AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0035320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035320 MtrunA17_Chr1g0197551 100.000 234 0 0 1 234 1 234 3.15e-169 498
Msa0035320 MtrunA17_Chr1g0197551 28.177 181 101 3 12 163 96 276 3.22e-18 83.6
Msa0035320 MtrunA17_Chr4g0035611 93.590 234 15 0 1 234 1 234 1.85e-160 475
Msa0035320 MtrunA17_Chr4g0035611 27.072 181 103 3 12 163 96 276 8.16e-18 82.4
Msa0035320 MtrunA17_Chr4g0035611 26.627 169 91 3 16 153 142 308 5.70e-12 65.1
Msa0035320 MtrunA17_Chr2g0331981 34.800 250 138 4 4 231 10 256 4.50e-45 160
Msa0035320 MtrunA17_Chr4g0004241 34.818 247 142 4 4 231 10 256 4.97e-45 160
Msa0035320 MtrunA17_Chr2g0331961 34.000 250 140 5 4 231 12 258 4.49e-43 147
Msa0035320 MtrunA17_Chr2g0331961 28.916 166 114 3 2 163 94 259 7.09e-23 94.7
Msa0035320 MtrunA17_Chr2g0281451 27.841 176 121 1 2 171 51 226 1.70e-22 95.9
Msa0035320 MtrunA17_Chr2g0281451 25.373 201 123 2 33 233 40 213 2.48e-18 83.6
Msa0035320 MtrunA17_Chr4g0067151 27.559 254 157 5 2 231 71 321 1.85e-22 93.6
Msa0035320 MtrunA17_Chr4g0067151 26.872 227 140 6 37 237 13 239 1.10e-19 86.3
Msa0035320 MtrunA17_Chr6g0448921 26.250 160 118 0 9 168 59 218 1.53e-21 92.8
Msa0035320 MtrunA17_Chr6g0448921 26.437 174 101 2 62 235 28 174 7.74e-17 79.3
Msa0035320 MtrunA17_Chr6g0448921 25.871 201 122 2 33 233 41 214 1.02e-16 79.0
Msa0035320 MtrunA17_Chr1g0185501 30.270 185 102 1 50 234 26 183 2.21e-21 90.5
Msa0035320 MtrunA17_Chr1g0185501 31.250 160 98 6 12 162 156 312 1.78e-14 71.2
Msa0035320 MtrunA17_Chr1g0185501 23.016 252 173 5 1 231 61 312 8.46e-12 63.5
Msa0035320 MtrunA17_Chr3g0136971 26.609 233 142 3 3 234 413 617 1.66e-19 87.0
Msa0035320 MtrunA17_Chr3g0099061 32.558 172 106 3 4 166 210 380 9.25e-18 81.6
Msa0035320 MtrunA17_Chr5g0405851 26.380 163 119 1 1 162 245 407 2.68e-17 80.5
Msa0035320 MtrunA17_Chr5g0405851 25.309 162 120 1 6 166 292 453 1.14e-15 75.5
Msa0035320 MtrunA17_Chr2g0295791 23.451 226 146 2 12 237 173 371 3.33e-17 80.1
Msa0035320 MtrunA17_Chr2g0295791 26.630 184 108 1 50 233 169 325 5.17e-17 79.7
Msa0035320 MtrunA17_Chr2g0295791 25.850 147 109 0 10 156 213 359 2.60e-13 68.6
Msa0035320 MtrunA17_Chr7g0253861 24.537 216 125 5 22 228 154 340 6.44e-17 78.6
Msa0035320 MtrunA17_Chr8g0352821 24.454 229 156 3 23 234 239 467 1.84e-16 78.2
Msa0035320 MtrunA17_Chr8g0352821 26.174 149 110 0 24 172 198 346 7.99e-11 61.6
Msa0035320 MtrunA17_Chr8g0392701 32.468 154 98 3 31 179 85 237 3.86e-16 76.3
Msa0035320 MtrunA17_Chr3g0138311 28.351 194 124 5 57 236 627 819 1.39e-15 75.5
Msa0035320 MtrunA17_Chr3g0093681 25.153 163 121 1 1 162 348 510 1.81e-15 75.1
Msa0035320 MtrunA17_Chr3g0093681 25.157 159 118 1 9 166 398 556 8.48e-14 70.1
Msa0035320 MtrunA17_Chr1g0172501 25.153 163 121 1 1 162 348 510 2.11e-15 75.1
Msa0035320 MtrunA17_Chr1g0172501 25.157 159 118 1 9 166 398 556 4.07e-14 71.2
Msa0035320 MtrunA17_Chr1g0148791 28.421 190 121 5 58 233 629 817 3.84e-15 74.3
Msa0035320 MtrunA17_Chr4g0069701 28.358 134 96 0 31 164 86 219 2.30e-14 72.0
Msa0035320 MtrunA17_Chr2g0285951 27.826 115 83 0 50 164 29 143 3.88e-14 70.1
Msa0035320 MtrunA17_Chr8g0390861 24.286 140 104 1 24 163 967 1104 7.35e-14 70.5
Msa0035320 MtrunA17_Chr4g0059031 26.901 171 116 3 3 164 54 224 8.84e-14 70.5
Msa0035320 MtrunA17_Chr4g0059031 27.895 190 108 5 74 234 383 572 1.32e-12 67.0
Msa0035320 MtrunA17_Chr4g0059031 27.083 192 128 4 12 196 464 650 3.54e-11 62.8
Msa0035320 MtrunA17_Chr7g0266251 23.600 250 150 8 2 232 9 236 9.85e-14 69.3
Msa0035320 MtrunA17_Chr7g0266251 21.071 280 166 8 6 233 66 342 2.70e-12 65.5
Msa0035320 MtrunA17_Chr1g0194721 29.240 171 109 2 8 166 190 360 3.82e-13 68.6
Msa0035320 MtrunA17_Chr8g0383711 26.344 186 130 3 17 197 26 209 1.77e-12 65.5
Msa0035320 MtrunA17_Chr8g0383711 25.571 219 140 7 33 232 84 298 3.85e-11 61.6
Msa0035320 MtrunA17_Chr5g0396821 25.243 206 147 7 21 222 783 985 9.20e-12 64.3
Msa0035320 MtrunA17_Chr4g0062881 21.834 229 143 5 7 232 262 457 1.31e-11 63.5
Msa0035320 MtrunA17_Chr7g0237271 27.919 197 121 7 54 233 510 702 1.98e-11 63.2
Msa0035320 MtrunA17_Chr7g0237241 27.919 197 121 7 54 233 501 693 3.20e-11 62.8
Msa0035320 MtrunA17_Chr1g0158791 30.719 153 92 6 20 164 59 205 3.27e-11 62.4
Msa0035320 MtrunA17_Chr2g0317491 26.733 202 139 8 21 218 627 823 3.55e-11 62.8
Msa0035320 MtrunA17_Chr2g0294611 27.811 169 110 2 7 163 191 359 3.67e-11 62.8
Msa0035320 MtrunA17_Chr5g0401661 24.017 229 137 4 15 234 443 643 4.10e-11 62.4
Msa0035320 MtrunA17_Chr1g0176241 25.506 247 161 8 10 237 162 404 4.70e-11 62.0
Msa0035320 MtrunA17_Chr4g0057141 24.757 206 120 7 59 237 363 560 6.25e-11 61.6
Msa0035320 MtrunA17_Chr1g0200901 21.138 246 174 6 3 231 117 359 6.58e-11 61.6
Msa0035320 MtrunA17_Chr2g0321211 24.500 200 90 4 66 234 28 197 6.60e-11 62.0
Msa0035320 MtrunA17_Chr1g0185891 24.757 206 120 7 59 237 302 499 7.78e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035320 AT2G21390.1 93.162 234 16 0 1 234 1 234 4.15e-161 477
Msa0035320 AT2G21390.1 27.072 181 103 3 12 163 96 276 8.53e-17 79.7
Msa0035320 AT2G21390.1 27.647 170 88 5 16 153 142 308 8.88e-13 67.8
Msa0035320 AT1G62020.1 91.880 234 19 0 1 234 1 234 4.88e-159 472
Msa0035320 AT1G62020.1 25.967 181 105 2 12 163 96 276 2.22e-16 78.6
Msa0035320 AT1G62020.1 26.036 169 92 3 16 153 142 308 2.54e-12 66.6
Msa0035320 AT1G79990.2 36.842 247 137 4 4 231 10 256 7.54e-48 169
Msa0035320 AT1G79990.1 36.842 247 137 4 4 231 10 256 9.68e-48 169
Msa0035320 AT3G15980.1 35.200 250 137 4 4 231 10 256 1.68e-46 165
Msa0035320 AT3G15980.5 35.200 250 137 4 4 231 10 256 2.06e-46 165
Msa0035320 AT3G15980.3 35.200 250 137 4 4 231 10 256 2.11e-46 165
Msa0035320 AT3G15980.6 35.200 250 137 4 4 231 10 256 2.11e-46 165
Msa0035320 AT3G15980.2 35.200 250 137 4 4 231 10 256 2.11e-46 165
Msa0035320 AT3G15980.4 35.200 250 137 4 4 231 10 256 2.11e-46 165
Msa0035320 AT3G15980.7 35.200 250 137 4 4 231 10 256 2.14e-46 165
Msa0035320 AT1G52360.3 34.800 250 138 4 4 231 10 256 3.79e-45 161
Msa0035320 AT1G52360.4 34.800 250 138 4 4 231 10 256 4.37e-45 161
Msa0035320 AT1G52360.1 34.800 250 138 4 4 231 10 256 4.37e-45 161
Msa0035320 AT1G52360.2 34.800 250 138 4 4 231 54 300 4.50e-45 161
Msa0035320 AT3G49660.1 25.591 254 156 3 4 231 66 312 9.49e-23 94.7
Msa0035320 AT3G49660.1 27.184 206 129 3 50 234 23 228 8.18e-21 89.4
Msa0035320 AT1G11160.3 28.025 157 113 0 12 168 19 175 1.02e-21 94.0
Msa0035320 AT1G11160.3 25.000 184 111 1 50 233 15 171 1.82e-17 81.6
Msa0035320 AT1G11160.3 24.800 125 90 2 6 127 94 217 2.07e-12 66.6
Msa0035320 AT1G11160.4 28.025 157 113 0 12 168 61 217 1.02e-21 94.0
Msa0035320 AT1G11160.4 24.464 233 148 2 2 233 8 213 8.91e-18 82.4
Msa0035320 AT1G11160.4 25.253 198 120 4 39 235 3 173 7.50e-17 79.7
Msa0035320 AT1G11160.2 28.025 157 113 0 12 168 61 217 1.02e-21 94.0
Msa0035320 AT1G11160.2 24.464 233 148 2 2 233 8 213 8.94e-18 82.4
Msa0035320 AT1G11160.2 25.253 198 120 4 39 235 3 173 7.53e-17 79.7
Msa0035320 AT1G11160.1 28.025 157 113 0 12 168 61 217 1.02e-21 94.0
Msa0035320 AT1G11160.1 24.464 233 148 2 2 233 8 213 8.95e-18 82.4
Msa0035320 AT1G11160.1 25.253 198 120 4 39 235 3 173 7.53e-17 79.7
Msa0035320 AT1G61210.3 27.461 193 136 2 9 197 58 250 2.51e-21 92.8
Msa0035320 AT1G61210.3 26.630 184 120 4 65 233 30 213 6.12e-17 80.1
Msa0035320 AT1G61210.3 22.222 126 97 1 2 127 135 259 1.09e-12 67.4
Msa0035320 AT1G61210.2 27.461 193 136 2 9 197 58 250 2.78e-21 92.8
Msa0035320 AT1G61210.2 26.630 184 120 4 65 233 30 213 6.76e-17 80.1
Msa0035320 AT1G61210.2 22.222 126 97 1 2 127 135 259 1.16e-12 67.4
Msa0035320 AT1G61210.1 27.461 193 136 2 9 197 58 250 2.80e-21 92.8
Msa0035320 AT1G61210.1 26.630 184 120 4 65 233 30 213 6.64e-17 80.1
Msa0035320 AT1G61210.1 22.222 126 97 1 2 127 135 259 1.15e-12 67.4
Msa0035320 AT5G08390.1 25.625 160 119 0 9 168 59 218 2.27e-19 87.0
Msa0035320 AT5G08390.1 26.178 191 113 3 44 233 9 172 4.13e-17 80.5
Msa0035320 AT5G08390.1 23.881 201 126 1 33 233 41 214 7.15e-14 70.9
Msa0035320 AT5G23430.3 25.000 180 134 1 9 187 59 238 3.07e-19 86.7
Msa0035320 AT5G23430.3 25.926 189 112 3 44 231 9 170 1.35e-16 79.0
Msa0035320 AT5G23430.2 25.000 180 134 1 9 187 59 238 3.07e-19 86.7
Msa0035320 AT5G23430.2 25.926 189 112 3 44 231 9 170 1.35e-16 79.0
Msa0035320 AT5G23430.1 25.000 180 134 1 9 187 59 238 3.28e-19 86.7
Msa0035320 AT5G23430.1 25.926 189 112 3 44 231 9 170 1.44e-16 79.0
Msa0035320 AT4G02730.1 27.513 189 109 3 44 231 36 197 2.17e-18 82.8
Msa0035320 AT4G02730.1 29.231 130 91 1 35 163 69 198 1.84e-15 74.7
Msa0035320 AT4G02730.1 22.957 257 176 6 1 235 77 333 4.74e-14 70.9
Msa0035320 AT4G15900.1 23.894 226 145 2 12 237 179 377 2.51e-18 84.0
Msa0035320 AT4G15900.1 26.630 184 108 1 50 233 175 331 8.31e-17 79.3
Msa0035320 AT4G15900.1 25.828 151 112 0 10 160 219 369 1.76e-14 72.4
Msa0035320 AT1G73720.1 30.952 168 107 2 4 163 209 375 2.77e-18 83.6
Msa0035320 AT3G16650.1 28.218 202 131 3 50 237 169 370 2.96e-18 83.6
Msa0035320 AT3G16650.1 27.451 153 110 1 12 164 173 324 5.20e-17 80.1
Msa0035320 AT3G16650.1 20.902 244 170 4 11 232 214 456 4.53e-11 62.4
Msa0035320 AT5G16750.1 25.543 184 131 2 3 180 54 237 1.65e-17 81.6
Msa0035320 AT5G16750.1 26.220 164 100 3 74 233 382 528 2.17e-16 78.6
Msa0035320 AT3G21540.1 29.104 134 95 0 31 164 86 219 7.58e-17 79.7
Msa0035320 AT1G18080.1 32.258 155 98 3 31 179 85 238 1.43e-16 77.8
Msa0035320 AT5G25150.2 25.625 160 119 0 9 168 418 577 1.85e-16 78.6
Msa0035320 AT5G25150.2 31.304 115 79 0 50 164 417 531 3.31e-12 65.9
Msa0035320 AT5G25150.1 25.625 160 119 0 9 168 418 577 1.96e-16 78.6
Msa0035320 AT5G25150.1 31.304 115 79 0 50 164 417 531 3.19e-12 66.2
Msa0035320 AT1G48630.1 31.169 154 100 3 31 179 85 237 3.96e-16 76.6
Msa0035320 AT1G48630.1 25.114 219 128 4 24 233 31 222 2.95e-12 65.5
Msa0035320 AT3G18130.1 31.169 154 100 3 31 179 85 237 4.91e-16 76.3
Msa0035320 AT3G18130.1 29.286 140 95 2 37 172 49 188 1.43e-11 63.5
Msa0035320 AT4G11110.1 28.641 206 140 7 21 222 785 987 9.88e-16 76.6
Msa0035320 AT2G41500.1 22.034 236 156 2 1 235 331 539 1.52e-15 75.9
Msa0035320 AT2G41500.2 22.034 236 156 2 1 235 331 539 1.52e-15 75.9
Msa0035320 AT2G43770.1 24.537 216 125 5 22 228 152 338 1.56e-15 75.1
Msa0035320 AT3G18140.1 21.941 237 149 5 5 233 74 282 9.88e-15 72.4
Msa0035320 AT1G15440.2 25.714 175 113 3 74 231 330 504 5.85e-14 71.2
Msa0035320 AT1G15440.1 25.714 175 113 3 74 231 370 544 6.37e-14 71.2
Msa0035320 AT1G49040.1 23.810 147 108 2 24 168 953 1097 1.73e-13 70.1
Msa0035320 AT5G13480.2 24.020 204 128 2 32 234 241 418 1.83e-13 69.7
Msa0035320 AT5G13480.2 28.671 143 102 0 24 166 149 291 2.36e-13 69.3
Msa0035320 AT5G13480.3 28.671 143 102 0 24 166 126 268 2.09e-13 69.7
Msa0035320 AT5G13480.3 24.020 204 128 2 32 234 218 395 2.11e-13 69.3
Msa0035320 AT5G13480.4 24.020 204 128 2 32 234 218 395 2.14e-13 69.3
Msa0035320 AT5G13480.4 28.671 143 102 0 24 166 126 268 2.16e-13 69.3
Msa0035320 AT5G13480.1 24.020 204 128 2 32 234 230 407 2.24e-13 69.3
Msa0035320 AT5G13480.1 28.671 143 102 0 24 166 138 280 2.26e-13 69.3
Msa0035320 AT2G47410.6 29.341 167 106 2 9 163 3 169 3.56e-13 68.9
Msa0035320 AT2G47410.3 29.341 167 106 2 9 163 3 169 3.56e-13 68.9
Msa0035320 AT2G47410.4 29.341 167 106 2 9 163 3 169 3.94e-13 68.9
Msa0035320 AT2G47410.1 29.341 167 106 2 9 163 185 351 4.28e-13 68.9
Msa0035320 AT2G47410.5 29.341 167 106 2 9 163 185 351 4.48e-13 68.9
Msa0035320 AT2G47410.2 29.341 167 106 2 9 163 184 350 4.52e-13 68.9
Msa0035320 AT5G60940.2 22.053 263 170 9 1 232 76 334 1.58e-12 66.2
Msa0035320 AT5G64730.1 22.545 275 152 7 17 232 26 298 2.22e-12 65.9
Msa0035320 AT5G60940.1 22.053 263 170 9 1 232 168 426 2.38e-12 66.2
Msa0035320 AT3G44530.2 27.000 200 85 5 66 234 28 197 3.06e-12 66.2
Msa0035320 AT3G44530.1 27.000 200 85 5 66 234 28 197 3.28e-12 66.2
Msa0035320 AT2G26060.2 23.887 247 152 8 2 231 13 240 5.16e-12 64.7
Msa0035320 AT2G26060.1 23.887 247 152 8 2 231 13 240 5.47e-12 64.7
Msa0035320 AT4G32551.2 26.289 194 128 7 54 233 692 884 7.03e-12 65.1
Msa0035320 AT4G32551.1 26.289 194 128 7 54 233 654 846 8.18e-12 65.1
Msa0035320 AT5G54200.1 28.659 164 93 6 23 164 377 538 2.01e-11 63.9
Msa0035320 AT5G52820.1 27.168 173 98 4 61 232 327 472 2.03e-11 63.5
Msa0035320 AT2G47990.1 31.818 154 102 3 12 163 55 207 3.32e-11 62.8
Msa0035320 AT1G10580.1 23.868 243 153 7 21 237 252 488 3.72e-11 62.8
Msa0035320 AT3G15470.1 42.667 75 40 3 91 164 511 583 5.49e-11 62.4
Msa0035320 AT4G29830.1 25.714 140 97 2 31 163 180 319 5.72e-11 61.6

Find 78 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCATGATCGCGGGGTTAAT+TGG 0.169053 1_1:-63451750 Msa0035320:CDS
AATGGTGATGTGTGTGATTT+GGG 0.243520 1_1:+63452482 None:intergenic
GTTCGTCGAATTTGTCAATT+AGG 0.253137 1_1:+63452320 None:intergenic
AGGTGATGATTACAAGATTA+AGG 0.256980 1_1:-63452148 Msa0035320:CDS
GCGAGGATCCATGGACGTTT+AGG 0.269888 1_1:+63452391 None:intergenic
CAGTGGCGTCATTCAGCTTT+GGG 0.272430 1_1:-63452359 Msa0035320:CDS
GATGTGTGTGATTTGGGATT+AGG 0.273420 1_1:+63452488 None:intergenic
CATCCGCAGCAGAGACAATA+AGG 0.277689 1_1:+63451704 None:intergenic
GTGATTTGGGATTAGGGTTA+TGG 0.291595 1_1:+63452495 None:intergenic
ACTGTTCGCGTTTGGGATAT+TGG 0.294582 1_1:-63451883 Msa0035320:CDS
ATGTGTGTGATTTGGGATTA+GGG 0.296495 1_1:+63452489 None:intergenic
TGGATCAGACTGTTCGCGTT+TGG 0.296859 1_1:-63451891 Msa0035320:CDS
AGACACAACAAGATCATCTT+TGG 0.307346 1_1:+63451921 None:intergenic
AGGTGTTTGTTTACTTTGTT+AGG 0.314444 1_1:-63452105 Msa0035320:CDS
GGATCAGACTGTTCGCGTTT+GGG 0.316696 1_1:-63451890 Msa0035320:CDS
ATGATAGGCAAGTTAAGATT+TGG 0.329967 1_1:-63451684 Msa0035320:CDS
TTCTGAGAACCCTCCTCTTC+GGG 0.340726 1_1:+63452589 None:intergenic
CGAGGATCCATGGACGTTTA+GGG 0.351997 1_1:+63452392 None:intergenic
ACAGTGGCGTCATTCAGCTT+TGG 0.366042 1_1:-63452360 Msa0035320:CDS
TAATGGTGATGTGTGTGATT+TGG 0.369666 1_1:+63452481 None:intergenic
AACACGACGGTCCCGTTCGC+GGG 0.371966 1_1:-63452300 Msa0035320:CDS
ATGATCAAACCATTCGAATC+TGG 0.384961 1_1:-63452017 Msa0035320:CDS
TTGTCTCTGCTGCGGATGAT+AGG 0.389615 1_1:-63451699 Msa0035320:CDS
CTTCTGAGAACCCTCCTCTT+CGG 0.394926 1_1:+63452588 None:intergenic
ACCCTTCACTCTGTTACTCT+TGG 0.408012 1_1:+63452426 None:intergenic
TCTCAACCTCTCTTCGTCTC+TGG 0.408030 1_1:-63452262 Msa0035320:CDS
TGCTGTTGTTAAGTATGTTT+TGG 0.413230 1_1:-63451776 Msa0035320:CDS
TCATGATCGCGGGGTTAATT+GGG 0.415738 1_1:-63451749 Msa0035320:CDS
ACATCTTCGAGAGAGGTTAA+TGG 0.419971 1_1:+63452464 None:intergenic
ATGATTACAAGATTAAGGTT+TGG 0.430375 1_1:-63452143 Msa0035320:CDS
GTTAAGATTTGGAGGATGAA+TGG 0.438263 1_1:-63451673 Msa0035320:CDS
TTCGTCGAATTTGTCAATTA+GGG 0.440246 1_1:+63452321 None:intergenic
TGAAAATGAACCCCGCGAAC+GGG 0.445544 1_1:+63452289 None:intergenic
TCTTGTTGTGTCTGCGTCGT+TGG 0.460881 1_1:-63451911 Msa0035320:CDS
GAACACGACGGTCCCGTTCG+CGG 0.464333 1_1:-63452301 Msa0035320:CDS
CATGATGAAATTGAACGGTT+CGG 0.466638 1_1:+63452067 None:intergenic
GTGAAAATGAACCCCGCGAA+CGG 0.468162 1_1:+63452288 None:intergenic
AAACCATTCGAATCTGGAAC+TGG 0.485166 1_1:-63452011 Msa0035320:CDS
GACACAACAAGATCATCTTT+GGG 0.491048 1_1:+63451922 None:intergenic
CAGCTTTGGGATTACCGTAT+GGG 0.497527 1_1:-63452346 Msa0035320:CDS
GGGATATTGGATCGTTGAAA+AGG 0.500627 1_1:-63451870 Msa0035320:CDS
ATCCGCAGCAGAGACAATAA+GGG 0.510819 1_1:+63451705 None:intergenic
GCGGATGATATATTGAGGTT+GGG 0.514766 1_1:-63451832 Msa0035320:CDS
TCAGCTTTGGGATTACCGTA+TGG 0.515680 1_1:-63452347 Msa0035320:CDS
GAGACAATAAGGGGCAATGT+TGG 0.518990 1_1:+63451715 None:intergenic
GGCGGATGATATATTGAGGT+TGG 0.522115 1_1:-63451833 Msa0035320:CDS
ATAGGCAAGTTAAGATTTGG+AGG 0.531307 1_1:-63451681 Msa0035320:CDS
GAAAAGGAAGAGTGCTTCAC+CGG 0.545410 1_1:-63451854 Msa0035320:CDS
CACCGGCGGATGATATATTG+AGG 0.545859 1_1:-63451837 Msa0035320:CDS
TGGAGACTAGCGAGGATCCA+TGG 0.547411 1_1:+63452382 None:intergenic
ACCAAGAGTAACAGAGTGAA+GGG 0.552759 1_1:-63452427 Msa0035320:CDS
TTTGGAACTATAAGCTGCAT+AGG 0.555072 1_1:-63452125 Msa0035320:CDS
CTGCCAGTTCCAGATTCGAA+TGG 0.556517 1_1:+63452008 None:intergenic
AATTTCATCATGAGAGTCCG+TGG 0.563112 1_1:-63452056 Msa0035320:CDS
CGTATATGCTCCCGAAGAGG+AGG 0.565597 1_1:-63452599 Msa0035320:five_prime_UTR
GCCCCTTATTGTCTCTGCTG+CGG 0.572464 1_1:-63451707 Msa0035320:CDS
AGAGAGAAGAAAGAAAGAGA+AGG 0.573036 1_1:+63452531 None:intergenic
GTTTCCACCCTAAACGTCCA+TGG 0.575277 1_1:-63452399 Msa0035320:CDS
CAACCTCTCTTCGTCTCTGG+AGG 0.581935 1_1:-63452259 Msa0035320:intron
CGAAGAGGAGGGTTCTCAGA+AGG 0.582807 1_1:-63452587 Msa0035320:five_prime_UTR
AACCAAGAGTAACAGAGTGA+AGG 0.586987 1_1:-63452428 Msa0035320:CDS
TTCGTCAACATCTTCGAGAG+AGG 0.593363 1_1:+63452457 None:intergenic
AACCTCAATATATCATCCGC+CGG 0.599514 1_1:+63451835 None:intergenic
TGTCAATTAGGGTTCCCATA+CGG 0.613837 1_1:+63452332 None:intergenic
ACACGACGGTCCCGTTCGCG+GGG 0.619176 1_1:-63452299 Msa0035320:CDS
TCACTCGCACTCACAATCCA+CGG 0.625117 1_1:+63452039 None:intergenic
TTACCTCCAGAGACGAAGAG+AGG 0.626518 1_1:+63452256 None:intergenic
GGATCCATGGACGTTTAGGG+TGG 0.639666 1_1:+63452395 None:intergenic
GACAAATTCGACGAACACGA+CGG 0.642809 1_1:-63452313 Msa0035320:CDS
GTATATGCTCCCGAAGAGGA+GGG 0.664212 1_1:-63452598 Msa0035320:five_prime_UTR
TCCGCAGCAGAGACAATAAG+GGG 0.665792 1_1:+63451706 None:intergenic
AAGGAAGAGTGCTTCACCGG+CGG 0.667871 1_1:-63451851 Msa0035320:CDS
ACTCTCATGATGAAATTGAA+CGG 0.668399 1_1:+63452062 None:intergenic
AATCGTATATGCTCCCGAAG+AGG 0.685514 1_1:-63452602 Msa0035320:five_prime_UTR
TTTGGAAGGTCATGATCGCG+GGG 0.685932 1_1:-63451758 Msa0035320:CDS
AAAGCTGAATGACGCCACTG+TGG 0.723712 1_1:+63452362 None:intergenic
CGCCACTGTGGAGACTAGCG+AGG 0.740673 1_1:+63452374 None:intergenic
ATCCTCGCTAGTCTCCACAG+TGG 0.818902 1_1:-63452376 Msa0035320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTAATTGAAATTTTC+AGG - chr1_1:63452118-63452137 Msa0035320:CDS 15.0%
!!! TTTGATTAATTGAAATTTTC+AGG - chr1_1:63452118-63452137 Msa0035320:CDS 15.0%
! ATGATTACAAGATTAAGGTT+TGG - chr1_1:63452143-63452162 Msa0035320:CDS 25.0%
! ATGATTACAAGATTAAGGTT+TGG - chr1_1:63452143-63452162 Msa0035320:CDS 25.0%
TTCGTCGAATTTGTCAATTA+GGG + chr1_1:63451968-63451987 None:intergenic 30.0%
AGGTGATGATTACAAGATTA+AGG - chr1_1:63452138-63452157 Msa0035320:CDS 30.0%
AGGTGTTTGTTTACTTTGTT+AGG - chr1_1:63452181-63452200 Msa0035320:intron 30.0%
ACTCTCATGATGAAATTGAA+CGG + chr1_1:63452227-63452246 None:intergenic 30.0%
! CAGATGAATACTGATCTTTT+TGG - chr1_1:63452478-63452497 Msa0035320:five_prime_UTR 30.0%
! ATGAATACTGATCTTTTTGG+TGG - chr1_1:63452481-63452500 Msa0035320:five_prime_UTR 30.0%
! TGCTGTTGTTAAGTATGTTT+TGG - chr1_1:63452510-63452529 Msa0035320:five_prime_UTR 30.0%
!! GTTGTTAAGTATGTTTTGGA+AGG - chr1_1:63452514-63452533 Msa0035320:five_prime_UTR 30.0%
ATGATAGGCAAGTTAAGATT+TGG - chr1_1:63452602-63452621 Msa0035320:five_prime_UTR 30.0%
TTCGTCGAATTTGTCAATTA+GGG + chr1_1:63451968-63451987 None:intergenic 30.0%
AGGTGATGATTACAAGATTA+AGG - chr1_1:63452138-63452157 Msa0035320:CDS 30.0%
AGGTGTTTGTTTACTTTGTT+AGG - chr1_1:63452181-63452200 Msa0035320:intron 30.0%
ACTCTCATGATGAAATTGAA+CGG + chr1_1:63452227-63452246 None:intergenic 30.0%
! CAGATGAATACTGATCTTTT+TGG - chr1_1:63452478-63452497 Msa0035320:five_prime_UTR 30.0%
! ATGAATACTGATCTTTTTGG+TGG - chr1_1:63452481-63452500 Msa0035320:five_prime_UTR 30.0%
! TGCTGTTGTTAAGTATGTTT+TGG - chr1_1:63452510-63452529 Msa0035320:five_prime_UTR 30.0%
!! GTTGTTAAGTATGTTTTGGA+AGG - chr1_1:63452514-63452533 Msa0035320:five_prime_UTR 30.0%
ATGATAGGCAAGTTAAGATT+TGG - chr1_1:63452602-63452621 Msa0035320:five_prime_UTR 30.0%
AGAGAGAAGAAAGAAAGAGA+AGG + chr1_1:63451758-63451777 None:intergenic 35.0%
! ATGTGTGTGATTTGGGATTA+GGG + chr1_1:63451800-63451819 None:intergenic 35.0%
! AATGGTGATGTGTGTGATTT+GGG + chr1_1:63451807-63451826 None:intergenic 35.0%
! TAATGGTGATGTGTGTGATT+TGG + chr1_1:63451808-63451827 None:intergenic 35.0%
GTTCGTCGAATTTGTCAATT+AGG + chr1_1:63451969-63451988 None:intergenic 35.0%
! TTTGGAACTATAAGCTGCAT+AGG - chr1_1:63452161-63452180 Msa0035320:intron 35.0%
CATGATGAAATTGAACGGTT+CGG + chr1_1:63452222-63452241 None:intergenic 35.0%
ATGATCAAACCATTCGAATC+TGG - chr1_1:63452269-63452288 Msa0035320:CDS 35.0%
!!! ACTTGCATTTCTGTTTTGAC+TGG - chr1_1:63452307-63452326 Msa0035320:CDS 35.0%
GACACAACAAGATCATCTTT+GGG + chr1_1:63452367-63452386 None:intergenic 35.0%
AGACACAACAAGATCATCTT+TGG + chr1_1:63452368-63452387 None:intergenic 35.0%
ATAGGCAAGTTAAGATTTGG+AGG - chr1_1:63452605-63452624 Msa0035320:five_prime_UTR 35.0%
GTTAAGATTTGGAGGATGAA+TGG - chr1_1:63452613-63452632 Msa0035320:five_prime_UTR 35.0%
AGAGAGAAGAAAGAAAGAGA+AGG + chr1_1:63451758-63451777 None:intergenic 35.0%
! ATGTGTGTGATTTGGGATTA+GGG + chr1_1:63451800-63451819 None:intergenic 35.0%
! AATGGTGATGTGTGTGATTT+GGG + chr1_1:63451807-63451826 None:intergenic 35.0%
! TAATGGTGATGTGTGTGATT+TGG + chr1_1:63451808-63451827 None:intergenic 35.0%
GTTCGTCGAATTTGTCAATT+AGG + chr1_1:63451969-63451988 None:intergenic 35.0%
! TTTGGAACTATAAGCTGCAT+AGG - chr1_1:63452161-63452180 Msa0035320:intron 35.0%
CATGATGAAATTGAACGGTT+CGG + chr1_1:63452222-63452241 None:intergenic 35.0%
ATGATCAAACCATTCGAATC+TGG - chr1_1:63452269-63452288 Msa0035320:CDS 35.0%
!!! ACTTGCATTTCTGTTTTGAC+TGG - chr1_1:63452307-63452326 Msa0035320:CDS 35.0%
GACACAACAAGATCATCTTT+GGG + chr1_1:63452367-63452386 None:intergenic 35.0%
AGACACAACAAGATCATCTT+TGG + chr1_1:63452368-63452387 None:intergenic 35.0%
ATAGGCAAGTTAAGATTTGG+AGG - chr1_1:63452605-63452624 Msa0035320:five_prime_UTR 35.0%
GTTAAGATTTGGAGGATGAA+TGG - chr1_1:63452613-63452632 Msa0035320:five_prime_UTR 35.0%
! GTGATTTGGGATTAGGGTTA+TGG + chr1_1:63451794-63451813 None:intergenic 40.0%
! GATGTGTGTGATTTGGGATT+AGG + chr1_1:63451801-63451820 None:intergenic 40.0%
ACATCTTCGAGAGAGGTTAA+TGG + chr1_1:63451825-63451844 None:intergenic 40.0%
AACCAAGAGTAACAGAGTGA+AGG - chr1_1:63451858-63451877 Msa0035320:CDS 40.0%
ACCAAGAGTAACAGAGTGAA+GGG - chr1_1:63451859-63451878 Msa0035320:CDS 40.0%
TGTCAATTAGGGTTCCCATA+CGG + chr1_1:63451957-63451976 None:intergenic 40.0%
AATTTCATCATGAGAGTCCG+TGG - chr1_1:63452230-63452249 Msa0035320:intron 40.0%
! AAACCATTCGAATCTGGAAC+TGG - chr1_1:63452275-63452294 Msa0035320:CDS 40.0%
GGGATATTGGATCGTTGAAA+AGG - chr1_1:63452416-63452435 Msa0035320:CDS 40.0%
AACCTCAATATATCATCCGC+CGG + chr1_1:63452454-63452473 None:intergenic 40.0%
GCGGATGATATATTGAGGTT+GGG - chr1_1:63452454-63452473 Msa0035320:exon 40.0%
! GTGATTTGGGATTAGGGTTA+TGG + chr1_1:63451794-63451813 None:intergenic 40.0%
! GATGTGTGTGATTTGGGATT+AGG + chr1_1:63451801-63451820 None:intergenic 40.0%
ACATCTTCGAGAGAGGTTAA+TGG + chr1_1:63451825-63451844 None:intergenic 40.0%
AACCAAGAGTAACAGAGTGA+AGG - chr1_1:63451858-63451877 Msa0035320:CDS 40.0%
ACCAAGAGTAACAGAGTGAA+GGG - chr1_1:63451859-63451878 Msa0035320:CDS 40.0%
TGTCAATTAGGGTTCCCATA+CGG + chr1_1:63451957-63451976 None:intergenic 40.0%
AATTTCATCATGAGAGTCCG+TGG - chr1_1:63452230-63452249 Msa0035320:intron 40.0%
! AAACCATTCGAATCTGGAAC+TGG - chr1_1:63452275-63452294 Msa0035320:CDS 40.0%
GGGATATTGGATCGTTGAAA+AGG - chr1_1:63452416-63452435 Msa0035320:CDS 40.0%
AACCTCAATATATCATCCGC+CGG + chr1_1:63452454-63452473 None:intergenic 40.0%
GCGGATGATATATTGAGGTT+GGG - chr1_1:63452454-63452473 Msa0035320:exon 40.0%
AATCGTATATGCTCCCGAAG+AGG - chr1_1:63451684-63451703 Msa0035320:CDS 45.0%
TTCGTCAACATCTTCGAGAG+AGG + chr1_1:63451832-63451851 None:intergenic 45.0%
ACCCTTCACTCTGTTACTCT+TGG + chr1_1:63451863-63451882 None:intergenic 45.0%
!! TCAGCTTTGGGATTACCGTA+TGG - chr1_1:63451939-63451958 Msa0035320:CDS 45.0%
!! CAGCTTTGGGATTACCGTAT+GGG - chr1_1:63451940-63451959 Msa0035320:CDS 45.0%
GACAAATTCGACGAACACGA+CGG - chr1_1:63451973-63451992 Msa0035320:CDS 45.0%
! ACTGTTCGCGTTTGGGATAT+TGG - chr1_1:63452403-63452422 Msa0035320:CDS 45.0%
!! GAAAAGGAAGAGTGCTTCAC+CGG - chr1_1:63452432-63452451 Msa0035320:CDS 45.0%
GGCGGATGATATATTGAGGT+TGG - chr1_1:63452453-63452472 Msa0035320:exon 45.0%
!!! GTTTTGGAAGGTCATGATCG+CGG - chr1_1:63452526-63452545 Msa0035320:five_prime_UTR 45.0%
!! TTTTGGAAGGTCATGATCGC+GGG - chr1_1:63452527-63452546 Msa0035320:five_prime_UTR 45.0%
TCATGATCGCGGGGTTAATT+GGG - chr1_1:63452537-63452556 Msa0035320:five_prime_UTR 45.0%
GAGACAATAAGGGGCAATGT+TGG + chr1_1:63452574-63452593 None:intergenic 45.0%
ATCCGCAGCAGAGACAATAA+GGG + chr1_1:63452584-63452603 None:intergenic 45.0%
AATCGTATATGCTCCCGAAG+AGG - chr1_1:63451684-63451703 Msa0035320:CDS 45.0%
TTCGTCAACATCTTCGAGAG+AGG + chr1_1:63451832-63451851 None:intergenic 45.0%
ACCCTTCACTCTGTTACTCT+TGG + chr1_1:63451863-63451882 None:intergenic 45.0%
!! TCAGCTTTGGGATTACCGTA+TGG - chr1_1:63451939-63451958 Msa0035320:CDS 45.0%
!! CAGCTTTGGGATTACCGTAT+GGG - chr1_1:63451940-63451959 Msa0035320:CDS 45.0%
GACAAATTCGACGAACACGA+CGG - chr1_1:63451973-63451992 Msa0035320:CDS 45.0%
! ACTGTTCGCGTTTGGGATAT+TGG - chr1_1:63452403-63452422 Msa0035320:CDS 45.0%
!! GAAAAGGAAGAGTGCTTCAC+CGG - chr1_1:63452432-63452451 Msa0035320:CDS 45.0%
GGCGGATGATATATTGAGGT+TGG - chr1_1:63452453-63452472 Msa0035320:exon 45.0%
!!! GTTTTGGAAGGTCATGATCG+CGG - chr1_1:63452526-63452545 Msa0035320:five_prime_UTR 45.0%
!! TTTTGGAAGGTCATGATCGC+GGG - chr1_1:63452527-63452546 Msa0035320:five_prime_UTR 45.0%
TCATGATCGCGGGGTTAATT+GGG - chr1_1:63452537-63452556 Msa0035320:five_prime_UTR 45.0%
GAGACAATAAGGGGCAATGT+TGG + chr1_1:63452574-63452593 None:intergenic 45.0%
ATCCGCAGCAGAGACAATAA+GGG + chr1_1:63452584-63452603 None:intergenic 45.0%
GTATATGCTCCCGAAGAGGA+GGG - chr1_1:63451688-63451707 Msa0035320:CDS 50.0%
! TTCTGAGAACCCTCCTCTTC+GGG + chr1_1:63451700-63451719 None:intergenic 50.0%
! CTTCTGAGAACCCTCCTCTT+CGG + chr1_1:63451701-63451720 None:intergenic 50.0%
GTTTCCACCCTAAACGTCCA+TGG - chr1_1:63451887-63451906 Msa0035320:CDS 50.0%
CGAGGATCCATGGACGTTTA+GGG + chr1_1:63451897-63451916 None:intergenic 50.0%
AAAGCTGAATGACGCCACTG+TGG + chr1_1:63451927-63451946 None:intergenic 50.0%
ACAGTGGCGTCATTCAGCTT+TGG - chr1_1:63451926-63451945 Msa0035320:CDS 50.0%
CAGTGGCGTCATTCAGCTTT+GGG - chr1_1:63451927-63451946 Msa0035320:CDS 50.0%
TGAAAATGAACCCCGCGAAC+GGG + chr1_1:63452000-63452019 None:intergenic 50.0%
GTGAAAATGAACCCCGCGAA+CGG + chr1_1:63452001-63452020 None:intergenic 50.0%
TCTCAACCTCTCTTCGTCTC+TGG - chr1_1:63452024-63452043 Msa0035320:CDS 50.0%
TTACCTCCAGAGACGAAGAG+AGG + chr1_1:63452033-63452052 None:intergenic 50.0%
TCACTCGCACTCACAATCCA+CGG + chr1_1:63452250-63452269 None:intergenic 50.0%
CTGCCAGTTCCAGATTCGAA+TGG + chr1_1:63452281-63452300 None:intergenic 50.0%
! TCTTGTTGTGTCTGCGTCGT+TGG - chr1_1:63452375-63452394 Msa0035320:CDS 50.0%
TGGATCAGACTGTTCGCGTT+TGG - chr1_1:63452395-63452414 Msa0035320:CDS 50.0%
GGATCAGACTGTTCGCGTTT+GGG - chr1_1:63452396-63452415 Msa0035320:CDS 50.0%
CACCGGCGGATGATATATTG+AGG - chr1_1:63452449-63452468 Msa0035320:exon 50.0%
TTTGGAAGGTCATGATCGCG+GGG - chr1_1:63452528-63452547 Msa0035320:five_prime_UTR 50.0%
GTCATGATCGCGGGGTTAAT+TGG - chr1_1:63452536-63452555 Msa0035320:five_prime_UTR 50.0%
TCCGCAGCAGAGACAATAAG+GGG + chr1_1:63452583-63452602 None:intergenic 50.0%
CATCCGCAGCAGAGACAATA+AGG + chr1_1:63452585-63452604 None:intergenic 50.0%
TTGTCTCTGCTGCGGATGAT+AGG - chr1_1:63452587-63452606 Msa0035320:five_prime_UTR 50.0%
GTATATGCTCCCGAAGAGGA+GGG - chr1_1:63451688-63451707 Msa0035320:CDS 50.0%
! TTCTGAGAACCCTCCTCTTC+GGG + chr1_1:63451700-63451719 None:intergenic 50.0%
! CTTCTGAGAACCCTCCTCTT+CGG + chr1_1:63451701-63451720 None:intergenic 50.0%
GTTTCCACCCTAAACGTCCA+TGG - chr1_1:63451887-63451906 Msa0035320:CDS 50.0%
CGAGGATCCATGGACGTTTA+GGG + chr1_1:63451897-63451916 None:intergenic 50.0%
AAAGCTGAATGACGCCACTG+TGG + chr1_1:63451927-63451946 None:intergenic 50.0%
ACAGTGGCGTCATTCAGCTT+TGG - chr1_1:63451926-63451945 Msa0035320:CDS 50.0%
CAGTGGCGTCATTCAGCTTT+GGG - chr1_1:63451927-63451946 Msa0035320:CDS 50.0%
TGAAAATGAACCCCGCGAAC+GGG + chr1_1:63452000-63452019 None:intergenic 50.0%
GTGAAAATGAACCCCGCGAA+CGG + chr1_1:63452001-63452020 None:intergenic 50.0%
TCTCAACCTCTCTTCGTCTC+TGG - chr1_1:63452024-63452043 Msa0035320:CDS 50.0%
TTACCTCCAGAGACGAAGAG+AGG + chr1_1:63452033-63452052 None:intergenic 50.0%
TCACTCGCACTCACAATCCA+CGG + chr1_1:63452250-63452269 None:intergenic 50.0%
CTGCCAGTTCCAGATTCGAA+TGG + chr1_1:63452281-63452300 None:intergenic 50.0%
! TCTTGTTGTGTCTGCGTCGT+TGG - chr1_1:63452375-63452394 Msa0035320:CDS 50.0%
TGGATCAGACTGTTCGCGTT+TGG - chr1_1:63452395-63452414 Msa0035320:CDS 50.0%
GGATCAGACTGTTCGCGTTT+GGG - chr1_1:63452396-63452415 Msa0035320:CDS 50.0%
CACCGGCGGATGATATATTG+AGG - chr1_1:63452449-63452468 Msa0035320:exon 50.0%
TTTGGAAGGTCATGATCGCG+GGG - chr1_1:63452528-63452547 Msa0035320:five_prime_UTR 50.0%
GTCATGATCGCGGGGTTAAT+TGG - chr1_1:63452536-63452555 Msa0035320:five_prime_UTR 50.0%
TCCGCAGCAGAGACAATAAG+GGG + chr1_1:63452583-63452602 None:intergenic 50.0%
CATCCGCAGCAGAGACAATA+AGG + chr1_1:63452585-63452604 None:intergenic 50.0%
TTGTCTCTGCTGCGGATGAT+AGG - chr1_1:63452587-63452606 Msa0035320:five_prime_UTR 50.0%
CGTATATGCTCCCGAAGAGG+AGG - chr1_1:63451687-63451706 Msa0035320:CDS 55.0%
CGAAGAGGAGGGTTCTCAGA+AGG - chr1_1:63451699-63451718 Msa0035320:CDS 55.0%
GGATCCATGGACGTTTAGGG+TGG + chr1_1:63451894-63451913 None:intergenic 55.0%
GCGAGGATCCATGGACGTTT+AGG + chr1_1:63451898-63451917 None:intergenic 55.0%
TGGAGACTAGCGAGGATCCA+TGG + chr1_1:63451907-63451926 None:intergenic 55.0%
! ATCCTCGCTAGTCTCCACAG+TGG - chr1_1:63451910-63451929 Msa0035320:CDS 55.0%
CAACCTCTCTTCGTCTCTGG+AGG - chr1_1:63452027-63452046 Msa0035320:CDS 55.0%
!! AAGGAAGAGTGCTTCACCGG+CGG - chr1_1:63452435-63452454 Msa0035320:CDS 55.0%
GCCCCTTATTGTCTCTGCTG+CGG - chr1_1:63452579-63452598 Msa0035320:five_prime_UTR 55.0%
CGTATATGCTCCCGAAGAGG+AGG - chr1_1:63451687-63451706 Msa0035320:CDS 55.0%
CGAAGAGGAGGGTTCTCAGA+AGG - chr1_1:63451699-63451718 Msa0035320:CDS 55.0%
GGATCCATGGACGTTTAGGG+TGG + chr1_1:63451894-63451913 None:intergenic 55.0%
GCGAGGATCCATGGACGTTT+AGG + chr1_1:63451898-63451917 None:intergenic 55.0%
TGGAGACTAGCGAGGATCCA+TGG + chr1_1:63451907-63451926 None:intergenic 55.0%
! ATCCTCGCTAGTCTCCACAG+TGG - chr1_1:63451910-63451929 Msa0035320:CDS 55.0%
CAACCTCTCTTCGTCTCTGG+AGG - chr1_1:63452027-63452046 Msa0035320:CDS 55.0%
!! AAGGAAGAGTGCTTCACCGG+CGG - chr1_1:63452435-63452454 Msa0035320:CDS 55.0%
GCCCCTTATTGTCTCTGCTG+CGG - chr1_1:63452579-63452598 Msa0035320:five_prime_UTR 55.0%
CGCCACTGTGGAGACTAGCG+AGG + chr1_1:63451915-63451934 None:intergenic 65.0%
GAACACGACGGTCCCGTTCG+CGG - chr1_1:63451985-63452004 Msa0035320:CDS 65.0%
AACACGACGGTCCCGTTCGC+GGG - chr1_1:63451986-63452005 Msa0035320:CDS 65.0%
CGCCACTGTGGAGACTAGCG+AGG + chr1_1:63451915-63451934 None:intergenic 65.0%
GAACACGACGGTCCCGTTCG+CGG - chr1_1:63451985-63452004 Msa0035320:CDS 65.0%
AACACGACGGTCCCGTTCGC+GGG - chr1_1:63451986-63452005 Msa0035320:CDS 65.0%
ACACGACGGTCCCGTTCGCG+GGG - chr1_1:63451987-63452006 Msa0035320:CDS 70.0%
ACACGACGGTCCCGTTCGCG+GGG - chr1_1:63451987-63452006 Msa0035320:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 63451663 63452645 63451663 ID=Msa0035320;Name=Msa0035320
chr1_1 mRNA 63451663 63452645 63451663 ID=Msa0035320-mRNA-1;Parent=Msa0035320;Name=Msa0035320-mRNA-1;_AED=0.21;_eAED=0.21;_QI=178|1|0.5|1|1|1|2|0|237
chr1_1 exon 63451663 63452168 63451663 ID=Msa0035320-mRNA-1:exon:20213;Parent=Msa0035320-mRNA-1
chr1_1 exon 63452260 63452645 63452260 ID=Msa0035320-mRNA-1:exon:20212;Parent=Msa0035320-mRNA-1
chr1_1 five_prime_UTR 63452468 63452645 63452468 ID=Msa0035320-mRNA-1:five_prime_utr;Parent=Msa0035320-mRNA-1
chr1_1 CDS 63452260 63452467 63452260 ID=Msa0035320-mRNA-1:cds;Parent=Msa0035320-mRNA-1
chr1_1 CDS 63451663 63452168 63451663 ID=Msa0035320-mRNA-1:cds;Parent=Msa0035320-mRNA-1
Gene Sequence

>Msa0035320

ATGTTGACGAAATTCGAAACCAAGAGTAACAGAGTGAAGGGTCTCAGTTTCCACCCTAAACGTCCATGGATCCTCGCTAGTCTCCACAGTGGCGTCATTCAGCTTTGGGATTACCGTATGGGAACCCTAATTGACAAATTCGACGAACACGACGGTCCCGTTCGCGGGGTTCATTTTCACAATTCTCAACCTCTCTTCGTCTCTGGAGGTGATGATTACAAGATTAAGGTTTGGAACTATAAGCTGCATAGGTGTTTGTTTACTTTGTTAGGTCATTTAGATTATATCCGAACCGTTCAATTTCATCATGAGAGTCCGTGGATTGTGAGTGCGAGTGATGATCAAACCATTCGAATCTGGAACTGGCAGTCACGTACTTGCATTTCTGTTTTGACTGGACACAATCATTACGTGATGTGTGCGCTTTTTCATCCCAAAGATGATCTTGTTGTGTCTGCGTCGTTGGATCAGACTGTTCGCGTTTGGGATATTGGATCGTTGAAAAGGAAGAGTGCTTCACCGGCGGATGATATATTGAGGTTGGGTCAGATGAATACTGATCTTTTTGGTGGTGTTGATGCTGTTGTTAAGTATGTTTTGGAAGGTCATGATCGCGGGGTTAATTGGGCTTCTTTTCATCCAACATTGCCCCTTATTGTCTCTGCTGCGGATGATAGGCAAGTTAAGATTTGGAGGATGAATGGTAAATATTGA
Protein sequence

>Msa0035320

MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDKFDEHDGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHESPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCALFHPKDDLVVSASLDQTVRVWDIGSLKRKSASPADDILRLGQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSAADDRQVKIWRMNGKY*