AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1219830


Find 264 sgRNAs with CRISPR-Local

Find 889 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_1 gene 82718691 82731531 82718691 ID=Msa1219830;Name=Msa1219830
chr8_1 mRNA 82718691 82731531 82718691 ID=Msa1219830-mRNA-1;Parent=Msa1219830;Name=Msa1219830-mRNA-1;_AED=0.11;_eAED=0.11;_QI=147|0.86|0.78|1|0.95|0.91|23|472|1227
chr8_1 exon 82718691 82719155 82718691 ID=Msa1219830-mRNA-1:exon:29613;Parent=Msa1219830-mRNA-1
chr8_1 exon 82719366 82719435 82719366 ID=Msa1219830-mRNA-1:exon:29612;Parent=Msa1219830-mRNA-1
chr8_1 exon 82720500 82720595 82720500 ID=Msa1219830-mRNA-1:exon:29611;Parent=Msa1219830-mRNA-1
chr8_1 exon 82720949 82721279 82720949 ID=Msa1219830-mRNA-1:exon:29610;Parent=Msa1219830-mRNA-1
chr8_1 exon 82721388 82721524 82721388 ID=Msa1219830-mRNA-1:exon:29609;Parent=Msa1219830-mRNA-1
chr8_1 exon 82722181 82722278 82722181 ID=Msa1219830-mRNA-1:exon:29608;Parent=Msa1219830-mRNA-1
chr8_1 exon 82722737 82722784 82722737 ID=Msa1219830-mRNA-1:exon:29607;Parent=Msa1219830-mRNA-1
chr8_1 exon 82723041 82723306 82723041 ID=Msa1219830-mRNA-1:exon:29606;Parent=Msa1219830-mRNA-1
chr8_1 exon 82723392 82723558 82723392 ID=Msa1219830-mRNA-1:exon:29605;Parent=Msa1219830-mRNA-1
chr8_1 exon 82725528 82725884 82725528 ID=Msa1219830-mRNA-1:exon:29604;Parent=Msa1219830-mRNA-1
chr8_1 exon 82726407 82726555 82726407 ID=Msa1219830-mRNA-1:exon:29603;Parent=Msa1219830-mRNA-1
chr8_1 exon 82726636 82726759 82726636 ID=Msa1219830-mRNA-1:exon:29602;Parent=Msa1219830-mRNA-1
chr8_1 exon 82726854 82726899 82726854 ID=Msa1219830-mRNA-1:exon:29601;Parent=Msa1219830-mRNA-1
chr8_1 exon 82727015 82727091 82727015 ID=Msa1219830-mRNA-1:exon:29600;Parent=Msa1219830-mRNA-1
chr8_1 exon 82727481 82727898 82727481 ID=Msa1219830-mRNA-1:exon:29599;Parent=Msa1219830-mRNA-1
chr8_1 exon 82728106 82728729 82728106 ID=Msa1219830-mRNA-1:exon:29598;Parent=Msa1219830-mRNA-1
chr8_1 exon 82729250 82729434 82729250 ID=Msa1219830-mRNA-1:exon:29597;Parent=Msa1219830-mRNA-1
chr8_1 exon 82729524 82729634 82729524 ID=Msa1219830-mRNA-1:exon:29596;Parent=Msa1219830-mRNA-1
chr8_1 exon 82729753 82729944 82729753 ID=Msa1219830-mRNA-1:exon:29595;Parent=Msa1219830-mRNA-1
chr8_1 exon 82730044 82730142 82730044 ID=Msa1219830-mRNA-1:exon:29594;Parent=Msa1219830-mRNA-1
chr8_1 exon 82730256 82730352 82730256 ID=Msa1219830-mRNA-1:exon:29593;Parent=Msa1219830-mRNA-1
chr8_1 exon 82731290 82731378 82731290 ID=Msa1219830-mRNA-1:exon:29592;Parent=Msa1219830-mRNA-1
chr8_1 exon 82731475 82731531 82731475 ID=Msa1219830-mRNA-1:exon:29591;Parent=Msa1219830-mRNA-1
chr8_1 five_prime_UTR 82731475 82731531 82731475 ID=Msa1219830-mRNA-1:five_prime_utr;Parent=Msa1219830-mRNA-1
chr8_1 five_prime_UTR 82731290 82731378 82731290 ID=Msa1219830-mRNA-1:five_prime_utr;Parent=Msa1219830-mRNA-1
chr8_1 five_prime_UTR 82730352 82730352 82730352 ID=Msa1219830-mRNA-1:five_prime_utr;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82730256 82730351 82730256 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82730044 82730142 82730044 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82729753 82729944 82729753 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82729524 82729634 82729524 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82729250 82729434 82729250 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82728106 82728729 82728106 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82727481 82727898 82727481 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82727015 82727091 82727015 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82726854 82726899 82726854 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82726636 82726759 82726636 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82726407 82726555 82726407 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82725528 82725884 82725528 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82723392 82723558 82723392 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82723041 82723306 82723041 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82722737 82722784 82722737 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82722181 82722278 82722181 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82721388 82721524 82721388 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82720949 82721279 82720949 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82720500 82720595 82720500 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 CDS 82719373 82719435 82719373 ID=Msa1219830-mRNA-1:cds;Parent=Msa1219830-mRNA-1
chr8_1 three_prime_UTR 82719366 82719372 82719366 ID=Msa1219830-mRNA-1:three_prime_utr;Parent=Msa1219830-mRNA-1
chr8_1 three_prime_UTR 82718691 82719155 82718691 ID=Msa1219830-mRNA-1:three_prime_utr;Parent=Msa1219830-mRNA-1
Gene Sequence

>Msa1219830

ATGTTAGAGAAAGTATGTAAGGATCCACAAATGCTTGTTGACATCTTTGTGAATTATGACTGTGATCTAGAGGCGCCAAACTTGTTTGAAAGAATGGTTACAACGCTGTCCAAAATAGCTCAAGGGATTCAAAATACTGATCCAAATTCGGTTGCTGCTTCTCAAACAGCTACAATTAAAGGTTCATCACTTCAGGGACTTGTGAGTGTTCTTAAATCACTGGTTGATTGGGAACAATCACATAGGGAATTGGAAAAGCTAAAGAATAATAAGCAAGAAGGGGTTTCAGGTGAAGATTCTTTTGAAATAAGATCCAGGGAGGATACAACTAGTGATTTTGAGAAAGCCAAGGCTCATAAGTCGACATTGGAGGCTGCAATTGCCGAGTTCAACAGGAAACCAATGAAAGGGGTGGAATATCTAATATCAAATAAGTTGGTGGAAAACACACCTGCCTCTGTTGCTCAATTTTTGAAGAGCACCCCCACTTTGGATAAGGCTACAATCGGTGACTATTTAGGTCAACATGAAGAGTTTCCCCTTGCTGTGATGCACTCTTATGTAGATTCCATGAAGTTTTCTGGAATGAAATTTGATACCGCTATCAGGGAGTTCCTTAAAGGATTTCGTCTTCCTGGGGAAGCTCAAAAGATAGATCGAATCATGGAAAAGTTTGCAGAGAGATACTGTGCAGACAACCCAGGCCTCTTTAAAAATGCAGATACAGCATATGTTCTTGCATATGCTGTTATTATGTTGAATACTGATGCTCATAACCCAATGGTGTGGCCTAAGATGTCGAAATCAGATTTTGTTCGGATGAATGCTAAGGATGATCCTGATGAATGCGCGCCTAAAGAACTTCTGGAAGAGATCTATGATTCCATTGTCAAAGAAGAGATTAAAATGAAAGACGACCCATCTTTTATTGGAAAAAGCAGCAGACAAAAGTCAGAAGGTGAAGAAGGACGCCTCGTCAGTATTCTAAACCTGGCACTCCCCAAAAGAAAGTCATCAGAAGAGGCTAAGTCTGAAAGTGAGGCTATCATTAAGAAAACACAAGCTATTTTCAGGAATAAAGAGGTGAAAAGAGGAGTTTTCTACACTGCTCAGCAAATTGAACTTGTAAGGCCCATGGTAGATGCTGTTGGGTGGCCGTTGCTTGCTACTTTCTCTGTAACTATGGAGGAAGGTGATAATAAGCCTCGTGTCATTCTGTTGATGGAGGGCTTTAAGGCTGGAATACATATTACATATGTGCTCGGAATGGATACCATGCGTTATGCATTTTTAACATCTCTGATCAGGTTTAATTTCTTGCATGCCCCCAAGGAAATGCGTAGTAAAAATGTTGAAGCTTTACGGACACTATTGATCCTTTGTGACTCAGACATGAACGCCCTTCTAGACACATGGAATGCAGTTCTGGAATGTATTTCTCGTCTTGAACATATAGCAACAACTCCTGCAATTTATGCCACTGTCATGCAAGGGTCAAATCAAATATCCAGGGATGCTGTTGTTCAATCTCTCAAAGAGTTAGCTGGGAAACCTGCTGAACAAGTGTTCATGAATAGTGTTAAACTACCCAGTGATTCAATTGTAGAATTCTTCACTGCTCTCTGTGGTGTATCCGCTGAAGAGCTAAAGCAAGCTCCAGCTCGTGTTTTCAGCTTGCAAAAGCTTGTTGAAATTAGTTATTACAACATGGCTCGTATACGTATGGTGTGGGCTAGAATCTGGTCTGTTCTAGCTGATCATTTTATATCAGCTGGGAGTCATTATGATGAGAAAATTGCCATTCAAAGTGAATCCAAAAGAAGGCTAATTGTTGATTGCATTGTTCAGATGATAAAATCTAAGGTTGGAAGCATAAAATCTGGATGGCGTAGTGTTTTTATGATCTTTACAGCTGCTGCAGATGATGAATTGGAATCAATTGTTGAGAGTGCATTTGAAAATGTTGAACAGGTCATTTTAGAACACTTTGATCAAGTAGTGGGAGACTGCTTCATGGATTGTGTGAATTGTCTCATCAGGTTTGCCAATAATAAAACTTCACATCGAATTAGTTTGAAGGCCATTGCTCTCCTGCGGATCTGTGAGGACCGTCTTGCGGAGGGTCTTATTCCTGGTGGTGCTTTAATGCCCGTTGATGCTAATTTGGACACAACTTTGGATGTAACTGAGCATTATTGGTTCCCGATGCTGGCCGGTTTATCTGATCTAACATCAGATCAAAGACCAGAGGTCAGAAGTTGTGCACTTGAAGTGTTGTTTGATTTGCTGAATGAAAGAGGTAGCAAGTTCTCTAAATCATTTTGGGAGAGTATTTTCCATCGAGTTTTATTTCCAATTTTCGATCATGTGAGACATGCTGGAAAAGAGGGCTTCGTTTCTAGTGATGATGATTGGTTTCGTGAAACAAGCATACATTCACTTCAGCTGCTGTGCAACCTTTTCAACACATTCTATAAGGAGGTTTGTTTTATGCTGCCACCATTGCTGAGTTTGCTGTTAGATTGTGCCAAAAAGACAGATCAAACGGTGGTCTCAATTTCTCTGGGTGCGCTGGTGCATCTCATCGAAGTTGGTGGTCATCAATTCAGTGACAGTGACTGGGACATGCTACTTAAAAGCATAAGAGATGCATCATACACAACACAACCTCTAGAGTTGCTTAATGCTTTGAGTTTTGAAAATGTGAGAAATCACGGAGGCATTATTAGAGATTCTGAGGCCAATGCAGGTGACAGTGTAACCATAAAGTCTATTGAGTATGAGGCAGTGGGTGACCATCAACATGATTCCAATAGTAATGGGAAATTATCACCGCTTGCATCCTCGAACGCAAATGCTGATGGAGTTGAAGATTCAGCAGTATCACAGACAAATATAGATCAGTCTGAAGGCCTTCCATCTCCATCAGGAAGAACTCCCAAAGCTGCAGATGGGGGAGAGCCTGATGCCAAGCATGAGGAGAGTCCTTTGCTTGTAACTGTCAGGGGAAAGTGCATTACACAATTATTGCTTCTTGGTGCTATTGATGGCATTCAGAAGAAATATTGGACCAAGTTAAAAGCACCTCAGAAGATTGCTATAATGGACATTTTGCTGTCTTTGTTGGAGTTTGCTGCTTCATATAACTCATCTACAAATCTAAGAACTCGCATGCACCAAATTCCTGATGAAAGGCCACCAATAAATCTTCTACGGCAAGAACTAGCCGGTACTGGCGTATATTTGGACATATTACAAAAAGCAACTTATGGGTTTGAAGCAAACAAAGAAAAATCTCCAGAGTCTGATAAACTTCAAGATGCTGGTTCTACAGCAGACAGTGACTCAAGTGTTACTCAACAGTCTGATGCTGAAGAAAAATTTGAAAGGGTAGCTGAGGAGAAACTGGTGTCTTTCTGTGAACAGGCGCTCAGGGAGGCATCTGATCTCCAGTCTAGTACAGGAGAAACAACTAATATGGATATTCATCGTGTCTTGGAGCTGCGTGCTCCTATCATTATTAAGGTGCTTCAAAGCATGTGCTTTATGAACAATAAGATCTTCAGAAGACACTTAAGAGAATTCTATCCCTTGCTAACAAAACTAGTTTGCTGTGACCAGATGGATGTTCGGGGAGCTCTTGGTGATTTATTCCAAGCACAATTGAAAGCTCTTTTACCATAG

Protein sequence

>Msa1219830

MLEKVCKDPQMLVDIFVNYDCDLEAPNLFERMVTTLSKIAQGIQNTDPNSVAASQTATIKGSSLQGLVSVLKSLVDWEQSHRELEKLKNNKQEGVSGEDSFEIRSREDTTSDFEKAKAHKSTLEAAIAEFNRKPMKGVEYLISNKLVENTPASVAQFLKSTPTLDKATIGDYLGQHEEFPLAVMHSYVDSMKFSGMKFDTAIREFLKGFRLPGEAQKIDRIMEKFAERYCADNPGLFKNADTAYVLAYAVIMLNTDAHNPMVWPKMSKSDFVRMNAKDDPDECAPKELLEEIYDSIVKEEIKMKDDPSFIGKSSRQKSEGEEGRLVSILNLALPKRKSSEEAKSESEAIIKKTQAIFRNKEVKRGVFYTAQQIELVRPMVDAVGWPLLATFSVTMEEGDNKPRVILLMEGFKAGIHITYVLGMDTMRYAFLTSLIRFNFLHAPKEMRSKNVEALRTLLILCDSDMNALLDTWNAVLECISRLEHIATTPAIYATVMQGSNQISRDAVVQSLKELAGKPAEQVFMNSVKLPSDSIVEFFTALCGVSAEELKQAPARVFSLQKLVEISYYNMARIRMVWARIWSVLADHFISAGSHYDEKIAIQSESKRRLIVDCIVQMIKSKVGSIKSGWRSVFMIFTAAADDELESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIRFANNKTSHRISLKAIALLRICEDRLAEGLIPGGALMPVDANLDTTLDVTEHYWFPMLAGLSDLTSDQRPEVRSCALEVLFDLLNERGSKFSKSFWESIFHRVLFPIFDHVRHAGKEGFVSSDDDWFRETSIHSLQLLCNLFNTFYKEVCFMLPPLLSLLLDCAKKTDQTVVSISLGALVHLIEVGGHQFSDSDWDMLLKSIRDASYTTQPLELLNALSFENVRNHGGIIRDSEANAGDSVTIKSIEYEAVGDHQHDSNSNGKLSPLASSNANADGVEDSAVSQTNIDQSEGLPSPSGRTPKAADGGEPDAKHEESPLLVTVRGKCITQLLLLGAIDGIQKKYWTKLKAPQKIAIMDILLSLLEFAASYNSSTNLRTRMHQIPDERPPINLLRQELAGTGVYLDILQKATYGFEANKEKSPESDKLQDAGSTADSDSSVTQQSDAEEKFERVAEEKLVSFCEQALREASDLQSSTGETTNMDIHRVLELRAPIIIKVLQSMCFMNNKIFRRHLREFYPLLTKLVCCDQMDVRGALGDLFQAQLKALLP*