AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1200260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200260 MtrunA17_Chr8g0369781 97.957 979 19 1 1 979 1 978 0.0 1964
Msa1200260 MtrunA17_Chr5g0413831 25.340 588 413 9 19 594 4 577 2.36e-59 219
Msa1200260 MtrunA17_Chr8g0364891 24.497 596 408 9 19 594 4 577 5.09e-53 200
Msa1200260 MtrunA17_Chr2g0320721 24.191 587 404 15 28 592 12 579 2.26e-52 199
Msa1200260 MtrunA17_Chr8g0391151 26.371 383 257 7 27 407 20 379 7.83e-23 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1200260 AT1G31730.1 70.031 981 249 12 1 979 1 938 0.0 1347
Msa1200260 AT1G60070.1 26.936 594 394 9 19 593 4 576 7.97e-64 233
Msa1200260 AT1G60070.2 26.936 594 394 9 19 593 4 576 2.31e-63 232
Msa1200260 AT1G23900.1 24.535 591 412 8 19 593 4 576 1.92e-55 208
Msa1200260 AT1G23900.2 24.535 591 412 8 19 593 4 576 1.92e-55 208
Msa1200260 AT1G23900.3 24.570 582 405 8 28 593 1 564 3.66e-54 204
Msa1200260 AT5G22770.5 26.522 460 315 10 65 511 48 497 6.60e-52 198
Msa1200260 AT5G22770.1 26.522 460 315 10 65 511 48 497 6.60e-52 198
Msa1200260 AT5G22770.4 26.522 460 315 10 65 511 48 497 6.60e-52 198
Msa1200260 AT5G22770.6 26.522 460 315 10 65 511 48 497 6.60e-52 198
Msa1200260 AT5G22770.2 26.522 460 315 10 65 511 48 497 6.60e-52 198
Msa1200260 AT5G22770.3 26.522 460 315 10 65 511 48 497 6.60e-52 198
Msa1200260 AT5G22780.2 25.321 545 367 14 65 588 48 573 1.15e-51 197
Msa1200260 AT5G22780.1 25.321 545 367 14 65 588 48 573 1.15e-51 197
Msa1200260 AT1G48760.2 25.257 487 310 13 41 510 31 480 3.17e-25 113
Msa1200260 AT1G48760.3 25.257 487 310 13 41 510 31 480 3.17e-25 113
Msa1200260 AT1G48760.1 25.257 487 310 13 41 510 31 480 3.17e-25 113
Msa1200260 AT1G23935.2 24.422 303 213 5 7 305 853 1143 2.18e-13 75.5
Msa1200260 AT1G23935.1 24.422 303 213 5 7 305 903 1193 2.22e-13 75.5
Msa1200260 AT1G23935.3 24.422 303 213 5 7 305 852 1142 2.27e-13 75.1

Find 300 sgRNAs with CRISPR-Local

Find 773 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCACTTCTGCCTGGTGTTC+TGG 0.095007 8_1:+52682633 Msa1200260:three_prime_UTR
TCATGCCATTCACTGGATTT+TGG 0.134245 8_1:-52681378 None:intergenic
ATGAATGTGATGTGTGAATT+TGG 0.138836 8_1:-52670797 None:intergenic
TACAAATGCACCTGATATTA+TGG 0.160773 8_1:+52681792 Msa1200260:CDS
TTTATGCTATCTGTTCTTAA+AGG 0.174003 8_1:+52682662 Msa1200260:three_prime_UTR
TATGAATTACAAGCTGTTAT+TGG 0.204151 8_1:+52679701 Msa1200260:CDS
AGGTTATTTGTTGGGTTCTT+GGG 0.216014 8_1:+52675415 Msa1200260:intron
AACATCAATCATGGAGAAAT+TGG 0.220355 8_1:-52682599 None:intergenic
CCGTTATTGGCGATATAATT+AGG 0.223296 8_1:+52672955 Msa1200260:CDS
CAGGTTATTTGTTGGGTTCT+TGG 0.225264 8_1:+52675414 Msa1200260:intron
GAACACATGTACACCGTTAT+TGG 0.232178 8_1:+52672942 Msa1200260:CDS
GTCCAGATTCTTGCTGATCT+TGG 0.234688 8_1:-52681093 None:intergenic
TGTTGGGTTCTTGGGGAATA+TGG 0.245639 8_1:+52675423 Msa1200260:CDS
ACTCTTTCATCTTCCGTTTA+GGG 0.247975 8_1:-52671089 None:intergenic
ATTGGTTGTTACGGAGGTTT+TGG 0.259354 8_1:-52670886 None:intergenic
CAAACTGCAGTGTCAATCTT+TGG 0.260684 8_1:+52679631 Msa1200260:intron
TTAGTCATCATTCCTGGATA+TGG 0.262973 8_1:-52682231 None:intergenic
GCTCTCCTCGGATGCTTTAA+TGG 0.268566 8_1:-52681620 None:intergenic
CAACTTGGGATTGGGATATA+TGG 0.275024 8_1:-52673042 None:intergenic
TGCTAATGCTAAAGATTCTT+TGG 0.275970 8_1:+52681969 Msa1200260:CDS
TACTCTTTCATCTTCCGTTT+AGG 0.276919 8_1:-52671090 None:intergenic
ATCTTCCGTTTAGGGATATC+TGG 0.279722 8_1:-52671081 None:intergenic
CTCGGTCACGACGCTTCTTT+CGG 0.282371 8_1:+52671141 Msa1200260:CDS
TTGGATCCGGTGATGGTTCC+CGG 0.293013 8_1:-52670867 None:intergenic
TCACTTCTGCCTGGTGTTCT+GGG 0.294529 8_1:+52682634 Msa1200260:three_prime_UTR
TACCAAAACACTGTTTCTTT+TGG 0.298385 8_1:+52682418 Msa1200260:three_prime_UTR
TGCCGTCATTGACTGCTTAG+AGG 0.309383 8_1:+52673310 Msa1200260:CDS
GTTGCATTGTATCCAGGTTT+TGG 0.317606 8_1:+52682305 Msa1200260:three_prime_UTR
GATTCGGTCTTCTTCGGCTT+TGG 0.319752 8_1:-52671016 None:intergenic
AAGCTTGCCGCTTCATTGTT+TGG 0.324600 8_1:+52681493 Msa1200260:CDS
GAGTCATATTTGCGCATTAT+TGG 0.327916 8_1:+52675266 Msa1200260:CDS
GGATATCTGGTTCGGAGATT+CGG 0.335176 8_1:-52671068 None:intergenic
CACTGGGAAGTTATGCGATA+TGG 0.347901 8_1:+52675479 Msa1200260:CDS
CTAGTTGATGTTCTTCTCTC+AGG 0.348573 8_1:-52681529 None:intergenic
CGGTTGATTGCAGAAGGATT+TGG 0.350957 8_1:+52675100 Msa1200260:CDS
CTGATTACAGGTTATTTGTT+GGG 0.351601 8_1:+52675407 Msa1200260:intron
CGCAGCAGCTTCTAACAACT+TGG 0.351640 8_1:-52673057 None:intergenic
GATCGGAGGGGTTGTGGTTA+TGG 0.353868 8_1:-52670822 None:intergenic
GCAGCACCAACATTAGCTTT+TGG 0.353994 8_1:-52681562 None:intergenic
TCCACAAGATTTGCTTGACT+TGG 0.356959 8_1:+52681660 Msa1200260:CDS
AGCCAAGATCAGCAAGAATC+TGG 0.360813 8_1:+52681091 Msa1200260:CDS
GCTTCCATCAGTGTTTCTTC+AGG 0.362276 8_1:+52675298 Msa1200260:CDS
AACCAAAAGAAACAGTGTTT+TGG 0.365114 8_1:-52682420 None:intergenic
TGATAATGATCCTGGTGTTA+TGG 0.371274 8_1:+52671518 Msa1200260:CDS
ATCAGATAGCCAATTGGTTC+AGG 0.372653 8_1:-52682138 None:intergenic
TTTGATGGCACAGGAGCCTT+TGG 0.375463 8_1:-52681148 None:intergenic
TGGAGATCTTGTGAATATTA+AGG 0.376401 8_1:+52675060 Msa1200260:CDS
TGAATGTGATGTGTGAATTT+GGG 0.380065 8_1:-52670796 None:intergenic
CACAAGATATTCCACCAGTA+TGG 0.386415 8_1:-52682095 None:intergenic
GGTTAGGAAGAAAGCGGTTA+TGG 0.386716 8_1:+52671422 Msa1200260:CDS
TACCTCAATGTCTTCGCAAC+TGG 0.388904 8_1:-52679765 None:intergenic
GCTGATTACAGGTTATTTGT+TGG 0.389807 8_1:+52675406 Msa1200260:intron
CTCTCCTCGGATGCTTTAAT+GGG 0.390827 8_1:-52681619 None:intergenic
GATTACGATTCGGTCTTCTT+CGG 0.392121 8_1:-52671022 None:intergenic
ATTCACCGATTGATTTGATT+AGG 0.392413 8_1:-52670987 None:intergenic
ATATGGAATCACCCAATTCT+TGG 0.392577 8_1:-52682214 None:intergenic
TGGTGATAATCATAGCTCTT+AGG 0.393881 8_1:-52671651 None:intergenic
CCCGGAGGTGGTTACGGTGG+TGG 0.394575 8_1:-52670849 None:intergenic
CTGAAAATTCTTGCATTGTT+GGG 0.395186 8_1:+52672897 Msa1200260:CDS
CACTTCCACATTGGAAGACT+TGG 0.396065 8_1:-52674794 None:intergenic
GCATAACTTCCCAGTGATAT+AGG 0.398047 8_1:-52675472 None:intergenic
TCATCAGATACAGGATCATC+AGG 0.400967 8_1:+52681268 Msa1200260:CDS
ACCTTTGTCATGCCATTCAC+TGG 0.403390 8_1:-52681385 None:intergenic
TGATTGCAGCCACCAAGAAT+TGG 0.403833 8_1:+52682202 Msa1200260:three_prime_UTR
ATTACAAGCTGTTATTGGTT+TGG 0.405372 8_1:+52679706 Msa1200260:CDS
TTCTAATGATGAAATTGTTA+AGG 0.405378 8_1:+52675512 Msa1200260:CDS
AGAAACACTGATGGAAGCTT+TGG 0.407807 8_1:-52675293 None:intergenic
GATATTATGGGACTCTATAG+TGG 0.407931 8_1:+52681805 Msa1200260:CDS
CATGAATGGGTCCACGGTGG+GGG 0.409859 8_1:-52681707 None:intergenic
CTAACAACAAGATCCTTATA+CGG 0.410448 8_1:-52671588 None:intergenic
GAACGAAAGGAGCCGGCATC+TGG 0.411704 8_1:-52671671 None:intergenic
CAGAGTAACGGCGAGATAAC+CGG 0.412139 8_1:-52671217 None:intergenic
GCTTCTAACAACTTGGGATT+GGG 0.412784 8_1:-52673050 None:intergenic
GGGCTTAAGCTAAGGCTTGA+TGG 0.413978 8_1:+52681289 Msa1200260:CDS
GTGATGTGTGAATTTGGGTT+TGG 0.414086 8_1:-52670791 None:intergenic
CTGTTATTGGTTTGGATGCA+CGG 0.417412 8_1:+52679714 Msa1200260:CDS
GATAATGATCCTGGTGTTAT+GGG 0.418077 8_1:+52671519 Msa1200260:CDS
GCTGAAAATTCTTGCATTGT+TGG 0.418206 8_1:+52672896 Msa1200260:CDS
GTCGTGGATGATAGTGAAAC+TGG 0.422782 8_1:-52681178 None:intergenic
CCGTTTAGGGATATCTGGTT+CGG 0.424087 8_1:-52671076 None:intergenic
AGCTTCTAACAACTTGGGAT+TGG 0.425340 8_1:-52673051 None:intergenic
GAGTAATCATTGGTTTATAC+AGG 0.425577 8_1:+52674918 Msa1200260:CDS
CTATAGAGTCCCATAATATC+AGG 0.426017 8_1:-52681802 None:intergenic
TCCACCACCGTAACCACCTC+CGG 0.428280 8_1:+52670848 Msa1200260:five_prime_UTR
ACACTTTCTTTGGAAGTTCA+AGG 0.428794 8_1:+52682380 Msa1200260:three_prime_UTR
CCAGGAATGATGACTAAAAC+AGG 0.430110 8_1:+52682237 Msa1200260:three_prime_UTR
CAGATGGGTGTGACCCCAAC+TGG 0.430929 8_1:+52682012 Msa1200260:CDS
ATGGGATCACAAGGCGCGTT+CGG 0.435386 8_1:+52670943 Msa1200260:CDS
GCAGCTGTCAGAGGCACAAC+GGG 0.436109 8_1:+52681907 Msa1200260:CDS
AGTTGGGATTCTGTCCAGTT+GGG 0.436391 8_1:-52682026 None:intergenic
GAATTTGAGGAGGATGATGC+TGG 0.436880 8_1:-52681349 None:intergenic
AGTTGCTCCATTGGTTGTTA+CGG 0.437859 8_1:-52670895 None:intergenic
GGATCTGATCGGAGGGGTTG+TGG 0.439297 8_1:-52670828 None:intergenic
GATGCCGGCTCCTTTCGTTC+AGG 0.441178 8_1:+52671674 Msa1200260:CDS
CACACATCGAGAAGCTATAT+AGG 0.442550 8_1:-52674872 None:intergenic
AATTTGCACCGAGTAATCAT+TGG 0.445556 8_1:+52674908 Msa1200260:CDS
TCATAGCTTTCATCGGAAAT+CGG 0.448565 8_1:+52671449 Msa1200260:CDS
ATTCTTCGGTCACTTCTGCC+TGG 0.450095 8_1:+52682625 Msa1200260:three_prime_UTR
GACCCATTCATGCAACTAGA+AGG 0.451396 8_1:+52681718 Msa1200260:CDS
ATGGTTCCCGGAGGTGGTTA+CGG 0.451475 8_1:-52670855 None:intergenic
TTCGTTGATTAATCTACAAA+CGG 0.451855 8_1:-52671340 None:intergenic
TTCCTCGTTGCATTGTATCC+AGG 0.453431 8_1:+52682299 Msa1200260:three_prime_UTR
ACAAATGCACCTGATATTAT+GGG 0.455505 8_1:+52681793 Msa1200260:CDS
ATATACATTGTGATCTAGAA+TGG 0.458083 8_1:+52682178 Msa1200260:three_prime_UTR
TATCAAGCTTCTCATTGATA+AGG 0.458602 8_1:-52682484 None:intergenic
TTTCGCTTCAAAGTATCGTC+AGG 0.463858 8_1:-52674745 None:intergenic
GCGCTCGTTCTCTGATATGT+AGG 0.465295 8_1:-52681038 None:intergenic
GATTGCAGCCACCAAGAATT+GGG 0.465511 8_1:+52682203 Msa1200260:three_prime_UTR
GGGGAATATGGCACAGCTGA+TGG 0.467637 8_1:+52675435 Msa1200260:CDS
AATCGTTAATACGATTCAAA+AGG 0.468077 8_1:+52671272 Msa1200260:CDS
CCACAAGATTTGCTTGACTT+GGG 0.468481 8_1:+52681661 Msa1200260:CDS
AGGAAAGTTGTAAACCATAC+TGG 0.468978 8_1:+52682081 Msa1200260:three_prime_UTR
CCCCACTTTCTATAGCCTGC+TGG 0.471779 8_1:-52681009 None:intergenic
CGATTTCACGGATTACGATT+CGG 0.471806 8_1:-52671032 None:intergenic
TATGCGTTTGAAATAGCAGC+TGG 0.472441 8_1:+52678138 Msa1200260:CDS
CCGGTGATGGTTCCCGGAGG+TGG 0.472729 8_1:-52670861 None:intergenic
ACAGCATGGTCTGAGATTTG+AGG 0.473050 8_1:+52681114 Msa1200260:CDS
AGTCCTTCTAGTTGCATGAA+TGG 0.473320 8_1:-52681721 None:intergenic
AAGAATGAAAACATCAATCA+TGG 0.475708 8_1:-52682608 None:intergenic
TGCATGAATGGGTCCACGGT+GGG 0.476459 8_1:-52681709 None:intergenic
ATATCAGAGAACGAGCGCTC+TGG 0.477437 8_1:+52681043 Msa1200260:CDS
AGCAAGTCTCTGAACAAGTT+GGG 0.478029 8_1:-52682042 None:intergenic
GTCCTTCTAGTTGCATGAAT+GGG 0.486983 8_1:-52681720 None:intergenic
CCACCTCCGGGAACCATCAC+CGG 0.487450 8_1:+52670861 Msa1200260:five_prime_UTR
GTGCAGTTTCCTGAACCAAT+TGG 0.488484 8_1:+52682129 Msa1200260:three_prime_UTR
CCTAATTATATCGCCAATAA+CGG 0.489566 8_1:-52672955 None:intergenic
GCATGAATGGGTCCACGGTG+GGG 0.492744 8_1:-52681708 None:intergenic
GGTGATTCATCAAGTAACAT+AGG 0.492869 8_1:+52672981 Msa1200260:CDS
CATTCCGCTTCCTATATCAC+TGG 0.494068 8_1:+52675462 Msa1200260:CDS
GGTTATTTGTTGGGTTCTTG+GGG 0.494517 8_1:+52675416 Msa1200260:intron
ATTCTTGCATTGTTGGGAAG+TGG 0.495732 8_1:+52672903 Msa1200260:CDS
TGCTAAAGATTCTTTGGAGA+AGG 0.496576 8_1:+52681975 Msa1200260:CDS
ATATTATGGGACTCTATAGT+GGG 0.499149 8_1:+52681806 Msa1200260:CDS
CTCGACCTAATCAAATCAAT+CGG 0.500422 8_1:+52670982 Msa1200260:CDS
CTTGCCGCTTCATTGTTTGG+CGG 0.500585 8_1:+52681496 Msa1200260:CDS
GGCTAGGCCTGACCAAAACC+TGG 0.503367 8_1:-52682317 None:intergenic
GTTGTTGAGCTTCTTTCGCA+TGG 0.504811 8_1:+52671390 Msa1200260:CDS
ATAATCCCACTGACGTGATC+TGG 0.505989 8_1:-52681246 None:intergenic
CCTCAATGATTATATCCAGC+AGG 0.506143 8_1:+52680994 Msa1200260:CDS
CCCTTCACAGATTGTGATAC+GGG 0.506698 8_1:-52681946 None:intergenic
CTTACTGTAGAACTAATGCT+TGG 0.508595 8_1:-52681751 None:intergenic
GAGAAATTGGTCTTCAACAA+AGG 0.510003 8_1:-52682586 None:intergenic
GTGGGATTATCATCAGATAC+AGG 0.511328 8_1:+52681259 Msa1200260:CDS
CGCATGGGAAAGAAGCGGTT+AGG 0.511994 8_1:+52671406 Msa1200260:CDS
TAGTCATAATCTGAAATACA+TGG 0.515074 8_1:+52673226 Msa1200260:CDS
CTCAACAACTAACGGCAAAA+CGG 0.515966 8_1:-52671376 None:intergenic
TGGAGAAGGATGCAAAAGTC+AGG 0.518290 8_1:+52681989 Msa1200260:CDS
ATGGAGCAACTGAAAACAAT+CGG 0.518330 8_1:+52670907 Msa1200260:CDS
AATCGGCCGCGAACTCGCCA+TGG 0.522408 8_1:+52670924 Msa1200260:CDS
TTAAACAGGTAGCTGAACAT+AGG 0.522822 8_1:+52671625 Msa1200260:CDS
GTGATCCCATGGCGAGTTCG+CGG 0.523154 8_1:-52670930 None:intergenic
GTTTACAACTTTCCTCTCAT+CGG 0.523757 8_1:-52682073 None:intergenic
TCATCGGAAATCGGCGTCGT+CGG 0.526881 8_1:+52671458 Msa1200260:CDS
ATCCAGCAGGCTATAGAAAG+TGG 0.527579 8_1:+52681007 Msa1200260:CDS
GCATATATCAGATAGCCAAT+TGG 0.530511 8_1:-52682144 None:intergenic
AAGCAAGTCTCTGAACAAGT+TGG 0.532860 8_1:-52682043 None:intergenic
TTGTGGAGGAGATTGTTGAT+TGG 0.535875 8_1:-52681644 None:intergenic
CTTGATACTGCGGTCATAGT+CGG 0.536146 8_1:+52682500 Msa1200260:three_prime_UTR
CCGAACCAGATATCCCTAAA+CGG 0.536714 8_1:+52671076 Msa1200260:CDS
TGGTCAGGCCTAGCCTCTGA+AGG 0.537658 8_1:+52682325 Msa1200260:three_prime_UTR
AATTGGGTGATTCCATATCC+AGG 0.538468 8_1:+52682219 Msa1200260:three_prime_UTR
ACTGCCCAAAATCCAGTGAA+TGG 0.538629 8_1:+52681373 Msa1200260:CDS
TATTGGCGATATAATTAGGA+AGG 0.540723 8_1:+52672959 Msa1200260:CDS
TGGCGCTTCATAGCTTTCAT+CGG 0.541505 8_1:+52671442 Msa1200260:CDS
TTGTTGATTGGAGCTCTCCT+CGG 0.541694 8_1:-52681632 None:intergenic
GTTACGGTGGTGGATCTGAT+CGG 0.542489 8_1:-52670839 None:intergenic
CACTTCTGCCTGGTGTTCTG+GGG 0.543554 8_1:+52682635 Msa1200260:three_prime_UTR
CGCTCGTTCTCTGATATGTA+GGG 0.543766 8_1:-52681037 None:intergenic
GTGATTCATCAAGTAACATA+GGG 0.544692 8_1:+52672982 Msa1200260:CDS
CGGTGGTGGATCTGATCGGA+GGG 0.544803 8_1:-52670835 None:intergenic
CTTCCCAGTGATATAGGAAG+CGG 0.546539 8_1:-52675466 None:intergenic
AAGTTGGGATTCTGTCCAGT+TGG 0.548304 8_1:-52682027 None:intergenic
ACCCTTCACAGATTGTGATA+CGG 0.548453 8_1:-52681947 None:intergenic
TTACTGTAGAACTAATGCTT+GGG 0.548787 8_1:-52681750 None:intergenic
CAGGCCTAGCCTCTGAAGGA+AGG 0.549168 8_1:+52682329 Msa1200260:three_prime_UTR
ATGAATGGGTCCACGGTGGG+GGG 0.550013 8_1:-52681706 None:intergenic
TGCTCCATTGGTTGTTACGG+AGG 0.551475 8_1:-52670892 None:intergenic
TTAATGCGGTTGATTGCAGA+AGG 0.553103 8_1:+52675094 Msa1200260:CDS
GATCATCAGGGCTTAAGCTA+AGG 0.553819 8_1:+52681281 Msa1200260:CDS
GACTGACCTTGTTCCAGTGT+CGG 0.553943 8_1:+52681198 Msa1200260:CDS
TTCATCATTAGAATATGCCT+CGG 0.559232 8_1:-52675502 None:intergenic
AACTTGTTCAGAGACTTGCT+TGG 0.559297 8_1:+52682045 Msa1200260:CDS
GCCCGTATCACAATCTGTGA+AGG 0.559581 8_1:+52681945 Msa1200260:CDS
ATCGGCCGCGAACTCGCCAT+GGG 0.561265 8_1:+52670925 Msa1200260:CDS
ATCACCTGAACGAAAGGAGC+CGG 0.561526 8_1:-52671678 None:intergenic
TAAACAATCCCCAGAACACC+AGG 0.561744 8_1:-52682643 None:intergenic
TTGTTGAGCTTCTTTCGCAT+GGG 0.561760 8_1:+52671391 Msa1200260:CDS
GTCAACGATCACTTCCACAT+TGG 0.561875 8_1:-52674803 None:intergenic
CTTCTCTACGTTGAAATGCT+CGG 0.563060 8_1:+52671123 Msa1200260:CDS
TCCAGCAGGCTATAGAAAGT+GGG 0.565415 8_1:+52681008 Msa1200260:CDS
TTGGGCAGTAGAATTTGAGG+AGG 0.566047 8_1:-52681359 None:intergenic
CTATATAGCTTCTCGATGTG+TGG 0.566142 8_1:+52674873 Msa1200260:CDS
GGGTTTGGAGAGTGTGAAGG+TGG 0.566574 8_1:-52670776 None:intergenic
TCTAGTGAACAGAGTGGTGG+CGG 0.566941 8_1:+52681835 Msa1200260:CDS
ATAACAATCACCTGAACGAA+AGG 0.567560 8_1:-52671684 None:intergenic
GGATGCAAAAGTCAGGCAGA+TGG 0.568516 8_1:+52681996 Msa1200260:CDS
TTGATGGTGTTCAGAAGAAG+TGG 0.570317 8_1:+52681305 Msa1200260:CDS
TGGTGCTGCAGACAGACCTC+AGG 0.571390 8_1:+52681576 Msa1200260:CDS
ACAACTAACGGCAAAACGGC+AGG 0.571577 8_1:-52671372 None:intergenic
GATGCAAAAGTCAGGCAGAT+GGG 0.571902 8_1:+52681997 Msa1200260:CDS
TTGCTGCAAATCAGTGGAGT+GGG 0.571915 8_1:-52679672 None:intergenic
AGTGAACAGAGTGGTGGCGG+CGG 0.572269 8_1:+52681838 Msa1200260:CDS
TGAGGCTTATGAAGTTCCAA+AGG 0.572646 8_1:+52681132 Msa1200260:CDS
AATAGCAGCTGGGAGGAAAG+TGG 0.575708 8_1:+52678149 Msa1200260:CDS
CACTGGAACAAGGTCAGTCG+TGG 0.576617 8_1:-52681194 None:intergenic
GTTGGGATTCTGTCCAGTTG+GGG 0.577231 8_1:-52682025 None:intergenic
GTACCCTTCCTTCAGAGGCT+AGG 0.581765 8_1:-52682333 None:intergenic
CCACCACCGTAACCACCTCC+GGG 0.582024 8_1:+52670849 Msa1200260:five_prime_UTR
AAAACCTCCGTAACAACCAA+TGG 0.582707 8_1:+52670888 Msa1200260:exon
TGGAATCACCCAATTCTTGG+TGG 0.583073 8_1:-52682211 None:intergenic
CCTGCTGGATATAATCATTG+AGG 0.583089 8_1:-52680994 None:intergenic
TAACAGTACCCTTCCTTCAG+AGG 0.587441 8_1:-52682338 None:intergenic
TGTATAAACCAATGATTACT+CGG 0.587543 8_1:-52674916 None:intergenic
GCAGCAGCTTCTAACAACTT+GGG 0.588158 8_1:-52673056 None:intergenic
AGATTGTGTGATAATGATCC+TGG 0.589052 8_1:+52671510 Msa1200260:CDS
GAACGCGCCTTGTGATCCCA+TGG 0.589618 8_1:-52670941 None:intergenic
TGATGTTGTTCTGCAATAAG+CGG 0.590067 8_1:-52673284 None:intergenic
ACGGTGGTGGATCTGATCGG+AGG 0.590640 8_1:-52670836 None:intergenic
AGGCGCGTTCGGTCAATCAA+AGG 0.591815 8_1:+52670954 Msa1200260:CDS
GTCGGACTCATTGTATGCGA+GGG 0.592330 8_1:+52681216 Msa1200260:CDS
TTTGGGTTTGGAGAGTGTGA+AGG 0.593662 8_1:-52670779 None:intergenic
AGTACCTGAAGAAACACTGA+TGG 0.594329 8_1:-52675302 None:intergenic
TGTTATTGGTTTGGATGCAC+GGG 0.595115 8_1:+52679715 Msa1200260:CDS
AGCTGCTGCATTTGACAACC+CGG 0.596068 8_1:-52681890 None:intergenic
GCATACAATGAGTCCGACAC+TGG 0.596909 8_1:-52681211 None:intergenic
TGATCATGTACTCAATCATA+CGG 0.597576 8_1:-52674825 None:intergenic
TACCTCTAAGCAGTCAATGA+CGG 0.597831 8_1:-52673312 None:intergenic
TGCCAGTTGCGAAGACATTG+AGG 0.598185 8_1:+52679763 Msa1200260:CDS
AATCTTCTCTCAAAACGCAC+CGG 0.598198 8_1:+52671198 Msa1200260:CDS
GATGCTGGAGATGAATAAGC+TGG 0.601549 8_1:-52681334 None:intergenic
AGGCCTAGCCTCTGAAGGAA+GGG 0.601679 8_1:+52682330 Msa1200260:three_prime_UTR
GATTGCAGAAGGATTTGGAG+AGG 0.602461 8_1:+52675105 Msa1200260:CDS
TTGCATGAATGGGTCCACGG+TGG 0.602753 8_1:-52681710 None:intergenic
TGAGATCGTGATCGTCGTTG+AGG 0.604788 8_1:-52671242 None:intergenic
AGCGCGTTGCTGCAAATCAG+TGG 0.605784 8_1:-52679678 None:intergenic
AGAGAACGAGCGCTCTGGAG+CGG 0.605954 8_1:+52681048 Msa1200260:CDS
TGTCGGACTCATTGTATGCG+AGG 0.606090 8_1:+52681215 Msa1200260:CDS
AAGGTTCCAAAAGCTAATGT+TGG 0.606418 8_1:+52681556 Msa1200260:CDS
AGCAGCTGTCAGAGGCACAA+CGG 0.606641 8_1:+52681906 Msa1200260:CDS
CAGCAAGAATCTGGACAGCA+TGG 0.608062 8_1:+52681100 Msa1200260:CDS
TGCTTGGCTAATCCGATGAG+AGG 0.608335 8_1:+52682061 Msa1200260:exon
GACTCACCAGATCACGTCAG+TGG 0.610506 8_1:+52681240 Msa1200260:CDS
TGATGGTGTTCAGAAGAAGT+GGG 0.611696 8_1:+52681306 Msa1200260:CDS
CTATGATTATCACCAGATGC+CGG 0.613011 8_1:+52671659 Msa1200260:CDS
TCCAGTGAATGGCATGACAA+AGG 0.613450 8_1:+52681384 Msa1200260:CDS
TATGGAAGAGACACAGCGAA+TGG 0.616828 8_1:-52673024 None:intergenic
AAAATTGTAGTGATAAATGA+TGG 0.617280 8_1:+52682549 Msa1200260:three_prime_UTR
ATTCCGCTTCCTATATCACT+GGG 0.617876 8_1:+52675463 Msa1200260:CDS
GAACTCGCCATGGGATCACA+AGG 0.618854 8_1:+52670934 Msa1200260:CDS
CCCAAGTCAAGCAAATCTTG+TGG 0.620345 8_1:-52681661 None:intergenic
CAAGTTGTTAGAAGCTGCTG+CGG 0.622141 8_1:+52673058 Msa1200260:CDS
CCCGTATCACAATCTGTGAA+GGG 0.622447 8_1:+52681946 Msa1200260:CDS
GTAAACGACGTCGTGTACGA+CGG 0.623284 8_1:-52670739 None:intergenic
ATGCGTTTGAAATAGCAGCT+GGG 0.623907 8_1:+52678139 Msa1200260:CDS
GTTCCCGGAGGTGGTTACGG+TGG 0.625369 8_1:-52670852 None:intergenic
TAGTTGCATGAATGGGTCCA+CGG 0.625443 8_1:-52681713 None:intergenic
ACAAGATCCTTATACGGACT+CGG 0.627246 8_1:-52671582 None:intergenic
GTCGTTGAGGAACAGAGTAA+CGG 0.628932 8_1:-52671229 None:intergenic
TCAAATGCAGCAGCTGTCAG+AGG 0.630728 8_1:+52681898 Msa1200260:CDS
GAAAGAAGCTCAACAACTAA+CGG 0.631117 8_1:-52671384 None:intergenic
ATTGGCGATATAATTAGGAA+GGG 0.632401 8_1:+52672960 Msa1200260:CDS
ACTCACCAGATCACGTCAGT+GGG 0.633090 8_1:+52681241 Msa1200260:CDS
GTTGCTGCAAATCAGTGGAG+TGG 0.633925 8_1:-52679673 None:intergenic
CGATCTCAGCTGACTATATG+CGG 0.636229 8_1:-52675137 None:intergenic
GAAGTTATGCGATATGGCCG+AGG 0.636501 8_1:+52675485 Msa1200260:CDS
GGTTCAGGAAACTGCACGTG+CGG 0.639642 8_1:-52682123 None:intergenic
AGGAAGGGTACTGTTATGCA+TGG 0.639701 8_1:+52682345 Msa1200260:three_prime_UTR
AGTCATAATCTGAAATACAT+GGG 0.639996 8_1:+52673227 Msa1200260:CDS
ATGAGTCCGACACTGGAACA+AGG 0.640091 8_1:-52681204 None:intergenic
GAAAGTGGATATGCTATCTG+AGG 0.642288 8_1:+52678164 Msa1200260:CDS
TCTTCGCAACTGGCATCATG+TGG 0.645470 8_1:-52679755 None:intergenic
ACAGATTGTGATACGGGCGA+CGG 0.646894 8_1:-52681940 None:intergenic
AGAACCGCCAAACAATGAAG+CGG 0.647321 8_1:-52681500 None:intergenic
GCTACGATTCAAGAAAGCAA+CGG 0.647361 8_1:+52681446 Msa1200260:CDS
AAAGTTGTAAACCATACTGG+TGG 0.647681 8_1:+52682084 Msa1200260:three_prime_UTR
AAGAACATCAACTAGCAGCA+AGG 0.653866 8_1:+52681537 Msa1200260:CDS
AGGTTGCACATAATTTAATG+CGG 0.654401 8_1:+52675080 Msa1200260:CDS
CAATGAGAAGCTTGATACTG+CGG 0.656993 8_1:+52682490 Msa1200260:three_prime_UTR
TCTTTCGCATGGGAAAGAAG+CGG 0.658045 8_1:+52671401 Msa1200260:CDS
AGAGTAGCACCCATAACACC+AGG 0.658462 8_1:-52671528 None:intergenic
CATCAGATACAGGATCATCA+GGG 0.658760 8_1:+52681269 Msa1200260:CDS
GGCGGCTATAACTCTGCAAG+TGG 0.660521 8_1:+52681856 Msa1200260:CDS
AGTGAATGGCATGACAAAGG+TGG 0.661156 8_1:+52681387 Msa1200260:CDS
CCAGCAGGCTATAGAAAGTG+GGG 0.661545 8_1:+52681009 Msa1200260:CDS
TACATGGGTATTGATGCTCT+CGG 0.662992 8_1:+52673242 Msa1200260:CDS
AAGTCAAGCAAATCTTGTGG+AGG 0.665010 8_1:-52681658 None:intergenic
TAAGTGCAGCACAAACGACA+AGG 0.667985 8_1:-52671314 None:intergenic
GTCGTCGGTTTCACATCTTG+TGG 0.671515 8_1:+52671473 Msa1200260:CDS
TGTGCCCATTAAAGCATCCG+AGG 0.672072 8_1:+52681615 Msa1200260:CDS
TCGCTTATAAGATCAAACAA+AGG 0.675984 8_1:-52671555 None:intergenic
AATGACCAAGTCTTCCAATG+TGG 0.681347 8_1:+52674789 Msa1200260:CDS
ACTTCTAGTGAACAGAGTGG+TGG 0.689546 8_1:+52681832 Msa1200260:CDS
GGTGGTGGATCTGATCGGAG+GGG 0.702003 8_1:-52670834 None:intergenic
GATGGTGTTCAGAAGAAGTG+GGG 0.704018 8_1:+52681307 Msa1200260:CDS
CGTTTGAAATAGCAGCTGGG+AGG 0.708061 8_1:+52678142 Msa1200260:CDS
TATTATGGGACTCTATAGTG+GGG 0.715463 8_1:+52681807 Msa1200260:CDS
GATCCGGTGATGGTTCCCGG+AGG 0.734675 8_1:-52670864 None:intergenic
AGAAGCGGTTAGGAAGAAAG+CGG 0.739854 8_1:+52671416 Msa1200260:CDS
GCTACTTCTAGTGAACAGAG+TGG 0.788832 8_1:+52681829 Msa1200260:CDS
AACCTGGATACAATGCAACG+AGG 0.799379 8_1:-52682301 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATATATATTATAAAAA+AGG + chr8_1:52673786-52673805 Msa1200260:intron 0.0%
!!! TATATATCATTTTTACATAA+GGG - chr8_1:52673622-52673641 None:intergenic 10.0%
!!! ATATATATCATTTTTACATA+AGG - chr8_1:52673623-52673642 None:intergenic 10.0%
!!! ATATATTATAAAAAAGGTTT+TGG + chr8_1:52673792-52673811 Msa1200260:intron 10.0%
!!! TATATTATAAAAAAGGTTTT+GGG + chr8_1:52673793-52673812 Msa1200260:intron 10.0%
!!! AAATTTTATATACAAAAACA+GGG - chr8_1:52674276-52674295 None:intergenic 10.0%
!!! AAAATTTTATATACAAAAAC+AGG - chr8_1:52674277-52674296 None:intergenic 10.0%
!!! CAAATAAAAATCTAATTTTT+TGG + chr8_1:52674710-52674729 Msa1200260:intron 10.0%
!! AATATAAAAAAATACATTCT+TGG + chr8_1:52675987-52676006 Msa1200260:intron 10.0%
!!! TTTGAATAGAATTATTGATT+TGG + chr8_1:52671916-52671935 Msa1200260:intron 15.0%
!!! ATTTTAACTAATTATAGACT+TGG - chr8_1:52672028-52672047 None:intergenic 15.0%
!!! ATTTTGGAAAAGTTAAATTA+TGG + chr8_1:52672439-52672458 Msa1200260:intron 15.0%
!!! ATCAATATTATTTTTTTTCC+TGG + chr8_1:52672713-52672732 Msa1200260:intron 15.0%
!! AAAAAAACCAAAACATAAAT+TGG - chr8_1:52673390-52673409 None:intergenic 15.0%
!! TTAAACTAATATCGTATAAT+AGG - chr8_1:52673654-52673673 None:intergenic 15.0%
!! GACAAAAAATGAAATTTATA+TGG + chr8_1:52674194-52674213 Msa1200260:intron 15.0%
!!! TAAAAATCTAATTTTTTGGA+TGG + chr8_1:52674714-52674733 Msa1200260:intron 15.0%
!! TTTAAATGAAAAATCAAGTT+AGG + chr8_1:52676116-52676135 Msa1200260:intron 15.0%
!! TTAAATGAAAAATCAAGTTA+GGG + chr8_1:52676117-52676136 Msa1200260:intron 15.0%
!!! GAATTTTTTAAGATCTTTTT+AGG - chr8_1:52677162-52677181 None:intergenic 15.0%
!! AAAGATCTTAAAAAATTCAA+AGG + chr8_1:52677164-52677183 Msa1200260:intron 15.0%
!! TTAAAAAGTGGTTTATATTT+GGG - chr8_1:52677351-52677370 None:intergenic 15.0%
!! TTTAAAAAGTGGTTTATATT+TGG - chr8_1:52677352-52677371 None:intergenic 15.0%
!!! TGATTAAACAATTTTCTATT+GGG + chr8_1:52678061-52678080 Msa1200260:intron 15.0%
!! ATAAAATTCATCAAAAATAG+CGG - chr8_1:52678436-52678455 None:intergenic 15.0%
!!! TATTTTTGATGAATTTTATC+CGG + chr8_1:52678437-52678456 Msa1200260:intron 15.0%
!! GATAAAAATACAATATGTAA+TGG - chr8_1:52679392-52679411 None:intergenic 15.0%
!!! TAGTCTTTAAAAAAAAAACA+GGG + chr8_1:52680422-52680441 Msa1200260:intron 15.0%
!!! TTAGAATTAAAAGTATATGA+AGG - chr8_1:52680455-52680474 None:intergenic 15.0%
!!! TATGAATGTTTAGAAATTTT+CGG + chr8_1:52680687-52680706 Msa1200260:intron 15.0%
!!! TTTTGTTAGTATTCTTAAAC+AGG + chr8_1:52671611-52671630 Msa1200260:CDS 20.0%
!!! AGTTAGTTTAAGTTTTGATT+TGG + chr8_1:52671709-52671728 Msa1200260:intron 20.0%
!!! GTTTTTGAATAGAATTGATT+TGG + chr8_1:52672540-52672559 Msa1200260:intron 20.0%
!! TCATAGTCAAATTAAGATTT+GGG + chr8_1:52672685-52672704 Msa1200260:intron 20.0%
!!! TTAAAATTGCTTCTTATTTG+AGG + chr8_1:52672843-52672862 Msa1200260:intron 20.0%
!! AATAATATATCTGTTTGTAC+CGG - chr8_1:52673764-52673783 None:intergenic 20.0%
!!! TATTTTATAATGTAGTTGCA+GGG - chr8_1:52674351-52674370 None:intergenic 20.0%
!!! ATATTTTATAATGTAGTTGC+AGG - chr8_1:52674352-52674371 None:intergenic 20.0%
!!! AATTAAGATCTTTTTCTGTA+TGG + chr8_1:52674942-52674961 Msa1200260:intron 20.0%
!! TTCTAATGATGAAATTGTTA+AGG + chr8_1:52675512-52675531 Msa1200260:CDS 20.0%
!! TGAAATTTCTCGATTAAATA+AGG - chr8_1:52675623-52675642 None:intergenic 20.0%
!! ATCTTAAGAATGTAATTAGT+AGG - chr8_1:52675862-52675881 None:intergenic 20.0%
!!! AAATAAATATGCTATTTACG+TGG - chr8_1:52675959-52675978 None:intergenic 20.0%
!! TAAATGAAAAATCAAGTTAG+GGG + chr8_1:52676118-52676137 Msa1200260:intron 20.0%
!! ATTCTATGAAATGACAATTA+AGG + chr8_1:52676395-52676414 Msa1200260:intron 20.0%
!!! ACACAAATGATTTTTATGAT+TGG + chr8_1:52676456-52676475 Msa1200260:intron 20.0%
!! AAACAATTAAAGATCTGAAA+TGG - chr8_1:52676688-52676707 None:intergenic 20.0%
!! ATCTTAAAAAATTCAAAGGT+TGG + chr8_1:52677168-52677187 Msa1200260:intron 20.0%
!! GTATCTAGTAATTTAAAAAG+TGG - chr8_1:52677363-52677382 None:intergenic 20.0%
!! TAACTATATACATGTACAAA+AGG + chr8_1:52677454-52677473 Msa1200260:intron 20.0%
!! AACTATATACATGTACAAAA+GGG + chr8_1:52677455-52677474 Msa1200260:intron 20.0%
!! TGACATATATTAAGAAAAGT+TGG - chr8_1:52677531-52677550 None:intergenic 20.0%
!! AATAAATATAACAGTCATGT+TGG - chr8_1:52677598-52677617 None:intergenic 20.0%
!! TGACTGTTATATTTATTGAA+TGG + chr8_1:52677601-52677620 Msa1200260:intron 20.0%
!! TGTTAAATGTGTTTAAATTG+TGG + chr8_1:52677878-52677897 Msa1200260:intron 20.0%
!!! CATTGTTATTGTGTTTTATT+AGG + chr8_1:52677906-52677925 Msa1200260:intron 20.0%
!! TATTAGAGCATAAAATGATA+GGG - chr8_1:52678020-52678039 None:intergenic 20.0%
!! ATATTAGAGCATAAAATGAT+AGG - chr8_1:52678021-52678040 None:intergenic 20.0%
!!! TATCATTTTATGCTCTAATA+TGG + chr8_1:52678020-52678039 Msa1200260:intron 20.0%
!!! CTGATTAAACAATTTTCTAT+TGG + chr8_1:52678060-52678079 Msa1200260:intron 20.0%
!! TAAAATTCATCAAAAATAGC+GGG - chr8_1:52678435-52678454 None:intergenic 20.0%
!! TATTATCATAAAGTGTATAC+TGG - chr8_1:52678530-52678549 None:intergenic 20.0%
!! GACAAAAAAAATTCTCAAAA+GGG - chr8_1:52678557-52678576 None:intergenic 20.0%
!! AGACAAAAAAAATTCTCAAA+AGG - chr8_1:52678558-52678577 None:intergenic 20.0%
!!! TAAAATAAATAAGGGTATGT+TGG - chr8_1:52678631-52678650 None:intergenic 20.0%
!!! ATCTTATAATGTCATTTTTC+AGG + chr8_1:52679507-52679526 Msa1200260:intron 20.0%
!! TATAATGACATTGTTAAAAC+AGG + chr8_1:52679945-52679964 Msa1200260:intron 20.0%
!!! GTAGTCTTTAAAAAAAAAAC+AGG + chr8_1:52680421-52680440 Msa1200260:intron 20.0%
!! TAAATTACAACTGACAAAAA+AGG - chr8_1:52680737-52680756 None:intergenic 20.0%
!!! AGTTGTAATTTATGATTTGT+TGG + chr8_1:52680745-52680764 Msa1200260:intron 20.0%
!! AAGGAAAAAAAATTATAGAC+AGG - chr8_1:52682468-52682487 None:intergenic 20.0%
!! AAAATTGTAGTGATAAATGA+TGG + chr8_1:52682549-52682568 Msa1200260:three_prime_UTR 20.0%
! AATCGTTAATACGATTCAAA+AGG + chr8_1:52671272-52671291 Msa1200260:CDS 25.0%
!! TTCGTTGATTAATCTACAAA+CGG - chr8_1:52671343-52671362 None:intergenic 25.0%
! TTATAAAATGTAGAACCGAT+CGG + chr8_1:52671767-52671786 Msa1200260:intron 25.0%
! AGTTAAAATGTAGAACCAAT+CGG + chr8_1:52672039-52672058 Msa1200260:intron 25.0%
!! TTTTGGCAAAATCTACATTT+TGG + chr8_1:52672154-52672173 Msa1200260:intron 25.0%
!! GTTTTTGAATAGACTTGATT+TGG + chr8_1:52672275-52672294 Msa1200260:intron 25.0%
!!! TTAGATGTTTTTACCATGAA+AGG + chr8_1:52672331-52672350 Msa1200260:intron 25.0%
!! TAGAACCAATAGTTATGTTT+TGG + chr8_1:52672384-52672403 Msa1200260:intron 25.0%
! GTCATAGTCAAATTAAGATT+TGG + chr8_1:52672684-52672703 Msa1200260:intron 25.0%
!! GTTTTCACATAAATTACACT+TGG + chr8_1:52672753-52672772 Msa1200260:intron 25.0%
!!! TTCTGTTAATTGTTTTACAG+TGG - chr8_1:52672807-52672826 None:intergenic 25.0%
! AAAACAAACCTTCAAAAACT+TGG - chr8_1:52673093-52673112 None:intergenic 25.0%
!! TAGTCATAATCTGAAATACA+TGG + chr8_1:52673226-52673245 Msa1200260:CDS 25.0%
!! AGTCATAATCTGAAATACAT+GGG + chr8_1:52673227-52673246 Msa1200260:CDS 25.0%
! TAGTAAGGAAAGATTGTTAA+AGG + chr8_1:52673476-52673495 Msa1200260:intron 25.0%
! GTTAAAGGAAAGAAAGTAAA+AGG + chr8_1:52673491-52673510 Msa1200260:intron 25.0%
!!! TTATTTGCCATAGTTTTTTC+CGG + chr8_1:52673742-52673761 Msa1200260:intron 25.0%
! TCAAACATAAACACATTGTT+TGG - chr8_1:52674017-52674036 None:intergenic 25.0%
!! CTTTTCATTATCCTCATTAT+AGG - chr8_1:52674103-52674122 None:intergenic 25.0%
! TTTAGACTTGTAACTAGTAA+TGG + chr8_1:52674301-52674320 Msa1200260:intron 25.0%
! CTCACTTAATAGGTAATAAT+TGG - chr8_1:52674564-52674583 None:intergenic 25.0%
! TGTATAAACCAATGATTACT+CGG - chr8_1:52674919-52674938 None:intergenic 25.0%
! ATGCTCAAAAACTTTATTCA+TGG - chr8_1:52675038-52675057 None:intergenic 25.0%
! TCTATCCTATAACTTGAAAA+GGG - chr8_1:52676186-52676205 None:intergenic 25.0%
! TTCTATCCTATAACTTGAAA+AGG - chr8_1:52676187-52676206 None:intergenic 25.0%
! TGCTTGAAATAAAAAGAGAT+AGG + chr8_1:52676420-52676439 Msa1200260:intron 25.0%
! GCTTGAAATAAAAAGAGATA+GGG + chr8_1:52676421-52676440 Msa1200260:intron 25.0%
!!! TTTTCCAATTGATTTGAACA+GGG - chr8_1:52676712-52676731 None:intergenic 25.0%
!!! TTTTTCCAATTGATTTGAAC+AGG - chr8_1:52676713-52676732 None:intergenic 25.0%
! ATTAATCAATTACATTGCCT+TGG + chr8_1:52676812-52676831 Msa1200260:intron 25.0%
! GAAGTAACTGATTATTATCT+TGG + chr8_1:52676863-52676882 Msa1200260:intron 25.0%
!!! TTGCTTTTTTACTTTGTCTT+TGG + chr8_1:52676930-52676949 Msa1200260:intron 25.0%
! ATCACAATTGAAGATCAAAT+TGG + chr8_1:52677019-52677038 Msa1200260:intron 25.0%
!! TTATTGACTGTTCAAGTTAT+TGG - chr8_1:52677120-52677139 None:intergenic 25.0%
! ACACTTAGTGGTATTAATTA+GGG - chr8_1:52677411-52677430 None:intergenic 25.0%
! AATATATGTCAAAACTACAC+AGG + chr8_1:52677540-52677559 Msa1200260:intron 25.0%
! ATATATGTCAAAACTACACA+GGG + chr8_1:52677541-52677560 Msa1200260:intron 25.0%
! TAAAACACAATAACAATGAC+TGG - chr8_1:52677904-52677923 None:intergenic 25.0%
!!! TAACTTATTGTTTGTTGTGA+AGG + chr8_1:52678086-52678105 Msa1200260:intron 25.0%
!! GGTATTTGCTGAAAAAATTT+AGG + chr8_1:52678185-52678204 Msa1200260:intron 25.0%
! CTCTCATTTAACAATATCAT+TGG - chr8_1:52678336-52678355 None:intergenic 25.0%
! ATGTACTTGAAAATACCAAA+GGG - chr8_1:52678594-52678613 None:intergenic 25.0%
! AATGTACTTGAAAATACCAA+AGG - chr8_1:52678595-52678614 None:intergenic 25.0%
!!! TTCTCGTTATTTTTGCAAAA+GGG + chr8_1:52678778-52678797 Msa1200260:intron 25.0%
! AGAAAGCTAGAAGAATAAAA+TGG + chr8_1:52678996-52679015 Msa1200260:intron 25.0%
!!! ATATGTAATGGTTTGTTTCA+AGG - chr8_1:52679380-52679399 None:intergenic 25.0%
!!! TTATAATGTCATTTTTCAGG+TGG + chr8_1:52679510-52679529 Msa1200260:intron 25.0%
! TTTCAGCATAAAACAAATAC+AGG - chr8_1:52679567-52679586 None:intergenic 25.0%
!! TTTTATGCTGAAATTTGAGT+GGG + chr8_1:52679574-52679593 Msa1200260:intron 25.0%
! TATGAATTACAAGCTGTTAT+TGG + chr8_1:52679701-52679720 Msa1200260:CDS 25.0%
! TAAAATATAGCAGAAGTCTA+TGG - chr8_1:52680248-52680267 None:intergenic 25.0%
! AATTCAATTCTTTGACGATT+TGG - chr8_1:52680564-52680583 None:intergenic 25.0%
!! AATGTTTAGAAATTTTCGGT+CGG + chr8_1:52680691-52680710 Msa1200260:intron 25.0%
!! GAATCAAATTTTCAACCATT+TGG + chr8_1:52680804-52680823 Msa1200260:intron 25.0%
! ATATACATTGTGATCTAGAA+TGG + chr8_1:52682178-52682197 Msa1200260:three_prime_UTR 25.0%
!! ATTGCATTTTACACTTTCTT+TGG + chr8_1:52682370-52682389 Msa1200260:three_prime_UTR 25.0%
! GAAAAAAAATTATAGACAGG+TGG - chr8_1:52682465-52682484 None:intergenic 25.0%
! AAGAATGAAAACATCAATCA+TGG - chr8_1:52682611-52682630 None:intergenic 25.0%
!! TGATTGATGTTTTCATTCTT+CGG + chr8_1:52682611-52682630 Msa1200260:three_prime_UTR 25.0%
!! AATAACACTGACTGTGTTTT+TGG - chr8_1:52670692-52670711 None:intergenic 30.0%
TGAATGTGATGTGTGAATTT+GGG - chr8_1:52670799-52670818 None:intergenic 30.0%
ATGAATGTGATGTGTGAATT+TGG - chr8_1:52670800-52670819 None:intergenic 30.0%
!! ATTCACCGATTGATTTGATT+AGG - chr8_1:52670990-52671009 None:intergenic 30.0%
!! ATCATCGTGAGTCATTTTAA+CGG - chr8_1:52671178-52671197 None:intergenic 30.0%
TCGCTTATAAGATCAAACAA+AGG - chr8_1:52671558-52671577 None:intergenic 30.0%
CTAACAACAAGATCCTTATA+CGG - chr8_1:52671591-52671610 None:intergenic 30.0%
! TTTTGTCAGAAACTACACTT+TGG + chr8_1:52671833-52671852 Msa1200260:intron 30.0%
! TTCATGCATGTTTGGAATAA+TGG - chr8_1:52671884-52671903 None:intergenic 30.0%
TTTGGTTAGAATTGAGTTTG+AGG + chr8_1:52671934-52671953 Msa1200260:intron 30.0%
ATTACTACTAAGTGCATGTT+TGG + chr8_1:52672090-52672109 Msa1200260:intron 30.0%
TAAGTGCATGTTTGGATTAA+CGG + chr8_1:52672098-52672117 Msa1200260:intron 30.0%
TGATGAGTTTGACAAAATCA+CGG - chr8_1:52672204-52672223 None:intergenic 30.0%
TCAAGTCTATTCAAAAACCA+TGG - chr8_1:52672273-52672292 None:intergenic 30.0%
CTAAATCAAACTTCCTTTCA+TGG - chr8_1:52672347-52672366 None:intergenic 30.0%
ACTCACCAAAACATAACTAT+TGG - chr8_1:52672392-52672411 None:intergenic 30.0%
ACTATGACTAGAGACATAAA+AGG - chr8_1:52672672-52672691 None:intergenic 30.0%
TGTAATTTATGTGAAAACCC+AGG - chr8_1:52672751-52672770 None:intergenic 30.0%
CTGAAAATTCTTGCATTGTT+GGG + chr8_1:52672897-52672916 Msa1200260:CDS 30.0%
CCTAATTATATCGCCAATAA+CGG - chr8_1:52672958-52672977 None:intergenic 30.0%
TATTGGCGATATAATTAGGA+AGG + chr8_1:52672959-52672978 Msa1200260:CDS 30.0%
ATTGGCGATATAATTAGGAA+GGG + chr8_1:52672960-52672979 Msa1200260:CDS 30.0%
GTGATTCATCAAGTAACATA+GGG + chr8_1:52672982-52673001 Msa1200260:CDS 30.0%
! GTTGTACATGTTTTTCCATT+AGG + chr8_1:52673148-52673167 Msa1200260:intron 30.0%
! TGCATTGCCAATTTATGTTT+TGG + chr8_1:52673380-52673399 Msa1200260:intron 30.0%
GGATGAGAAAATAAAGTGAA+AGG + chr8_1:52673448-52673467 Msa1200260:intron 30.0%
AAGTGAAAGGAAAGATAGTA+AGG + chr8_1:52673461-52673480 Msa1200260:intron 30.0%
! AGAAAGTGAGAGAATTTTGA+TGG + chr8_1:52673523-52673542 Msa1200260:intron 30.0%
!! AGAGAATTTTGATGGTTGTT+TGG + chr8_1:52673531-52673550 Msa1200260:intron 30.0%
GAAAGTGAATAGAAAGTGAA+AGG + chr8_1:52673561-52673580 Msa1200260:intron 30.0%
TAAAAACTTTCTTTCCTGCT+AGG + chr8_1:52673969-52673988 Msa1200260:intron 30.0%
TTCCTTTAGTGTATGTTCTA+TGG + chr8_1:52674059-52674078 Msa1200260:intron 30.0%
TTCCATAGAACATACACTAA+AGG - chr8_1:52674064-52674083 None:intergenic 30.0%
AATGATTAAACGCAAAGTAG+TGG - chr8_1:52674594-52674613 None:intergenic 30.0%
TTATTTGTACTGCAAAGCTT+GGG - chr8_1:52674697-52674716 None:intergenic 30.0%
TTTATTTGTACTGCAAAGCT+TGG - chr8_1:52674698-52674717 None:intergenic 30.0%
TGATCATGTACTCAATCATA+CGG - chr8_1:52674828-52674847 None:intergenic 30.0%
!! GAGTAATCATTGGTTTATAC+AGG + chr8_1:52674918-52674937 Msa1200260:CDS 30.0%
!! AATAAAGTTTTTGAGCATGC+TGG + chr8_1:52675040-52675059 Msa1200260:CDS 30.0%
TGGAGATCTTGTGAATATTA+AGG + chr8_1:52675060-52675079 Msa1200260:CDS 30.0%
AGGTTGCACATAATTTAATG+CGG + chr8_1:52675080-52675099 Msa1200260:CDS 30.0%
GGGAAACTATAAAACTTAAG+TGG - chr8_1:52675335-52675354 None:intergenic 30.0%
TTCTTGGAAAGTAAAGAAGT+GGG - chr8_1:52675355-52675374 None:intergenic 30.0%
TTTCTTGGAAAGTAAAGAAG+TGG - chr8_1:52675356-52675375 None:intergenic 30.0%
ACTTTCCAAGAAATTAGATC+TGG + chr8_1:52675363-52675382 Msa1200260:intron 30.0%
ACAAACCAGATCTAATTTCT+TGG - chr8_1:52675371-52675390 None:intergenic 30.0%
!! TAATCTTTAGTGCTGATTAC+AGG + chr8_1:52675395-52675414 Msa1200260:intron 30.0%
CTGATTACAGGTTATTTGTT+GGG + chr8_1:52675407-52675426 Msa1200260:intron 30.0%
TTCATCATTAGAATATGCCT+CGG - chr8_1:52675505-52675524 None:intergenic 30.0%
! AGCCAACCTTTTACATATAA+AGG + chr8_1:52675575-52675594 Msa1200260:intron 30.0%
CTCCTTTATATGTAAAAGGT+TGG - chr8_1:52675580-52675599 None:intergenic 30.0%
GTCTCTCCTTTATATGTAAA+AGG - chr8_1:52675584-52675603 None:intergenic 30.0%
ATATAAAGGAGAGACCATAA+AGG + chr8_1:52675589-52675608 Msa1200260:intron 30.0%
! ATAAGGATTAGTGACCTTTA+TGG - chr8_1:52675606-52675625 None:intergenic 30.0%
!!! TTCTTGTTTTCCTTTGCTTT+TGG + chr8_1:52675663-52675682 Msa1200260:intron 30.0%
GATATCATTACCAAAAGCAA+AGG - chr8_1:52675676-52675695 None:intergenic 30.0%
! GTAAAACTGACAACGATTTT+AGG - chr8_1:52675763-52675782 None:intergenic 30.0%
GCTAAATAAATATGCCGAAA+AGG - chr8_1:52676026-52676045 None:intergenic 30.0%
CAGAACAAAATTGCATTACA+TGG - chr8_1:52676068-52676087 None:intergenic 30.0%
TTTGTTCTGATTGATTGCAT+TGG + chr8_1:52676079-52676098 Msa1200260:intron 30.0%
CTATCCTATAACTTGAAAAG+GGG - chr8_1:52676185-52676204 None:intergenic 30.0%
TGCTTGATTTCTATTAGGTT+AGG - chr8_1:52676576-52676595 None:intergenic 30.0%
GTACTTGCTTGATTTCTATT+AGG - chr8_1:52676581-52676600 None:intergenic 30.0%
!! TTTCCAATTGATTTGAACAG+GGG - chr8_1:52676711-52676730 None:intergenic 30.0%
CCTAATTCTTCTGTAAACAA+AGG - chr8_1:52676739-52676758 None:intergenic 30.0%
! CCTTTGTTTACAGAAGAATT+AGG + chr8_1:52676736-52676755 Msa1200260:intron 30.0%
ACAGAAGAATTAGGATTAAG+AGG + chr8_1:52676745-52676764 Msa1200260:intron 30.0%
!!! TCTTAAGGATGTTTTGATGA+CGG - chr8_1:52677212-52677231 None:intergenic 30.0%
CAAGACTACACTTAATCTTA+AGG - chr8_1:52677227-52677246 None:intergenic 30.0%
CTTAAGATTAAGTGTAGTCT+TGG + chr8_1:52677225-52677244 Msa1200260:intron 30.0%
! GTATTAATTAGGGGTTGATT+TGG - chr8_1:52677401-52677420 None:intergenic 30.0%
CACTTAGTGGTATTAATTAG+GGG - chr8_1:52677410-52677429 None:intergenic 30.0%
GACACTTAGTGGTATTAATT+AGG - chr8_1:52677412-52677431 None:intergenic 30.0%
! TACACAGGGTGTTTATAAAA+AGG + chr8_1:52677555-52677574 Msa1200260:intron 30.0%
! ACACAGGGTGTTTATAAAAA+GGG + chr8_1:52677556-52677575 Msa1200260:intron 30.0%
TGTTTATAAAAAGGGATGGA+GGG + chr8_1:52677564-52677583 Msa1200260:intron 30.0%
! TTCTCTTTTCTAATTCTACG+CGG + chr8_1:52677678-52677697 Msa1200260:intron 30.0%
AATGCTTATGTAGTAGTATC+TGG + chr8_1:52677730-52677749 Msa1200260:intron 30.0%
AGTCATAATGCTTATGTAGT+AGG + chr8_1:52677724-52677743 Msa1200260:intron 30.0%
GATAAACATCAATGATCGAA+TGG - chr8_1:52677977-52677996 None:intergenic 30.0%
!! GTTTTGAGCACAATTTAACA+TGG + chr8_1:52678267-52678286 Msa1200260:intron 30.0%
TATCATAAAGTGTATACTGG+AGG - chr8_1:52678527-52678546 None:intergenic 30.0%
TGTACTTGAAAATACCAAAG+GGG - chr8_1:52678593-52678612 None:intergenic 30.0%
CGAGAACTAAGAAAATTGAT+AGG - chr8_1:52678764-52678783 None:intergenic 30.0%
!!! GTTCTCGTTATTTTTGCAAA+AGG + chr8_1:52678777-52678796 Msa1200260:intron 30.0%
!!! TATTTTTTGCAACAAGTGAC+TGG - chr8_1:52678966-52678985 None:intergenic 30.0%
AAAACAGAGCAGAAAAACAA+TGG - chr8_1:52679422-52679441 None:intergenic 30.0%
AGTTAAAAGCAAGCATTTCT+AGG - chr8_1:52679445-52679464 None:intergenic 30.0%
! GTTTTATGCTGAAATTTGAG+TGG + chr8_1:52679573-52679592 Msa1200260:intron 30.0%
! ATTACAAGCTGTTATTGGTT+TGG + chr8_1:52679706-52679725 Msa1200260:CDS 30.0%
AATTAGGGTCAAAATAGACA+TGG - chr8_1:52680033-52680052 None:intergenic 30.0%
AAAGGTGAGTATGTGAATTA+GGG - chr8_1:52680048-52680067 None:intergenic 30.0%
AAAAGGTGAGTATGTGAATT+AGG - chr8_1:52680049-52680068 None:intergenic 30.0%
! AATTCACATACTCACCTTTT+TGG + chr8_1:52680049-52680068 Msa1200260:intron 30.0%
!! TCAAGACATCACTTTTATCA+GGG + chr8_1:52680111-52680130 Msa1200260:intron 30.0%
AATTTCATGTCTGTTGTGTT+GGG - chr8_1:52680357-52680376 None:intergenic 30.0%
AAATTTCATGTCTGTTGTGT+TGG - chr8_1:52680358-52680377 None:intergenic 30.0%
TTCACTTCGAATTACAACTT+GGG + chr8_1:52680508-52680527 Msa1200260:intron 30.0%
ATTAATTGTCTCAACTCTCA+AGG + chr8_1:52680782-52680801 Msa1200260:intron 30.0%
! ACATGCTGAATCTTTTATGT+AGG + chr8_1:52680952-52680971 Msa1200260:intron 30.0%
TTACTGTAGAACTAATGCTT+GGG - chr8_1:52681753-52681772 None:intergenic 30.0%
TACAAATGCACCTGATATTA+TGG + chr8_1:52681792-52681811 Msa1200260:CDS 30.0%
ACAAATGCACCTGATATTAT+GGG + chr8_1:52681793-52681812 Msa1200260:CDS 30.0%
ATATTATGGGACTCTATAGT+GGG + chr8_1:52681806-52681825 Msa1200260:CDS 30.0%
TGCTAATGCTAAAGATTCTT+TGG + chr8_1:52681969-52681988 Msa1200260:CDS 30.0%
!! TACCAAAACACTGTTTCTTT+TGG + chr8_1:52682418-52682437 Msa1200260:three_prime_UTR 30.0%
! AACCAAAAGAAACAGTGTTT+TGG - chr8_1:52682423-52682442 None:intergenic 30.0%
TATCAAGCTTCTCATTGATA+AGG - chr8_1:52682487-52682506 None:intergenic 30.0%
AACATCAATCATGGAGAAAT+TGG - chr8_1:52682602-52682621 None:intergenic 30.0%
! ATTGTTTTCAGTTGCTCCAT+TGG - chr8_1:52670907-52670926 None:intergenic 35.0%
ATGGAGCAACTGAAAACAAT+CGG + chr8_1:52670907-52670926 Msa1200260:CDS 35.0%
CTCGACCTAATCAAATCAAT+CGG + chr8_1:52670982-52671001 Msa1200260:CDS 35.0%
!!! GTTTTAGGGTTTCGATTTCA+CGG - chr8_1:52671047-52671066 None:intergenic 35.0%
ACTCTTTCATCTTCCGTTTA+GGG - chr8_1:52671092-52671111 None:intergenic 35.0%
TACTCTTTCATCTTCCGTTT+AGG - chr8_1:52671093-52671112 None:intergenic 35.0%
GAAAGAAGCTCAACAACTAA+CGG - chr8_1:52671387-52671406 None:intergenic 35.0%
TCATAGCTTTCATCGGAAAT+CGG + chr8_1:52671449-52671468 Msa1200260:CDS 35.0%
! AGATTGTGTGATAATGATCC+TGG + chr8_1:52671510-52671529 Msa1200260:CDS 35.0%
! TGATAATGATCCTGGTGTTA+TGG + chr8_1:52671518-52671537 Msa1200260:CDS 35.0%
!! GATAATGATCCTGGTGTTAT+GGG + chr8_1:52671519-52671538 Msa1200260:CDS 35.0%
TTAAACAGGTAGCTGAACAT+AGG + chr8_1:52671625-52671644 Msa1200260:CDS 35.0%
TGGTGATAATCATAGCTCTT+AGG - chr8_1:52671654-52671673 None:intergenic 35.0%
ATAACAATCACCTGAACGAA+AGG - chr8_1:52671687-52671706 None:intergenic 35.0%
!!! GTATGTTTTGGTGAGTTTAG+CGG + chr8_1:52671789-52671808 Msa1200260:intron 35.0%
! GTTTGGAATAATGGTGAGTT+CGG - chr8_1:52671875-52671894 None:intergenic 35.0%
CACTTAGTAGTAATCACGTA+TGG - chr8_1:52672084-52672103 None:intergenic 35.0%
AGTTTGGCAAAATCATAGTG+TGG + chr8_1:52672123-52672142 Msa1200260:intron 35.0%
AAACACACTTGATGCATGTT+TGG - chr8_1:52672232-52672251 None:intergenic 35.0%
AAACATGCATCAAGTGTGTT+TGG + chr8_1:52672231-52672250 Msa1200260:intron 35.0%
TCCAAAATCAAATCGACACA+CGG - chr8_1:52672427-52672446 None:intergenic 35.0%
AAACACACATAGTGTGTGTT+TGG - chr8_1:52672498-52672517 None:intergenic 35.0%
AAACACACACTATGTGTGTT+TGG + chr8_1:52672497-52672516 Msa1200260:intron 35.0%
CATAAATTACACTTGGCAGA+AGG + chr8_1:52672760-52672779 Msa1200260:intron 35.0%
GCTGAAAATTCTTGCATTGT+TGG + chr8_1:52672896-52672915 Msa1200260:CDS 35.0%
CCGTTATTGGCGATATAATT+AGG + chr8_1:52672955-52672974 Msa1200260:CDS 35.0%
GGTGATTCATCAAGTAACAT+AGG + chr8_1:52672981-52673000 Msa1200260:CDS 35.0%
! TGTGATTGCCAAGTTTTTGA+AGG + chr8_1:52673082-52673101 Msa1200260:CDS 35.0%
TCAGATTATGACTATCACTC+TGG - chr8_1:52673220-52673239 None:intergenic 35.0%
TGATGTTGTTCTGCAATAAG+CGG - chr8_1:52673287-52673306 None:intergenic 35.0%
ATTGTGTGTTTCTTTCCCTT+TGG + chr8_1:52673417-52673436 Msa1200260:intron 35.0%
GTTTGTACCGGAAAAAACTA+TGG - chr8_1:52673752-52673771 None:intergenic 35.0%
TGCAATCTTTCTCTCCAATT+TGG + chr8_1:52673847-52673866 Msa1200260:intron 35.0%
TCTTTCAATCCTCTCCAAAT+TGG - chr8_1:52673864-52673883 None:intergenic 35.0%
AATTTGGAGAGGATTGAAAG+AGG + chr8_1:52673863-52673882 Msa1200260:intron 35.0%
!!! AAGAGGATTACTTTTTGTCG+TGG + chr8_1:52673880-52673899 Msa1200260:intron 35.0%
!!! AGAGGATTACTTTTTGTCGT+GGG + chr8_1:52673881-52673900 Msa1200260:intron 35.0%
AAGGAAAGAAGCTTTCTCAT+GGG - chr8_1:52673908-52673927 None:intergenic 35.0%
!! GTTTGGGTTGATTATGAACA+GGG - chr8_1:52673931-52673950 None:intergenic 35.0%
ATTGTGTGCTTTCATCGTTT+GGG - chr8_1:52673947-52673966 None:intergenic 35.0%
AATTGTGTGCTTTCATCGTT+TGG - chr8_1:52673948-52673967 None:intergenic 35.0%
ACTCGTAACTACCTATAATG+AGG + chr8_1:52674089-52674108 Msa1200260:intron 35.0%
AGACTTGTAACTAGTAATGG+AGG + chr8_1:52674304-52674323 Msa1200260:intron 35.0%
ATGCATCCAGACAATGATAT+TGG - chr8_1:52674450-52674469 None:intergenic 35.0%
GTCTTTCAGTCTTTCTAGAT+TGG - chr8_1:52674491-52674510 None:intergenic 35.0%
TGGCATGTTTCTCACTTAAT+AGG - chr8_1:52674574-52674593 None:intergenic 35.0%
!!! TCTAATTTTTTGGATGGTGC+AGG + chr8_1:52674720-52674739 Msa1200260:intron 35.0%
AATTTGCACCGAGTAATCAT+TGG + chr8_1:52674908-52674927 Msa1200260:CDS 35.0%
! GATCTTTTTCTGTATGGTCT+TGG + chr8_1:52674948-52674967 Msa1200260:intron 35.0%
GGTCTGTATAATCAAGTACA+AGG - chr8_1:52675017-52675036 None:intergenic 35.0%
GATACTAGCTCCTGTTTATT+TGG + chr8_1:52675178-52675197 Msa1200260:intron 35.0%
TAGAGACGTACCAAATAAAC+AGG - chr8_1:52675191-52675210 None:intergenic 35.0%
GTCATATGCATATTACTGAG+TGG + chr8_1:52675219-52675238 Msa1200260:intron 35.0%
GAGTCATATTTGCGCATTAT+TGG + chr8_1:52675266-52675285 Msa1200260:CDS 35.0%
GCTGATTACAGGTTATTTGT+TGG + chr8_1:52675406-52675425 Msa1200260:intron 35.0%
! AGGTTATTTGTTGGGTTCTT+GGG + chr8_1:52675415-52675434 Msa1200260:intron 35.0%
AATCTCACTGCTTATGTTTG+AGG + chr8_1:52675716-52675735 Msa1200260:intron 35.0%
TCAAGATTATCCTTTCTTCC+TGG + chr8_1:52675796-52675815 Msa1200260:intron 35.0%
GGACTAAAGAGAGATAGAAA+TGG - chr8_1:52675841-52675860 None:intergenic 35.0%
! AAATATGCTATTTACGTGGC+AGG - chr8_1:52675955-52675974 None:intergenic 35.0%
ACAAAATTGCATTACATGGC+AGG - chr8_1:52676064-52676083 None:intergenic 35.0%
AAAAATCAAGTTAGGGGAGA+GGG + chr8_1:52676124-52676143 Msa1200260:intron 35.0%
!!! TTCTCCCCTTTTCAAGTTAT+AGG + chr8_1:52676178-52676197 Msa1200260:intron 35.0%
TGGATGTAATGTAGATCACA+AGG - chr8_1:52676493-52676512 None:intergenic 35.0%
AACCTTTCTTGTTAAGCTTG+AGG - chr8_1:52676518-52676537 None:intergenic 35.0%
AATCCCAAATCTGTAACTAG+GGG - chr8_1:52676553-52676572 None:intergenic 35.0%
GAATCCCAAATCTGTAACTA+GGG - chr8_1:52676554-52676573 None:intergenic 35.0%
! TCTTGTTCTAATTTGCACTG+TGG - chr8_1:52676657-52676676 None:intergenic 35.0%
TTTCCCCTGTTCAAATCAAT+TGG + chr8_1:52676705-52676724 Msa1200260:intron 35.0%
! GCAATTCTAAAAGTTGCATG+AGG - chr8_1:52676914-52676933 None:intergenic 35.0%
ATCATCATCAGCTACAAGAA+TGG + chr8_1:52677262-52677281 Msa1200260:intron 35.0%
!! CCAAAAGGTGCTTATACAAA+GGG - chr8_1:52677315-52677334 None:intergenic 35.0%
! CCTTTGTATAAGCACCTTTT+GGG + chr8_1:52677313-52677332 Msa1200260:intron 35.0%
! CTTTGTATAAGCACCTTTTG+GGG + chr8_1:52677314-52677333 Msa1200260:intron 35.0%
ACCACTAAGTGTCTTGAAAT+AGG + chr8_1:52677419-52677438 Msa1200260:intron 35.0%
TCCTATTTCAAGACACTTAG+TGG - chr8_1:52677423-52677442 None:intergenic 35.0%
! AGGGTGTTTATAAAAAGGGA+TGG + chr8_1:52677560-52677579 Msa1200260:intron 35.0%
GTGTTTATAAAAAGGGATGG+AGG + chr8_1:52677563-52677582 Msa1200260:intron 35.0%
TTTCATTGTTGAGATTCCAG+TGG + chr8_1:52677655-52677674 Msa1200260:intron 35.0%
GAATTAGAAAAGAGAACCAC+TGG - chr8_1:52677674-52677693 None:intergenic 35.0%
AATGCTTATGTAGTAGGATC+TGG + chr8_1:52677776-52677795 Msa1200260:intron 35.0%
CCATAACTAGGAATCAAGAA+GGG - chr8_1:52677826-52677845 None:intergenic 35.0%
CCTTCTTGATTCCTAGTTAT+GGG + chr8_1:52677824-52677843 Msa1200260:intron 35.0%
ATTTCATCATGCCCATAACT+AGG - chr8_1:52677838-52677857 None:intergenic 35.0%
TTTGGTATGGTGATAAAGAC+GGG - chr8_1:52678303-52678322 None:intergenic 35.0%
CTTTGGTATGGTGATAAAGA+CGG - chr8_1:52678304-52678323 None:intergenic 35.0%
ATCATTGGAGTGCAATTCTT+TGG - chr8_1:52678321-52678340 None:intergenic 35.0%
AGCATGATATTGTGAAACCA+TGG + chr8_1:52678364-52678383 Msa1200260:intron 35.0%
!!! ATAGCGGGACATTGTTTTTT+CGG - chr8_1:52678420-52678439 None:intergenic 35.0%
! CTCTTTTTATAAGACCCCTT+TGG + chr8_1:52678576-52678595 Msa1200260:intron 35.0%
GGCAAAGATAAGACATGAAA+TGG - chr8_1:52678831-52678850 None:intergenic 35.0%
ATGTGCAGAAAAAATCTGCT+GGG - chr8_1:52678852-52678871 None:intergenic 35.0%
AATGTGCAGAAAAAATCTGC+TGG - chr8_1:52678853-52678872 None:intergenic 35.0%
GAGAATCAAATGCAAGTGTT+GGG - chr8_1:52678894-52678913 None:intergenic 35.0%
AGTAAGGCTCTTAATTCAAC+AGG - chr8_1:52678916-52678935 None:intergenic 35.0%
!! TGATGGTTGATGGTTATCTA+TGG + chr8_1:52679098-52679117 Msa1200260:intron 35.0%
ATGGAAGAGAGATGCAAAAA+AGG + chr8_1:52679117-52679136 Msa1200260:intron 35.0%
TTTCTGTGCTTTCATCTAAC+CGG + chr8_1:52679170-52679189 Msa1200260:intron 35.0%
TTCTGGTCTCAAAATGAAAC+AGG - chr8_1:52679207-52679226 None:intergenic 35.0%
ATCATAGCAAAATTGCATCC+AGG - chr8_1:52679266-52679285 None:intergenic 35.0%
!!! ATGTCATTTTTCAGGTGGAT+AGG + chr8_1:52679515-52679534 Msa1200260:intron 35.0%
! CAACGACGTTTTCACTATTT+TGG + chr8_1:52679918-52679937 Msa1200260:intron 35.0%
!! ACCTTTTTGGTCTTCTGATT+CGG + chr8_1:52680062-52680081 Msa1200260:intron 35.0%
!! CTCAAGACATCACTTTTATC+AGG + chr8_1:52680110-52680129 Msa1200260:intron 35.0%
!! CAAGACATCACTTTTATCAG+GGG + chr8_1:52680112-52680131 Msa1200260:intron 35.0%
CTCTATTAGACAATGACTGT+TGG + chr8_1:52680221-52680240 Msa1200260:intron 35.0%
TTTCAGTTCAATGCTCTGAT+GGG + chr8_1:52680278-52680297 Msa1200260:intron 35.0%
ATGCAAAGTTATGGTCATTC+AGG - chr8_1:52680305-52680324 None:intergenic 35.0%
!! CATTGGTTCATGCAAAGTTA+TGG - chr8_1:52680314-52680333 None:intergenic 35.0%
TCATGTAAGAAACACTGCAT+TGG - chr8_1:52680331-52680350 None:intergenic 35.0%
CTTCACTTCGAATTACAACT+TGG + chr8_1:52680507-52680526 Msa1200260:intron 35.0%
! TTTGAAGTTGAACCCCATTA+TGG + chr8_1:52680584-52680603 Msa1200260:intron 35.0%
TTGAAGTTGAACCCCATTAT+GGG + chr8_1:52680585-52680604 Msa1200260:intron 35.0%
! TGCTGAATCTTTTATGTAGG+TGG + chr8_1:52680955-52680974 Msa1200260:intron 35.0%
! GAAACTGGAGTAACTTTTGA+TGG - chr8_1:52681166-52681185 None:intergenic 35.0%
! ATTTTGGGCAGTAGAATTTG+AGG - chr8_1:52681365-52681384 None:intergenic 35.0%
AAGGTTCCAAAAGCTAATGT+TGG + chr8_1:52681556-52681575 Msa1200260:CDS 35.0%
CTTACTGTAGAACTAATGCT+TGG - chr8_1:52681754-52681773 None:intergenic 35.0%
CTATAGAGTCCCATAATATC+AGG - chr8_1:52681805-52681824 None:intergenic 35.0%
GATATTATGGGACTCTATAG+TGG + chr8_1:52681805-52681824 Msa1200260:CDS 35.0%
TATTATGGGACTCTATAGTG+GGG + chr8_1:52681807-52681826 Msa1200260:CDS 35.0%
! TGCTAAAGATTCTTTGGAGA+AGG + chr8_1:52681975-52681994 Msa1200260:CDS 35.0%
GTTTACAACTTTCCTCTCAT+CGG - chr8_1:52682076-52682095 None:intergenic 35.0%
AGGAAAGTTGTAAACCATAC+TGG + chr8_1:52682081-52682100 Msa1200260:three_prime_UTR 35.0%
AAAGTTGTAAACCATACTGG+TGG + chr8_1:52682084-52682103 Msa1200260:three_prime_UTR 35.0%
GCATATATCAGATAGCCAAT+TGG - chr8_1:52682147-52682166 None:intergenic 35.0%
ATATGGAATCACCCAATTCT+TGG - chr8_1:52682217-52682236 None:intergenic 35.0%
TTAGTCATCATTCCTGGATA+TGG - chr8_1:52682234-52682253 None:intergenic 35.0%
! ACACTTTCTTTGGAAGTTCA+AGG + chr8_1:52682380-52682399 Msa1200260:three_prime_UTR 35.0%
!! GAGAAATTGGTCTTCAACAA+AGG - chr8_1:52682589-52682608 None:intergenic 35.0%
!!! GTGTTTTTGGTACTTGGCAA+CGG - chr8_1:52670679-52670698 None:intergenic 40.0%
!!! CTGACTGTGTTTTTGGTACT+TGG - chr8_1:52670685-52670704 None:intergenic 40.0%
! GTGATGTGTGAATTTGGGTT+TGG - chr8_1:52670794-52670813 None:intergenic 40.0%
! ATTGGTTGTTACGGAGGTTT+TGG - chr8_1:52670889-52670908 None:intergenic 40.0%
AAAACCTCCGTAACAACCAA+TGG + chr8_1:52670888-52670907 Msa1200260:exon 40.0%
! AGTTGCTCCATTGGTTGTTA+CGG - chr8_1:52670898-52670917 None:intergenic 40.0%
!! GATTACGATTCGGTCTTCTT+CGG - chr8_1:52671025-52671044 None:intergenic 40.0%
! CGATTTCACGGATTACGATT+CGG - chr8_1:52671035-52671054 None:intergenic 40.0%
ATCTTCCGTTTAGGGATATC+TGG - chr8_1:52671084-52671103 None:intergenic 40.0%
CTTCTCTACGTTGAAATGCT+CGG + chr8_1:52671123-52671142 Msa1200260:CDS 40.0%
AATCTTCTCTCAAAACGCAC+CGG + chr8_1:52671198-52671217 Msa1200260:CDS 40.0%
CTCAACAACTAACGGCAAAA+CGG - chr8_1:52671379-52671398 None:intergenic 40.0%
TTGTTGAGCTTCTTTCGCAT+GGG + chr8_1:52671391-52671410 Msa1200260:CDS 40.0%
! CACATCTTGTGGCGAATTTT+AGG + chr8_1:52671484-52671503 Msa1200260:CDS 40.0%
ACAAGATCCTTATACGGACT+CGG - chr8_1:52671585-52671604 None:intergenic 40.0%
CTATGATTATCACCAGATGC+CGG + chr8_1:52671659-52671678 Msa1200260:CDS 40.0%
! TAGAACCGATCGGTATGTTT+TGG + chr8_1:52671777-52671796 Msa1200260:intron 40.0%
ACTCACCAAAACATACCGAT+CGG - chr8_1:52671785-52671804 None:intergenic 40.0%
GTTTGGATTAACGGTGAGTT+TGG + chr8_1:52672107-52672126 Msa1200260:intron 40.0%
CAAAATCATAGTGTGGCAGT+GGG + chr8_1:52672130-52672149 Msa1200260:intron 40.0%
TGAGTTTGACAAAATCACGG+AGG - chr8_1:52672201-52672220 None:intergenic 40.0%
TCAAGTGTGTTTGGATGAGT+TGG + chr8_1:52672240-52672259 Msa1200260:intron 40.0%
!!! ACCGTGTGTCGATTTGATTT+TGG + chr8_1:52672423-52672442 Msa1200260:intron 40.0%
GGATGAGTGCTTGATAAACA+TGG + chr8_1:52672518-52672537 Msa1200260:intron 40.0%
TCCTGGTAGAAATAAACACC+TGG + chr8_1:52672730-52672749 Msa1200260:intron 40.0%
CCTGGTAGAAATAAACACCT+GGG + chr8_1:52672731-52672750 Msa1200260:intron 40.0%
ATTCTTGCATTGTTGGGAAG+TGG + chr8_1:52672903-52672922 Msa1200260:CDS 40.0%
GAACACATGTACACCGTTAT+TGG + chr8_1:52672942-52672961 Msa1200260:CDS 40.0%
CAACTTGGGATTGGGATATA+TGG - chr8_1:52673045-52673064 None:intergenic 40.0%
GCTTCTAACAACTTGGGATT+GGG - chr8_1:52673053-52673072 None:intergenic 40.0%
AGCTTCTAACAACTTGGGAT+TGG - chr8_1:52673054-52673073 None:intergenic 40.0%
TTGTCTCTGTTGTGTTTGTG+TGG + chr8_1:52673194-52673213 Msa1200260:intron 40.0%
!! TACATGGGTATTGATGCTCT+CGG + chr8_1:52673242-52673261 Msa1200260:CDS 40.0%
TACCTCTAAGCAGTCAATGA+CGG - chr8_1:52673315-52673334 None:intergenic 40.0%
! TCATTGACTGCTTAGAGGTA+AGG + chr8_1:52673315-52673334 Msa1200260:intron 40.0%
!! TCTTTCCCTTTGGCTTTGTT+TGG + chr8_1:52673427-52673446 Msa1200260:intron 40.0%
CTCATCCAAACAAAGCCAAA+GGG - chr8_1:52673435-52673454 None:intergenic 40.0%
TCTCATCCAAACAAAGCCAA+AGG - chr8_1:52673436-52673455 None:intergenic 40.0%
TCTTTCTCTCCAATTTGGAG+AGG + chr8_1:52673852-52673871 Msa1200260:intron 40.0%
GAAGGAAAGAAGCTTTCTCA+TGG - chr8_1:52673909-52673928 None:intergenic 40.0%
!! CGTTTGGGTTGATTATGAAC+AGG - chr8_1:52673932-52673951 None:intergenic 40.0%
! TTGTTTGGAACAGCAGAATG+TGG - chr8_1:52674002-52674021 None:intergenic 40.0%
! TTGTAACTAGTAATGGAGGC+CGG + chr8_1:52674308-52674327 Msa1200260:intron 40.0%
CATTCTCTTGCTGAACTTGT+TGG - chr8_1:52674386-52674405 None:intergenic 40.0%
! GCAGGTTTTCAAACTCAAGA+CGG - chr8_1:52674428-52674447 None:intergenic 40.0%
AACCTGCCAATATCATTGTC+TGG + chr8_1:52674441-52674460 Msa1200260:intron 40.0%
ATCCAGACAATGATATTGGC+AGG - chr8_1:52674446-52674465 None:intergenic 40.0%
ATGTTTCTCACAGTCAGACT+AGG - chr8_1:52674540-52674559 None:intergenic 40.0%
! TCTATCGCATGTCAGCTTTT+AGG + chr8_1:52674645-52674664 Msa1200260:intron 40.0%
!! TTTCGCTTCAAAGTATCGTC+AGG - chr8_1:52674748-52674767 None:intergenic 40.0%
AATGACCAAGTCTTCCAATG+TGG + chr8_1:52674789-52674808 Msa1200260:CDS 40.0%
CACACATCGAGAAGCTATAT+AGG - chr8_1:52674875-52674894 None:intergenic 40.0%
CTATATAGCTTCTCGATGTG+TGG + chr8_1:52674873-52674892 Msa1200260:CDS 40.0%
TTAATGCGGTTGATTGCAGA+AGG + chr8_1:52675094-52675113 Msa1200260:CDS 40.0%
AGAAACACTGATGGAAGCTT+TGG - chr8_1:52675296-52675315 None:intergenic 40.0%
AGTACCTGAAGAAACACTGA+TGG - chr8_1:52675305-52675324 None:intergenic 40.0%
! CAGGTTATTTGTTGGGTTCT+TGG + chr8_1:52675414-52675433 Msa1200260:intron 40.0%
! GGTTATTTGTTGGGTTCTTG+GGG + chr8_1:52675416-52675435 Msa1200260:intron 40.0%
ATTCCGCTTCCTATATCACT+GGG + chr8_1:52675463-52675482 Msa1200260:CDS 40.0%
GCATAACTTCCCAGTGATAT+AGG - chr8_1:52675475-52675494 None:intergenic 40.0%
AGATAGAAATGGATCCAGCA+CGG - chr8_1:52675830-52675849 None:intergenic 40.0%
CTGCAGAATCTACAAGAAAC+AGG - chr8_1:52675915-52675934 None:intergenic 40.0%
TTGCATTGGATGAGCAATGT+TGG + chr8_1:52676093-52676112 Msa1200260:intron 40.0%
GAAAAATCAAGTTAGGGGAG+AGG + chr8_1:52676123-52676142 Msa1200260:intron 40.0%
TTCTTGTTAAGCTTGAGGAC+TGG - chr8_1:52676513-52676532 None:intergenic 40.0%
GTCCTCAAGCTTAACAAGAA+AGG + chr8_1:52676513-52676532 Msa1200260:intron 40.0%
ATCCCAAATCTGTAACTAGG+GGG - chr8_1:52676552-52676571 None:intergenic 40.0%
GGAATCCCAAATCTGTAACT+AGG - chr8_1:52676555-52676574 None:intergenic 40.0%
AAGTTAGCATCAGCTATCCA+AGG - chr8_1:52676832-52676851 None:intergenic 40.0%
! GGTTCTGGTCTCAAAGAAAT+TGG - chr8_1:52676893-52676912 None:intergenic 40.0%
CTAAAAGTTGCATGAGGTTC+TGG - chr8_1:52676908-52676927 None:intergenic 40.0%
! AAGGTGCTTATACAAAGGGA+CGG - chr8_1:52677311-52677330 None:intergenic 40.0%
! CCCTTTGTATAAGCACCTTT+TGG + chr8_1:52677312-52677331 Msa1200260:intron 40.0%
!! CCCAAAAGGTGCTTATACAA+AGG - chr8_1:52677316-52677335 None:intergenic 40.0%
! GGACAACTATTTTCCCCAAA+AGG - chr8_1:52677330-52677349 None:intergenic 40.0%
! TTCTAATTCTACGCGGATTG+TGG + chr8_1:52677685-52677704 Msa1200260:intron 40.0%
GTAGGATCTGGTGATTGTAA+TGG + chr8_1:52677788-52677807 Msa1200260:intron 40.0%
CCCTTCTTGATTCCTAGTTA+TGG + chr8_1:52677823-52677842 Msa1200260:intron 40.0%
CCCATAACTAGGAATCAAGA+AGG - chr8_1:52677827-52677846 None:intergenic 40.0%
! TATGCGTTTGAAATAGCAGC+TGG + chr8_1:52678138-52678157 Msa1200260:CDS 40.0%
! ATGCGTTTGAAATAGCAGCT+GGG + chr8_1:52678139-52678158 Msa1200260:CDS 40.0%
GAAAGTGGATATGCTATCTG+AGG + chr8_1:52678164-52678183 Msa1200260:CDS 40.0%
AAAGCCAGTGACAATAGAAC+AGG - chr8_1:52678224-52678243 None:intergenic 40.0%
!! TTGTCACTGGCTTTCTACAA+TGG + chr8_1:52678230-52678249 Msa1200260:intron 40.0%
TGGAGTGCAATTCTTTGGTA+TGG - chr8_1:52678316-52678335 None:intergenic 40.0%
TGATATTGTGAAACCATGGC+TGG + chr8_1:52678368-52678387 Msa1200260:intron 40.0%
! TAAAGAGTGTAGAGCTGTTC+CGG - chr8_1:52678459-52678478 None:intergenic 40.0%
CCATTTAGCAAGCACAAAGA+AGG - chr8_1:52678486-52678505 None:intergenic 40.0%
! CCTTCTTTGTGCTTGCTAAA+TGG + chr8_1:52678483-52678502 Msa1200260:intron 40.0%
TGCAAAAGGGCCCTATAATT+AGG + chr8_1:52678791-52678810 Msa1200260:intron 40.0%
GCAAAAGGGCCCTATAATTA+GGG + chr8_1:52678792-52678811 Msa1200260:intron 40.0%
TACCTCCGTCCCTAATTATA+GGG - chr8_1:52678804-52678823 None:intergenic 40.0%
! GTGTTGGGACTAGTATAAGA+TGG - chr8_1:52678879-52678898 None:intergenic 40.0%
GGAGAATCAAATGCAAGTGT+TGG - chr8_1:52678895-52678914 None:intergenic 40.0%
TGACTGGTAGTAATGGTTAC+GGG - chr8_1:52678950-52678969 None:intergenic 40.0%
GTGACTGGTAGTAATGGTTA+CGG - chr8_1:52678951-52678970 None:intergenic 40.0%
CAACAAGTGACTGGTAGTAA+TGG - chr8_1:52678957-52678976 None:intergenic 40.0%
ACTGAGAGAGAGTGATTAAG+AGG + chr8_1:52679044-52679063 Msa1200260:intron 40.0%
AGATGCAAAAAAGGTCGAGA+GGG + chr8_1:52679126-52679145 Msa1200260:intron 40.0%
! AGGGTTTTCTACCTGTGTTT+AGG + chr8_1:52679145-52679164 Msa1200260:intron 40.0%
! GGGTTTTCTACCTGTGTTTA+GGG + chr8_1:52679146-52679165 Msa1200260:intron 40.0%
ATCCTGCAAATTCATGATCC+TGG + chr8_1:52679245-52679264 Msa1200260:intron 40.0%
ATCCAGGATCATGAATTTGC+AGG - chr8_1:52679250-52679269 None:intergenic 40.0%
ACAGAGCAGAAAAACAATGG+TGG - chr8_1:52679419-52679438 None:intergenic 40.0%
CAAACTGCAGTGTCAATCTT+TGG + chr8_1:52679631-52679650 Msa1200260:intron 40.0%
!! CTGTTATTGGTTTGGATGCA+CGG + chr8_1:52679714-52679733 Msa1200260:CDS 40.0%
!! TGTTATTGGTTTGGATGCAC+GGG + chr8_1:52679715-52679734 Msa1200260:CDS 40.0%
GGTCAACAGTAAACTGAAAC+TGG - chr8_1:52680012-52680031 None:intergenic 40.0%
TCCGAATCAGAAGACCAAAA+AGG - chr8_1:52680066-52680085 None:intergenic 40.0%
! AGCATTGAACTGAAAGGAAG+AGG - chr8_1:52680273-52680292 None:intergenic 40.0%
!! CATCAGAGCATTGAACTGAA+AGG - chr8_1:52680279-52680298 None:intergenic 40.0%
CTTTCAGTTCAATGCTCTGA+TGG + chr8_1:52680277-52680296 Msa1200260:intron 40.0%
GCATAAGCGTATCATGTGTT+GGG - chr8_1:52680397-52680416 None:intergenic 40.0%
AGCATAAGCGTATCATGTGT+TGG - chr8_1:52680398-52680417 None:intergenic 40.0%
CACATGATACGCTTATGCTT+AGG + chr8_1:52680399-52680418 Msa1200260:intron 40.0%
TTGAGACAATAACAGAGGCA+AGG + chr8_1:52680533-52680552 Msa1200260:intron 40.0%
TGAAGTTGAACCCCATTATG+GGG + chr8_1:52680586-52680605 Msa1200260:intron 40.0%
AACCATTTGGCTGTTGACAT+GGG + chr8_1:52680817-52680836 Msa1200260:intron 40.0%
CTCGTTGTACTAATGTGCTT+GGG + chr8_1:52680879-52680898 Msa1200260:intron 40.0%
CCTGCTGGATATAATCATTG+AGG - chr8_1:52680997-52681016 None:intergenic 40.0%
CCTCAATGATTATATCCAGC+AGG + chr8_1:52680994-52681013 Msa1200260:CDS 40.0%
TGAGGCTTATGAAGTTCCAA+AGG + chr8_1:52681132-52681151 Msa1200260:CDS 40.0%
GTGGGATTATCATCAGATAC+AGG + chr8_1:52681259-52681278 Msa1200260:CDS 40.0%
TCATCAGATACAGGATCATC+AGG + chr8_1:52681268-52681287 Msa1200260:CDS 40.0%
CATCAGATACAGGATCATCA+GGG + chr8_1:52681269-52681288 Msa1200260:CDS 40.0%
!! TTGATGGTGTTCAGAAGAAG+TGG + chr8_1:52681305-52681324 Msa1200260:CDS 40.0%
! TGATGGTGTTCAGAAGAAGT+GGG + chr8_1:52681306-52681325 Msa1200260:CDS 40.0%
! CATGCCATTCACTGGATTTT+GGG - chr8_1:52681380-52681399 None:intergenic 40.0%
! TCATGCCATTCACTGGATTT+TGG - chr8_1:52681381-52681400 None:intergenic 40.0%
GCTACGATTCAAGAAAGCAA+CGG + chr8_1:52681446-52681465 Msa1200260:CDS 40.0%
! CTAGTTGATGTTCTTCTCTC+AGG - chr8_1:52681532-52681551 None:intergenic 40.0%
AAGAACATCAACTAGCAGCA+AGG + chr8_1:52681537-52681556 Msa1200260:CDS 40.0%
TTGTGGAGGAGATTGTTGAT+TGG - chr8_1:52681647-52681666 None:intergenic 40.0%
AAGTCAAGCAAATCTTGTGG+AGG - chr8_1:52681661-52681680 None:intergenic 40.0%
! TCCACAAGATTTGCTTGACT+TGG + chr8_1:52681660-52681679 Msa1200260:CDS 40.0%
! CCACAAGATTTGCTTGACTT+GGG + chr8_1:52681661-52681680 Msa1200260:CDS 40.0%
! GTCCTTCTAGTTGCATGAAT+GGG - chr8_1:52681723-52681742 None:intergenic 40.0%
! AGTCCTTCTAGTTGCATGAA+TGG - chr8_1:52681724-52681743 None:intergenic 40.0%
! GCAAGTGGAGATCTTTTATC+CGG + chr8_1:52681871-52681890 Msa1200260:CDS 40.0%
! CAAGTGGAGATCTTTTATCC+GGG + chr8_1:52681872-52681891 Msa1200260:CDS 40.0%
ACCCTTCACAGATTGTGATA+CGG - chr8_1:52681950-52681969 None:intergenic 40.0%
AGCAAGTCTCTGAACAAGTT+GGG - chr8_1:52682045-52682064 None:intergenic 40.0%
AAGCAAGTCTCTGAACAAGT+TGG - chr8_1:52682046-52682065 None:intergenic 40.0%
! AACTTGTTCAGAGACTTGCT+TGG + chr8_1:52682045-52682064 Msa1200260:CDS 40.0%
CACAAGATATTCCACCAGTA+TGG - chr8_1:52682098-52682117 None:intergenic 40.0%
! ATCAGATAGCCAATTGGTTC+AGG - chr8_1:52682141-52682160 None:intergenic 40.0%
AATTGGGTGATTCCATATCC+AGG + chr8_1:52682219-52682238 Msa1200260:three_prime_UTR 40.0%
!!! CCTGTTTTAGTCATCATTCC+TGG - chr8_1:52682240-52682259 None:intergenic 40.0%
CCAGGAATGATGACTAAAAC+AGG + chr8_1:52682237-52682256 Msa1200260:three_prime_UTR 40.0%
! GTTGCATTGTATCCAGGTTT+TGG + chr8_1:52682305-52682324 Msa1200260:three_prime_UTR 40.0%
!! ATTGTATCCAGGTTTTGGTC+AGG + chr8_1:52682310-52682329 Msa1200260:three_prime_UTR 40.0%
CAATGAGAAGCTTGATACTG+CGG + chr8_1:52682490-52682509 Msa1200260:three_prime_UTR 40.0%
! TTTGGGTTTGGAGAGTGTGA+AGG - chr8_1:52670782-52670801 None:intergenic 45.0%
!!! TGTTACGGAGGTTTTGGATC+CGG - chr8_1:52670883-52670902 None:intergenic 45.0%
! TTCGGAGATTCGGCGTTTTA+GGG - chr8_1:52671061-52671080 None:intergenic 45.0%
!! GGATATCTGGTTCGGAGATT+CGG - chr8_1:52671071-52671090 None:intergenic 45.0%
CCGTTTAGGGATATCTGGTT+CGG - chr8_1:52671079-52671098 None:intergenic 45.0%
CCGAACCAGATATCCCTAAA+CGG + chr8_1:52671076-52671095 Msa1200260:CDS 45.0%
GTCGTTGAGGAACAGAGTAA+CGG - chr8_1:52671232-52671251 None:intergenic 45.0%
TAAGTGCAGCACAAACGACA+AGG - chr8_1:52671317-52671336 None:intergenic 45.0%
GTTGTTGAGCTTCTTTCGCA+TGG + chr8_1:52671390-52671409 Msa1200260:CDS 45.0%
TCTTTCGCATGGGAAAGAAG+CGG + chr8_1:52671401-52671420 Msa1200260:CDS 45.0%
AGAAGCGGTTAGGAAGAAAG+CGG + chr8_1:52671416-52671435 Msa1200260:CDS 45.0%
GGTTAGGAAGAAAGCGGTTA+TGG + chr8_1:52671422-52671441 Msa1200260:CDS 45.0%
TGGCGCTTCATAGCTTTCAT+CGG + chr8_1:52671442-52671461 Msa1200260:CDS 45.0%
TGGTGAGTTTAGCGGAATCA+TGG + chr8_1:52671797-52671816 Msa1200260:intron 45.0%
GCACACACTTCATGCATGTT+TGG - chr8_1:52671892-52671911 None:intergenic 45.0%
GCAAAATCATAGTGTGGCAG+TGG + chr8_1:52672129-52672148 Msa1200260:intron 45.0%
! ATAGTGTGGCAGTGGGATTT+TGG + chr8_1:52672137-52672156 Msa1200260:intron 45.0%
! GTGTGTTTGGATGAGTTGGA+TGG + chr8_1:52672244-52672263 Msa1200260:intron 45.0%
!! CCCAGGTGTTTATTTCTACC+AGG - chr8_1:52672734-52672753 None:intergenic 45.0%
TATGGAAGAGACACAGCGAA+TGG - chr8_1:52673027-52673046 None:intergenic 45.0%
GCAGCAGCTTCTAACAACTT+GGG - chr8_1:52673059-52673078 None:intergenic 45.0%
CAAGTTGTTAGAAGCTGCTG+CGG + chr8_1:52673058-52673077 Msa1200260:CDS 45.0%
CACATCACAACACAGCCTAA+TGG - chr8_1:52673166-52673185 None:intergenic 45.0%
! GGGTTGATTATGAACAGGGA+AGG - chr8_1:52673927-52673946 None:intergenic 45.0%
TTGGAACAGCAGAATGTGGA+AGG - chr8_1:52673998-52674017 None:intergenic 45.0%
CTCACAGTCAGACTAGGTAA+AGG - chr8_1:52674534-52674553 None:intergenic 45.0%
CACTTCCACATTGGAAGACT+TGG - chr8_1:52674797-52674816 None:intergenic 45.0%
GTCAACGATCACTTCCACAT+TGG - chr8_1:52674806-52674825 None:intergenic 45.0%
CGGTTGATTGCAGAAGGATT+TGG + chr8_1:52675100-52675119 Msa1200260:CDS 45.0%
GATTGCAGAAGGATTTGGAG+AGG + chr8_1:52675105-52675124 Msa1200260:CDS 45.0%
CGATCTCAGCTGACTATATG+CGG - chr8_1:52675140-52675159 None:intergenic 45.0%
TTACTGAGTGGAAGCTCTTC+TGG + chr8_1:52675231-52675250 Msa1200260:intron 45.0%
TACTGAGTGGAAGCTCTTCT+GGG + chr8_1:52675232-52675251 Msa1200260:intron 45.0%
GCTTCCATCAGTGTTTCTTC+AGG + chr8_1:52675298-52675317 Msa1200260:CDS 45.0%
TGTTGGGTTCTTGGGGAATA+TGG + chr8_1:52675423-52675442 Msa1200260:CDS 45.0%
CATTCCGCTTCCTATATCAC+TGG + chr8_1:52675462-52675481 Msa1200260:CDS 45.0%
CTTCCCAGTGATATAGGAAG+CGG - chr8_1:52675469-52675488 None:intergenic 45.0%
CACTGGGAAGTTATGCGATA+TGG + chr8_1:52675479-52675498 Msa1200260:CDS 45.0%
!! GATGAGCGTTGTCACCTTTT+CGG + chr8_1:52676009-52676028 Msa1200260:intron 45.0%
TCCCAAATCTGTAACTAGGG+GGG - chr8_1:52676551-52676570 None:intergenic 45.0%
! CTAATTTGCACTGTGGAGAG+TGG - chr8_1:52676650-52676669 None:intergenic 45.0%
TGCTTATACAAAGGGACGGA+GGG - chr8_1:52677307-52677326 None:intergenic 45.0%
TCCACCTGTTCTATTGTCAC+TGG + chr8_1:52678217-52678236 Msa1200260:intron 45.0%
AAGGGCCCTATAATTAGGGA+CGG + chr8_1:52678796-52678815 Msa1200260:intron 45.0%
CTACCTCCGTCCCTAATTAT+AGG - chr8_1:52678805-52678824 None:intergenic 45.0%
AGAGAGTGATTAAGAGGCAG+AGG + chr8_1:52679050-52679069 Msa1200260:intron 45.0%
AGAAAGGCAGTGATGGTTGA+TGG + chr8_1:52679088-52679107 Msa1200260:intron 45.0%
GAGATGCAAAAAAGGTCGAG+AGG + chr8_1:52679125-52679144 Msa1200260:intron 45.0%
GCACAGAAAACCCTAAACAC+AGG - chr8_1:52679159-52679178 None:intergenic 45.0%
! GAAACAGGTTTTGCACAAGC+CGG - chr8_1:52679192-52679211 None:intergenic 45.0%
TGCATGATCCAGATGTCAAG+AGG + chr8_1:52679307-52679326 Msa1200260:intron 45.0%
ATGATCCAGATGTCAAGAGG+AGG + chr8_1:52679310-52679329 Msa1200260:intron 45.0%
TTGCTGCAAATCAGTGGAGT+GGG - chr8_1:52679675-52679694 None:intergenic 45.0%
TACCTCAATGTCTTCGCAAC+TGG - chr8_1:52679768-52679787 None:intergenic 45.0%
GGGAGTTGAGACAATAACAG+AGG + chr8_1:52680528-52680547 Msa1200260:intron 45.0%
GAAGTTGAACCCCATTATGG+GGG + chr8_1:52680587-52680606 Msa1200260:intron 45.0%
AAGTTGAACCCCATTATGGG+GGG + chr8_1:52680588-52680607 Msa1200260:intron 45.0%
CAACCATTTGGCTGTTGACA+TGG + chr8_1:52680816-52680835 Msa1200260:intron 45.0%
TACCCATGTCAACAGCCAAA+TGG - chr8_1:52680822-52680841 None:intergenic 45.0%
GCTCGTTGTACTAATGTGCT+TGG + chr8_1:52680878-52680897 Msa1200260:intron 45.0%
ATCCAGCAGGCTATAGAAAG+TGG + chr8_1:52681007-52681026 Msa1200260:CDS 45.0%
TCCAGCAGGCTATAGAAAGT+GGG + chr8_1:52681008-52681027 Msa1200260:CDS 45.0%
CGCTCGTTCTCTGATATGTA+GGG - chr8_1:52681040-52681059 None:intergenic 45.0%
AGCCAAGATCAGCAAGAATC+TGG + chr8_1:52681091-52681110 Msa1200260:CDS 45.0%
GTCCAGATTCTTGCTGATCT+TGG - chr8_1:52681096-52681115 None:intergenic 45.0%
! ACAGCATGGTCTGAGATTTG+AGG + chr8_1:52681114-52681133 Msa1200260:CDS 45.0%
!! GGAGTAACTTTTGATGGCAC+AGG - chr8_1:52681160-52681179 None:intergenic 45.0%
! GTCGTGGATGATAGTGAAAC+TGG - chr8_1:52681181-52681200 None:intergenic 45.0%
ATAATCCCACTGACGTGATC+TGG - chr8_1:52681249-52681268 None:intergenic 45.0%
GATCATCAGGGCTTAAGCTA+AGG + chr8_1:52681281-52681300 Msa1200260:CDS 45.0%
GATGGTGTTCAGAAGAAGTG+GGG + chr8_1:52681307-52681326 Msa1200260:CDS 45.0%
GATGCTGGAGATGAATAAGC+TGG - chr8_1:52681337-52681356 None:intergenic 45.0%
GAATTTGAGGAGGATGATGC+TGG - chr8_1:52681352-52681371 None:intergenic 45.0%
TTGGGCAGTAGAATTTGAGG+AGG - chr8_1:52681362-52681381 None:intergenic 45.0%
ACTGCCCAAAATCCAGTGAA+TGG + chr8_1:52681373-52681392 Msa1200260:CDS 45.0%
TCCAGTGAATGGCATGACAA+AGG + chr8_1:52681384-52681403 Msa1200260:CDS 45.0%
ACCTTTGTCATGCCATTCAC+TGG - chr8_1:52681388-52681407 None:intergenic 45.0%
AGTGAATGGCATGACAAAGG+TGG + chr8_1:52681387-52681406 Msa1200260:CDS 45.0%
! AAGCTTGCCGCTTCATTGTT+TGG + chr8_1:52681493-52681512 Msa1200260:CDS 45.0%
AGAACCGCCAAACAATGAAG+CGG - chr8_1:52681503-52681522 None:intergenic 45.0%
!!! GCAGCACCAACATTAGCTTT+TGG - chr8_1:52681565-52681584 None:intergenic 45.0%
! ACTGCAGCTTTTGAATCCTG+AGG - chr8_1:52681595-52681614 None:intergenic 45.0%
CTCTCCTCGGATGCTTTAAT+GGG - chr8_1:52681622-52681641 None:intergenic 45.0%
! TTGTTGATTGGAGCTCTCCT+CGG - chr8_1:52681635-52681654 None:intergenic 45.0%
CCCAAGTCAAGCAAATCTTG+TGG - chr8_1:52681664-52681683 None:intergenic 45.0%
TAGTTGCATGAATGGGTCCA+CGG - chr8_1:52681716-52681735 None:intergenic 45.0%
GACCCATTCATGCAACTAGA+AGG + chr8_1:52681718-52681737 Msa1200260:CDS 45.0%
GCTACTTCTAGTGAACAGAG+TGG + chr8_1:52681829-52681848 Msa1200260:CDS 45.0%
ACTTCTAGTGAACAGAGTGG+TGG + chr8_1:52681832-52681851 Msa1200260:CDS 45.0%
CCCTTCACAGATTGTGATAC+GGG - chr8_1:52681949-52681968 None:intergenic 45.0%
CCCGTATCACAATCTGTGAA+GGG + chr8_1:52681946-52681965 Msa1200260:CDS 45.0%
TGGAGAAGGATGCAAAAGTC+AGG + chr8_1:52681989-52682008 Msa1200260:CDS 45.0%
GATGCAAAAGTCAGGCAGAT+GGG + chr8_1:52681997-52682016 Msa1200260:CDS 45.0%
AGTTGGGATTCTGTCCAGTT+GGG - chr8_1:52682029-52682048 None:intergenic 45.0%
AAGTTGGGATTCTGTCCAGT+TGG - chr8_1:52682030-52682049 None:intergenic 45.0%
GTGCAGTTTCCTGAACCAAT+TGG + chr8_1:52682129-52682148 Msa1200260:three_prime_UTR 45.0%
TGATTGCAGCCACCAAGAAT+TGG + chr8_1:52682202-52682221 Msa1200260:three_prime_UTR 45.0%
GATTGCAGCCACCAAGAATT+GGG + chr8_1:52682203-52682222 Msa1200260:three_prime_UTR 45.0%
TGGAATCACCCAATTCTTGG+TGG - chr8_1:52682214-52682233 None:intergenic 45.0%
TTCCTCGTTGCATTGTATCC+AGG + chr8_1:52682299-52682318 Msa1200260:three_prime_UTR 45.0%
AACCTGGATACAATGCAACG+AGG - chr8_1:52682304-52682323 None:intergenic 45.0%
TAACAGTACCCTTCCTTCAG+AGG - chr8_1:52682341-52682360 None:intergenic 45.0%
!! AGGAAGGGTACTGTTATGCA+TGG + chr8_1:52682345-52682364 Msa1200260:three_prime_UTR 45.0%
CTTGATACTGCGGTCATAGT+CGG + chr8_1:52682500-52682519 Msa1200260:three_prime_UTR 45.0%
TAAACAATCCCCAGAACACC+AGG - chr8_1:52682646-52682665 None:intergenic 45.0%
!! AAAAGATATAAAATAAATAA+GGG - chr8_1:52678639-52678658 None:intergenic 5.0%
!! AAAAAGATATAAAATAAATA+AGG - chr8_1:52678640-52678659 None:intergenic 5.0%
GTAAACGACGTCGTGTACGA+CGG - chr8_1:52670742-52670761 None:intergenic 50.0%
!! GTTACGGTGGTGGATCTGAT+CGG - chr8_1:52670842-52670861 None:intergenic 50.0%
! TGCTCCATTGGTTGTTACGG+AGG - chr8_1:52670895-52670914 None:intergenic 50.0%
! GATTCGGTCTTCTTCGGCTT+TGG - chr8_1:52671019-52671038 None:intergenic 50.0%
! GTTCGGAGATTCGGCGTTTT+AGG - chr8_1:52671062-52671081 None:intergenic 50.0%
CAGAGTAACGGCGAGATAAC+CGG - chr8_1:52671220-52671239 None:intergenic 50.0%
TGAGATCGTGATCGTCGTTG+AGG - chr8_1:52671245-52671264 None:intergenic 50.0%
ACAACTAACGGCAAAACGGC+AGG - chr8_1:52671375-52671394 None:intergenic 50.0%
!! GTCGTCGGTTTCACATCTTG+TGG + chr8_1:52671473-52671492 Msa1200260:CDS 50.0%
AGAGTAGCACCCATAACACC+AGG - chr8_1:52671531-52671550 None:intergenic 50.0%
CGATGATCCGAGTCCGTATA+AGG + chr8_1:52671575-52671594 Msa1200260:CDS 50.0%
ATCACCTGAACGAAAGGAGC+CGG - chr8_1:52671681-52671700 None:intergenic 50.0%
CGAGCACAAAACATGCCGAT+TGG - chr8_1:52672057-52672076 None:intergenic 50.0%
! GATGAGTTGGATGGCAACCA+TGG + chr8_1:52672253-52672272 Msa1200260:intron 50.0%
CGCAGCAGCTTCTAACAACT+TGG - chr8_1:52673060-52673079 None:intergenic 50.0%
! TGCCGTCATTGACTGCTTAG+AGG + chr8_1:52673310-52673329 Msa1200260:CDS 50.0%
AATGTGGAAGGAAGCCTAGC+AGG - chr8_1:52673986-52674005 None:intergenic 50.0%
! TAACTAGTAATGGAGGCCGG+TGG + chr8_1:52674311-52674330 Msa1200260:intron 50.0%
! GAAGCTCTTCTGGGAGATGT+AGG + chr8_1:52675241-52675260 Msa1200260:intron 50.0%
GAAGTTATGCGATATGGCCG+AGG + chr8_1:52675485-52675504 Msa1200260:CDS 50.0%
GGAAGTAGGACCAGGAAGAA+AGG - chr8_1:52675809-52675828 None:intergenic 50.0%
AATGGATCCAGCACGGAAGT+AGG - chr8_1:52675823-52675842 None:intergenic 50.0%
! TGTAACTAGGGGGGCGTATA+GGG - chr8_1:52676542-52676561 None:intergenic 50.0%
GCCCCCCTAGTTACAGATTT+GGG + chr8_1:52676547-52676566 Msa1200260:intron 50.0%
GTGCTTATACAAAGGGACGG+AGG - chr8_1:52677308-52677327 None:intergenic 50.0%
! TACGCGGATTGTGGATGTGT+TGG + chr8_1:52677694-52677713 Msa1200260:intron 50.0%
! ACGCGGATTGTGGATGTGTT+GGG + chr8_1:52677695-52677714 Msa1200260:intron 50.0%
! CGTTTGAAATAGCAGCTGGG+AGG + chr8_1:52678142-52678161 Msa1200260:CDS 50.0%
AATAGCAGCTGGGAGGAAAG+TGG + chr8_1:52678149-52678168 Msa1200260:CDS 50.0%
GCCAGTGACAATAGAACAGG+TGG - chr8_1:52678221-52678240 None:intergenic 50.0%
! TTGTGAAACCATGGCTGGTC+TGG + chr8_1:52678373-52678392 Msa1200260:intron 50.0%
TGGTAGTAATGGTTACGGGC+TGG - chr8_1:52678946-52678965 None:intergenic 50.0%
GTTGTGTGCGACTGAGAGAA+AGG + chr8_1:52679072-52679091 Msa1200260:intron 50.0%
GACTGAGAGAAAGGCAGTGA+TGG + chr8_1:52679081-52679100 Msa1200260:intron 50.0%
TCTGCGATCTTGCTCGTTTC+TGG - chr8_1:52679224-52679243 None:intergenic 50.0%
GTACTCCTCCTCTTGACATC+TGG - chr8_1:52679318-52679337 None:intergenic 50.0%
! CAAGAGGAGGAGTACGATCA+TGG + chr8_1:52679323-52679342 Msa1200260:intron 50.0%
GTTGCTGCAAATCAGTGGAG+TGG - chr8_1:52679676-52679695 None:intergenic 50.0%
TCTTCGCAACTGGCATCATG+TGG - chr8_1:52679758-52679777 None:intergenic 50.0%
TGCCAGTTGCGAAGACATTG+AGG + chr8_1:52679763-52679782 Msa1200260:CDS 50.0%
TTCGGTCGGTGTATCTGTCT+TGG + chr8_1:52680705-52680724 Msa1200260:intron 50.0%
TCGGTCGGTGTATCTGTCTT+GGG + chr8_1:52680706-52680725 Msa1200260:intron 50.0%
CCAGCAGGCTATAGAAAGTG+GGG + chr8_1:52681009-52681028 Msa1200260:CDS 50.0%
GCGCTCGTTCTCTGATATGT+AGG - chr8_1:52681041-52681060 None:intergenic 50.0%
ATATCAGAGAACGAGCGCTC+TGG + chr8_1:52681043-52681062 Msa1200260:CDS 50.0%
CAGCAAGAATCTGGACAGCA+TGG + chr8_1:52681100-52681119 Msa1200260:CDS 50.0%
! TTTGATGGCACAGGAGCCTT+TGG - chr8_1:52681151-52681170 None:intergenic 50.0%
GACTGACCTTGTTCCAGTGT+CGG + chr8_1:52681198-52681217 Msa1200260:CDS 50.0%
ATGAGTCCGACACTGGAACA+AGG - chr8_1:52681207-52681226 None:intergenic 50.0%
GCATACAATGAGTCCGACAC+TGG - chr8_1:52681214-52681233 None:intergenic 50.0%
TGTCGGACTCATTGTATGCG+AGG + chr8_1:52681215-52681234 Msa1200260:CDS 50.0%
GTCGGACTCATTGTATGCGA+GGG + chr8_1:52681216-52681235 Msa1200260:CDS 50.0%
ACTCACCAGATCACGTCAGT+GGG + chr8_1:52681241-52681260 Msa1200260:CDS 50.0%
GGGCTTAAGCTAAGGCTTGA+TGG + chr8_1:52681289-52681308 Msa1200260:CDS 50.0%
! CTTGCCGCTTCATTGTTTGG+CGG + chr8_1:52681496-52681515 Msa1200260:CDS 50.0%
! TGTGCCCATTAAAGCATCCG+AGG + chr8_1:52681615-52681634 Msa1200260:CDS 50.0%
GCTCTCCTCGGATGCTTTAA+TGG - chr8_1:52681623-52681642 None:intergenic 50.0%
TCTAGTGAACAGAGTGGTGG+CGG + chr8_1:52681835-52681854 Msa1200260:CDS 50.0%
AGCTGCTGCATTTGACAACC+CGG - chr8_1:52681893-52681912 None:intergenic 50.0%
TCAAATGCAGCAGCTGTCAG+AGG + chr8_1:52681898-52681917 Msa1200260:CDS 50.0%
ACAGATTGTGATACGGGCGA+CGG - chr8_1:52681943-52681962 None:intergenic 50.0%
GCCCGTATCACAATCTGTGA+AGG + chr8_1:52681945-52681964 Msa1200260:CDS 50.0%
GGATGCAAAAGTCAGGCAGA+TGG + chr8_1:52681996-52682015 Msa1200260:CDS 50.0%
GTTGGGATTCTGTCCAGTTG+GGG - chr8_1:52682028-52682047 None:intergenic 50.0%
TGCTTGGCTAATCCGATGAG+AGG + chr8_1:52682061-52682080 Msa1200260:exon 50.0%
ATTCTTCGGTCACTTCTGCC+TGG + chr8_1:52682625-52682644 Msa1200260:three_prime_UTR 50.0%
TCACTTCTGCCTGGTGTTCT+GGG + chr8_1:52682634-52682653 Msa1200260:three_prime_UTR 50.0%
! GGGTTTGGAGAGTGTGAAGG+TGG - chr8_1:52670779-52670798 None:intergenic 55.0%
GATCGGAGGGGTTGTGGTTA+TGG - chr8_1:52670825-52670844 None:intergenic 55.0%
ATGGTTCCCGGAGGTGGTTA+CGG - chr8_1:52670858-52670877 None:intergenic 55.0%
! TTGGATCCGGTGATGGTTCC+CGG - chr8_1:52670870-52670889 None:intergenic 55.0%
!!! GGAGGTTTTGGATCCGGTGA+TGG - chr8_1:52670877-52670896 None:intergenic 55.0%
GAACTCGCCATGGGATCACA+AGG + chr8_1:52670934-52670953 Msa1200260:CDS 55.0%
ATGGGATCACAAGGCGCGTT+CGG + chr8_1:52670943-52670962 Msa1200260:CDS 55.0%
AGGCGCGTTCGGTCAATCAA+AGG + chr8_1:52670954-52670973 Msa1200260:CDS 55.0%
CTCGGTCACGACGCTTCTTT+CGG + chr8_1:52671141-52671160 Msa1200260:CDS 55.0%
CGCATGGGAAAGAAGCGGTT+AGG + chr8_1:52671406-52671425 Msa1200260:CDS 55.0%
TCATCGGAAATCGGCGTCGT+CGG + chr8_1:52671458-52671477 Msa1200260:CDS 55.0%
GGCGTGAAGATAACAGCCAC+CGG - chr8_1:52674330-52674349 None:intergenic 55.0%
GGGGAATATGGCACAGCTGA+TGG + chr8_1:52675435-52675454 Msa1200260:CDS 55.0%
! GTAACTAGGGGGGCGTATAG+GGG - chr8_1:52676541-52676560 None:intergenic 55.0%
! CTGTAACTAGGGGGGCGTAT+AGG - chr8_1:52676543-52676562 None:intergenic 55.0%
CGCCCCCCTAGTTACAGATT+TGG + chr8_1:52676546-52676565 Msa1200260:intron 55.0%
TGCACTGTGGAGAGTGGTCT+CGG - chr8_1:52676644-52676663 None:intergenic 55.0%
GTGTAGAACCAGACCAGCCA+TGG - chr8_1:52678384-52678403 None:intergenic 55.0%
GGCCCTATAATTAGGGACGG+AGG + chr8_1:52678799-52678818 Msa1200260:intron 55.0%
!! ACGGGCTGGTACTAGCAGTA+AGG - chr8_1:52678932-52678951 None:intergenic 55.0%
TCTCTCTCAGTCACGCGCAA+CGG - chr8_1:52679035-52679054 None:intergenic 55.0%
AGCGCGTTGCTGCAAATCAG+TGG - chr8_1:52679681-52679700 None:intergenic 55.0%
GAACCCCATTATGGGGGGTT+TGG + chr8_1:52680593-52680612 Msa1200260:intron 55.0%
CAGCCAAACCCCCCATAATG+GGG - chr8_1:52680599-52680618 None:intergenic 55.0%
CCAGCCAAACCCCCCATAAT+GGG - chr8_1:52680600-52680619 None:intergenic 55.0%
ACCAGCCAAACCCCCCATAA+TGG - chr8_1:52680601-52680620 None:intergenic 55.0%
CCCCACTTTCTATAGCCTGC+TGG - chr8_1:52681012-52681031 None:intergenic 55.0%
CACTGGAACAAGGTCAGTCG+TGG - chr8_1:52681197-52681216 None:intergenic 55.0%
GACTCACCAGATCACGTCAG+TGG + chr8_1:52681240-52681259 Msa1200260:CDS 55.0%
!! GCGGCAAGCTTCTGCTTTTC+TGG - chr8_1:52681484-52681503 None:intergenic 55.0%
! GGGGGTGCAACAGTGACATT+TGG - chr8_1:52681691-52681710 None:intergenic 55.0%
TGCATGAATGGGTCCACGGT+GGG - chr8_1:52681712-52681731 None:intergenic 55.0%
TTGCATGAATGGGTCCACGG+TGG - chr8_1:52681713-52681732 None:intergenic 55.0%
GGCGGCTATAACTCTGCAAG+TGG + chr8_1:52681856-52681875 Msa1200260:CDS 55.0%
! AGCAGCTGTCAGAGGCACAA+CGG + chr8_1:52681906-52681925 Msa1200260:CDS 55.0%
GGTTCAGGAAACTGCACGTG+CGG - chr8_1:52682126-52682145 None:intergenic 55.0%
! AGGCCTAGCCTCTGAAGGAA+GGG + chr8_1:52682330-52682349 Msa1200260:three_prime_UTR 55.0%
GTACCCTTCCTTCAGAGGCT+AGG - chr8_1:52682336-52682355 None:intergenic 55.0%
GTCACTTCTGCCTGGTGTTC+TGG + chr8_1:52682633-52682652 Msa1200260:three_prime_UTR 55.0%
CACTTCTGCCTGGTGTTCTG+GGG + chr8_1:52682635-52682654 Msa1200260:three_prime_UTR 55.0%
GGATCTGATCGGAGGGGTTG+TGG - chr8_1:52670831-52670850 None:intergenic 60.0%
!! GGTGGTGGATCTGATCGGAG+GGG - chr8_1:52670837-52670856 None:intergenic 60.0%
!! CGGTGGTGGATCTGATCGGA+GGG - chr8_1:52670838-52670857 None:intergenic 60.0%
!! ACGGTGGTGGATCTGATCGG+AGG - chr8_1:52670839-52670858 None:intergenic 60.0%
TCCACCACCGTAACCACCTC+CGG + chr8_1:52670848-52670867 Msa1200260:five_prime_UTR 60.0%
GTGATCCCATGGCGAGTTCG+CGG - chr8_1:52670933-52670952 None:intergenic 60.0%
GAACGCGCCTTGTGATCCCA+TGG - chr8_1:52670944-52670963 None:intergenic 60.0%
GAACGAAAGGAGCCGGCATC+TGG - chr8_1:52671674-52671693 None:intergenic 60.0%
!! GATGCCGGCTCCTTTCGTTC+AGG + chr8_1:52671674-52671693 Msa1200260:CDS 60.0%
TCCTGGTCCTACTTCCGTGC+TGG + chr8_1:52675813-52675832 Msa1200260:intron 60.0%
TCCAGCACGGAAGTAGGACC+AGG - chr8_1:52675817-52675836 None:intergenic 60.0%
!! AAAGGGACGGAGGGAGTGCT+GGG - chr8_1:52677298-52677317 None:intergenic 60.0%
CCCATTATGGGGGGTTTGGC+TGG + chr8_1:52680597-52680616 Msa1200260:intron 60.0%
!! AGAGAACGAGCGCTCTGGAG+CGG + chr8_1:52681048-52681067 Msa1200260:CDS 60.0%
!! TGGTGCTGCAGACAGACCTC+AGG + chr8_1:52681576-52681595 Msa1200260:CDS 60.0%
ATGAATGGGTCCACGGTGGG+GGG - chr8_1:52681709-52681728 None:intergenic 60.0%
CATGAATGGGTCCACGGTGG+GGG - chr8_1:52681710-52681729 None:intergenic 60.0%
GCATGAATGGGTCCACGGTG+GGG - chr8_1:52681711-52681730 None:intergenic 60.0%
!! AGTGAACAGAGTGGTGGCGG+CGG + chr8_1:52681838-52681857 Msa1200260:CDS 60.0%
! GCAGCTGTCAGAGGCACAAC+GGG + chr8_1:52681907-52681926 Msa1200260:CDS 60.0%
CAGATGGGTGTGACCCCAAC+TGG + chr8_1:52682012-52682031 Msa1200260:CDS 60.0%
GGCTAGGCCTGACCAAAACC+TGG - chr8_1:52682320-52682339 None:intergenic 60.0%
TGGTCAGGCCTAGCCTCTGA+AGG + chr8_1:52682325-52682344 Msa1200260:three_prime_UTR 60.0%
! CAGGCCTAGCCTCTGAAGGA+AGG + chr8_1:52682329-52682348 Msa1200260:three_prime_UTR 60.0%
CCACCACCGTAACCACCTCC+GGG + chr8_1:52670849-52670868 Msa1200260:five_prime_UTR 65.0%
GTTCCCGGAGGTGGTTACGG+TGG - chr8_1:52670855-52670874 None:intergenic 65.0%
CCACCTCCGGGAACCATCAC+CGG + chr8_1:52670861-52670880 Msa1200260:five_prime_UTR 65.0%
! GATCCGGTGATGGTTCCCGG+AGG - chr8_1:52670867-52670886 None:intergenic 65.0%
AATCGGCCGCGAACTCGCCA+TGG + chr8_1:52670924-52670943 Msa1200260:CDS 65.0%
ATCGGCCGCGAACTCGCCAT+GGG + chr8_1:52670925-52670944 Msa1200260:CDS 65.0%
! CAAAGGGACGGAGGGAGTGC+TGG - chr8_1:52677299-52677318 None:intergenic 65.0%
TCACGCGCAACGGTGCAGGA+AGG - chr8_1:52679025-52679044 None:intergenic 65.0%
TCAGTCACGCGCAACGGTGC+AGG - chr8_1:52679029-52679048 None:intergenic 65.0%
CCCGGAGGTGGTTACGGTGG+TGG - chr8_1:52670852-52670871 None:intergenic 70.0%
! CCGGTGATGGTTCCCGGAGG+TGG - chr8_1:52670864-52670883 None:intergenic 70.0%
CGCGCAACGGTGCAGGAAGG+CGG - chr8_1:52679022-52679041 None:intergenic 70.0%
CACTGTTGCACCCCCCACCG+TGG + chr8_1:52681696-52681715 Msa1200260:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 52670651 52682682 52670651 ID=Msa1200260;Name=Msa1200260
chr8_1 mRNA 52670651 52682682 52670651 ID=Msa1200260-mRNA-1;Parent=Msa1200260;Name=Msa1200260-mRNA-1;_AED=0.04;_eAED=0.04;_QI=256|1|1|1|1|1|10|611|979
chr8_1 exon 52670651 52671695 52670651 ID=Msa1200260-mRNA-1:exon:16832;Parent=Msa1200260-mRNA-1
chr8_1 exon 52672888 52673103 52672888 ID=Msa1200260-mRNA-1:exon:16833;Parent=Msa1200260-mRNA-1
chr8_1 exon 52673221 52673331 52673221 ID=Msa1200260-mRNA-1:exon:16834;Parent=Msa1200260-mRNA-1
chr8_1 exon 52674742 52674939 52674742 ID=Msa1200260-mRNA-1:exon:16835;Parent=Msa1200260-mRNA-1
chr8_1 exon 52675034 52675165 52675034 ID=Msa1200260-mRNA-1:exon:16836;Parent=Msa1200260-mRNA-1
chr8_1 exon 52675263 52675319 52675263 ID=Msa1200260-mRNA-1:exon:16837;Parent=Msa1200260-mRNA-1
chr8_1 exon 52675417 52675533 52675417 ID=Msa1200260-mRNA-1:exon:16838;Parent=Msa1200260-mRNA-1
chr8_1 exon 52678108 52678185 52678108 ID=Msa1200260-mRNA-1:exon:16839;Parent=Msa1200260-mRNA-1
chr8_1 exon 52679641 52679784 52679641 ID=Msa1200260-mRNA-1:exon:16840;Parent=Msa1200260-mRNA-1
chr8_1 exon 52680974 52682682 52680974 ID=Msa1200260-mRNA-1:exon:16841;Parent=Msa1200260-mRNA-1
chr8_1 five_prime_UTR 52670651 52670906 52670651 ID=Msa1200260-mRNA-1:five_prime_utr;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52670907 52671695 52670907 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52672888 52673103 52672888 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52673221 52673331 52673221 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52674742 52674939 52674742 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52675034 52675165 52675034 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52675263 52675319 52675263 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52675417 52675533 52675417 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52678108 52678185 52678108 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52679641 52679784 52679641 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 CDS 52680974 52682071 52680974 ID=Msa1200260-mRNA-1:cds;Parent=Msa1200260-mRNA-1
chr8_1 three_prime_UTR 52682072 52682682 52682072 ID=Msa1200260-mRNA-1:three_prime_utr;Parent=Msa1200260-mRNA-1
Gene Sequence

>Msa1200260

ATGGAGCAACTGAAAACAATCGGCCGCGAACTCGCCATGGGATCACAAGGCGCGTTCGGTCAATCAAAGGAGTTTCTCGACCTAATCAAATCAATCGGTGAATCTCGATCCAAAGCCGAAGAAGACCGAATCGTAATCCGTGAAATCGAAACCCTAAAACGCCGAATCTCCGAACCAGATATCCCTAAACGGAAGATGAAAGAGTACATAATTCGTCTTCTCTACGTTGAAATGCTCGGTCACGACGCTTCTTTCGGTTACATTCACGCCGTTAAAATGACTCACGATGATAATCTTCTCTCAAAACGCACCGGTTATCTCGCCGTTACTCTGTTCCTCAACGACGATCACGATCTCATTATCTTAATCGTTAATACGATTCAAAAGGATCTTAAATCTGATAATTACCTTGTCGTTTGTGCTGCACTTAATGCCGTTTGTAGATTAATCAACGAAGAAACTATACCTGCCGTTTTGCCGTTAGTTGTTGAGCTTCTTTCGCATGGGAAAGAAGCGGTTAGGAAGAAAGCGGTTATGGCGCTTCATAGCTTTCATCGGAAATCGGCGTCGTCGGTTTCACATCTTGTGGCGAATTTTAGGAAGAGATTGTGTGATAATGATCCTGGTGTTATGGGTGCTACTCTTTGTCCTTTGTTTGATCTTATAAGCGATGATCCGAGTCCGTATAAGGATCTTGTTGTTAGTTTTGTTAGTATTCTTAAACAGGTAGCTGAACATAGGTTGCCTAAGAGCTATGATTATCACCAGATGCCGGCTCCTTTCGTTCAGATTAAGTTGCTGAAAATTCTTGCATTGTTGGGAAGTGGCGACAAGAGTTCTAGCGAACACATGTACACCGTTATTGGCGATATAATTAGGAAGGGTGATTCATCAAGTAACATAGGGAATGCTATTCTTTATGAGTCCATTCGCTGTGTCTCTTCCATATATCCCAATCCCAAGTTGTTAGAAGCTGCTGCGGATGTGATTGCCAAGTTTTTGAAGAGTGATAGTCATAATCTGAAATACATGGGTATTGATGCTCTCGGTCGATTGATCAAGTTAAGTCCGCTTATTGCAGAACAACATCAACTTGCCGTCATTGACTGCTTAGAGGATCCTGACGATACTTTGAAGCGAAAAACTTTTGAACTGCTATACAAAATGACCAAGTCTTCCAATGTGGAAGTGATCGTTGACCGTATGATTGAGTACATGATCAGCATTAGTGACGATCATTATAAAACCTATATAGCTTCTCGATGTGTGGAACTTGCTGAACAATTTGCACCGAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATATTAAGGTTGCACATAATTTAATGCGGTTGATTGCAGAAGGATTTGGAGAGGACGATGATGCCGCATATAGTCAGCTGAGATCGTCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCAGTGTTTCTTCAGGTTATTTGTTGGGTTCTTGGGGAATATGGCACAGCTGATGGAAAGCATTCCGCTTCCTATATCACTGGGAAGTTATGCGATATGGCCGAGGCATATTCTAATGATGAAATTGTTAAGGCATATGCAATAACAGCGCTGACAAAAATTTATGCGTTTGAAATAGCAGCTGGGAGGAAAGTGGATATGCTATCTGAGTGTCAATCTTTGGTTGAAGAATTATTAGCTTCCCACTCCACTGATTTGCAGCAACGCGCTTATGAATTACAAGCTGTTATTGGTTTGGATGCACGGGCTGTTGAAGCAATATTGCCACATGATGCCAGTTGCGAAGACATTGAGGTGGATAAGAATCTGTCTTTCCTCAATGATTATATCCAGCAGGCTATAGAAAGTGGGGCTATGCCCTACATATCAGAGAACGAGCGCTCTGGAGCGGTGAGTGTGAGCAACTTCAGAAGCCAAGATCAGCAAGAATCTGGACAGCATGGTCTGAGATTTGAGGCTTATGAAGTTCCAAAGGCTCCTGTGCCATCAAAAGTTACTCCAGTTTCACTATCATCCACGACTGACCTTGTTCCAGTGTCGGACTCATTGTATGCGAGGGAGACTCACCAGATCACGTCAGTGGGATTATCATCAGATACAGGATCATCAGGGCTTAAGCTAAGGCTTGATGGTGTTCAGAAGAAGTGGGGTAAGCCAGCTTATTCATCTCCAGCATCATCCTCCTCAAATTCTACTGCCCAAAATCCAGTGAATGGCATGACAAAGGTGGATGTTGCAACTAGTGTAAATTCAAAAGTACGTGATAGCTACGATTCAAGAAAGCAACGGAATGAAATTGATCCAGAAAAGCAGAAGCTTGCCGCTTCATTGTTTGGCGGTTCTACTAAACCTGAGAGAAGAACATCAACTAGCAGCAAGGTTCCAAAAGCTAATGTTGGTGCTGCAGACAGACCTCAGGATTCAAAAGCTGCAGTTGTGCCCATTAAAGCATCCGAGGAGAGCTCCAATCAACAATCTCCTCCACAAGATTTGCTTGACTTGGGTGAACCAAATGTCACTGTTGCACCCCCCACCGTGGACCCATTCATGCAACTAGAAGGACTTCTTGACCCAAGCATTAGTTCTACAGTAAGTCATAGTGATAGTGCTGTTACAAATGCACCTGATATTATGGGACTCTATAGTGGGGCTACTTCTAGTGAACAGAGTGGTGGCGGCGGCTATAACTCTGCAAGTGGAGATCTTTTATCCGGGTTGTCAAATGCAGCAGCTGTCAGAGGCACAACGGGAGAAACAATTCCGTCGCCCGTATCACAATCTGTGAAGGGTGCTAATGCTAAAGATTCTTTGGAGAAGGATGCAAAAGTCAGGCAGATGGGTGTGACCCCAACTGGACAGAATCCCAACTTGTTCAGAGACTTGCTTGGCTAA
Protein sequence

>Msa1200260

MEQLKTIGRELAMGSQGAFGQSKEFLDLIKSIGESRSKAEEDRIVIREIETLKRRISEPDIPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDNLLSKRTGYLAVTLFLNDDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPLVVELLSHGKEAVRKKAVMALHSFHRKSASSVSHLVANFRKRLCDNDPGVMGATLCPLFDLISDDPSPYKDLVVSFVSILKQVAEHRLPKSYDYHQMPAPFVQIKLLKILALLGSGDKSSSEHMYTVIGDIIRKGDSSSNIGNAILYESIRCVSSIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPLIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAAYSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKHSASYITGKLCDMAEAYSNDEIVKAYAITALTKIYAFEIAAGRKVDMLSECQSLVEELLASHSTDLQQRAYELQAVIGLDARAVEAILPHDASCEDIEVDKNLSFLNDYIQQAIESGAMPYISENERSGAVSVSNFRSQDQQESGQHGLRFEAYEVPKAPVPSKVTPVSLSSTTDLVPVSDSLYARETHQITSVGLSSDTGSSGLKLRLDGVQKKWGKPAYSSPASSSSNSTAQNPVNGMTKVDVATSVNSKVRDSYDSRKQRNEIDPEKQKLAASLFGGSTKPERRTSTSSKVPKANVGAADRPQDSKAAVVPIKASEESSNQQSPPQDLLDLGEPNVTVAPPTVDPFMQLEGLLDPSISSTVSHSDSAVTNAPDIMGLYSGATSSEQSGGGGYNSASGDLLSGLSNAAAVRGTTGETIPSPVSQSVKGANAKDSLEKDAKVRQMGVTPTGQNPNLFRDLLG*