-23 101
Msa1200090 MtrunA17_Chr1g0205371 24.454 458 286 15 35 454 27 462 6.85e-23 101
Msa1200090 MtrunA17_Chr4g0020041 26.164 451 269 20 43 450 37 466 7.51e-23 101
Msa1200090 MtrunA17_Chr4g0047661 24.439 446 277 17 30 435 37 462 7.91e-23 101
Msa1200090 MtrunA17_Chr2g0314721 25.458 491 295 20 26 470 27 492 7.93e-23 101
Msa1200090 MtrunA17_Chr5g0445531 25.277 451 269 20 43 450 38 463 8.35e-23 101
Msa1200090 MtrunA17_Chr6g0463551 32.787 183 108 6 205 379 14 189 9.09e-23 95.9
Msa1200090 MtrunA17_Chr5g0403351 24.731 465 289 17 30 450 20 467 9.61e-23 101
Msa1200090 MtrunA17_Chr8g0356001 25.694 432 269 16 43 439 41 455 1.03e-22 101
Msa1200090 MtrunA17_Chr7g0265611 26.514 479 282 19 35 466 38 493 1.34e-22 100
Msa1200090 MtrunA17_Chr4g0024771 23.899 477 301 17 44 478 39 495 1.52e-22 100
Msa1200090 MtrunA17_Chr4g0039391 23.645 406 255 11 95 459 80 471 1.62e-22 100
Msa1200090 MtrunA17_Chr4g0039901 26.096 456 274 14 43 457 35 468 2.62e-22 99.8
Msa1200090 MtrunA17_Chr1g0162811 23.326 463 285 19 33 450 27 464 3.49e-22 99.4
Msa1200090 MtrunA17_Chr4g0058191 28.814 236 155 6 230 457 227 457 3.56e-22 99.4
Msa1200090 MtrunA17_Chr1g0197851 26.078 464 285 15 37 464 28 469 4.14e-22 99.0
Msa1200090 MtrunA17_Chr3g0089381 28.436 211 142 5 184 392 2 205 4.52e-22 94.7
Msa1200090 MtrunA17_Chr1g0197881 26.078 464 285 15 37 464 27 468 4.67e-22 99.0
Msa1200090 MtrunA17_Chr3g0101711 24.390 451 279 19 43 450 37 468 4.92e-22 99.0
Msa1200090 MtrunA17_Chr8g0351801 26.891 357 212 14 117 439 126 467 5.11e-22 99.0
Msa1200090 MtrunA17_Chr1g0197871 26.033 484 284 18 35 470 26 483 5.28e-22 99.0
Msa1200090 MtrunA17_Chr3g0082701 30.242 248 141 10 228 450 250 490 6.33e-22 99.0
Msa1200090 MtrunA17_Chr1g0207841 25.613 367 229 14 135 465 131 489 6.82e-22 98.6
Msa1200090 MtrunA17_Chr7g0218611 33.937 221 131 7 235 445 242 457 7.04e-22 98.6
Msa1200090 MtrunA17_Chr3g0101671 32.189 233 137 9 235 450 241 469 7.39e-22 98.6
Msa1200090 MtrunA17_Chr1g0167321 25.166 453 288 19 36 450 25 464 8.35e-22 98.2
Msa1200090 MtrunA17_Chr8g0361471 25.630 476 259 19 32 450 28 465 1.08e-21 98.2
Msa1200090 MtrunA17_Chr4g0057001 24.324 518 296 22 29 480 34 521 1.11e-21 98.2
Msa1200090 MtrunA17_Chr7g0258211 29.870 231 135 7 228 439 239 461 1.30e-21 97.8
Msa1200090 MtrunA17_Chr8g0355961 25.160 469 280 19 35 457 32 475 1.34e-21 97.8
Msa1200090 MtrunA17_Chr4g0058231 23.044 473 297 20 30 457 18 468 1.36e-21 97.8
Msa1200090 MtrunA17_Chr1g0160861 28.352 261 174 6 203 457 52 305 1.57e-21 95.5
Msa1200090 MtrunA17_Chr1g0197891 25.652 460 292 15 37 464 28 469 1.60e-21 97.4
Msa1200090 MtrunA17_Chr4g0047691 25.412 425 269 18 43 435 52 460 1.75e-21 97.4
Msa1200090 MtrunA17_Chr3g0094171 25.949 474 294 23 28 464 25 478 1.79e-21 97.4
Msa1200090 MtrunA17_Chr8g0346261 28.185 259 157 8 239 488 296 534 1.93e-21 97.4
Msa1200090 MtrunA17_Chr5g0446161 24.270 445 289 18 43 457 41 467 2.07e-21 97.1
Msa1200090 MtrunA17_Chr6g0466941 32.927 246 137 9 228 450 243 483 2.19e-21 97.1
Msa1200090 MtrunA17_Chr4g0047641 25.111 450 276 19 43 450 50 480 2.23e-21 97.1
Msa1200090 MtrunA17_Chr2g0310381 24.070 457 297 19 29 450 16 457 2.37e-21 97.1
Msa1200090 MtrunA17_Chr2g0314731 24.681 470 307 16 35 470 25 481 2.40e-21 96.7
Msa1200090 MtrunA17_Chr1g0174481 23.789 475 299 19 2 439 3 451 2.49e-21 97.1
Msa1200090 MtrunA17_Chr6g0451751 30.769 247 146 8 228 453 251 493 2.84e-21 97.1
Msa1200090 MtrunA17_Chr3g0101611 25.658 456 281 17 43 460 38 473 3.17e-21 96.7
Msa1200090 MtrunA17_Chr3g0101651 24.283 453 277 18 43 450 38 469 3.17e-21 96.7
Msa1200090 MtrunA17_Chr3g0101811 23.591 479 288 19 34 456 28 484 3.35e-21 96.7
Msa1200090 MtrunA17_Chr7g0218601 31.944 216 130 6 238 443 246 454 3.68e-21 96.3
Msa1200090 MtrunA17_Chr5g0401681 23.810 462 294 16 34 459 23 462 5.88e-21 95.9
Msa1200090 MtrunA17_Chr7g0215181 25.937 347 223 9 131 456 147 480 6.26e-21 95.9
Msa1200090 MtrunA17_Chr8g0362481 31.489 235 124 10 228 439 167 387 6.90e-21 95.1
Msa1200090 MtrunA17_Chr2g0310391 24.724 453 277 18 43 452 28 459 7.20e-21 95.5
Msa1200090 MtrunA17_Chr5g0445461 23.649 444 286 19 43 450 38 464 7.41e-21 95.5
Msa1200090 MtrunA17_Chr8g0382901 24.726 457 288 21 23 450 10 439 9.14e-21 96.3
Msa1200090 MtrunA17_Chr8g0382901 24.396 455 281 19 37 450 486 918 8.56e-18 86.7
Msa1200090 MtrunA17_Chr8g0339331 29.918 244 153 7 228 457 244 483 1.03e-20 95.1
Msa1200090 MtrunA17_Chr8g0344191 24.890 454 281 21 27 439 53 487 1.25e-20 95.1
Msa1200090 MtrunA17_Chr3g0101741 31.193 218 136 7 242 450 175 387 1.28e-20 94.0
Msa1200090 MtrunA17_Chr6g0484811 24.200 500 286 23 37 470 31 503 2.01e-20 94.0
Msa1200090 MtrunA17_Chr4g0046351 29.388 245 148 7 230 457 237 473 2.24e-20 94.0
Msa1200090 MtrunA17_Chr6g0466331 30.638 235 138 9 235 450 237 465 2.65e-20 94.0
Msa1200090 MtrunA17_Chr7g0246131 24.229 454 287 14 43 456 34 470 2.87e-20 93.6
Msa1200090 MtrunA17_Chr6g0465511 30.638 235 138 9 235 450 237 465 3.44e-20 93.6
Msa1200090 MtrunA17_Chr1g0176831 24.632 475 301 19 35 470 55 511 5.60e-20 92.8
Msa1200090 MtrunA17_Chr3g0101701 23.348 454 280 18 43 450 38 469 5.97e-20 92.8
Msa1200090 MtrunA17_Chr4g0046321 30.159 252 147 8 230 462 237 478 6.50e-20 92.8
Msa1200090 MtrunA17_Chr6g0466901 32.468 231 133 9 238 450 257 482 7.55e-20 92.4
Msa1200090 MtrunA17_Chr4g0046331 29.762 252 148 8 230 461 237 479 7.67e-20 92.4
Msa1200090 MtrunA17_Chr3g0101691 24.576 472 276 22 34 450 23 469 9.43e-20 92.0
Msa1200090 MtrunA17_Chr6g0451641 25.417 480 287 19 35 460 31 493 1.07e-19 92.0
Msa1200090 MtrunA17_Chr5g0446151 23.661 448 283 15 43 454 41 465 1.20e-19 91.7
Msa1200090 MtrunA17_Chr3g0089291 25.926 243 168 5 84 322 1 235 1.21e-19 88.2
Msa1200090 MtrunA17_Chr5g0431501 28.125 224 149 5 242 457 250 469 1.23e-19 91.7
Msa1200090 MtrunA17_Chr5g0431461 28.125 224 149 5 242 457 250 469 1.23e-19 91.7
Msa1200090 MtrunA17_Chr8g0344181 24.887 442 263 17 43 439 38 455 1.25e-19 91.7
Msa1200090 MtrunA17_Chr4g0058211 30.939 181 115 4 283 457 9 185 1.35e-19 87.4
Msa1200090 MtrunA17_Chr4g0052861 25.270 463 280 21 38 460 27 463 1.50e-19 91.3
Msa1200090 MtrunA17_Chr5g0430131 24.070 457 286 17 41 457 35 470 1.59e-19 91.3
Msa1200090 MtrunA17_Chr5g0403331 24.722 449 286 18 41 450 33 468 1.64e-19 91.3
Msa1200090 MtrunA17_Chr4g0030711 26.453 344 205 13 135 439 130 464 2.21e-19 90.9
Msa1200090 MtrunA17_Chr7g0224551 24.625 467 282 22 43 462 31 474 2.63e-19 90.9
Msa1200090 MtrunA17_Chr5g0431591 30.172 232 138 9 235 450 59 282 3.83e-19 88.2
Msa1200090 MtrunA17_Chr7g0246221 24.891 458 290 16 35 454 26 467 4.70e-19 90.1
Msa1200090 MtrunA17_Chr7g0255531 25.160 469 275 20 43 461 28 470 4.92e-19 89.7
Msa1200090 MtrunA17_Chr1g0203141 25.852 352 230 13 126 461 154 490 5.42e-19 89.7
Msa1200090 MtrunA17_Chr6g0463801 24.541 436 290 15 34 443 28 450 5.92e-19 89.7
Msa1200090 MtrunA17_Chr4g0017411 24.945 453 286 19 37 460 24 451 6.82e-19 89.4
Msa1200090 MtrunA17_Chr7g0246181 28.458 253 163 6 216 456 222 468 7.55e-19 89.4
Msa1200090 MtrunA17_Chr6g0457421 29.614 233 152 7 229 456 253 478 1.15e-18 88.6
Msa1200090 MtrunA17_Chr5g0432751 24.230 487 264 21 35 456 25 471 1.18e-18 88.6
Msa1200090 MtrunA17_Chr5g0430091 24.473 474 290 21 31 457 19 471 1.29e-18 88.6
Msa1200090 MtrunA17_Chr2g0280121 29.412 238 152 9 234 457 244 479 1.60e-18 88.2
Msa1200090 MtrunA17_Chr3g0101661 25.106 470 275 21 34 450 23 468 1.69e-18 88.2
Msa1200090 MtrunA17_Chr7g0224561 23.555 467 287 22 43 462 31 474 2.15e-18 87.8
Msa1200090 MtrunA17_Chr3g0086661 32.246 276 149 11 190 439 192 455 2.24e-18 87.8
Msa1200090 MtrunA17_Chr8g0357431 24.889 450 276 17 43 450 37 466 2.36e-18 87.8
Msa1200090 MtrunA17_Chr2g0280071 23.230 452 304 15 42 457 62 506 2.74e-18 88.2
Msa1200090 MtrunA17_Chr5g0419451 25.325 308 193 9 178 456 187 486 3.02e-18 87.4
Msa1200090 MtrunA17_Chr4g0011871 26.444 450 280 17 44 457 30 464 3.18e-18 87.4
Msa1200090 MtrunA17_Chr0c19g0493771 28.634 227 143 7 240 457 403 619 3.40e-18 87.8
Msa1200090 MtrunA17_Chr1g0200961 25.000 456 270 20 44 450 29 461 4.29e-18 87.0
Msa1200090 MtrunA17_Chr8g0362701 30.396 227 137 10 228 439 236 456 5.57e-18 86.7
Msa1200090 MtrunA17_Chr4g0008101 27.972 286 171 12 228 482 251 532 6.24e-18 86.7
Msa1200090 MtrunA17_Chr1g0203151 28.452 239 153 8 232 461 257 486 6.54e-18 86.3
Msa1200090 MtrunA17_Chr4g0011921 25.386 453 274 18 44 454 30 460 9.56e-18 85.9
Msa1200090 MtrunA17_Chr4g0011961 28.507 221 138 9 245 454 248 459 1.41e-17 85.5
Msa1200090 MtrunA17_Chr2g0313831 23.756 442 287 18 52 450 51 485 1.45e-17 85.5
Msa1200090 MtrunA17_Chr7g0235261 24.350 423 262 19 78 463 87 488 1.48e-17 85.5
Msa1200090 MtrunA17_Chr6g0463541 42.353 85 48 1 375 459 2 85 1.92e-17 78.2
Msa1200090 MtrunA17_Chr1g0174471 23.400 500 296 23 37 472 44 520 2.12e-17 85.1
Msa1200090 MtrunA17_Chr2g0296661 28.696 230 147 5 240 458 243 466 2.13e-17 84.7
Msa1200090 MtrunA17_Chr7g0246151 29.114 237 151 8 238 462 246 477 2.59e-17 84.7
Msa1200090 MtrunA17_Chr1g0154731 29.046 241 153 8 226 456 242 474 2.61e-17 84.7
Msa1200090 MtrunA17_Chr4g0063221 26.479 355 231 12 130 461 147 494 3.15e-17 84.3
Msa1200090 MtrunA17_Chr3g0135841 24.386 529 300 19 1 456 4 505 3.61e-17 84.3
Msa1200090 MtrunA17_Chr1g0193811 22.440 459 299 16 37 450 39 485 3.61e-17 84.3
Msa1200090 MtrunA17_Chr4g0011901 24.229 454 278 23 44 454 30 460 3.63e-17 84.0
Msa1200090 MtrunA17_Chr3g0086651 31.884 276 150 12 190 439 192 455 4.37e-17 84.0
Msa1200090 MtrunA17_Chr3g0094231 23.077 442 283 17 36 439 29 451 6.80e-17 83.2
Msa1200090 MtrunA17_Chr2g0280081 29.353 201 132 5 267 457 774 974 7.27e-17 84.0
Msa1200090 MtrunA17_Chr2g0280081 27.363 201 136 5 267 457 273 473 3.29e-14 75.5
Msa1200090 MtrunA17_Chr6g0472311 22.410 473 314 16 23 456 24 482 7.99e-17 83.2
Msa1200090 MtrunA17_Chr5g0430101 22.629 464 283 18 41 457 34 468 8.19e-17 83.2
Msa1200090 MtrunA17_Chr7g0258221 23.476 443 280 16 39 439 30 455 1.28e-16 82.4
Msa1200090 MtrunA17_Chr8g0364651 20.309 453 326 14 39 462 26 472 1.47e-16 82.0
Msa1200090 MtrunA17_Chr6g0479681 29.008 262 150 10 227 457 245 501 1.49e-16 82.4
Msa1200090 MtrunA17_Chr1g0200951 25.368 272 168 9 232 489 268 518 1.55e-16 82.4
Msa1200090 MtrunA17_Chr4g0052881 25.054 463 289 19 34 460 24 464 1.58e-16 82.0
Msa1200090 MtrunA17_Chr5g0419691 25.835 449 283 17 44 457 30 463 2.23e-16 81.6
Msa1200090 MtrunA17_Chr6g0484841 24.890 454 271 20 44 450 38 468 2.24e-16 81.6
Msa1200090 MtrunA17_Chr5g0446101 31.343 201 121 6 243 435 67 258 2.52e-16 79.7
Msa1200090 MtrunA17_Chr2g0280011 27.778 180 121 4 286 456 1 180 2.70e-16 77.8
Msa1200090 MtrunA17_Chr1g0156101 24.740 481 274 22 32 450 21 475 3.06e-16 81.3
Msa1200090 MtrunA17_Chr8g0364081 27.106 273 167 12 218 465 258 523 3.23e-16 81.3
Msa1200090 MtrunA17_Chr8g0370641 29.762 252 153 9 212 447 234 477 3.46e-16 81.3
Msa1200090 MtrunA17_Chr6g0451771 32.308 195 113 6 276 455 2 192 4.00e-16 77.8
Msa1200090 MtrunA17_Chr5g0396521 26.147 218 120 5 275 457 330 541 5.15e-16 80.9
Msa1200090 MtrunA17_Chr4g0011851 30.636 173 106 4 293 457 16 182 5.42e-16 77.0
Msa1200090 MtrunA17_Chr1g0179811 26.522 230 128 6 264 459 291 513 5.64e-16 80.5
Msa1200090 MtrunA17_Chr5g0430111 24.697 413 255 16 41 417 35 427 6.68e-16 79.7
Msa1200090 MtrunA17_Chr4g0046681 29.240 171 105 4 292 450 30 196 7.67e-16 77.0
Msa1200090 MtrunA17_Chr8g0390871 28.497 193 128 4 271 457 5 193 8.69e-16 76.6
Msa1200090 MtrunA17_Chr4g0046631 23.884 448 283 16 51 450 47 484 9.27e-16 79.7
Msa1200090 MtrunA17_Chr4g0056951 26.966 267 157 10 243 480 259 516 9.36e-16 79.7
Msa1200090 MtrunA17_Chr3g0086691 29.719 249 149 10 232 462 241 481 1.14e-15 79.3
Msa1200090 MtrunA17_Chr4g0011881 30.131 229 144 8 238 457 242 463 1.32e-15 79.3
Msa1200090 MtrunA17_Chr8g0370651 29.084 251 156 8 212 447 238 481 1.63e-15 79.0
Msa1200090 MtrunA17_Chr6g0449381 24.309 362 238 11 137 465 127 485 1.90e-15 79.0
Msa1200090 MtrunA17_Chr8g0339311 27.626 257 165 7 212 454 239 488 2.16e-15 78.6
Msa1200090 MtrunA17_Chr2g0296651 24.348 460 297 14 34 460 22 463 2.16e-15 78.6
Msa1200090 MtrunA17_Chr1g0174431 31.875 160 91 5 293 439 1 155 2.25e-15 75.1
Msa1200090 MtrunA17_Chr5g0406651 27.391 230 150 6 238 457 242 464 2.39e-15 78.6
Msa1200090 MtrunA17_Chr2g0313791 25.672 335 182 13 184 457 155 483 2.45e-15 78.6
Msa1200090 MtrunA17_Chr6g0463621 31.579 171 100 5 293 450 1 167 2.54e-15 74.7
Msa1200090 MtrunA17_Chr4g0061381 27.304 293 173 11 198 464 199 477 3.31e-15 78.2
Msa1200090 MtrunA17_Chr8g0336361 26.023 342 183 15 180 463 207 536 4.37e-15 77.8
Msa1200090 MtrunA17_Chr2g0313821 26.316 228 148 7 244 457 267 488 4.61e-15 77.8
Msa1200090 MtrunA17_Chr8g0362731 29.032 186 117 5 286 463 208 386 5.11e-15 77.0
Msa1200090 MtrunA17_Chr5g0409051 24.074 270 177 9 210 456 213 477 5.49e-15 77.4
Msa1200090 MtrunA17_Chr4g0074581 22.689 476 306 19 43 476 69 524 6.10e-15 77.4
Msa1200090 MtrunA17_Chr2g0313811 26.357 258 164 9 220 457 249 500 6.70e-15 77.0
Msa1200090 MtrunA17_Chr2g0313751 25.926 243 156 8 226 450 276 512 7.17e-15 77.0
Msa1200090 MtrunA17_Chr2g0280061 27.222 180 122 4 286 456 1 180 8.54e-15 73.6
Msa1200090 MtrunA17_Chr2g0310351 26.404 178 121 3 293 464 1 174 9.41e-15 73.2
Msa1200090 MtrunA17_Chr8g0354511 26.102 295 174 11 197 457 212 496 1.12e-14 76.3
Msa1200090 MtrunA17_Chr7g0227281 29.808 208 136 4 261 459 262 468 1.25e-14 76.3
Msa1200090 MtrunA17_Chr4g0004601 25.497 302 194 11 181 463 220 509 1.35e-14 76.3
Msa1200090 MtrunA17_Chr2g0304871 24.301 465 293 21 34 450 27 480 1.48e-14 75.9
Msa1200090 MtrunA17_Chr2g0313781 27.778 252 156 10 226 457 255 500 1.60e-14 75.9
Msa1200090 MtrunA17_Chr8g0387101 29.167 192 120 6 279 457 287 475 1.65e-14 75.9
Msa1200090 MtrunA17_Chr5g0413911 22.083 480 299 19 39 460 39 501 2.04e-14 75.5
Msa1200090 MtrunA17_Chr1g0156081 22.803 478 281 16 35 450 48 499 2.15e-14 75.5
Msa1200090 MtrunA17_Chr2g0313801 26.667 255 161 10 218 457 245 488 2.25e-14 75.5
Msa1200090 MtrunA17_Chr6g0472221 24.269 342 232 13 134 457 166 498 2.67e-14 75.1
Msa1200090 MtrunA17_Chr4g0011941 29.070 172 110 5 293 457 1 167 3.61e-14 71.2
Msa1200090 MtrunA17_Chr7g0246121 25.969 258 166 7 214 456 219 466 4.49e-14 74.3
Msa1200090 MtrunA17_Chr4g0011981 27.273 209 136 8 259 457 261 463 4.67e-14 74.3
Msa1200090 MtrunA17_Chr2g0280261 23.288 438 283 16 35 439 26 443 5.00e-14 74.3
Msa1200090 MtrunA17_Chr2g0280041 29.319 191 120 6 279 457 318 505 8.08e-14 73.9
Msa1200090 MtrunA17_Chr5g0430071 28.251 223 138 8 229 435 86 302 1.16e-13 72.4
Msa1200090 MtrunA17_Chr1g0151221 23.327 493 287 21 31 457 31 498 1.46e-13 72.8
Msa1200090 MtrunA17_Chr2g0313761 25.490 255 166 9 217 457 239 483 1.52e-13 72.8
Msa1200090 MtrunA17_Chr5g0446131 28.000 225 138 9 244 450 265 483 1.54e-13 72.8
Msa1200090 MtrunA17_Chr5g0436991 35.849 106 62 2 218 323 56 155 8.79e-13 66.2
Msa1200090 MtrunA17_Chr7g0254641 29.907 214 125 8 242 439 259 463 9.11e-13 70.5
Msa1200090 MtrunA17_Chr3g0101591 30.539 167 102 5 294 450 40 202 9.12e-13 68.2
Msa1200090 MtrunA17_Chr1g0156061 25.541 231 156 6 235 454 206 431 1.03e-12 70.1
Msa1200090 MtrunA17_Chr2g0314781 32.370 173 101 7 309 470 1 168 1.05e-12 66.2
Msa1200090 MtrunA17_Chr7g0248991 28.814 177 113 5 240 413 185 351 1.71e-12 68.9
Msa1200090 MtrunA17_Chr2g0307301 24.786 234 156 7 238 457 263 490 1.91e-12 69.3
Msa1200090 MtrunA17_Chr7g0227291 25.641 234 162 4 234 459 239 468 2.09e-12 69.3
Msa1200090 MtrunA17_Chr4g0004481 26.906 223 151 5 242 454 241 461 4.21e-12 68.2
Msa1200090 MtrunA17_Chr8g0364631 22.588 456 300 16 43 457 32 475 8.67e-12 67.4
Msa1200090 MtrunA17_Chr8g0387001 22.484 467 301 15 46 463 29 483 1.47e-11 66.6
Msa1200090 MtrunA17_Chr5g0402981 28.750 160 97 5 304 450 3 158 2.96e-11 62.8
Msa1200090 MtrunA17_Chr1g0163501 22.500 360 245 10 131 459 117 473 3.83e-11 65.1
Msa1200090 MtrunA17_Chr5g0445761 30.000 170 101 6 293 450 1 164 3.97e-11 62.8
Msa1200090 MtrunA17_Chr4g0046661 29.670 182 111 5 282 450 13 190 3.99e-11 63.2
Msa1200090 MtrunA17_Chr5g0445351 35.897 117 65 4 344 450 71 187 4.04e-11 62.8
Msa1200090 MtrunA17_Chr6g0449331 23.820 466 286 21 45 454 32 484 7.61e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200090 AT2G32440.2 46.352 466 242 5 23 483 24 486 5.32e-160 463
Msa1200090 AT2G32440.1 46.352 466 242 5 23 483 24 486 5.32e-160 463
Msa1200090 AT1G05160.2 46.058 482 250 7 6 481 10 487 1.18e-158 459
Msa1200090 AT1G05160.1 46.058 482 250 7 6 481 10 487 1.18e-158 459
Msa1200090 AT3G19270.2 32.731 443 277 11 43 479 34 461 4.10e-71 234
Msa1200090 AT3G19270.1 33.095 420 260 11 43 456 34 438 4.77e-69 228
Msa1200090 AT5G36110.1 33.485 439 275 9 43 471 34 465 8.13e-67 223
Msa1200090 AT2G29090.2 32.735 446 278 12 43 481 49 479 9.07e-67 223
Msa1200090 AT2G29090.1 32.735 446 278 12 43 481 49 479 9.07e-67 223
Msa1200090 AT4G19230.1 32.280 443 269 15 42 476 35 454 1.24e-64 216
Msa1200090 AT4G19230.2 33.099 426 254 15 42 459 35 437 1.77e-64 217
Msa1200090 AT5G05690.1 33.643 431 247 15 43 455 31 440 1.91e-61 208
Msa1200090 AT5G45340.1 30.612 441 279 14 42 476 35 454 6.45e-61 207
Msa1200090 AT3G13730.2 30.189 424 281 8 40 455 48 464 1.02e-59 203
Msa1200090 AT3G13730.1 30.118 425 282 8 40 456 48 465 1.49e-59 204
Msa1200090 AT4G36380.1 30.896 424 277 10 43 456 69 486 2.12e-59 204
Msa1200090 AT5G45340.2 31.116 421 263 14 42 456 35 434 9.12e-59 201
Msa1200090 AT1G12740.1 31.222 442 279 12 30 459 18 446 3.85e-58 199
Msa1200090 AT1G12740.4 31.250 448 277 13 30 459 18 452 1.45e-56 196
Msa1200090 AT2G29090.3 32.316 393 250 10 96 481 1 384 1.99e-56 192
Msa1200090 AT1G73340.1 30.909 440 267 14 37 459 37 456 6.52e-56 194
Msa1200090 AT1G12740.2 30.804 448 279 14 30 459 18 452 6.84e-56 194
Msa1200090 AT1G55940.2 28.228 457 297 13 23 460 25 469 4.13e-52 184
Msa1200090 AT5G38970.1 26.667 435 292 11 35 460 26 442 1.92e-51 181
Msa1200090 AT3G50660.1 28.661 478 280 17 37 467 33 496 1.98e-51 182
Msa1200090 AT1G19630.3 27.252 433 300 12 34 459 25 449 5.79e-51 180
Msa1200090 AT1G55940.1 27.938 451 294 13 23 454 25 463 1.02e-50 179
Msa1200090 AT1G19630.1 26.959 434 302 12 34 460 25 450 3.16e-50 178
Msa1200090 AT3G30180.1 28.837 430 283 13 35 457 26 439 5.43e-50 177
Msa1200090 AT3G44970.1 28.261 460 306 11 23 470 15 462 8.33e-49 175
Msa1200090 AT5G05690.2 32.732 388 225 14 43 415 31 397 3.18e-48 171
Msa1200090 AT5G14400.3 30.144 418 254 12 48 456 1 389 1.01e-47 169
Msa1200090 AT5G14400.2 29.371 429 265 12 48 467 1 400 2.85e-47 169
Msa1200090 AT5G05690.3 36.513 304 172 10 163 456 30 322 3.12e-47 167
Msa1200090 AT1G78490.1 26.398 447 312 8 23 460 15 453 3.12e-46 168
Msa1200090 AT1G65670.1 27.563 439 288 11 23 450 15 434 1.49e-45 166
Msa1200090 AT4G15300.3 27.378 431 287 11 30 449 12 427 4.18e-45 164
Msa1200090 AT4G15300.2 27.378 431 287 11 30 449 22 437 5.72e-45 164
Msa1200090 AT2G42850.1 28.571 455 295 16 43 485 45 481 7.96e-45 164
Msa1200090 AT5G36110.2 32.676 355 225 8 43 390 34 381 1.08e-42 156
Msa1200090 AT5G48000.2 27.056 462 306 13 30 473 22 470 4.72e-41 154
Msa1200090 AT5G48000.4 27.056 462 306 13 30 473 22 470 4.72e-41 154
Msa1200090 AT5G48000.7 27.056 462 306 13 30 473 22 470 4.72e-41 154
Msa1200090 AT5G48000.6 27.056 462 306 13 30 473 22 470 4.72e-41 154
Msa1200090 AT5G48000.5 27.056 462 306 13 30 473 22 470 4.72e-41 154
Msa1200090 AT5G48000.3 27.056 462 306 13 30 473 22 470 4.72e-41 154
Msa1200090 AT5G48000.1 27.056 462 306 13 30 473 63 511 6.35e-41 154
Msa1200090 AT5G38970.3 25.840 387 261 10 35 413 26 394 1.18e-40 151
Msa1200090 AT4G15300.1 25.942 451 290 12 30 449 12 449 1.52e-39 149
Msa1200090 AT3G50660.2 28.365 416 249 16 37 417 33 434 9.33e-39 146
Msa1200090 AT5G14400.1 30.028 363 219 10 113 467 11 346 1.68e-38 144
Msa1200090 AT5G38970.2 26.062 353 242 8 116 460 20 361 2.15e-38 144
Msa1200090 AT5G38970.4 26.062 353 242 8 116 460 20 361 2.15e-38 144
Msa1200090 AT1G19630.2 25.765 392 277 11 34 418 25 409 4.20e-38 144
Msa1200090 AT4G15396.3 24.654 434 305 11 32 456 24 444 1.54e-37 143
Msa1200090 AT4G15393.2 24.348 460 314 12 1 450 2 437 3.81e-37 142
Msa1200090 AT4G15396.1 24.533 428 302 10 32 450 24 439 4.55e-37 142
Msa1200090 AT5G36140.1 31.469 286 185 6 43 324 33 311 3.39e-36 137
Msa1200090 AT1G12740.3 29.167 360 232 11 30 379 18 364 1.38e-33 130
Msa1200090 AT1G78490.2 25.815 399 279 9 23 413 15 404 2.12e-33 131
Msa1200090 AT4G36380.2 27.378 347 239 9 43 382 69 409 1.30e-31 126
Msa1200090 AT4G15310.1 27.069 447 286 15 23 450 16 441 2.09e-30 124
Msa1200090 AT5G67310.1 28.184 479 256 22 32 460 32 472 3.24e-30 123
Msa1200090 AT5G35715.1 27.415 383 236 11 93 439 9 385 6.45e-30 122
Msa1200090 AT3G53300.1 26.742 445 262 18 37 439 25 447 7.82e-30 122
Msa1200090 AT4G15396.2 22.951 427 289 10 32 450 24 418 1.96e-29 120
Msa1200090 AT2G45550.1 24.619 459 294 14 39 460 34 477 3.11e-28 117
Msa1200090 AT3G53280.1 27.209 430 260 17 43 435 28 441 3.68e-28 117
Msa1200090 AT3G30290.1 24.672 381 255 10 85 450 5 368 4.23e-28 116
Msa1200090 AT2G42850.2 28.212 358 231 14 43 388 45 388 4.32e-28 115
Msa1200090 AT3G26170.1 25.988 481 275 18 1 435 1 446 5.45e-28 117
Msa1200090 AT3G26280.1 26.351 444 273 16 35 439 24 452 7.08e-28 117
Msa1200090 AT3G26280.2 26.351 444 273 16 35 439 41 469 9.56e-28 116
Msa1200090 AT3G26270.1 25.793 473 280 19 32 456 21 470 3.12e-27 115
Msa1200090 AT4G15396.4 23.196 388 280 9 32 413 24 399 9.74e-27 112
Msa1200090 AT2G45560.1 25.636 472 291 20 35 466 30 481 1.03e-26 113
Msa1200090 AT3G26290.1 26.593 455 282 17 34 450 21 461 1.13e-26 113
Msa1200090 AT3G26290.2 26.593 455 282 17 34 450 34 474 1.50e-26 113
Msa1200090 AT1G33720.1 25.390 449 285 14 44 457 39 472 2.11e-26 112
Msa1200090 AT3G26300.1 25.270 463 287 16 29 450 17 461 3.76e-26 111
Msa1200090 AT3G26180.1 26.424 439 255 16 43 435 30 446 6.08e-26 111
Msa1200090 AT4G15393.1 22.857 420 293 11 1 413 2 397 7.36e-26 109
Msa1200090 AT3G26160.1 25.893 448 262 17 35 435 22 446 8.13e-26 110
Msa1200090 AT4G37430.1 24.017 458 286 16 43 459 28 464 1.85e-25 109
Msa1200090 AT3G26310.1 26.966 445 273 17 42 450 32 460 2.36e-25 109
Msa1200090 AT4G12300.1 24.063 507 309 23 28 478 28 514 2.77e-25 109
Msa1200090 AT5G57220.1 25.053 471 288 18 27 460 14 456 3.67e-25 108
Msa1200090 AT3G26200.1 24.771 436 281 13 35 435 20 443 5.16e-25 108
Msa1200090 AT5G25120.1 26.338 467 278 18 37 464 23 462 7.49e-25 107
Msa1200090 AT3G26150.1 25.934 455 261 18 35 439 22 450 8.56e-25 107
Msa1200090 AT4G12320.1 24.462 511 304 25 28 478 28 516 1.38e-24 107
Msa1200090 AT5G36130.1 37.143 140 86 2 348 485 1 140 1.53e-24 99.4
Msa1200090 AT4G37400.1 24.427 393 266 12 94 460 75 462 1.89e-24 106
Msa1200090 AT3G26330.1 25.450 444 280 17 44 450 32 461 2.48e-24 106
Msa1200090 AT4G37410.1 27.295 403 246 17 94 462 75 464 2.54e-24 106
Msa1200090 AT1G13110.1 25.223 448 273 19 35 439 24 452 3.58e-24 105
Msa1200090 AT5G14400.4 27.485 342 226 12 48 379 1 330 7.71e-24 102
Msa1200090 AT1G33730.1 29.054 296 177 8 184 457 52 336 8.08e-24 103
Msa1200090 AT1G33730.2 29.054 296 177 8 184 457 52 336 8.08e-24 103
Msa1200090 AT5G04330.1 24.283 453 282 16 42 451 31 465 1.01e-23 104
Msa1200090 AT1G11610.1 26.959 434 259 22 43 439 33 445 1.14e-23 104
Msa1200090 AT1G11610.2 26.959 434 259 22 43 439 33 445 1.19e-23 104
Msa1200090 AT1G50520.1 25.871 402 234 17 88 441 80 465 1.59e-23 103
Msa1200090 AT3G26190.1 25.000 432 269 15 43 435 28 443 2.39e-23 103
Msa1200090 AT4G37340.1 25.945 397 248 16 96 460 79 461 2.76e-23 103
Msa1200090 AT2G29090.4 28.070 285 185 10 43 321 49 319 2.82e-23 101
Msa1200090 AT5G06900.1 24.306 432 273 18 42 438 33 445 3.61e-23 102
Msa1200090 AT3G28740.1 30.000 230 151 5 238 462 247 471 5.08e-23 102
Msa1200090 AT1G13080.1 26.077 441 261 18 43 439 31 450 5.31e-23 102
Msa1200090 AT3G26180.2 33.173 208 123 5 238 435 111 312 5.78e-23 100
Msa1200090 AT5G04630.1 23.644 461 305 17 43 467 38 487 6.81e-23 102
Msa1200090 AT4G13770.1 31.455 213 133 6 262 464 264 473 1.37e-22 101
Msa1200090 AT1G13090.2 26.606 436 256 20 43 435 28 442 1.41e-22 100
Msa1200090 AT3G26320.1 23.965 459 292 15 32 450 20 461 1.85e-22 100
Msa1200090 AT2G26710.1 25.915 355 220 10 130 456 147 486 2.32e-22 100
Msa1200090 AT2G28850.1 24.359 468 314 18 34 477 30 481 4.36e-22 99.4
Msa1200090 AT3G26210.1 27.184 309 190 11 154 435 145 445 5.08e-22 99.4
Msa1200090 AT3G26230.1 27.137 468 267 21 35 450 18 463 6.17e-22 99.0
Msa1200090 AT3G10560.1 22.052 458 312 18 43 467 46 491 9.19e-22 98.6
Msa1200090 AT5G07990.1 25.052 479 279 20 37 464 27 476 1.30e-21 98.2
Msa1200090 AT1G13080.2 27.019 322 187 11 152 439 25 332 2.27e-21 96.3
Msa1200090 AT5G06905.1 23.684 456 287 19 43 451 31 472 2.37e-21 97.4
Msa1200090 AT2G45580.2 26.937 271 166 5 232 474 90 356 3.51e-21 95.5
Msa1200090 AT4G13310.1 28.539 438 249 20 39 435 28 442 3.54e-21 96.7
Msa1200090 AT2G45580.1 25.255 392 237 11 131 474 127 510 3.92e-21 96.7
Msa1200090 AT4G22710.1 24.499 449 282 16 75 475 81 520 5.05e-21 96.7
Msa1200090 AT2G45570.1 24.499 449 270 18 52 454 47 472 5.27e-21 96.3
Msa1200090 AT2G34490.1 25.203 369 249 12 129 477 124 485 5.74e-21 96.3
Msa1200090 AT1G33720.4 25.816 337 220 9 143 457 12 340 5.91e-21 95.1
Msa1200090 AT1G33720.3 25.816 337 220 9 143 457 12 340 5.91e-21 95.1
Msa1200090 AT1G33720.5 25.816 337 220 9 143 457 12 340 5.91e-21 95.1
Msa1200090 AT3G20940.1 22.609 460 299 18 28 447 27 469 7.11e-21 95.9
Msa1200090 AT5G25130.1 26.124 467 281 16 36 464 22 462 7.57e-21 95.9
Msa1200090 AT5G57260.1 27.171 449 270 18 44 450 31 464 9.34e-21 95.5
Msa1200090 AT1G66540.1 26.452 310 184 10 176 460 58 348 9.77e-21 94.4
Msa1200090 AT3G20950.1 22.838 451 296 17 28 439 27 464 9.78e-21 95.5
Msa1200090 AT5G36220.1 24.348 460 295 18 36 460 26 467 9.87e-21 95.5
Msa1200090 AT1G50560.1 28.926 242 146 9 234 460 254 484 1.12e-20 95.5
Msa1200090 AT2G23220.1 24.936 393 258 13 94 459 93 475 1.19e-20 95.5
Msa1200090 AT4G37320.1 27.876 226 151 4 239 462 248 463 1.24e-20 95.1
Msa1200090 AT1G66540.2 26.316 304 180 10 182 460 5 289 1.35e-20 93.2
Msa1200090 AT3G44250.1 26.545 437 255 16 43 435 28 442 1.42e-20 95.1
Msa1200090 AT2G30770.1 27.189 434 258 21 43 439 33 445 1.68e-20 94.7
Msa1200090 AT4G22690.1 24.834 451 278 19 75 475 112 551 1.75e-20 95.1
Msa1200090 AT4G37370.1 26.772 254 168 6 235 480 243 486 2.16e-20 94.4
Msa1200090 AT5G25140.1 24.839 467 285 14 37 464 23 462 2.27e-20 94.4
Msa1200090 AT3G48280.1 24.569 464 295 15 27 457 14 455 2.60e-20 94.0
Msa1200090 AT4G15393.3 21.343 417 270 11 1 413 2 364 4.75e-20 92.0
Msa1200090 AT5G36220.2 26.087 253 174 5 211 460 79 321 5.74e-20 91.7
Msa1200090 AT2G23190.1 29.060 234 153 5 230 460 282 505 6.25e-20 93.2
Msa1200090 AT4G31940.1 29.412 221 135 6 247 450 268 484 6.71e-20 93.2
Msa1200090 AT1G31800.1 31.132 212 127 7 261 464 346 546 7.30e-20 93.2
Msa1200090 AT3G61040.1 29.185 233 150 5 239 464 246 470 9.01e-20 92.4
Msa1200090 AT3G48300.1 23.947 451 286 20 42 460 31 456 1.06e-19 92.0
Msa1200090 AT4G37310.1 26.724 232 160 5 232 457 243 470 1.06e-19 92.4
Msa1200090 AT3G48300.2 23.947 451 286 20 42 460 33 458 1.07e-19 92.0
Msa1200090 AT4G36220.1 30.337 178 114 3 280 451 303 476 1.18e-19 92.4
Msa1200090 AT3G20110.1 24.894 470 291 18 16 447 9 454 1.35e-19 92.0
Msa1200090 AT3G26830.1 23.465 456 291 19 36 453 21 456 1.47e-19 91.7
Msa1200090 AT5G47990.1 24.795 488 273 22 50 472 49 507 1.69e-19 91.7
Msa1200090 AT5G25180.1 25.109 458 284 18 37 457 23 458 2.57e-19 91.3
Msa1200090 AT2G30750.1 34.409 186 110 5 263 439 263 445 3.61e-19 90.5
Msa1200090 AT2G42250.1 30.233 215 127 7 263 460 275 483 4.00e-19 90.5
Msa1200090 AT5G42590.1 25.161 465 283 20 31 454 20 460 4.17e-19 90.5
Msa1200090 AT3G48270.1 24.318 440 280 18 42 451 33 449 4.83e-19 90.1
Msa1200090 AT5G44620.1 21.847 444 282 18 52 450 55 478 5.09e-19 90.5
Msa1200090 AT4G31950.1 28.512 242 151 8 235 458 243 480 6.17e-19 90.1
Msa1200090 AT4G37330.1 28.899 218 143 4 244 459 250 457 1.11e-18 89.0
Msa1200090 AT3G48320.1 25.319 470 271 22 34 457 21 456 1.17e-18 89.0
Msa1200090 AT1G13100.1 26.625 323 193 12 160 452 146 454 1.51e-18 88.6
Msa1200090 AT3G26220.1 30.242 248 151 8 203 435 207 447 1.86e-18 88.6
Msa1200090 AT4G31500.1 23.517 472 287 17 38 462 24 468 4.21e-18 87.4
Msa1200090 AT2G22330.1 27.451 255 166 8 247 490 288 534 6.61e-18 87.0
Msa1200090 AT2G22330.2 27.451 255 166 8 247 490 311 557 8.15e-18 86.7
Msa1200090 AT4G37360.1 27.632 228 154 4 235 460 243 461 8.95e-18 86.3
Msa1200090 AT4G31970.1 26.991 226 148 5 247 459 267 488 1.02e-17 86.3
Msa1200090 AT2G40890.1 23.800 500 290 22 3 451 1 460 1.13e-17 86.3
Msa1200090 AT5G24950.1 23.649 444 286 17 43 451 32 457 1.17e-17 85.9
Msa1200090 AT3G26125.1 23.541 497 316 18 35 480 39 522 1.95e-17 85.5
Msa1200090 AT5G04660.1 25.490 255 169 8 217 455 229 478 3.99e-17 84.3
Msa1200090 AT1G64940.1 28.814 236 146 8 240 460 253 481 4.84e-17 84.3
Msa1200090 AT3G20120.4 23.762 404 250 17 78 439 72 459 5.53e-17 84.0
Msa1200090 AT1G11680.1 26.459 257 164 8 217 461 218 461 5.76e-17 84.0
Msa1200090 AT4G39950.1 26.482 253 171 6 247 490 286 532 5.90e-17 84.0
Msa1200090 AT5G52400.1 30.000 230 142 10 228 447 261 481 5.98e-17 84.0
Msa1200090 AT2G24180.1 31.222 221 128 10 245 450 256 467 7.58e-17 83.6
Msa1200090 AT4G39950.2 26.482 253 171 6 247 490 326 572 7.98e-17 83.6
Msa1200090 AT3G25180.1 26.210 248 159 8 228 460 241 479 9.40e-17 83.2
Msa1200090 AT1G16400.1 22.065 494 329 16 13 458 14 499 1.63e-16 82.8
Msa1200090 AT3G10570.1 24.715 263 178 9 220 467 234 491 1.78e-16 82.4
Msa1200090 AT2G27010.1 22.660 406 263 15 88 460 74 461 2.36e-16 82.0
Msa1200090 AT4G12310.1 22.500 480 301 21 52 476 53 516 3.50e-16 81.6
Msa1200090 AT3G48310.1 28.704 216 136 7 262 468 256 462 3.53e-16 81.3
Msa1200090 AT1G33720.2 24.590 366 213 12 143 457 12 365 3.75e-16 80.9
Msa1200090 AT3G03470.1 22.707 458 303 15 41 457 29 476 4.15e-16 81.3
Msa1200090 AT2G14100.1 27.523 218 141 6 232 439 249 459 4.16e-16 81.3
Msa1200090 AT2G25160.1 27.660 235 148 7 235 452 252 481 4.22e-16 81.3
Msa1200090 AT1G13140.1 23.093 472 312 17 46 474 45 508 5.56e-16 80.9
Msa1200090 AT5G05260.2 22.661 481 294 19 43 471 40 494 6.39e-16 80.9
Msa1200090 AT1G74550.1 25.962 208 142 4 261 462 253 454 7.01e-16 80.5
Msa1200090 AT3G14640.2 24.907 269 176 11 219 472 261 518 7.04e-16 80.5
Msa1200090 AT3G14640.1 25.197 254 169 9 219 457 239 486 7.21e-16 80.5
Msa1200090 AT3G20120.2 28.302 212 129 7 242 439 121 323 9.54e-16 79.3
Msa1200090 AT3G20120.3 28.302 212 129 7 242 439 121 323 9.54e-16 79.3
Msa1200090 AT3G20120.1 28.302 212 129 7 242 439 121 323 9.54e-16 79.3
Msa1200090 AT4G15350.1 23.192 401 257 17 78 439 66 454 9.71e-16 80.1
Msa1200090 AT1G64950.1 28.270 237 146 8 240 460 252 480 1.43e-15 79.7
Msa1200090 AT4G15360.1 22.989 435 284 17 43 441 40 459 1.62e-15 79.3
Msa1200090 AT1G13150.1 23.173 479 315 19 46 480 38 507 1.90e-15 79.3
Msa1200090 AT1G75130.1 22.967 418 296 13 64 461 67 478 2.03e-15 79.0
Msa1200090 AT1G74110.1 22.669 472 290 19 38 456 58 507 2.32e-15 79.0
Msa1200090 AT3G20140.1 22.172 442 288 16 35 439 34 456 2.52e-15 79.0
Msa1200090 AT1G28430.1 27.753 227 145 6 222 435 234 454 3.51e-15 78.6
Msa1200090 AT3G53130.1 21.446 401 270 13 95 459 122 513 3.82e-15 78.2
Msa1200090 AT5G23190.1 27.152 302 188 10 195 466 227 526 4.59e-15 78.2
Msa1200090 AT2G12190.1 28.452 239 145 8 240 460 252 482 5.49e-15 77.8
Msa1200090 AT4G20240.1 25.564 399 250 13 43 412 33 413 5.55e-15 77.4
Msa1200090 AT2G26170.1 27.823 248 153 7 224 457 256 491 5.68e-15 77.8
Msa1200090 AT1G13710.1 22.267 494 311 18 43 489 35 502 6.52e-15 77.4
Msa1200090 AT5G24960.1 23.214 448 297 20 43 457 33 466 6.64e-15 77.4
Msa1200090 AT3G14620.1 28.632 234 148 9 231 457 266 487 8.03e-15 77.4
Msa1200090 AT3G44970.2 23.099 355 251 9 23 366 15 358 9.38e-15 76.3
Msa1200090 AT2G26170.2 28.629 248 149 8 224 456 173 407 9.54e-15 76.6
Msa1200090 AT3G61880.1 27.700 213 135 6 261 462 297 501 1.04e-14 77.0
Msa1200090 AT1G74540.1 27.638 199 132 5 259 451 257 449 1.16e-14 76.6
Msa1200090 AT4G12330.1 24.891 229 156 7 232 450 255 477 1.23e-14 76.6
Msa1200090 AT3G14680.1 21.353 473 312 18 29 457 28 484 1.48e-14 76.3
Msa1200090 AT3G61880.2 27.830 212 134 6 261 461 297 500 1.73e-14 76.3
Msa1200090 AT1G01190.2 24.419 258 157 9 243 488 294 525 1.74e-14 76.3
Msa1200090 AT1G64930.1 28.922 204 130 7 266 460 284 481 2.11e-14 75.9
Msa1200090 AT1G01190.1 24.419 258 157 9 243 488 289 520 2.15e-14 75.9
Msa1200090 AT4G15380.1 21.882 457 292 17 78 483 73 515 3.16e-14 75.5
Msa1200090 AT3G32047.1 23.956 455 281 20 50 460 49 482 3.18e-14 75.5
Msa1200090 AT4G15110.1 22.865 363 208 10 155 457 199 549 3.36e-14 75.5
Msa1200090 AT2G21910.1 28.708 209 134 6 258 454 270 475 3.88e-14 75.1
Msa1200090 AT5G10600.1 24.786 234 162 6 231 459 254 478 6.34e-14 74.3
Msa1200090 AT3G14630.1 25.439 228 156 6 238 457 259 480 9.03e-14 73.9
Msa1200090 AT3G14630.2 25.439 228 156 6 238 457 314 535 1.41e-13 73.6
Msa1200090 AT3G20080.2 22.336 488 305 22 41 472 40 509 1.41e-13 73.6
Msa1200090 AT3G20080.1 22.336 488 305 22 41 472 40 509 1.41e-13 73.6
Msa1200090 AT2G46660.1 27.230 213 132 7 239 439 279 480 1.90e-13 73.2
Msa1200090 AT2G30490.1 25.121 414 236 20 95 456 79 470 2.10e-13 72.8
Msa1200090 AT5G10610.1 23.723 274 187 9 199 459 198 462 3.06e-13 72.4
Msa1200090 AT5G52320.1 26.531 245 155 9 242 471 251 485 3.30e-13 72.0
Msa1200090 AT4G13310.2 27.461 386 221 18 39 388 28 390 3.99e-13 71.2
Msa1200090 AT4G20240.2 26.203 374 230 13 43 388 33 388 4.01e-13 71.2
Msa1200090 AT5G52320.2 26.531 245 155 9 242 471 251 485 4.17e-13 72.0
Msa1200090 AT4G15330.1 23.183 509 315 19 26 478 21 509 4.33e-13 72.0
Msa1200090 AT3G20100.1 22.843 394 249 16 88 439 80 460 5.35e-13 71.6
Msa1200090 AT3G52970.1 29.630 243 136 8 261 471 273 512 1.34e-12 70.5
Msa1200090 AT3G52970.2 29.630 243 136 8 261 471 287 526 1.51e-12 70.1
Msa1200090 AT4G15330.2 26.772 254 146 10 259 478 234 481 2.14e-12 69.7
Msa1200090 AT3G20080.4 25.833 240 137 10 265 472 142 372 4.00e-12 68.2
Msa1200090 AT3G20080.5 25.833 240 137 10 265 472 142 372 4.00e-12 68.2
Msa1200090 AT3G20080.6 25.833 240 137 10 265 472 142 372 4.00e-12 68.2
Msa1200090 AT3G20080.3 25.833 240 137 10 265 472 142 372 4.00e-12 68.2
Msa1200090 AT4G39490.1 22.284 359 238 10 138 457 132 488 6.06e-12 68.2
Msa1200090 AT5G08250.1 26.122 245 158 5 245 466 220 464 7.54e-12 67.8
Msa1200090 AT5G08250.2 26.122 245 158 5 245 466 282 526 9.25e-12 67.8
Msa1200090 AT5G24910.1 26.190 210 135 7 261 456 300 503 1.21e-11 67.4
Msa1200090 AT1G67110.1 24.548 387 258 13 93 456 106 481 1.51e-11 67.0
Msa1200090 AT1G64900.1 27.234 235 150 7 240 460 249 476 1.78e-11 66.6
Msa1200090 AT1G65340.1 23.913 276 176 10 205 454 205 472 1.78e-11 66.6
Msa1200090 AT5G38450.1 24.365 394 257 14 93 456 105 487 2.41e-11 66.2
Msa1200090 AT2G27690.1 26.906 223 144 6 263 474 266 480 3.05e-11 65.9
Msa1200090 AT2G23180.1 22.093 344 232 11 150 459 145 486 5.43e-11 65.1
Msa1200090 AT4G39510.1 26.794 209 139 5 262 459 274 479 8.83e-11 64.7

Find 91 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTTACATTCCATCTTTC+TGG 0.078540 8_1:-52402820 None:intergenic
ACTAGCTTAGTGATCGATTT+TGG 0.175863 8_1:-52399951 None:intergenic
GGATTAAATTCTTCCGGATT+TGG 0.214998 8_1:-52402799 None:intergenic
TCTAACATGCATAAATAAAA+TGG 0.215449 8_1:+52403468 Msa1200090:three_prime_UTR
TGTACATAACTAATGTATTT+TGG 0.219074 8_1:-52400040 None:intergenic
ACAATACTTACTTGTAATTA+AGG 0.221344 8_1:-52403165 None:intergenic
AGCAAAACCAGGTGCCTTTA+TGG 0.221809 8_1:-52400264 None:intergenic
AAATGGAAATACATTGGATT+TGG 0.256548 8_1:+52399333 None:intergenic
GACATGGGATGGCCTATTAT+TGG 0.274318 8_1:+52399473 Msa1200090:CDS
AGATGAAAAGTGTTTGAAAA+AGG 0.282931 8_1:-52399507 None:intergenic
ATGTAAGTAAGAGGACATTT+TGG 0.296841 8_1:-52403337 None:intergenic
AAACATTCTTCATCTCATTA+AGG 0.297114 8_1:-52400133 None:intergenic
CCGGTCATCGTCAATAAATT+TGG 0.306182 8_1:+52400197 Msa1200090:CDS
CTTTCTGGATTAAATTCTTC+CGG 0.306481 8_1:-52402805 None:intergenic
AGACAGTTGTCTGTTGGTTT+AGG 0.309282 8_1:-52403367 None:intergenic
TGGAGATTCATTTAACGTTA+TGG 0.314929 8_1:+52400217 Msa1200090:CDS
AGTAGCACTTTCCATCCTTT+TGG 0.324988 8_1:-52402739 None:intergenic
AATCGATCACTAAGCTAGTA+TGG 0.334069 8_1:+52399955 Msa1200090:CDS
ACATTTCTTCCCTTTGGAAT+AGG 0.342723 8_1:+52403076 Msa1200090:CDS
GGAAGAAATGTTCCTGTTGT+AGG 0.356448 8_1:-52403064 None:intergenic
ACAGGAACATTTCTTCCCTT+TGG 0.369888 8_1:+52403070 Msa1200090:CDS
ATCTCATTAAGGAACTCAAC+AGG 0.376829 8_1:-52400122 None:intergenic
CTGATAGCGCTATTGCTTAG+TGG 0.378215 8_1:+52400567 Msa1200090:CDS
TTGTCTGTTGGTTTAGGAAC+TGG 0.386955 8_1:-52403361 None:intergenic
CTATGCAACTGATAGAAGTT+TGG 0.395329 8_1:+52403732 Msa1200090:three_prime_UTR
GATGAAATGGTGTAGAAATA+TGG 0.398494 8_1:-52403143 None:intergenic
GCAAAACCAGGTGCCTTTAT+GGG 0.400526 8_1:-52400263 None:intergenic
ACATGGGATGGCCTATTATT+GGG 0.401969 8_1:+52399474 Msa1200090:CDS
ACTTGTAATTAAGGATGAAA+TGG 0.408580 8_1:-52403156 None:intergenic
ATGTCATTGACAAATTCATC+AGG 0.411182 8_1:-52399536 None:intergenic
GGCCACATGTTCCCAATAAT+AGG 0.413146 8_1:-52399485 None:intergenic
TCCGGATTTGGATGATGCTC+AGG 0.425004 8_1:-52402787 None:intergenic
TTTGGAAATAAACGACGAAA+AGG 0.428658 8_1:+52400509 Msa1200090:CDS
AAGCTGAAAAGATACTGATA+TGG 0.446326 8_1:-52402580 None:intergenic
ATGTACAAGACACACTTGTA+TGG 0.448031 8_1:+52399849 Msa1200090:CDS
AAATATGGTCATTTCAAGTC+TGG 0.455910 8_1:-52403128 None:intergenic
TCATTTAACGTTATGGCTGC+GGG 0.457033 8_1:+52400224 Msa1200090:CDS
AAGGATGGAAAGTGCTACTT+TGG 0.461915 8_1:+52402743 Msa1200090:CDS
TTAGGTTATTTCATACCAAA+AGG 0.463337 8_1:+52402724 Msa1200090:intron
TTGGCTAAGAGCGGTTCATA+TGG 0.466054 8_1:+52402762 Msa1200090:CDS
CCCATGTCACCAGGAGGTAG+TGG 0.466764 8_1:-52399458 None:intergenic
CCAAATTTATTGACGATGAC+CGG 0.477081 8_1:-52400197 None:intergenic
AATACCTATGTTCACCACTT+AGG 0.479455 8_1:-52399986 None:intergenic
GTTATTTCATACCAAAAGGA+TGG 0.482217 8_1:+52402728 Msa1200090:CDS
TAGGATTACAATCCTACAAC+AGG 0.482292 8_1:+52403052 Msa1200090:intron
TCCACTACCTCCTGGTGACA+TGG 0.483202 8_1:+52399457 Msa1200090:CDS
AGTCTGGCTAGGTCACTTCC+TGG 0.485183 8_1:-52403112 None:intergenic
TACCTCCTGGTGACATGGGA+TGG 0.489770 8_1:+52399462 Msa1200090:CDS
TCCTGAGCATCATCCAAATC+CGG 0.493825 8_1:+52402786 Msa1200090:CDS
TACAATCTATTGTTGATGAA+AGG 0.498853 8_1:+52400430 Msa1200090:CDS
TGCTTTCAACAAAGCACTCA+AGG 0.500116 8_1:+52400283 Msa1200090:CDS
AAGAATTTAATCCAGAAAGA+TGG 0.500476 8_1:+52402809 Msa1200090:CDS
TGTTTCAGATATGGACAAAC+CGG 0.501316 8_1:+52399825 Msa1200090:intron
GACAAATGATGTGAACTTTG+AGG 0.513949 8_1:+52399920 Msa1200090:CDS
TTCATTTAACGTTATGGCTG+CGG 0.514995 8_1:+52400223 Msa1200090:CDS
TCTTAAATTGTGATTCATTG+AGG 0.515408 8_1:+52403417 Msa1200090:exon
TGTGAGATTTATTTATCAAG+TGG 0.515751 8_1:+52403561 Msa1200090:three_prime_UTR
GGAACTGGTATGTAAGTAAG+AGG 0.516228 8_1:-52403346 None:intergenic
TTGGAAATAAACGACGAAAA+GGG 0.523297 8_1:+52400510 Msa1200090:CDS
AACTTAGGCACGTAAGAAGT+TGG 0.524710 8_1:+52400398 Msa1200090:intron
GCAGAAGTGACTATGATGCT+TGG 0.539245 8_1:-52399876 None:intergenic
GCAACTGATGTGAACATCAA+TGG 0.539722 8_1:+52402614 Msa1200090:CDS
TTGGCTTTCTTCAAACAAAG+TGG 0.553244 8_1:-52400645 None:intergenic
GTGTCGCGAGCCTATTCCAA+AGG 0.566028 8_1:-52403086 None:intergenic
ATAGGCCATCCCATGTCACC+AGG 0.570615 8_1:-52399467 None:intergenic
TTTATGCCCATAAAGGCACC+TGG 0.571604 8_1:+52400257 Msa1200090:CDS
TTAGCGAGACAGTTGTCTGT+TGG 0.573999 8_1:-52403373 None:intergenic
CAAGTGTGTCTTGTACATAC+CGG 0.575822 8_1:-52399844 None:intergenic
TTCTGCTGCTATGTGCAAGA+AGG 0.579434 8_1:+52399893 Msa1200090:CDS
GATACCTAAGTGGTGAACAT+AGG 0.581047 8_1:+52399982 Msa1200090:CDS
TGGTCATTTCAAGTCTGGCT+AGG 0.583521 8_1:-52403123 None:intergenic
CCACTACCTCCTGGTGACAT+GGG 0.587904 8_1:+52399458 Msa1200090:CDS
GAATCACAATTTAAGATCAC+CGG 0.590438 8_1:-52403410 None:intergenic
GGCCTATTATTGGGAACATG+TGG 0.591942 8_1:+52399483 Msa1200090:CDS
AACAGACAACTGTCTCGCTA+AGG 0.597900 8_1:+52403375 Msa1200090:CDS
TGTCGCGAGCCTATTCCAAA+GGG 0.598285 8_1:-52403085 None:intergenic
TTGTGAGGAATTTGAATGTG+TGG 0.606895 8_1:+52399402 Msa1200090:CDS
GCTAAGGTTATAAAGCTCTC+CGG 0.610602 8_1:+52403391 Msa1200090:CDS
CTAGTCACTTCTCCTATCGT+TGG 0.613545 8_1:+52400017 Msa1200090:CDS
AAAGGACATCCACTACCTCC+TGG 0.616462 8_1:+52399449 Msa1200090:CDS
GCTTTGTTGAAAGCAAAACC+AGG 0.621354 8_1:-52400275 None:intergenic
ATTGTAGCATCCTAGCAAAG+TGG 0.639328 8_1:-52399366 None:intergenic
AGTGCTACTTTGGCTAAGAG+CGG 0.655169 8_1:+52402753 Msa1200090:CDS
AATGATGTGAACTTTGAGGA+CGG 0.655804 8_1:+52399924 Msa1200090:CDS
TCTCATTAAGGAACTCAACA+GGG 0.659553 8_1:-52400121 None:intergenic
CATTAGCAACTACTATGATG+TGG 0.659770 8_1:+52400598 Msa1200090:CDS
TGTCATTGACAAATTCATCA+GGG 0.660537 8_1:-52399535 None:intergenic
ACTTTGTTTGAAGAAAGCCA+AGG 0.670445 8_1:+52400647 Msa1200090:CDS
TATGTACATACAACGCATTG+AGG 0.680590 8_1:+52400055 Msa1200090:CDS
GTATGGACTAGATACCTAAG+TGG 0.682431 8_1:+52399972 Msa1200090:CDS
GGCCATCCCATGTCACCAGG+AGG 0.688276 8_1:-52399464 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGGTAATTTTTTAAAAATTA+AGG + chr8_1:52400933-52400952 Msa1200090:intron 10.0%
!!! GGTAATTTTTTAAAAATTAA+GGG + chr8_1:52400934-52400953 Msa1200090:intron 10.0%
!! ATTGTATTTATCATTTAATA+AGG - chr8_1:52401045-52401064 None:intergenic 10.0%
!!! ATAATCTTATTTTTTCTAAA+AGG - chr8_1:52401446-52401465 None:intergenic 10.0%
!! TTAGAAAAAATAAGATTATT+AGG + chr8_1:52401447-52401466 Msa1200090:intron 10.0%
!! AAAGAAAAAGTAAAAAAGTA+GGG - chr8_1:52399587-52399606 None:intergenic 15.0%
!! AAAAGAAAAAGTAAAAAAGT+AGG - chr8_1:52399588-52399607 None:intergenic 15.0%
!!! AATCTTTTTTCTATAATAGT+TGG + chr8_1:52399613-52399632 Msa1200090:intron 15.0%
!! TCTCAATAATAAAAAATAGT+AGG - chr8_1:52400680-52400699 None:intergenic 15.0%
!!! TTTGTTTTGATAATGTATTT+TGG + chr8_1:52400913-52400932 Msa1200090:intron 15.0%
!! CAATATATAGAAGAATATAA+AGG + chr8_1:52401061-52401080 Msa1200090:intron 15.0%
!!! TATTTTTTCTTTCTATGTAT+GGG - chr8_1:52401176-52401195 None:intergenic 15.0%
!!! TTATTTTTTCTTTCTATGTA+TGG - chr8_1:52401177-52401196 None:intergenic 15.0%
!!! TAATTTTAAATTTGCCATAT+TGG + chr8_1:52401544-52401563 Msa1200090:intron 15.0%
!! TAAAAAGTAAGATTGTAAAA+AGG + chr8_1:52401769-52401788 Msa1200090:intron 15.0%
!! AAAAAGTAAGATTGTAAAAA+GGG + chr8_1:52401770-52401789 Msa1200090:intron 15.0%
!!! TCATTTTCTAAATAATGTTA+TGG - chr8_1:52402114-52402133 None:intergenic 15.0%
!! TATTAAGGAAACTAAAAAAA+TGG + chr8_1:52402380-52402399 Msa1200090:CDS 15.0%
!! ATGAATTATATATAGACAAT+AGG - chr8_1:52402440-52402459 None:intergenic 15.0%
!!! TTATTTTCGGTTATTAAAAA+CGG + chr8_1:52402668-52402687 Msa1200090:intron 15.0%
!!! ATGTCTTTGTTAAATATTTT+AGG + chr8_1:52402706-52402725 Msa1200090:intron 15.0%
!! AACAAAAATAAGTTTAATGA+AGG - chr8_1:52402940-52402959 None:intergenic 15.0%
!!! CTAATTTATTTTTCTTTTCA+AGG + chr8_1:52403242-52403261 Msa1200090:intron 15.0%
!!! CTTTTTCTTCTTAATTTTAT+AGG + chr8_1:52403299-52403318 Msa1200090:intron 15.0%
!!! TGTACATAACTAATGTATTT+TGG - chr8_1:52400043-52400062 None:intergenic 20.0%
!!! AATGTGAAAGATGATTTTAA+AGG - chr8_1:52400159-52400178 None:intergenic 20.0%
!!! AATCATCTTTCACATTTTTT+TGG + chr8_1:52400163-52400182 Msa1200090:CDS 20.0%
!!! ATCATCTTTCACATTTTTTT+GGG + chr8_1:52400164-52400183 Msa1200090:CDS 20.0%
!! AAGAAGAATGAGAAAATAAA+AGG - chr8_1:52400331-52400350 None:intergenic 20.0%
!!! AGATCTTTTAGATATTCTTT+TGG + chr8_1:52400491-52400510 Msa1200090:CDS 20.0%
!!! ACTTTAAAGTATTTTTGCAT+GGG + chr8_1:52400823-52400842 Msa1200090:intron 20.0%
!!! TTTTGGTTAAAGATAAATCT+AGG + chr8_1:52400969-52400988 Msa1200090:intron 20.0%
!! TTTGGTTAAAGATAAATCTA+GGG + chr8_1:52400970-52400989 Msa1200090:intron 20.0%
!!! GAGAATTTGAAATTTCTTTT+TGG + chr8_1:52401019-52401038 Msa1200090:intron 20.0%
!!! TTATTTTGTGGTAAGAATTT+TGG - chr8_1:52401292-52401311 None:intergenic 20.0%
!!! AAGAGAAGAATATTTAACTT+TGG + chr8_1:52401320-52401339 Msa1200090:intron 20.0%
!!! AAAAAATCAGTAAACACTTT+TGG + chr8_1:52401614-52401633 Msa1200090:intron 20.0%
!!! GCAATAAATCACAAATTTTA+GGG - chr8_1:52401647-52401666 None:intergenic 20.0%
!!! AGCAATAAATCACAAATTTT+AGG - chr8_1:52401648-52401667 None:intergenic 20.0%
!!! TTGCTATAATTTTGAATATG+AGG + chr8_1:52401663-52401682 Msa1200090:intron 20.0%
!!! TTATTTTTGGGGAAAAAATA+TGG + chr8_1:52401739-52401758 Msa1200090:intron 20.0%
!!! TATTTTTGGGGAAAAAATAT+GGG + chr8_1:52401740-52401759 Msa1200090:intron 20.0%
!! TTAATTATTTAGCTACTCTT+AGG - chr8_1:52402188-52402207 None:intergenic 20.0%
!! ATACTTTACAAAATAGTTAG+AGG + chr8_1:52402260-52402279 Msa1200090:intron 20.0%
!!! ACTCTATTTCTTGTTATTTT+CGG + chr8_1:52402655-52402674 Msa1200090:intron 20.0%
!! AGTAATTGTTAAACTCAAAT+TGG - chr8_1:52402887-52402906 None:intergenic 20.0%
!! ACAATACTTACTTGTAATTA+AGG - chr8_1:52403168-52403187 None:intergenic 20.0%
!! TCTAACATGCATAAATAAAA+TGG + chr8_1:52403468-52403487 Msa1200090:three_prime_UTR 20.0%
!! CAATAGTAAAAAAATACTTG+TGG - chr8_1:52403505-52403524 None:intergenic 20.0%
!!! CACAAGTATTTTTTTACTAT+TGG + chr8_1:52403503-52403522 Msa1200090:three_prime_UTR 20.0%
!! GATTTTAAACTGAGAAAGAA+AGG + chr8_1:52399431-52399450 Msa1200090:CDS 25.0%
!!! GATGAAAAGTGTTTGAAAAA+GGG - chr8_1:52399509-52399528 None:intergenic 25.0%
!!! AGATGAAAAGTGTTTGAAAA+AGG - chr8_1:52399510-52399529 None:intergenic 25.0%
!!! TTTTTCAAACACTTTTCATC+TGG + chr8_1:52399509-52399528 Msa1200090:CDS 25.0%
! CATCAACAAGAAGTTAATAT+TGG - chr8_1:52399807-52399826 None:intergenic 25.0%
! AAACATTCTTCATCTCATTA+AGG - chr8_1:52400136-52400155 None:intergenic 25.0%
!! TACAATCTATTGTTGATGAA+AGG + chr8_1:52400430-52400449 Msa1200090:CDS 25.0%
! AAATAGTAGGTTATTTACCT+TGG - chr8_1:52400667-52400686 None:intergenic 25.0%
!!! GACTTTAAAGTATTTTTGCA+TGG + chr8_1:52400822-52400841 Msa1200090:intron 25.0%
!!! TGAGGTAATGTAGTTTTATA+TGG + chr8_1:52400855-52400874 Msa1200090:intron 25.0%
! TTAAAAATTAAGGGATGTCA+TGG + chr8_1:52400943-52400962 Msa1200090:intron 25.0%
! TAAAAATTAAGGGATGTCAT+GGG + chr8_1:52400944-52400963 Msa1200090:intron 25.0%
! ATTACACGTATGTTTATTTG+AGG + chr8_1:52401084-52401103 Msa1200090:intron 25.0%
!!! TCTTGAAAGATGTTATTTTG+TGG - chr8_1:52401304-52401323 None:intergenic 25.0%
!!! TATTTTTTCTAAAAGGTCCA+TGG - chr8_1:52401439-52401458 None:intergenic 25.0%
!! ATTATTAGGTGCCTTTTAAA+TGG + chr8_1:52401461-52401480 Msa1200090:intron 25.0%
!!! TGATACTTTTTTTGAATGTG+TGG - chr8_1:52401487-52401506 None:intergenic 25.0%
!! TTTTGACATTCAAATGTTGT+CGG - chr8_1:52401517-52401536 None:intergenic 25.0%
!!! GGAGAACATAAATTATTTTG+TGG + chr8_1:52401684-52401703 Msa1200090:intron 25.0%
!!! AGGCTAAACATCTTTATTTT+TGG + chr8_1:52401726-52401745 Msa1200090:intron 25.0%
!!! GGCTAAACATCTTTATTTTT+GGG + chr8_1:52401727-52401746 Msa1200090:intron 25.0%
!!! GCTAAACATCTTTATTTTTG+GGG + chr8_1:52401728-52401747 Msa1200090:intron 25.0%
!!! ATTTTAGAGTGCGTAATAAA+AGG + chr8_1:52401799-52401818 Msa1200090:intron 25.0%
!!! TTTTAGAGTGCGTAATAAAA+GGG + chr8_1:52401800-52401819 Msa1200090:intron 25.0%
! TAATAAAAGGGAACCAAAAA+TGG + chr8_1:52401812-52401831 Msa1200090:intron 25.0%
!!! GTTAGCTTTAATTCCATTTT+TGG - chr8_1:52401828-52401847 None:intergenic 25.0%
!!! TTCTAAAGTCAATACACTAT+GGG + chr8_1:52401848-52401867 Msa1200090:intron 25.0%
!! TGTTTTCCCCATTAAAAATT+AGG - chr8_1:52401884-52401903 None:intergenic 25.0%
! ATTGTTTATCAAGATCTTTC+AGG + chr8_1:52401954-52401973 Msa1200090:intron 25.0%
!! ATAGACTTTTGAATTCACAT+AGG + chr8_1:52402053-52402072 Msa1200090:intron 25.0%
!! TCCATATTCTAAAAAGAGTA+TGG + chr8_1:52402236-52402255 Msa1200090:intron 25.0%
!! GCAAAAACGATTTTGTATTA+AGG + chr8_1:52402365-52402384 Msa1200090:CDS 25.0%
! AAAAAATGGTATATCTCTCT+CGG + chr8_1:52402394-52402413 Msa1200090:CDS 25.0%
! GAAAATAACAAGAAATAGAG+TGG - chr8_1:52402656-52402675 None:intergenic 25.0%
!! TTAGGTTATTTCATACCAAA+AGG + chr8_1:52402724-52402743 Msa1200090:intron 25.0%
! AAGAATTTAATCCAGAAAGA+TGG + chr8_1:52402809-52402828 Msa1200090:CDS 25.0%
! TGAGTTTAACAATTACTAAG+AGG + chr8_1:52402890-52402909 Msa1200090:intron 25.0%
! TTGAGTTATTGTGTTAATTG+AGG + chr8_1:52403009-52403028 Msa1200090:intron 25.0%
! ACTTGTAATTAAGGATGAAA+TGG - chr8_1:52403159-52403178 None:intergenic 25.0%
! TCTTAAATTGTGATTCATTG+AGG + chr8_1:52403417-52403436 Msa1200090:exon 25.0%
! TGTGAGATTTATTTATCAAG+TGG + chr8_1:52403561-52403580 Msa1200090:three_prime_UTR 25.0%
!! GCTTTTTATAGATACAAACT+AGG - chr8_1:52403656-52403675 None:intergenic 25.0%
! ATTTTGCTGACAAAATTGTG+AGG + chr8_1:52399387-52399406 Msa1200090:CDS 30.0%
TGTCATTGACAAATTCATCA+GGG - chr8_1:52399538-52399557 None:intergenic 30.0%
ATGTCATTGACAAATTCATC+AGG - chr8_1:52399539-52399558 None:intergenic 30.0%
ACGAAGAAAGTAAATAGCAA+AGG - chr8_1:52399646-52399665 None:intergenic 30.0%
TCTTGTTGATGTTTCAGATA+TGG + chr8_1:52399816-52399835 Msa1200090:intron 30.0%
TGGAGATTCATTTAACGTTA+TGG + chr8_1:52400217-52400236 Msa1200090:CDS 30.0%
! ATTCTCTTTTATGCCCATAA+AGG + chr8_1:52400250-52400269 Msa1200090:CDS 30.0%
TCACTTTGTATACCTAACTT+AGG + chr8_1:52400383-52400402 Msa1200090:intron 30.0%
TTTGGAAATAAACGACGAAA+AGG + chr8_1:52400509-52400528 Msa1200090:CDS 30.0%
TTGGAAATAAACGACGAAAA+GGG + chr8_1:52400510-52400529 Msa1200090:CDS 30.0%
TTCCGTTACCCATTTATAAT+GGG + chr8_1:52401254-52401273 Msa1200090:intron 30.0%
! TGAAATCTCTGAAAAGTCAA+GGG - chr8_1:52401572-52401591 None:intergenic 30.0%
! TTGAAATCTCTGAAAAGTCA+AGG - chr8_1:52401573-52401592 None:intergenic 30.0%
! GTTAAAACTCACCATGTTTT+AGG + chr8_1:52401706-52401725 Msa1200090:intron 30.0%
AAGATGTTTAGCCTAAAACA+TGG - chr8_1:52401720-52401739 None:intergenic 30.0%
!! CTTCTAAAGTCAATACACTA+TGG + chr8_1:52401847-52401866 Msa1200090:intron 30.0%
! TCTAAAGTCAATACACTATG+GGG + chr8_1:52401849-52401868 Msa1200090:intron 30.0%
CATCAAAATTCAACGTGATA+AGG - chr8_1:52402003-52402022 None:intergenic 30.0%
TCTATACCTAACTGTACATA+TGG - chr8_1:52402038-52402057 None:intergenic 30.0%
!!! GCCATACTCTTTTTAGAATA+TGG - chr8_1:52402240-52402259 None:intergenic 30.0%
TAGTTAGAGGACAGTAAAAA+TGG + chr8_1:52402273-52402292 Msa1200090:intron 30.0%
!! AATACAAAATCGTTTTTGCG+AGG - chr8_1:52402364-52402383 None:intergenic 30.0%
AAAAATGGTATATCTCTCTC+GGG + chr8_1:52402395-52402414 Msa1200090:CDS 30.0%
AAGCTGAAAAGATACTGATA+TGG - chr8_1:52402583-52402602 None:intergenic 30.0%
! TCAGTATCTTTTCAGCTTTT+CGG + chr8_1:52402585-52402604 Msa1200090:CDS 30.0%
AATAACAAGAAATAGAGTGG+AGG - chr8_1:52402653-52402672 None:intergenic 30.0%
! GTTATTTCATACCAAAAGGA+TGG + chr8_1:52402728-52402747 Msa1200090:CDS 30.0%
CTTTCTGGATTAAATTCTTC+CGG - chr8_1:52402808-52402827 None:intergenic 30.0%
! ATGATGTTGATTATGTGCTT+AGG + chr8_1:52403033-52403052 Msa1200090:intron 30.0%
! AAATATGGTCATTTCAAGTC+TGG - chr8_1:52403131-52403150 None:intergenic 30.0%
GATGAAATGGTGTAGAAATA+TGG - chr8_1:52403146-52403165 None:intergenic 30.0%
! ATGTAAGTAAGAGGACATTT+TGG - chr8_1:52403340-52403359 None:intergenic 30.0%
! GAATCACAATTTAAGATCAC+CGG - chr8_1:52403413-52403432 None:intergenic 30.0%
!!! ATTTTTGTTGCCACTTTGCT+AGG + chr8_1:52399356-52399375 Msa1200090:CDS 35.0%
TTGTGAGGAATTTGAATGTG+TGG + chr8_1:52399402-52399421 Msa1200090:CDS 35.0%
TGTTTCAGATATGGACAAAC+CGG + chr8_1:52399825-52399844 Msa1200090:intron 35.0%
ATGTACAAGACACACTTGTA+TGG + chr8_1:52399849-52399868 Msa1200090:CDS 35.0%
GACAAATGATGTGAACTTTG+AGG + chr8_1:52399920-52399939 Msa1200090:CDS 35.0%
! AATGATGTGAACTTTGAGGA+CGG + chr8_1:52399924-52399943 Msa1200090:CDS 35.0%
!! ACTAGCTTAGTGATCGATTT+TGG - chr8_1:52399954-52399973 None:intergenic 35.0%
AATCGATCACTAAGCTAGTA+TGG + chr8_1:52399955-52399974 Msa1200090:CDS 35.0%
AATACCTATGTTCACCACTT+AGG - chr8_1:52399989-52400008 None:intergenic 35.0%
!!! AATGTATTTTGGCCAACGAT+AGG - chr8_1:52400032-52400051 None:intergenic 35.0%
TATGTACATACAACGCATTG+AGG + chr8_1:52400055-52400074 Msa1200090:CDS 35.0%
TCTCATTAAGGAACTCAACA+GGG - chr8_1:52400124-52400143 None:intergenic 35.0%
ATCTCATTAAGGAACTCAAC+AGG - chr8_1:52400125-52400144 None:intergenic 35.0%
CCAAATTTATTGACGATGAC+CGG - chr8_1:52400200-52400219 None:intergenic 35.0%
TTCATTTAACGTTATGGCTG+CGG + chr8_1:52400223-52400242 Msa1200090:CDS 35.0%
CGAAAAGGGTGAAAAATTAG+AGG + chr8_1:52400524-52400543 Msa1200090:CDS 35.0%
CATTAGCAACTACTATGATG+TGG + chr8_1:52400598-52400617 Msa1200090:CDS 35.0%
! TTGGCTTTCTTCAAACAAAG+TGG - chr8_1:52400648-52400667 None:intergenic 35.0%
! ACTTTGTTTGAAGAAAGCCA+AGG + chr8_1:52400647-52400666 Msa1200090:CDS 35.0%
TTTCTTTCTATGTATGGGCT+TGG - chr8_1:52401171-52401190 None:intergenic 35.0%
! CTTTTAGTGGTTTTTGTGGT+GGG - chr8_1:52401218-52401237 None:intergenic 35.0%
GTTCCGTTACCCATTTATAA+TGG + chr8_1:52401253-52401272 Msa1200090:intron 35.0%
CTCCCATTATAAATGGGTAA+CGG - chr8_1:52401259-52401278 None:intergenic 35.0%
CCTCTACTCCCATTATAAAT+GGG - chr8_1:52401265-52401284 None:intergenic 35.0%
TCCTCTACTCCCATTATAAA+TGG - chr8_1:52401266-52401285 None:intergenic 35.0%
!! TTTCACCATTCGTTTTGAGT+AGG + chr8_1:52401343-52401362 Msa1200090:intron 35.0%
!! TTCACCATTCGTTTTGAGTA+GGG + chr8_1:52401344-52401363 Msa1200090:intron 35.0%
AAATCCCTACTCAAAACGAA+TGG - chr8_1:52401351-52401370 None:intergenic 35.0%
TGAATGTGTGGCCATTTAAA+AGG - chr8_1:52401475-52401494 None:intergenic 35.0%
AAAAGTCAAGGGAACCAATA+TGG - chr8_1:52401561-52401580 None:intergenic 35.0%
! GGGGTTGCCTAATTTTTAAT+GGG + chr8_1:52401874-52401893 Msa1200090:intron 35.0%
! GGGTTGCCTAATTTTTAATG+GGG + chr8_1:52401875-52401894 Msa1200090:intron 35.0%
! ACTCGTTGTCTTTTTCTTGT+AGG + chr8_1:52402305-52402324 Msa1200090:intron 35.0%
GTTTCATCAATAACCTGCTA+GGG - chr8_1:52402554-52402573 None:intergenic 35.0%
TGTTTCATCAATAACCTGCT+AGG - chr8_1:52402555-52402574 None:intergenic 35.0%
! TATCTTTTCAGCTTTTCGGA+AGG + chr8_1:52402589-52402608 Msa1200090:CDS 35.0%
GGATTAAATTCTTCCGGATT+TGG - chr8_1:52402802-52402821 None:intergenic 35.0%
CTACTTACATTCCATCTTTC+TGG - chr8_1:52402823-52402842 None:intergenic 35.0%
CAGAAAGATGGAATGTAAGT+AGG + chr8_1:52402821-52402840 Msa1200090:intron 35.0%
TAGGATTACAATCCTACAAC+AGG + chr8_1:52403052-52403071 Msa1200090:intron 35.0%
!! ACATTTCTTCCCTTTGGAAT+AGG + chr8_1:52403076-52403095 Msa1200090:CDS 35.0%
CTATGCAACTGATAGAAGTT+TGG + chr8_1:52403732-52403751 Msa1200090:three_prime_UTR 35.0%
ATTGTAGCATCCTAGCAAAG+TGG - chr8_1:52399369-52399388 None:intergenic 40.0%
ACATGGGATGGCCTATTATT+GGG + chr8_1:52399474-52399493 Msa1200090:CDS 40.0%
CAAGTGTGTCTTGTACATAC+CGG - chr8_1:52399847-52399866 None:intergenic 40.0%
!! GTATGGACTAGATACCTAAG+TGG + chr8_1:52399972-52399991 Msa1200090:CDS 40.0%
GATACCTAAGTGGTGAACAT+AGG + chr8_1:52399982-52400001 Msa1200090:CDS 40.0%
!!! TTTTTTGGGATCTTGCGATC+CGG + chr8_1:52400178-52400197 Msa1200090:CDS 40.0%
CCGGTCATCGTCAATAAATT+TGG + chr8_1:52400197-52400216 Msa1200090:CDS 40.0%
TCATTTAACGTTATGGCTGC+GGG + chr8_1:52400224-52400243 Msa1200090:CDS 40.0%
! GCTTTGTTGAAAGCAAAACC+AGG - chr8_1:52400278-52400297 None:intergenic 40.0%
! TGCTTTCAACAAAGCACTCA+AGG + chr8_1:52400283-52400302 Msa1200090:CDS 40.0%
! TTCAACAAAGCACTCAAGGT+TGG + chr8_1:52400287-52400306 Msa1200090:intron 40.0%
ACTTCTTACGTGCCTAAGTT+AGG - chr8_1:52400398-52400417 None:intergenic 40.0%
AACTTAGGCACGTAAGAAGT+TGG + chr8_1:52400398-52400417 Msa1200090:intron 40.0%
!! AGGAAAGCGCTGCTAAAAAA+TGG + chr8_1:52400450-52400469 Msa1200090:CDS 40.0%
!! GGAAAGCGCTGCTAAAAAAT+GGG + chr8_1:52400451-52400470 Msa1200090:CDS 40.0%
TTGCATGGGAGAATATTGTG+AGG + chr8_1:52400837-52400856 Msa1200090:intron 40.0%
! AAGGGATGTCATGGGTATTT+TGG + chr8_1:52400952-52400971 Msa1200090:intron 40.0%
!!! ATGGGCTTGGTGGTTTATTT+TGG - chr8_1:52401158-52401177 None:intergenic 40.0%
! CCTTTTAGTGGTTTTTGTGG+TGG - chr8_1:52401219-52401238 None:intergenic 40.0%
CCACCACAAAAACCACTAAA+AGG + chr8_1:52401216-52401235 Msa1200090:intron 40.0%
! GGTCCTTTTAGTGGTTTTTG+TGG - chr8_1:52401222-52401241 None:intergenic 40.0%
! CCCATTTATAATGGGAGTAG+AGG + chr8_1:52401262-52401281 Msa1200090:intron 40.0%
AAAGTCAATACACTATGGGG+TGG + chr8_1:52401852-52401871 Msa1200090:intron 40.0%
AAGTCAATACACTATGGGGT+GGG + chr8_1:52401853-52401872 Msa1200090:intron 40.0%
! GGGGGTTGCCTAATTTTTAA+TGG + chr8_1:52401873-52401892 Msa1200090:intron 40.0%
AGTGCACCATATGTACAGTT+AGG + chr8_1:52402029-52402048 Msa1200090:intron 40.0%
!! CAAAATCGTTTTTGCGAGGA+TGG - chr8_1:52402360-52402379 None:intergenic 40.0%
!!! GATTTTTTTCCTACCCTAGC+AGG + chr8_1:52402538-52402557 Msa1200090:intron 40.0%
GCAACTGATGTGAACATCAA+TGG + chr8_1:52402614-52402633 Msa1200090:CDS 40.0%
! AGTAGCACTTTCCATCCTTT+TGG - chr8_1:52402742-52402761 None:intergenic 40.0%
!! AAGGATGGAAAGTGCTACTT+TGG + chr8_1:52402743-52402762 Msa1200090:CDS 40.0%
GGAAGAAATGTTCCTGTTGT+AGG - chr8_1:52403067-52403086 None:intergenic 40.0%
ACAGGAACATTTCTTCCCTT+TGG + chr8_1:52403070-52403089 Msa1200090:CDS 40.0%
GGAACTGGTATGTAAGTAAG+AGG - chr8_1:52403349-52403368 None:intergenic 40.0%
!! TTGTCTGTTGGTTTAGGAAC+TGG - chr8_1:52403364-52403383 None:intergenic 40.0%
!! AGACAGTTGTCTGTTGGTTT+AGG - chr8_1:52403370-52403389 None:intergenic 40.0%
GCTAAGGTTATAAAGCTCTC+CGG + chr8_1:52403391-52403410 Msa1200090:CDS 40.0%
GACATGGGATGGCCTATTAT+TGG + chr8_1:52399473-52399492 Msa1200090:CDS 45.0%
GGCCTATTATTGGGAACATG+TGG + chr8_1:52399483-52399502 Msa1200090:CDS 45.0%
GGCCACATGTTCCCAATAAT+AGG - chr8_1:52399488-52399507 None:intergenic 45.0%
GCAGAAGTGACTATGATGCT+TGG - chr8_1:52399879-52399898 None:intergenic 45.0%
TTCTGCTGCTATGTGCAAGA+AGG + chr8_1:52399893-52399912 Msa1200090:CDS 45.0%
CTAGTCACTTCTCCTATCGT+TGG + chr8_1:52400017-52400036 Msa1200090:CDS 45.0%
!! TTTATGCCCATAAAGGCACC+TGG + chr8_1:52400257-52400276 Msa1200090:CDS 45.0%
GCAAAACCAGGTGCCTTTAT+GGG - chr8_1:52400266-52400285 None:intergenic 45.0%
AGCAAAACCAGGTGCCTTTA+TGG - chr8_1:52400267-52400286 None:intergenic 45.0%
! CTGATAGCGCTATTGCTTAG+TGG + chr8_1:52400567-52400586 Msa1200090:CDS 45.0%
CTTTCTATGTATGGGCTTGG+TGG - chr8_1:52401168-52401187 None:intergenic 45.0%
!! TTAGTGGTTTTTGTGGTGGG+CGG - chr8_1:52401215-52401234 None:intergenic 45.0%
AAACCACTAAAAGGACCAGC+AGG + chr8_1:52401225-52401244 Msa1200090:intron 45.0%
AACCACTAAAAGGACCAGCA+GGG + chr8_1:52401226-52401245 Msa1200090:intron 45.0%
AACCAGTTGCTCAACATCCA+TGG + chr8_1:52401419-52401438 Msa1200090:intron 45.0%
AGTCAATACACTATGGGGTG+GGG + chr8_1:52401854-52401873 Msa1200090:intron 45.0%
CATCAATAACCTGCTAGGGT+AGG - chr8_1:52402550-52402569 None:intergenic 45.0%
! CTTTTCAGCTTTTCGGAAGG+CGG + chr8_1:52402592-52402611 Msa1200090:CDS 45.0%
!! AGTGCTACTTTGGCTAAGAG+CGG + chr8_1:52402753-52402772 Msa1200090:CDS 45.0%
TTGGCTAAGAGCGGTTCATA+TGG + chr8_1:52402762-52402781 Msa1200090:CDS 45.0%
TCCTGAGCATCATCCAAATC+CGG + chr8_1:52402786-52402805 Msa1200090:CDS 45.0%
! TGGTCATTTCAAGTCTGGCT+AGG - chr8_1:52403126-52403145 None:intergenic 45.0%
TTAGCGAGACAGTTGTCTGT+TGG - chr8_1:52403376-52403395 None:intergenic 45.0%
AACAGACAACTGTCTCGCTA+AGG + chr8_1:52403375-52403394 Msa1200090:CDS 45.0%
!!! GATTTTTTTTTAAAAAATAT+GGG - chr8_1:52401602-52401621 None:intergenic 5.0%
!!! TGATTTTTTTTTAAAAAATA+TGG - chr8_1:52401603-52401622 None:intergenic 5.0%
AAAGGACATCCACTACCTCC+TGG + chr8_1:52399449-52399468 Msa1200090:CDS 50.0%
GTCCATGGATGTTGAGCAAC+TGG - chr8_1:52401424-52401443 None:intergenic 50.0%
GTCAATACACTATGGGGTGG+GGG + chr8_1:52401855-52401874 Msa1200090:intron 50.0%
TCCGGATTTGGATGATGCTC+AGG - chr8_1:52402790-52402809 None:intergenic 50.0%
TGTCGCGAGCCTATTCCAAA+GGG - chr8_1:52403088-52403107 None:intergenic 50.0%
TCCACTACCTCCTGGTGACA+TGG + chr8_1:52399457-52399476 Msa1200090:CDS 55.0%
CCACTACCTCCTGGTGACAT+GGG + chr8_1:52399458-52399477 Msa1200090:CDS 55.0%
TACCTCCTGGTGACATGGGA+TGG + chr8_1:52399462-52399481 Msa1200090:CDS 55.0%
ATAGGCCATCCCATGTCACC+AGG - chr8_1:52399470-52399489 None:intergenic 55.0%
! GTCCCTGCTGGTCCTTTTAG+TGG - chr8_1:52401231-52401250 None:intergenic 55.0%
! GTAACGGAACATGTCCCTGC+TGG - chr8_1:52401243-52401262 None:intergenic 55.0%
GTGTCGCGAGCCTATTCCAA+AGG - chr8_1:52403089-52403108 None:intergenic 55.0%
AGTCTGGCTAGGTCACTTCC+TGG - chr8_1:52403115-52403134 None:intergenic 55.0%
CCCATGTCACCAGGAGGTAG+TGG - chr8_1:52399461-52399480 None:intergenic 60.0%
ATAGGCTCGCGACACTGTCC+AGG + chr8_1:52403094-52403113 Msa1200090:CDS 60.0%
GGCCATCCCATGTCACCAGG+AGG - chr8_1:52399467-52399486 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 52399335 52403765 52399335 ID=Msa1200090;Name=Msa1200090
chr8_1 mRNA 52399335 52403765 52399335 ID=Msa1200090-mRNA-1;Parent=Msa1200090;Name=Msa1200090-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.87|1|1|1|8|336|490
chr8_1 exon 52399335 52399567 52399335 ID=Msa1200090-mRNA-1:exon:16746;Parent=Msa1200090-mRNA-1
chr8_1 exon 52399833 52400304 52399833 ID=Msa1200090-mRNA-1:exon:16747;Parent=Msa1200090-mRNA-1
chr8_1 exon 52400405 52400668 52400405 ID=Msa1200090-mRNA-1:exon:16748;Parent=Msa1200090-mRNA-1
chr8_1 exon 52402327 52402416 52402327 ID=Msa1200090-mRNA-1:exon:16749;Parent=Msa1200090-mRNA-1
chr8_1 exon 52402560 52402635 52402560 ID=Msa1200090-mRNA-1:exon:16750;Parent=Msa1200090-mRNA-1
chr8_1 exon 52402728 52402834 52402728 ID=Msa1200090-mRNA-1:exon:16751;Parent=Msa1200090-mRNA-1
chr8_1 exon 52403055 52403176 52403055 ID=Msa1200090-mRNA-1:exon:16752;Parent=Msa1200090-mRNA-1
chr8_1 exon 52403321 52403765 52403321 ID=Msa1200090-mRNA-1:exon:16753;Parent=Msa1200090-mRNA-1
chr8_1 CDS 52399335 52399567 52399335 ID=Msa1200090-mRNA-1:cds;Parent=Msa1200090-mRNA-1
chr8_1 CDS 52399833 52400304 52399833 ID=Msa1200090-mRNA-1:cds;Parent=Msa1200090-mRNA-1
chr8_1 CDS 52400405 52400668 52400405 ID=Msa1200090-mRNA-1:cds;Parent=Msa1200090-mRNA-1
chr8_1 CDS 52402327 52402416 52402327 ID=Msa1200090-mRNA-1:cds;Parent=Msa1200090-mRNA-1
chr8_1 CDS 52402560 52402635 52402560 ID=Msa1200090-mRNA-1:cds;Parent=Msa1200090-mRNA-1
chr8_1 CDS 52402728 52402834 52402728 ID=Msa1200090-mRNA-1:cds;Parent=Msa1200090-mRNA-1
chr8_1 CDS 52403055 52403176 52403055 ID=Msa1200090-mRNA-1:cds;Parent=Msa1200090-mRNA-1
chr8_1 CDS 52403321 52403429 52403321 ID=Msa1200090-mRNA-1:cds;Parent=Msa1200090-mRNA-1
chr8_1 three_prime_UTR 52403430 52403765 52403430 ID=Msa1200090-mRNA-1:three_prime_utr;Parent=Msa1200090-mRNA-1
Gene Sequence

>Msa1200090

ATGGAAATACATTGGATTTGGATTTTTGTTGCCACTTTGCTAGGATGCTACAATTTTGCTGACAAAATTGTGAGGAATTTGAATGTGTGGTATTATGATTTTAAACTGAGAAAGAAAGGACATCCACTACCTCCTGGTGACATGGGATGGCCTATTATTGGGAACATGTGGCCCTTTTTCAAACACTTTTCATCTGGTCACCCTGATGAATTTGTCAATGACATTGTTCTTAAATATGGACAAACCGGTATGTACAAGACACACTTGTATGGATTTCCAAGCATCATAGTCACTTCTGCTGCTATGTGCAAGAAGGTTATGACAAATGATGTGAACTTTGAGGACGGTTATCCAAAATCGATCACTAAGCTAGTATGGACTAGATACCTAAGTGGTGAACATAGGTATTTTAAACGACTAGTCACTTCTCCTATCGTTGGCCAAAATACATTAGTTATGTACATACAACGCATTGAGGATATTATAATCGATAAGCTCGAAGAATTGTCTAGCATGAAACACCCTGTTGAGTTCCTTAATGAGATGAAGAATGTTTCCTTTAAAATCATCTTTCACATTTTTTTGGGATCTTGCGATCCGGTCATCGTCAATAAATTTGGAGATTCATTTAACGTTATGGCTGCGGGTATATTCTCTTTTATGCCCATAAAGGCACCTGGTTTTGCTTTCAACAAAGCACTCAAGGCACGTAAGAAGTTGGTCAAAATATTACAATCTATTGTTGATGAAAGGAAAGCGCTGCTAAAAAATGGGCAAATCGAAGAAAAGAAAGATCTTTTAGATATTCTTTTGGAAATAAACGACGAAAAGGGTGAAAAATTAGAGGTTGATGACATTATTGACTTTCTGATAGCGCTATTGCTTAGTGGTCATGAAACATTAGCAACTACTATGATGTGGTTAATTACATATCTTACAGAACATCCACTTTGTTTGAAGAAAGCCAAGGAAGAGCAAGAAGAAATCTTGAAAGCAAGACCATCCTCGCAAAAACGATTTTGTATTAAGGAAACTAAAAAAATGGTATATCTCTCTCGGGTTATTGATGAAACATTGCGCCATATCAGTATCTTTTCAGCTTTTCGGAAGGCGGCAACTGATGTGAACATCAATGGTTATTTCATACCAAAAGGATGGAAAGTGCTACTTTGGCTAAGAGCGGTTCATATGGATCCTGAGCATCATCCAAATCCGGAAGAATTTAATCCAGAAAGATGGAATGATTACAATCCTACAACAGGAACATTTCTTCCCTTTGGAATAGGCTCGCGACACTGTCCAGGAAGTGACCTAGCCAGACTTGAAATGACCATATTTCTACACCATTTCATCCTTAATTACAAGTTTGAGCGAATAAATCCAAAATGTCCTCTTACTTACATACCAGTTCCTAAACCAACAGACAACTGTCTCGCTAAGGTTATAAAGCTCTCCGGTGATCTTAAATTGTGA
Protein sequence

>Msa1200090

MEIHWIWIFVATLLGCYNFADKIVRNLNVWYYDFKLRKKGHPLPPGDMGWPIIGNMWPFFKHFSSGHPDEFVNDIVLKYGQTGMYKTHLYGFPSIIVTSAAMCKKVMTNDVNFEDGYPKSITKLVWTRYLSGEHRYFKRLVTSPIVGQNTLVMYIQRIEDIIIDKLEELSSMKHPVEFLNEMKNVSFKIIFHIFLGSCDPVIVNKFGDSFNVMAAGIFSFMPIKAPGFAFNKALKARKKLVKILQSIVDERKALLKNGQIEEKKDLLDILLEINDEKGEKLEVDDIIDFLIALLLSGHETLATTMMWLITYLTEHPLCLKKAKEEQEEILKARPSSQKRFCIKETKKMVYLSRVIDETLRHISIFSAFRKAATDVNINGYFIPKGWKVLLWLRAVHMDPEHHPNPEEFNPERWNDYNPTTGTFLPFGIGSRHCPGSDLARLEMTIFLHHFILNYKFERINPKCPLTYIPVPKPTDNCLAKVIKLSGDLKL*