Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207400 | XP_024638358.1 | 95.522 | 335 | 12 | 2 | 1 | 332 | 1 | 335 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207400 | sp|Q0E2Z7|RH41_ORYSJ | 56.667 | 60 | 25 | 1 | 137 | 195 | 16 | 75 | 3.38e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0117660 | Msa1207400 | 0.807269 | 5.489072e-50 | -8.615850e-47 |
| Msa0185080 | Msa1207400 | 0.822720 | 2.036734e-53 | -8.615850e-47 |
| Msa0289280 | Msa1207400 | 0.804307 | 2.300462e-49 | -8.615850e-47 |
| Msa1133230 | Msa1207400 | -0.826351 | 2.845191e-54 | -8.615850e-47 |
| Msa1133250 | Msa1207400 | -0.820904 | 5.360460e-53 | -8.615850e-47 |
| Msa1207400 | Msa1410130 | 0.804700 | 1.904924e-49 | -8.615850e-47 |
| Msa0544840 | Msa1207400 | -0.827660 | 1.384064e-54 | -8.615850e-47 |
| Msa0586520 | Msa1207400 | 0.829504 | 4.962240e-55 | -8.615850e-47 |
| Msa0867520 | Msa1207400 | 0.814633 | 1.394825e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207400 | MtrunA17_Chr4g0056261 | 95.522 | 335 | 12 | 2 | 1 | 332 | 1 | 335 | 0.0 | 654 |
| Msa1207400 | MtrunA17_Chr6g0461751 | 65.116 | 43 | 15 | 0 | 150 | 192 | 30 | 72 | 4.97e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207400 | AT3G02065.3 | 72.500 | 40 | 11 | 0 | 153 | 192 | 20 | 59 | 2.16e-13 | 71.2 |
| Msa1207400 | AT3G02065.2 | 72.500 | 40 | 11 | 0 | 153 | 192 | 20 | 59 | 2.16e-13 | 71.2 |
Find 108 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATTTCTTCTCGAAATATT+TGG | 0.139031 | 8_1:-64857401 | Msa1207400:five_prime_UTR |
| TTAGGAAACAAACCAGAATT+TGG | 0.222150 | 8_1:+64855794 | None:intergenic |
| ACTCGTACTCTTCCAAATTC+TGG | 0.248031 | 8_1:-64855806 | Msa1207400:intron |
| TATTTCTTCTCGAAATATTT+GGG | 0.259343 | 8_1:-64857400 | Msa1207400:five_prime_UTR |
| CTTCTTCTTCCGTTTGTTGT+TGG | 0.302989 | 8_1:+64857549 | None:intergenic |
| TCCATTCCAAAGGATCTTCT+TGG | 0.307088 | 8_1:-64852909 | Msa1207400:CDS |
| GGGGATGGCGGCGACGTTTG+AGG | 0.309265 | 8_1:+64857145 | None:intergenic |
| TGAATTGACTGAAGATGTTT+TGG | 0.324637 | 8_1:-64856907 | Msa1207400:intron |
| TGGGAGTGGGAGGCGGTTGG+TGG | 0.330398 | 8_1:+64857175 | None:intergenic |
| ATCTTCTTGGGCTGTATAGA+AGG | 0.337973 | 8_1:-64852896 | Msa1207400:intron |
| GGGATTGCGGTGGGCGGGGA+TGG | 0.343566 | 8_1:+64857130 | None:intergenic |
| ACCAAGGATAGAGCAGAATT+AGG | 0.343720 | 8_1:+64856793 | None:intergenic |
| CATCATCAACGTCATTCTTA+TGG | 0.352027 | 8_1:+64857097 | None:intergenic |
| GCTAAAGATTTCTCCTCATC+TGG | 0.380344 | 8_1:-64855272 | Msa1207400:CDS |
| TTTGAGGGAGGCGGTGGGAG+TGG | 0.384541 | 8_1:+64857161 | None:intergenic |
| AAGATCCTTTGGAATGGAAC+TGG | 0.385265 | 8_1:+64852914 | None:intergenic |
| CCATTCCAAAGGATCTTCTT+GGG | 0.387151 | 8_1:-64852908 | Msa1207400:CDS |
| GAGGCGGTGGGAGTGGGAGG+CGG | 0.387174 | 8_1:+64857168 | None:intergenic |
| ATGCCGCAGCTCATCGAATC+TGG | 0.401686 | 8_1:-64852233 | Msa1207400:CDS |
| AGGGAGGCGGTGGGAGTGGG+AGG | 0.404872 | 8_1:+64857165 | None:intergenic |
| GGGATGGCGGCGACGTTTGA+GGG | 0.409822 | 8_1:+64857146 | None:intergenic |
| CCAGCTTGGCAAAGACTTGT+TGG | 0.411082 | 8_1:-64852272 | Msa1207400:CDS |
| ATTGCGGTGGGCGGGGATGG+CGG | 0.411161 | 8_1:+64857133 | None:intergenic |
| GCGACGTTTGAGGGAGGCGG+TGG | 0.418688 | 8_1:+64857155 | None:intergenic |
| GTGACGGGATTGCGGTGGGC+GGG | 0.418856 | 8_1:+64857125 | None:intergenic |
| TGACGGGATTGCGGTGGGCG+GGG | 0.419783 | 8_1:+64857126 | None:intergenic |
| AGGTGATGAAAGTGCTTCTT+CGG | 0.420157 | 8_1:-64855840 | Msa1207400:CDS |
| CTGTATTTAGTGATGATACC+TGG | 0.422083 | 8_1:-64855226 | Msa1207400:CDS |
| ATTTCTACTTCTGACTCCAT+TGG | 0.422623 | 8_1:+64855640 | None:intergenic |
| TACAGCCCAAGAAGATCCTT+TGG | 0.423801 | 8_1:+64852903 | None:intergenic |
| TTGAGGGAGGCGGTGGGAGT+GGG | 0.424588 | 8_1:+64857162 | None:intergenic |
| ATGATACCTGGGATTATAAT+CGG | 0.433696 | 8_1:-64855214 | Msa1207400:CDS |
| TGTCTTATATGTGGAAGATA+TGG | 0.435755 | 8_1:-64855584 | Msa1207400:CDS |
| CTTCCACATATAAGACAAAC+AGG | 0.437018 | 8_1:+64855590 | None:intergenic |
| ACCTAATTCTGCTCTATCCT+TGG | 0.450521 | 8_1:-64856794 | Msa1207400:CDS |
| TCCGTTTGTTGTTGGCTTAG+CGG | 0.459823 | 8_1:+64857557 | None:intergenic |
| CTAGTCTTTCTACTTATGAA+TGG | 0.461861 | 8_1:-64855169 | Msa1207400:intron |
| AAAATTCACCAAACCAGTCC+TGG | 0.466512 | 8_1:+64857422 | None:intergenic |
| GCCGCTAAGCCAACAACAAA+CGG | 0.470786 | 8_1:-64857558 | Msa1207400:five_prime_UTR |
| GAATTACAAGTGACTATGTA+AGG | 0.475082 | 8_1:-64852132 | Msa1207400:three_prime_UTR |
| ATTCTTATGGTGATTGTGAC+GGG | 0.476696 | 8_1:+64857110 | None:intergenic |
| ACTAAATACAGGAGCTGGTA+AGG | 0.478114 | 8_1:+64855238 | None:intergenic |
| CAAACAGGTTCTCCAGATAC+AGG | 0.480021 | 8_1:+64855605 | None:intergenic |
| GATCAGGAAAGAAGTTGATT+CGG | 0.482037 | 8_1:-64856949 | Msa1207400:intron |
| TTTCTGTTATATGAGATTGA+AGG | 0.488093 | 8_1:+64857344 | None:intergenic |
| CAGGTATCATCACTAAATAC+AGG | 0.488239 | 8_1:+64855227 | None:intergenic |
| TAATTCTGCTCTATCCTTGG+TGG | 0.489209 | 8_1:-64856791 | Msa1207400:CDS |
| ATGGCGGCGACGTTTGAGGG+AGG | 0.494231 | 8_1:+64857149 | None:intergenic |
| TCCGTTCTTCAGAATCTCCA+TGG | 0.498775 | 8_1:-64857308 | Msa1207400:intron |
| AACATCACTGAAAAGTTGAA+TGG | 0.498788 | 8_1:-64857593 | Msa1207400:five_prime_UTR |
| AGTGGGAGGCGGTTGGTGGT+CGG | 0.498998 | 8_1:+64857179 | None:intergenic |
| AGAAATCTTTAGCTTGGTCA+TGG | 0.500660 | 8_1:+64855306 | None:intergenic |
| AGAAATCTTTAGCTTGGTCG+TGG | 0.500716 | 8_1:+64855282 | None:intergenic |
| GTAGTATAGTTCTTTGTGAT+GGG | 0.502101 | 8_1:-64852195 | Msa1207400:CDS |
| CCAACAAGTCTTTGCCAAGC+TGG | 0.507816 | 8_1:+64852272 | None:intergenic |
| TGTAGTATAGTTCTTTGTGA+TGG | 0.508211 | 8_1:-64852196 | Msa1207400:CDS |
| CGGTGGGAGTGGGAGGCGGT+TGG | 0.510956 | 8_1:+64857172 | None:intergenic |
| TTTATAAAATAGATCACAGT+GGG | 0.511076 | 8_1:-64852951 | Msa1207400:intron |
| GATTGTGACGGGATTGCGGT+GGG | 0.523871 | 8_1:+64857121 | None:intergenic |
| CGTGGGAGAAATCTTTAGCT+TGG | 0.525595 | 8_1:+64855300 | None:intergenic |
| ATGAGGAGAAATCTTTAGCT+TGG | 0.526684 | 8_1:+64855276 | None:intergenic |
| GGGATTATAATCGGCACCGC+TGG | 0.532280 | 8_1:-64855205 | Msa1207400:CDS |
| GAACCTGTTTGTCTTATATG+TGG | 0.532901 | 8_1:-64855593 | Msa1207400:CDS |
| GTGGTCGGAAGTGACATTAC+CGG | 0.533662 | 8_1:+64857194 | None:intergenic |
| TCATCACTAAATACAGGAGC+TGG | 0.538390 | 8_1:+64855233 | None:intergenic |
| TGTGACGGGATTGCGGTGGG+CGG | 0.547113 | 8_1:+64857124 | None:intergenic |
| CATTCTTATGGTGATTGTGA+CGG | 0.547242 | 8_1:+64857109 | None:intergenic |
| GCGGCGACGTTTGAGGGAGG+CGG | 0.548017 | 8_1:+64857152 | None:intergenic |
| ATCTTTAGCTTGGTCATGGG+AGG | 0.555553 | 8_1:+64855310 | None:intergenic |
| CAATCTTCAGCTAAGTGCCC+TGG | 0.556896 | 8_1:+64853057 | None:intergenic |
| CCCAAGAAGATCCTTTGGAA+TGG | 0.561347 | 8_1:+64852908 | None:intergenic |
| GCGATTACATTCTAAAGAGA+AGG | 0.562177 | 8_1:-64857053 | Msa1207400:intron |
| TGTATTTAGTGATGATACCT+GGG | 0.563244 | 8_1:-64855225 | Msa1207400:CDS |
| GGAAGTTCTTAAACTCAATG+AGG | 0.564919 | 8_1:-64855419 | Msa1207400:intron |
| TCAGCTTACAACATCGCCAC+CGG | 0.567297 | 8_1:-64857213 | Msa1207400:intron |
| TTGTGCAGATGCCACCAGCT+TGG | 0.572917 | 8_1:-64852286 | Msa1207400:intron |
| ACCATGGAGATTCTGAAGAA+CGG | 0.573583 | 8_1:+64857307 | None:intergenic |
| CGACGTTTGAGGGAGGCGGT+GGG | 0.578455 | 8_1:+64857156 | None:intergenic |
| GAAATCTTTAGCTTGGTCAT+GGG | 0.582371 | 8_1:+64855307 | None:intergenic |
| ATTTCTTCTCGAAATATTTG+GGG | 0.583172 | 8_1:-64857399 | Msa1207400:five_prime_UTR |
| AGTTGGAAATGTCAAAGACC+AGG | 0.588734 | 8_1:-64853075 | Msa1207400:CDS |
| TAAATCCAGTTCCATTCCAA+AGG | 0.593521 | 8_1:-64852919 | Msa1207400:CDS |
| GTAATCGCTGTGCGACATAG+AGG | 0.599063 | 8_1:+64857068 | None:intergenic |
| GAAATCTTTAGCTTGGTCGT+GGG | 0.605403 | 8_1:+64855283 | None:intergenic |
| GGCATCTCTAATTCCAGATG+AGG | 0.608582 | 8_1:+64855259 | None:intergenic |
| GCGGTGCCGATTATAATCCC+AGG | 0.615017 | 8_1:+64855208 | None:intergenic |
| GGTCACAAAGAAGAATCCAA+TGG | 0.615670 | 8_1:-64855656 | Msa1207400:CDS |
| TGGTGATTGTGACGGGATTG+CGG | 0.620650 | 8_1:+64857117 | None:intergenic |
| TAAAATAGATCACAGTGGGA+AGG | 0.622004 | 8_1:-64852947 | Msa1207400:intron |
| AAGTGCTTCTTCGGAATGTG+AGG | 0.623310 | 8_1:-64855831 | Msa1207400:CDS |
| AAACTCGCGAAGGAAGGAGA+GGG | 0.626774 | 8_1:+64857448 | None:intergenic |
| TGATTGTGACGGGATTGCGG+TGG | 0.629657 | 8_1:+64857120 | None:intergenic |
| AGATGATGATGTCTGTAGCA+TGG | 0.632887 | 8_1:-64855461 | Msa1207400:CDS |
| AAAACTCGCGAAGGAAGGAG+AGG | 0.634879 | 8_1:+64857447 | None:intergenic |
| TCGCTGTGCGACATAGAGGA+AGG | 0.635253 | 8_1:+64857072 | None:intergenic |
| ACAAGTCTTTGCCAAGCTGG+TGG | 0.636062 | 8_1:+64852275 | None:intergenic |
| TGGCCAGATTCGATGAGCTG+CGG | 0.659947 | 8_1:+64852230 | None:intergenic |
| TCACTTGTAATTCTGAGACA+TGG | 0.661440 | 8_1:+64852142 | None:intergenic |
| GTTGGAAATGTCAAAGACCA+GGG | 0.671563 | 8_1:-64853074 | Msa1207400:CDS |
| TGGTGAATATATATGCAATG+AGG | 0.676781 | 8_1:-64855564 | Msa1207400:intron |
| GTTTGTTGTTGGCTTAGCGG+CGG | 0.684629 | 8_1:+64857560 | None:intergenic |
| GTCGGAAGTGACATTACCGG+TGG | 0.684711 | 8_1:+64857197 | None:intergenic |
| CTCACTTGCATAATCCACCA+AGG | 0.688644 | 8_1:+64856777 | None:intergenic |
| TATACTACAGTCAATGCATG+TGG | 0.694469 | 8_1:+64852210 | None:intergenic |
| TCTAGTAAAGAGTTGCAGTG+AGG | 0.699103 | 8_1:-64853034 | Msa1207400:intron |
| ATGGAGATTCTGAAGAACGG+AGG | 0.700496 | 8_1:+64857310 | None:intergenic |
| AACTCGCGAAGGAAGGAGAG+GGG | 0.701956 | 8_1:+64857449 | None:intergenic |
| CATCTTCAGTCAATTCAATG+CGG | 0.747177 | 8_1:+64856913 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTTCAGTTATTTT+TGG | - | chr8_1:64853662-64853681 | Msa1207400:intron | 10.0% |
| !!! | ATAATTTTCAATCATATTTA+TGG | - | chr8_1:64853853-64853872 | Msa1207400:intron | 10.0% |
| !! | AAGAAACAAAAAAATTTAAA+AGG | + | chr8_1:64853982-64854001 | None:intergenic | 10.0% |
| !!! | ATATATTTTTGTTATATTGT+TGG | - | chr8_1:64856016-64856035 | Msa1207400:intron | 10.0% |
| !!! | TAACTTTTAAAAATTATGAA+CGG | + | chr8_1:64856151-64856170 | None:intergenic | 10.0% |
| !! | AAAATAAGATAAAATGAATC+AGG | + | chr8_1:64852851-64852870 | None:intergenic | 15.0% |
| !! | ACAAATAAATTAGAGTTTAA+CGG | + | chr8_1:64853125-64853144 | None:intergenic | 15.0% |
| !!! | TCTTCATTCATAATAATTTT+AGG | - | chr8_1:64854386-64854405 | Msa1207400:intron | 15.0% |
| !!! | CTTCATTCATAATAATTTTA+GGG | - | chr8_1:64854387-64854406 | Msa1207400:intron | 15.0% |
| !! | AGACATAGTAATAAATAAAA+CGG | - | chr8_1:64855005-64855024 | Msa1207400:intron | 15.0% |
| !!! | AGATTTTGAAATATACAATA+AGG | - | chr8_1:64855142-64855161 | Msa1207400:intron | 15.0% |
| !!! | TTTTATGATAAATCTACAAA+AGG | - | chr8_1:64855359-64855378 | Msa1207400:intron | 15.0% |
| !! | TTATTTGTATTGAAAATTGA+GGG | + | chr8_1:64855775-64855794 | None:intergenic | 15.0% |
| !! | ATTATTTGTATTGAAAATTG+AGG | + | chr8_1:64855776-64855795 | None:intergenic | 15.0% |
| !!! | TACACTTTTTAAATGATAAA+GGG | + | chr8_1:64855876-64855895 | None:intergenic | 15.0% |
| !!! | TTACACTTTTTAAATGATAA+AGG | + | chr8_1:64855877-64855896 | None:intergenic | 15.0% |
| !!! | TTTTCAGTGATGTTTTTTTT+GGG | + | chr8_1:64852123-64852142 | None:intergenic | 20.0% |
| !!! | TTATTTCTTCTCGAAATATT+TGG | - | chr8_1:64852321-64852340 | Msa1207400:intron | 20.0% |
| !! | TATTTCTTCTCGAAATATTT+GGG | - | chr8_1:64852322-64852341 | Msa1207400:intron | 20.0% |
| !! | ATTACATAACTATGAATTTC+AGG | + | chr8_1:64853058-64853077 | None:intergenic | 20.0% |
| !! | CAAATAAATTAGAGTTTAAC+GGG | + | chr8_1:64853124-64853143 | None:intergenic | 20.0% |
| !!! | GTTATCATATGGAAAATTTT+GGG | - | chr8_1:64853149-64853168 | Msa1207400:intron | 20.0% |
| !! | CAAAAATAAAATCAAATAGG+TGG | + | chr8_1:64853312-64853331 | None:intergenic | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+AGG | + | chr8_1:64853315-64853334 | None:intergenic | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | + | chr8_1:64853397-64853416 | None:intergenic | 20.0% |
| !! | CAAGTTAGTAGTATTAATTA+GGG | + | chr8_1:64853398-64853417 | None:intergenic | 20.0% |
| !! | ACAAGTTAGTAGTATTAATT+AGG | + | chr8_1:64853399-64853418 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | - | chr8_1:64853440-64853459 | Msa1207400:intron | 20.0% |
| !! | AAATGTGAAAAATACAAAGA+GGG | - | chr8_1:64853525-64853544 | Msa1207400:intron | 20.0% |
| !! | ACTAAAAGAATAGAGAATAT+TGG | + | chr8_1:64853604-64853623 | None:intergenic | 20.0% |
| !!! | TTTCAGTTATTTTTGGTTTT+TGG | - | chr8_1:64853669-64853688 | Msa1207400:intron | 20.0% |
| !!! | TTCAGTTATTTTTGGTTTTT+GGG | - | chr8_1:64853670-64853689 | Msa1207400:intron | 20.0% |
| !! | AATCATATTTATGGATACTT+AGG | - | chr8_1:64853862-64853881 | Msa1207400:intron | 20.0% |
| !! | TAGATATATTGCTTCATAAA+TGG | + | chr8_1:64854017-64854036 | None:intergenic | 20.0% |
| !!! | ACTTCTAGACAATTTTTTTA+CGG | + | chr8_1:64854336-64854355 | None:intergenic | 20.0% |
| !! | GACATAGTAATAAATAAAAC+GGG | - | chr8_1:64855006-64855025 | Msa1207400:intron | 20.0% |
| !! | ACATAGTAATAAATAAAACG+GGG | - | chr8_1:64855007-64855026 | Msa1207400:intron | 20.0% |
| !!! | TAATTTTTCCATTATGATGA+TGG | - | chr8_1:64855500-64855519 | Msa1207400:intron | 20.0% |
| !!! | AATTTTTCCATTATGATGAT+GGG | - | chr8_1:64855501-64855520 | Msa1207400:intron | 20.0% |
| !!! | TTTTAAACAATTTCTAACTC+TGG | + | chr8_1:64855638-64855657 | None:intergenic | 20.0% |
| !!! | TAGAAAAAGTTGTTGTTTAA+AGG | + | chr8_1:64855949-64855968 | None:intergenic | 20.0% |
| !! | TCTATAATAAAGATTGTTGT+TGG | - | chr8_1:64855965-64855984 | Msa1207400:intron | 20.0% |
| !! | ATAAACAAAACTGACATTAT+AGG | - | chr8_1:64856228-64856247 | Msa1207400:intron | 20.0% |
| !! | ACTATATATAAACAAAACTG+AGG | - | chr8_1:64856269-64856288 | Msa1207400:intron | 20.0% |
| !!! | GCAATTTTATTAGAATTACA+TGG | - | chr8_1:64856317-64856336 | Msa1207400:intron | 20.0% |
| !! | AAATCATTACCAAAAAAGAA+AGG | + | chr8_1:64856748-64856767 | None:intergenic | 20.0% |
| !!! | TTTTATAAAATAGATCACAG+TGG | - | chr8_1:64856770-64856789 | Msa1207400:intron | 20.0% |
| !! | TTTATAAAATAGATCACAGT+GGG | - | chr8_1:64856771-64856790 | Msa1207400:intron | 20.0% |
| !! | GAATGTGAATGATAAATATA+TGG | - | chr8_1:64857059-64857078 | Msa1207400:CDS | 20.0% |
| !! | ATGATAAATATATGGTATTG+TGG | - | chr8_1:64857067-64857086 | Msa1207400:CDS | 20.0% |
| !!! | GGAAAAAATTATTTTCTCTA+GGG | + | chr8_1:64857136-64857155 | None:intergenic | 20.0% |
| !!! | AGGAAAAAATTATTTTCTCT+AGG | + | chr8_1:64857137-64857156 | None:intergenic | 20.0% |
| !!! | TTGAATTTTATTTTCAACTG+TGG | - | chr8_1:64857226-64857245 | Msa1207400:intron | 20.0% |
| !!! | TGAATTTTATTTTCAACTGT+GGG | - | chr8_1:64857227-64857246 | Msa1207400:intron | 20.0% |
| !!! | CTTTTCAGTGATGTTTTTTT+TGG | + | chr8_1:64852124-64852143 | None:intergenic | 25.0% |
| ! | ATTTCTTCTCGAAATATTTG+GGG | - | chr8_1:64852323-64852342 | Msa1207400:intron | 25.0% |
| ! | TTTCTGTTATATGAGATTGA+AGG | + | chr8_1:64852381-64852400 | None:intergenic | 25.0% |
| ! | TAAGCTGAAGAAAAGAAAAT+AGG | + | chr8_1:64852497-64852516 | None:intergenic | 25.0% |
| !!! | TGGCTTTTTTTTAGCTTTTA+TGG | - | chr8_1:64852723-64852742 | Msa1207400:intron | 25.0% |
| !! | ATGATAAGTTGTTATTGATC+AGG | - | chr8_1:64852757-64852776 | Msa1207400:intron | 25.0% |
| !! | TATTTGTTGACGTTATCATA+TGG | - | chr8_1:64853138-64853157 | Msa1207400:intron | 25.0% |
| !! | CGTTATCATATGGAAAATTT+TGG | - | chr8_1:64853148-64853167 | Msa1207400:intron | 25.0% |
| ! | AAACTATTTGATGGAGAAAA+TGG | - | chr8_1:64853251-64853270 | Msa1207400:intron | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | + | chr8_1:64853350-64853369 | None:intergenic | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | + | chr8_1:64853351-64853370 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | + | chr8_1:64853387-64853406 | None:intergenic | 25.0% |
| ! | GAAATGTGAAAAATACAAAG+AGG | - | chr8_1:64853524-64853543 | Msa1207400:intron | 25.0% |
| ! | AATGTGAAAAATACAAAGAG+GGG | - | chr8_1:64853526-64853545 | Msa1207400:intron | 25.0% |
| ! | TATTATATGCATATGAAGCT+TGG | - | chr8_1:64853576-64853595 | Msa1207400:intron | 25.0% |
| ! | TAATGAGTAGTTTCATATAC+TGG | - | chr8_1:64853724-64853743 | Msa1207400:intron | 25.0% |
| ! | TCATTAAAACTTTCTTAGAC+AGG | + | chr8_1:64853763-64853782 | None:intergenic | 25.0% |
| !! | AAAAAATTTAAAAGGTGCAC+AGG | + | chr8_1:64853974-64853993 | None:intergenic | 25.0% |
| ! | TGAATTTGAATGCTTTCTTA+AGG | - | chr8_1:64854045-64854064 | Msa1207400:intron | 25.0% |
| ! | TTTCTGTGCATTATATTTGT+TGG | - | chr8_1:64854227-64854246 | Msa1207400:intron | 25.0% |
| !! | TGAATATTTAGGACTTAGAA+TGG | + | chr8_1:64854364-64854383 | None:intergenic | 25.0% |
| ! | GAATGAAGAAGTGAATATTT+AGG | + | chr8_1:64854375-64854394 | None:intergenic | 25.0% |
| ! | AAAATTCTATAAGCAGAGAT+TGG | + | chr8_1:64854598-64854617 | None:intergenic | 25.0% |
| ! | TGACAGAGAAATAAAGAAAA+TGG | - | chr8_1:64854645-64854664 | Msa1207400:intron | 25.0% |
| !! | AAATTCTGGTTATATGTTTC+TGG | - | chr8_1:64854698-64854717 | Msa1207400:intron | 25.0% |
| ! | AAAATCTATAGGTGAGTAAT+TGG | - | chr8_1:64855043-64855062 | Msa1207400:intron | 25.0% |
| ! | AAATCTATAGGTGAGTAATT+GGG | - | chr8_1:64855044-64855063 | Msa1207400:intron | 25.0% |
| !! | GTAATACATGTTTTTCCATT+AGG | - | chr8_1:64855196-64855215 | Msa1207400:CDS | 25.0% |
| !! | CTTTTATAGCCTTTATGATT+TGG | - | chr8_1:64855226-64855245 | Msa1207400:CDS | 25.0% |
| !!! | TACAGTTTGTGTTGATTATA+GGG | - | chr8_1:64855281-64855300 | Msa1207400:CDS | 25.0% |
| ! | TGATAAATCTACAAAAGGAA+TGG | - | chr8_1:64855364-64855383 | Msa1207400:intron | 25.0% |
| ! | ATCCTTACCAATGAAATATT+GGG | + | chr8_1:64855429-64855448 | None:intergenic | 25.0% |
| ! | TATCCTTACCAATGAAATAT+TGG | + | chr8_1:64855430-64855449 | None:intergenic | 25.0% |
| ! | ATATATAAACAAAACTGAGG+TGG | - | chr8_1:64856272-64856291 | Msa1207400:intron | 25.0% |
| ! | ATTACATGGTATATTTCAAC+TGG | - | chr8_1:64856331-64856350 | Msa1207400:intron | 25.0% |
| ! | ATTTGAGCACAAAATTTACA+TGG | - | chr8_1:64856452-64856471 | Msa1207400:intron | 25.0% |
| ! | AAAATTTACATGGTAATCAG+TGG | - | chr8_1:64856462-64856481 | Msa1207400:intron | 25.0% |
| !! | ACATATTTTTCACAAATGCA+TGG | + | chr8_1:64856576-64856595 | None:intergenic | 25.0% |
| ! | CATCAATACTATATTTGCAT+AGG | - | chr8_1:64856716-64856735 | Msa1207400:intron | 25.0% |
| !! | AAATTTCTTTTTACTTGCCT+TGG | - | chr8_1:64856854-64856873 | Msa1207400:intron | 25.0% |
| !!! | GAATGTGTTTTTAACCTTTT+AGG | - | chr8_1:64857179-64857198 | Msa1207400:CDS | 25.0% |
| !!! | TTTTAACCTTTTAGGTAGAA+CGG | - | chr8_1:64857187-64857206 | Msa1207400:CDS | 25.0% |
| ! | AATGATTGTACTTCTTAAGT+GGG | - | chr8_1:64857341-64857360 | Msa1207400:CDS | 25.0% |
| AACATCACTGAAAAGTTGAA+TGG | - | chr8_1:64852129-64852148 | Msa1207400:three_prime_UTR | 30.0% | |
| ! | TCCATGCATTATGCAATTTT+TGG | - | chr8_1:64852703-64852722 | Msa1207400:intron | 30.0% |
| ! | TGAATTGACTGAAGATGTTT+TGG | - | chr8_1:64852815-64852834 | Msa1207400:intron | 30.0% |
| AATTGTAACTAGCAAACCTT+TGG | + | chr8_1:64853206-64853225 | None:intergenic | 30.0% | |
| TCCATCAAATAGTTTCTCTT+CGG | + | chr8_1:64853246-64853265 | None:intergenic | 30.0% | |
| CAAATAGGTGGTTACATTAA+GGG | + | chr8_1:64853300-64853319 | None:intergenic | 30.0% | |
| TCAAATAGGTGGTTACATTA+AGG | + | chr8_1:64853301-64853320 | None:intergenic | 30.0% | |
| CATCTAGTAATTTGAAAAGG+GGG | + | chr8_1:64853348-64853367 | None:intergenic | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | + | chr8_1:64853349-64853368 | None:intergenic | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | - | chr8_1:64853449-64853468 | Msa1207400:intron | 30.0% | |
| TTATCCCAGGAAAAACTAAT+AGG | + | chr8_1:64853707-64853726 | None:intergenic | 30.0% | |
| TTAGGAAACAAACCAGAATT+TGG | + | chr8_1:64853931-64853950 | None:intergenic | 30.0% | |
| TGTCTTATATGTGGAAGATA+TGG | - | chr8_1:64854138-64854157 | Msa1207400:intron | 30.0% | |
| TGGTGAATATATATGCAATG+AGG | - | chr8_1:64854158-64854177 | Msa1207400:intron | 30.0% | |
| ! | CACTTCAACTTTTACTTTAC+AGG | - | chr8_1:64854203-64854222 | Msa1207400:intron | 30.0% |
| TGTATTTAGTGATGATACCT+GGG | - | chr8_1:64854497-64854516 | Msa1207400:intron | 30.0% | |
| ATGATACCTGGGATTATAAT+CGG | - | chr8_1:64854508-64854527 | Msa1207400:intron | 30.0% | |
| ! | CTAGTCTTTCTACTTATGAA+TGG | - | chr8_1:64854553-64854572 | Msa1207400:intron | 30.0% |
| TTGAAAGACTTTGATACTTG+AGG | - | chr8_1:64854737-64854756 | Msa1207400:intron | 30.0% | |
| CTTTAACTACTTGACTTACA+TGG | - | chr8_1:64854892-64854911 | Msa1207400:intron | 30.0% | |
| GGAAAAACATGTATTACCAA+AGG | + | chr8_1:64855193-64855212 | None:intergenic | 30.0% | |
| ! | ATGTTTTTCCATTAGGTGAT+AGG | - | chr8_1:64855203-64855222 | Msa1207400:CDS | 30.0% |
| TATAAAAGCCTATCACCTAA+TGG | + | chr8_1:64855214-64855233 | None:intergenic | 30.0% | |
| GATTACTCACCAAATCATAA+AGG | + | chr8_1:64855238-64855257 | None:intergenic | 30.0% | |
| ATCAACACAAACTGTAGTTT+AGG | + | chr8_1:64855277-64855296 | None:intergenic | 30.0% | |
| !! | CTACAGTTTGTGTTGATTAT+AGG | - | chr8_1:64855280-64855299 | Msa1207400:CDS | 30.0% |
| TTTCATTGGTAAGGATACAT+TGG | - | chr8_1:64855433-64855452 | Msa1207400:CDS | 30.0% | |
| TTTATCCCATTTCAACAATC+TGG | - | chr8_1:64855464-64855483 | Msa1207400:CDS | 30.0% | |
| TAAATCCGTTCAGTCATATT+GGG | + | chr8_1:64855590-64855609 | None:intergenic | 30.0% | |
| TTAAATCCGTTCAGTCATAT+TGG | + | chr8_1:64855591-64855610 | None:intergenic | 30.0% | |
| !!! | TTGAAAATTGAGGGCATTTT+TGG | + | chr8_1:64855766-64855785 | None:intergenic | 30.0% |
| TGTCGGAAAAAAAAATCACT+AGG | - | chr8_1:64856365-64856384 | Msa1207400:intron | 30.0% | |
| GTCGGAAAAAAAAATCACTA+GGG | - | chr8_1:64856366-64856385 | Msa1207400:intron | 30.0% | |
| GAAAAAAAAATCACTAGGGA+AGG | - | chr8_1:64856370-64856389 | Msa1207400:intron | 30.0% | |
| ATCAGTGGATATCTAATACT+CGG | - | chr8_1:64856477-64856496 | Msa1207400:intron | 30.0% | |
| ACAAAATAAAAATAGAGCGC+GGG | + | chr8_1:64856893-64856912 | None:intergenic | 30.0% | |
| GACAAAATAAAAATAGAGCG+CGG | + | chr8_1:64856894-64856913 | None:intergenic | 30.0% | |
| GAATGATTGTACTTCTTAAG+TGG | - | chr8_1:64857340-64857359 | Msa1207400:CDS | 30.0% | |
| TGTAGTATAGTTCTTTGTGA+TGG | - | chr8_1:64857526-64857545 | Msa1207400:five_prime_UTR | 30.0% | |
| GTAGTATAGTTCTTTGTGAT+GGG | - | chr8_1:64857527-64857546 | Msa1207400:five_prime_UTR | 30.0% | |
| GAATTACAAGTGACTATGTA+AGG | - | chr8_1:64857590-64857609 | Msa1207400:five_prime_UTR | 30.0% | |
| AAGATAGAGAGAGTTGGAAT+TGG | + | chr8_1:64852467-64852486 | None:intergenic | 35.0% | |
| ATTCTTATGGTGATTGTGAC+GGG | + | chr8_1:64852615-64852634 | None:intergenic | 35.0% | |
| CATTCTTATGGTGATTGTGA+CGG | + | chr8_1:64852616-64852635 | None:intergenic | 35.0% | |
| CATCATCAACGTCATTCTTA+TGG | + | chr8_1:64852628-64852647 | None:intergenic | 35.0% | |
| ! | GCGATTACATTCTAAAGAGA+AGG | - | chr8_1:64852669-64852688 | Msa1207400:intron | 35.0% |
| GCCAAAAATTGCATAATGCA+TGG | + | chr8_1:64852707-64852726 | None:intergenic | 35.0% | |
| ! | GATCAGGAAAGAAGTTGATT+CGG | - | chr8_1:64852773-64852792 | Msa1207400:intron | 35.0% |
| CATCTTCAGTCAATTCAATG+CGG | + | chr8_1:64852812-64852831 | None:intergenic | 35.0% | |
| AACGAATAACAGAAGAGCAA+CGG | + | chr8_1:64852877-64852896 | None:intergenic | 35.0% | |
| !!! | GTTTTGCTTTTTCTGTGACA+GGG | - | chr8_1:64852902-64852921 | Msa1207400:CDS | 35.0% |
| TAGGAGGATATTCAAACCAA+AGG | - | chr8_1:64853187-64853206 | Msa1207400:intron | 35.0% | |
| CCATCAAATAGTTTCTCTTC+GGG | + | chr8_1:64853245-64853264 | None:intergenic | 35.0% | |
| TGAAAAGGGGGTTACATTTA+GGG | + | chr8_1:64853336-64853355 | None:intergenic | 35.0% | |
| TTGAAAAGGGGGTTACATTT+AGG | + | chr8_1:64853337-64853356 | None:intergenic | 35.0% | |
| TACAAAGAGGGGTTACATTA+AGG | - | chr8_1:64853537-64853556 | Msa1207400:intron | 35.0% | |
| ACAAAGAGGGGTTACATTAA+GGG | - | chr8_1:64853538-64853557 | Msa1207400:intron | 35.0% | |
| !!! | ACATGCCTATTAGTTTTTCC+TGG | - | chr8_1:64853699-64853718 | Msa1207400:intron | 35.0% |
| !!! | CATGCCTATTAGTTTTTCCT+GGG | - | chr8_1:64853700-64853719 | Msa1207400:intron | 35.0% |
| ATGAAACTACTCATTATCCC+AGG | + | chr8_1:64853720-64853739 | None:intergenic | 35.0% | |
| ATTTCTACTTCTGACTCCAT+TGG | + | chr8_1:64854085-64854104 | None:intergenic | 35.0% | |
| GAACCTGTTTGTCTTATATG+TGG | - | chr8_1:64854129-64854148 | Msa1207400:intron | 35.0% | |
| CTTCCACATATAAGACAAAC+AGG | + | chr8_1:64854135-64854154 | None:intergenic | 35.0% | |
| GGAATGCAAAAATGAACTTC+TGG | - | chr8_1:64854282-64854301 | Msa1207400:intron | 35.0% | |
| GGAAGTTCTTAAACTCAATG+AGG | - | chr8_1:64854303-64854322 | Msa1207400:intron | 35.0% | |
| !! | GAAATCTTTAGCTTGGTCAT+GGG | + | chr8_1:64854418-64854437 | None:intergenic | 35.0% |
| !! | AGAAATCTTTAGCTTGGTCA+TGG | + | chr8_1:64854419-64854438 | None:intergenic | 35.0% |
| ATGAGGAGAAATCTTTAGCT+TGG | + | chr8_1:64854449-64854468 | None:intergenic | 35.0% | |
| CAGGTATCATCACTAAATAC+AGG | + | chr8_1:64854498-64854517 | None:intergenic | 35.0% | |
| CTGTATTTAGTGATGATACC+TGG | - | chr8_1:64854496-64854515 | Msa1207400:intron | 35.0% | |
| CTGCATACTAACTGAAATTC+TGG | - | chr8_1:64854684-64854703 | Msa1207400:intron | 35.0% | |
| AAACAGTGAGAGTGAGAAAT+AGG | - | chr8_1:64854760-64854779 | Msa1207400:intron | 35.0% | |
| AACAGTGAGAGTGAGAAATA+GGG | - | chr8_1:64854761-64854780 | Msa1207400:intron | 35.0% | |
| TGAAGAACCTTAACCTAATG+AGG | - | chr8_1:64854932-64854951 | Msa1207400:intron | 35.0% | |
| TATGTCTGTCAACATACTTG+AGG | + | chr8_1:64854992-64855011 | None:intergenic | 35.0% | |
| AAATAAAACGGGGATGATGA+AGG | - | chr8_1:64855017-64855036 | Msa1207400:intron | 35.0% | |
| AATAAAACGGGGATGATGAA+GGG | - | chr8_1:64855018-64855037 | Msa1207400:intron | 35.0% | |
| TTTAGGTCTCAATGTGTTTG+TGG | + | chr8_1:64855260-64855279 | None:intergenic | 35.0% | |
| AATCTACAAAAGGAATGGCA+TGG | - | chr8_1:64855369-64855388 | Msa1207400:intron | 35.0% | |
| AGACTTCTGAACAAAATTCG+TGG | - | chr8_1:64855402-64855421 | Msa1207400:intron | 35.0% | |
| GTCCCAATATTTCATTGGTA+AGG | - | chr8_1:64855424-64855443 | Msa1207400:CDS | 35.0% | |
| CATAGCCAGATTGTTGAAAT+GGG | + | chr8_1:64855472-64855491 | None:intergenic | 35.0% | |
| ACATAGCCAGATTGTTGAAA+TGG | + | chr8_1:64855473-64855492 | None:intergenic | 35.0% | |
| !! | TTCCATTATGATGATGGGTA+TGG | - | chr8_1:64855506-64855525 | Msa1207400:intron | 35.0% |
| ATCCATACCCATCATCATAA+TGG | + | chr8_1:64855511-64855530 | None:intergenic | 35.0% | |
| AAATCCGTTCAGTCATATTG+GGG | + | chr8_1:64855589-64855608 | None:intergenic | 35.0% | |
| AGTTAGCGCAATAAAAAGAG+CGG | - | chr8_1:64856166-64856185 | Msa1207400:intron | 35.0% | |
| CAATAAAAAGAGCGGAAAGA+CGG | - | chr8_1:64856174-64856193 | Msa1207400:intron | 35.0% | |
| AATAAAAAGAGCGGAAAGAC+GGG | - | chr8_1:64856175-64856194 | Msa1207400:intron | 35.0% | |
| TAATACTCGGTCCAAGTATA+CGG | - | chr8_1:64856490-64856509 | Msa1207400:intron | 35.0% | |
| AGTGTATATCACCGTATACT+TGG | + | chr8_1:64856504-64856523 | None:intergenic | 35.0% | |
| CTGTAACATTGATGTTTCGA+AGG | - | chr8_1:64856522-64856541 | Msa1207400:intron | 35.0% | |
| AACATTGATGTTTCGAAGGA+TGG | - | chr8_1:64856526-64856545 | Msa1207400:intron | 35.0% | |
| ACCAAAGACCAAATCAGAAA+GGG | + | chr8_1:64856607-64856626 | None:intergenic | 35.0% | |
| AACCAAAGACCAAATCAGAA+AGG | + | chr8_1:64856608-64856627 | None:intergenic | 35.0% | |
| !! | TCTGATTTGGTCTTTGGTTA+TGG | - | chr8_1:64856609-64856628 | Msa1207400:intron | 35.0% |
| !! | CTGATTTGGTCTTTGGTTAT+GGG | - | chr8_1:64856610-64856629 | Msa1207400:intron | 35.0% |
| !!! | GGGTTTTGTTTTACTGTAGT+TGG | - | chr8_1:64856630-64856649 | Msa1207400:intron | 35.0% |
| !!! | AGGAGTTCACCTTTCTTTTT+TGG | - | chr8_1:64856736-64856755 | Msa1207400:intron | 35.0% |
| TAAAATAGATCACAGTGGGA+AGG | - | chr8_1:64856775-64856794 | Msa1207400:intron | 35.0% | |
| TAAATCCAGTTCCATTCCAA+AGG | - | chr8_1:64856803-64856822 | Msa1207400:intron | 35.0% | |
| CAAAATAAAAATAGAGCGCG+GGG | + | chr8_1:64856892-64856911 | None:intergenic | 35.0% | |
| GAGTGATTTAGTACTTGTCT+TGG | + | chr8_1:64856933-64856952 | None:intergenic | 35.0% | |
| TTTAAGCCGTTCTACCTAAA+AGG | + | chr8_1:64857196-64857215 | None:intergenic | 35.0% | |
| ! | CTGAGTTTGCTTCATTTCTA+TGG | + | chr8_1:64857398-64857417 | None:intergenic | 35.0% |
| TATACTACAGTCAATGCATG+TGG | + | chr8_1:64857515-64857534 | None:intergenic | 35.0% | |
| !! | TCACTTGTAATTCTGAGACA+TGG | + | chr8_1:64857583-64857602 | None:intergenic | 35.0% |
| !! | CTTCTTCTTCCGTTTGTTGT+TGG | + | chr8_1:64852176-64852195 | None:intergenic | 40.0% |
| ! | CGACAAGAGTAGTTTTCTTG+TGG | - | chr8_1:64852229-64852248 | Msa1207400:CDS | 40.0% |
| !!! | AGTTTTTTCCAGGACTGGTT+TGG | - | chr8_1:64852292-64852311 | Msa1207400:intron | 40.0% |
| AAAATTCACCAAACCAGTCC+TGG | + | chr8_1:64852303-64852322 | None:intergenic | 40.0% | |
| ! | ACCATGGAGATTCTGAAGAA+CGG | + | chr8_1:64852418-64852437 | None:intergenic | 40.0% |
| GAGATATGGGAAACAAACCA+TGG | + | chr8_1:64852434-64852453 | None:intergenic | 40.0% | |
| TGGAACGAGGAAAGAGATAT+GGG | + | chr8_1:64852447-64852466 | None:intergenic | 40.0% | |
| TTGGAACGAGGAAAGAGATA+TGG | + | chr8_1:64852448-64852467 | None:intergenic | 40.0% | |
| GAGTGAAAGATAGAGAGAGT+TGG | + | chr8_1:64852473-64852492 | None:intergenic | 40.0% | |
| !!! | CGTTTTGCTTTTTCTGTGAC+AGG | - | chr8_1:64852901-64852920 | Msa1207400:CDS | 40.0% |
| ACCTAATTCTGCTCTATCCT+TGG | - | chr8_1:64852928-64852947 | Msa1207400:CDS | 40.0% | |
| ACCAAGGATAGAGCAGAATT+AGG | + | chr8_1:64852932-64852951 | None:intergenic | 40.0% | |
| TAATTCTGCTCTATCCTTGG+TGG | - | chr8_1:64852931-64852950 | Msa1207400:CDS | 40.0% | |
| ! | GTTTAACGGGCATACATTGT+CGG | + | chr8_1:64853111-64853130 | None:intergenic | 40.0% |
| ! | TGGGTTTGATCTGACTAGTT+AGG | - | chr8_1:64853168-64853187 | Msa1207400:intron | 40.0% |
| ! | GTTTGATCTGACTAGTTAGG+AGG | - | chr8_1:64853171-64853190 | Msa1207400:intron | 40.0% |
| CCCGAAGAGAAACTATTTGA+TGG | - | chr8_1:64853242-64853261 | Msa1207400:intron | 40.0% | |
| TAGGTGGTTACATTAAGGGA+CGG | + | chr8_1:64853296-64853315 | None:intergenic | 40.0% | |
| !! | AGGTGATGAAAGTGCTTCTT+CGG | - | chr8_1:64853882-64853901 | Msa1207400:intron | 40.0% |
| ACTCGTACTCTTCCAAATTC+TGG | - | chr8_1:64853916-64853935 | Msa1207400:intron | 40.0% | |
| GAGGTTTAAACTTGCAGGTT+AGG | + | chr8_1:64853949-64853968 | None:intergenic | 40.0% | |
| GGTCACAAAGAAGAATCCAA+TGG | - | chr8_1:64854066-64854085 | Msa1207400:intron | 40.0% | |
| ! | AGATGATGATGTCTGTAGCA+TGG | - | chr8_1:64854261-64854280 | Msa1207400:intron | 40.0% |
| !! | GAAATCTTTAGCTTGGTCGT+GGG | + | chr8_1:64854442-64854461 | None:intergenic | 40.0% |
| !! | AGAAATCTTTAGCTTGGTCG+TGG | + | chr8_1:64854443-64854462 | None:intergenic | 40.0% |
| GCTAAAGATTTCTCCTCATC+TGG | - | chr8_1:64854450-64854469 | Msa1207400:intron | 40.0% | |
| ACTAAATACAGGAGCTGGTA+AGG | + | chr8_1:64854487-64854506 | None:intergenic | 40.0% | |
| TCATCACTAAATACAGGAGC+TGG | + | chr8_1:64854492-64854511 | None:intergenic | 40.0% | |
| !! | TAGATCTCGTTTTTGACCAG+CGG | + | chr8_1:64854536-64854555 | None:intergenic | 40.0% |
| TACGCTATGTCTGTTTGACT+TGG | + | chr8_1:64854958-64854977 | None:intergenic | 40.0% | |
| ATAAAACGGGGATGATGAAG+GGG | - | chr8_1:64855019-64855038 | Msa1207400:intron | 40.0% | |
| GATGAAGGGGGAAAATCTAT+AGG | - | chr8_1:64855032-64855051 | Msa1207400:intron | 40.0% | |
| GGTGAGTAATTGGGAGATTA+AGG | - | chr8_1:64855053-64855072 | Msa1207400:intron | 40.0% | |
| GAGTAATTGGGAGATTAAGG+AGG | - | chr8_1:64855056-64855075 | Msa1207400:intron | 40.0% | |
| ! | GATACCCAAACTCATTGACT+AGG | - | chr8_1:64855164-64855183 | Msa1207400:intron | 40.0% |
| GTGTCCTAGTCAATGAGTTT+GGG | + | chr8_1:64855171-64855190 | None:intergenic | 40.0% | |
| TGATTATAGGGTCTCAAGAG+AGG | - | chr8_1:64855293-64855312 | Msa1207400:CDS | 40.0% | |
| TCGTGGTCCCAATATTTCAT+TGG | - | chr8_1:64855419-64855438 | Msa1207400:intron | 40.0% | |
| !! | ACTAAGTTTCTCACTGGCTT+GGG | + | chr8_1:64855548-64855567 | None:intergenic | 40.0% |
| ! | TACTAAGTTTCTCACTGGCT+TGG | + | chr8_1:64855549-64855568 | None:intergenic | 40.0% |
| GCCAGTGAGAAACTTAGTAA+TGG | - | chr8_1:64855550-64855569 | Msa1207400:intron | 40.0% | |
| GCCATTACTAAGTTTCTCAC+TGG | + | chr8_1:64855554-64855573 | None:intergenic | 40.0% | |
| CATATTGGGGTTGGAAACAT+AGG | + | chr8_1:64855576-64855595 | None:intergenic | 40.0% | |
| AACTGGTTGTGCATCTTTGT+CGG | - | chr8_1:64856348-64856367 | Msa1207400:intron | 40.0% | |
| ATACTTCCCCCTTTCTGATT+TGG | - | chr8_1:64856596-64856615 | Msa1207400:intron | 40.0% | |
| CAAAGACCAAATCAGAAAGG+GGG | + | chr8_1:64856605-64856624 | None:intergenic | 40.0% | |
| CCAAAGACCAAATCAGAAAG+GGG | + | chr8_1:64856606-64856625 | None:intergenic | 40.0% | |
| AGTTGGAAATGTCAAAGACC+AGG | - | chr8_1:64856647-64856666 | Msa1207400:intron | 40.0% | |
| GTTGGAAATGTCAAAGACCA+GGG | - | chr8_1:64856648-64856667 | Msa1207400:intron | 40.0% | |
| TCTAGTAAAGAGTTGCAGTG+AGG | - | chr8_1:64856688-64856707 | Msa1207400:intron | 40.0% | |
| !! | AAGATCCTTTGGAATGGAAC+TGG | + | chr8_1:64856811-64856830 | None:intergenic | 40.0% |
| TCCATTCCAAAGGATCTTCT+TGG | - | chr8_1:64856813-64856832 | Msa1207400:intron | 40.0% | |
| CCATTCCAAAGGATCTTCTT+GGG | - | chr8_1:64856814-64856833 | Msa1207400:intron | 40.0% | |
| ATCTTCTTGGGCTGTATAGA+AGG | - | chr8_1:64856826-64856845 | Msa1207400:intron | 40.0% | |
| AGAAGAAAGACTGGACGAAA+AGG | + | chr8_1:64856990-64857009 | None:intergenic | 40.0% | |
| TTTCGTCCAGTCTTTCTTCT+CGG | - | chr8_1:64856990-64857009 | Msa1207400:intron | 40.0% | |
| TGCTGCATTGTTAGGTTCTA+AGG | - | chr8_1:64857037-64857056 | Msa1207400:intron | 40.0% | |
| ACACATTCCCTTTATGCTCA+AGG | + | chr8_1:64857167-64857186 | None:intergenic | 40.0% | |
| !! | TCCGTTTGTTGTTGGCTTAG+CGG | + | chr8_1:64852168-64852187 | None:intergenic | 45.0% |
| TGGAAAAAACTCGCGAAGGA+AGG | + | chr8_1:64852283-64852302 | None:intergenic | 45.0% | |
| !!! | TTCCTTCGCGAGTTTTTTCC+AGG | - | chr8_1:64852282-64852301 | Msa1207400:intron | 45.0% |
| ! | ATGGAGATTCTGAAGAACGG+AGG | + | chr8_1:64852415-64852434 | None:intergenic | 45.0% |
| TCCGTTCTTCAGAATCTCCA+TGG | - | chr8_1:64852414-64852433 | Msa1207400:intron | 45.0% | |
| AGAGAGTTGGAATTGGAACG+AGG | + | chr8_1:64852460-64852479 | None:intergenic | 45.0% | |
| CTCACTTGCATAATCCACCA+AGG | + | chr8_1:64852948-64852967 | None:intergenic | 45.0% | |
| TGGTTACATTAAGGGACGGA+GGG | + | chr8_1:64853292-64853311 | None:intergenic | 45.0% | |
| AGAGGGGTTACATTAAGGGA+CGG | - | chr8_1:64853542-64853561 | Msa1207400:intron | 45.0% | |
| AAGTGCTTCTTCGGAATGTG+AGG | - | chr8_1:64853891-64853910 | Msa1207400:intron | 45.0% | |
| AGGCAGAGGTTTAAACTTGC+AGG | + | chr8_1:64853954-64853973 | None:intergenic | 45.0% | |
| ! | TTTAAAAGGTGCACAGGCAG+AGG | + | chr8_1:64853968-64853987 | None:intergenic | 45.0% |
| CAAACAGGTTCTCCAGATAC+AGG | + | chr8_1:64854120-64854139 | None:intergenic | 45.0% | |
| !! | ATCTTTAGCTTGGTCATGGG+AGG | + | chr8_1:64854415-64854434 | None:intergenic | 45.0% |
| CGTGGGAGAAATCTTTAGCT+TGG | + | chr8_1:64854425-64854444 | None:intergenic | 45.0% | |
| GGCATCTCTAATTCCAGATG+AGG | + | chr8_1:64854466-64854485 | None:intergenic | 45.0% | |
| ! | AAGCAGAGATTGGTGTTCGA+GGG | + | chr8_1:64854588-64854607 | None:intergenic | 45.0% |
| ! | TAAGCAGAGATTGGTGTTCG+AGG | + | chr8_1:64854589-64854608 | None:intergenic | 45.0% |
| GACTTGGCCTCATTAGGTTA+AGG | + | chr8_1:64854942-64854961 | None:intergenic | 45.0% | |
| !! | CTGTTTGACTTGGCCTCATT+AGG | + | chr8_1:64854948-64854967 | None:intergenic | 45.0% |
| TAAAACGGGGATGATGAAGG+GGG | - | chr8_1:64855020-64855039 | Msa1207400:intron | 45.0% | |
| TGGGAGATTAAGGAGGAAGA+AGG | - | chr8_1:64855063-64855082 | Msa1207400:intron | 45.0% | |
| AGGAAGAAGGAAAAACCCCA+AGG | - | chr8_1:64855076-64855095 | Msa1207400:intron | 45.0% | |
| GGAAGAAGGAAAAACCCCAA+GGG | - | chr8_1:64855077-64855096 | Msa1207400:intron | 45.0% | |
| GAAAAACCCCAAGGGAGAAA+AGG | - | chr8_1:64855085-64855104 | Msa1207400:intron | 45.0% | |
| ! | TTTCCCACCTTTTCTCCCTT+GGG | + | chr8_1:64855095-64855114 | None:intergenic | 45.0% |
| ! | ATTTCCCACCTTTTCTCCCT+TGG | + | chr8_1:64855096-64855115 | None:intergenic | 45.0% |
| GGAGAAAAGGTGGGAAATGA+TGG | - | chr8_1:64855098-64855117 | Msa1207400:intron | 45.0% | |
| GGTGTCCTAGTCAATGAGTT+TGG | + | chr8_1:64855172-64855191 | None:intergenic | 45.0% | |
| ! | CTCATTGACTAGGACACCTT+TGG | - | chr8_1:64855174-64855193 | Msa1207400:CDS | 45.0% |
| CCAACCCCAATATGACTGAA+CGG | - | chr8_1:64855582-64855601 | Msa1207400:CDS | 45.0% | |
| ! | ACTACCCCTTTCAGCTCTTT+TGG | - | chr8_1:64855725-64855744 | Msa1207400:intron | 45.0% |
| ! | CTACCCCTTTCAGCTCTTTT+GGG | - | chr8_1:64855726-64855745 | Msa1207400:intron | 45.0% |
| CAACCCAAAAGAGCTGAAAG+GGG | + | chr8_1:64855732-64855751 | None:intergenic | 45.0% | |
| CCAACCCAAAAGAGCTGAAA+GGG | + | chr8_1:64855733-64855752 | None:intergenic | 45.0% | |
| TCCAACCCAAAAGAGCTGAA+AGG | + | chr8_1:64855734-64855753 | None:intergenic | 45.0% | |
| CATGGCACTAGAACATGTAC+AGG | + | chr8_1:64856558-64856577 | None:intergenic | 45.0% | |
| !! | CCCCTTTCTGATTTGGTCTT+TGG | - | chr8_1:64856603-64856622 | Msa1207400:intron | 45.0% |
| ! | CCCAAGAAGATCCTTTGGAA+TGG | + | chr8_1:64856817-64856836 | None:intergenic | 45.0% |
| TACAGCCCAAGAAGATCCTT+TGG | + | chr8_1:64856822-64856841 | None:intergenic | 45.0% | |
| CATTGACCGAGAAGAAAGAC+TGG | + | chr8_1:64856999-64857018 | None:intergenic | 45.0% | |
| CAGTCTTTCTTCTCGGTCAA+TGG | - | chr8_1:64856997-64857016 | Msa1207400:intron | 45.0% | |
| AGTGTGCATGCTGCATTGTT+AGG | - | chr8_1:64857029-64857048 | Msa1207400:intron | 45.0% | |
| !! | TTTATGCTCAAGGAGCACTC+AGG | + | chr8_1:64857157-64857176 | None:intergenic | 45.0% |
| TGAGTGCTCCTTGAGCATAA+AGG | - | chr8_1:64857156-64857175 | Msa1207400:CDS | 45.0% | |
| GAGTGCTCCTTGAGCATAAA+GGG | - | chr8_1:64857157-64857176 | Msa1207400:CDS | 45.0% | |
| !! | GTTTGTTGTTGGCTTAGCGG+CGG | + | chr8_1:64852165-64852184 | None:intergenic | 50.0% |
| GCCGCTAAGCCAACAACAAA+CGG | - | chr8_1:64852164-64852183 | Msa1207400:three_prime_UTR | 50.0% | |
| AAACTCGCGAAGGAAGGAGA+GGG | + | chr8_1:64852277-64852296 | None:intergenic | 50.0% | |
| AAAACTCGCGAAGGAAGGAG+AGG | + | chr8_1:64852278-64852297 | None:intergenic | 50.0% | |
| GTCCTGGAAAAAACTCGCGA+AGG | + | chr8_1:64852287-64852306 | None:intergenic | 50.0% | |
| !!! | TCGCGAGTTTTTTCCAGGAC+TGG | - | chr8_1:64852287-64852306 | Msa1207400:intron | 50.0% |
| TCAGCTTACAACATCGCCAC+CGG | - | chr8_1:64852509-64852528 | Msa1207400:intron | 50.0% | |
| GTGGTCGGAAGTGACATTAC+CGG | + | chr8_1:64852531-64852550 | None:intergenic | 50.0% | |
| ! | TGGTGATTGTGACGGGATTG+CGG | + | chr8_1:64852608-64852627 | None:intergenic | 50.0% |
| GTAATCGCTGTGCGACATAG+AGG | + | chr8_1:64852657-64852676 | None:intergenic | 50.0% | |
| GTGGTTACATTAAGGGACGG+AGG | + | chr8_1:64853293-64853312 | None:intergenic | 50.0% | |
| GGGTTACATTAAGGGACGGA+GGG | - | chr8_1:64853546-64853565 | Msa1207400:intron | 50.0% | |
| ! | GAGCAGCGTTTTCCTGTATC+TGG | - | chr8_1:64854105-64854124 | Msa1207400:intron | 50.0% |
| AAACCCCAAGGGAGAAAAGG+TGG | - | chr8_1:64855088-64855107 | Msa1207400:intron | 50.0% | |
| AACCCCAAGGGAGAAAAGGT+GGG | - | chr8_1:64855089-64855108 | Msa1207400:intron | 50.0% | |
| ! | TTCCCACCTTTTCTCCCTTG+GGG | + | chr8_1:64855094-64855113 | None:intergenic | 50.0% |
| CCGTTCAGTCATATTGGGGT+TGG | + | chr8_1:64855585-64855604 | None:intergenic | 50.0% | |
| !! | CCCTTTCAGCTCTTTTGGGT+TGG | - | chr8_1:64855730-64855749 | Msa1207400:intron | 50.0% |
| CAATCTTCAGCTAAGTGCCC+TGG | + | chr8_1:64856668-64856687 | None:intergenic | 50.0% | |
| ACAAGTCTTTGCCAAGCTGG+TGG | + | chr8_1:64857450-64857469 | None:intergenic | 50.0% | |
| CCAACAAGTCTTTGCCAAGC+TGG | + | chr8_1:64857453-64857472 | None:intergenic | 50.0% | |
| CCAGCTTGGCAAAGACTTGT+TGG | - | chr8_1:64857450-64857469 | Msa1207400:five_prime_UTR | 50.0% | |
| AACTCGCGAAGGAAGGAGAG+GGG | + | chr8_1:64852276-64852295 | None:intergenic | 55.0% | |
| GTCGGAAGTGACATTACCGG+TGG | + | chr8_1:64852528-64852547 | None:intergenic | 55.0% | |
| ! | GATTGTGACGGGATTGCGGT+GGG | + | chr8_1:64852604-64852623 | None:intergenic | 55.0% |
| ! | TGATTGTGACGGGATTGCGG+TGG | + | chr8_1:64852605-64852624 | None:intergenic | 55.0% |
| TCGCTGTGCGACATAGAGGA+AGG | + | chr8_1:64852653-64852672 | None:intergenic | 55.0% | |
| GGGGTTACATTAAGGGACGG+AGG | - | chr8_1:64853545-64853564 | Msa1207400:intron | 55.0% | |
| !! | GCGGTGCCGATTATAATCCC+AGG | + | chr8_1:64854517-64854536 | None:intergenic | 55.0% |
| GGGATTATAATCGGCACCGC+TGG | - | chr8_1:64854517-64854536 | Msa1207400:intron | 55.0% | |
| CGGGGATCATAGAACTGCCA+AGG | + | chr8_1:64856874-64856893 | None:intergenic | 55.0% | |
| TTGTGCAGATGCCACCAGCT+TGG | - | chr8_1:64857436-64857455 | Msa1207400:five_prime_UTR | 55.0% | |
| ATGCCGCAGCTCATCGAATC+TGG | - | chr8_1:64857489-64857508 | Msa1207400:five_prime_UTR | 55.0% | |
| TGGCCAGATTCGATGAGCTG+CGG | + | chr8_1:64857495-64857514 | None:intergenic | 55.0% | |
| !! | AGTGGGAGGCGGTTGGTGGT+CGG | + | chr8_1:64852546-64852565 | None:intergenic | 65.0% |
| TTGAGGGAGGCGGTGGGAGT+GGG | + | chr8_1:64852563-64852582 | None:intergenic | 65.0% | |
| TTTGAGGGAGGCGGTGGGAG+TGG | + | chr8_1:64852564-64852583 | None:intergenic | 65.0% | |
| CGACGTTTGAGGGAGGCGGT+GGG | + | chr8_1:64852569-64852588 | None:intergenic | 65.0% | |
| ATGGCGGCGACGTTTGAGGG+AGG | + | chr8_1:64852576-64852595 | None:intergenic | 65.0% | |
| ! | GGGATGGCGGCGACGTTTGA+GGG | + | chr8_1:64852579-64852598 | None:intergenic | 65.0% |
| ! | TGTGACGGGATTGCGGTGGG+CGG | + | chr8_1:64852601-64852620 | None:intergenic | 65.0% |
| TGGGAGTGGGAGGCGGTTGG+TGG | + | chr8_1:64852550-64852569 | None:intergenic | 70.0% | |
| GCGACGTTTGAGGGAGGCGG+TGG | + | chr8_1:64852570-64852589 | None:intergenic | 70.0% | |
| GCGGCGACGTTTGAGGGAGG+CGG | + | chr8_1:64852573-64852592 | None:intergenic | 70.0% | |
| ! | GGGGATGGCGGCGACGTTTG+AGG | + | chr8_1:64852580-64852599 | None:intergenic | 70.0% |
| ATTGCGGTGGGCGGGGATGG+CGG | + | chr8_1:64852592-64852611 | None:intergenic | 70.0% | |
| TGACGGGATTGCGGTGGGCG+GGG | + | chr8_1:64852599-64852618 | None:intergenic | 70.0% | |
| ! | GTGACGGGATTGCGGTGGGC+GGG | + | chr8_1:64852600-64852619 | None:intergenic | 70.0% |
| CGGTGGGAGTGGGAGGCGGT+TGG | + | chr8_1:64852553-64852572 | None:intergenic | 75.0% | |
| GAGGCGGTGGGAGTGGGAGG+CGG | + | chr8_1:64852557-64852576 | None:intergenic | 75.0% | |
| AGGGAGGCGGTGGGAGTGGG+AGG | + | chr8_1:64852560-64852579 | None:intergenic | 75.0% | |
| GGGATTGCGGTGGGCGGGGA+TGG | + | chr8_1:64852595-64852614 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 64852113 | 64857631 | 64852113 | ID=Msa1207400;Name=Msa1207400 |
| chr8_1 | mRNA | 64852113 | 64857631 | 64852113 | ID=Msa1207400-mRNA-1;Parent=Msa1207400;Name=Msa1207400-mRNA-1;_AED=0.01;_eAED=0.01;_QI=235|1|1|1|1|1|11|79|332 |
| chr8_1 | exon | 64852113 | 64852300 | 64852113 | ID=Msa1207400-mRNA-1:exon:21285;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64852897 | 64852961 | 64852897 | ID=Msa1207400-mRNA-1:exon:21284;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64853035 | 64853095 | 64853035 | ID=Msa1207400-mRNA-1:exon:21283;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64855170 | 64855336 | 64855170 | ID=Msa1207400-mRNA-1:exon:21282;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64855420 | 64855485 | 64855420 | ID=Msa1207400-mRNA-1:exon:21281;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64855565 | 64855677 | 64855565 | ID=Msa1207400-mRNA-1:exon:21280;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64855807 | 64855860 | 64855807 | ID=Msa1207400-mRNA-1:exon:21279;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64856782 | 64856821 | 64856782 | ID=Msa1207400-mRNA-1:exon:21278;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64856908 | 64856965 | 64856908 | ID=Msa1207400-mRNA-1:exon:21277;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64857054 | 64857231 | 64857054 | ID=Msa1207400-mRNA-1:exon:21276;Parent=Msa1207400-mRNA-1 |
| chr8_1 | exon | 64857309 | 64857631 | 64857309 | ID=Msa1207400-mRNA-1:exon:21275;Parent=Msa1207400-mRNA-1 |
| chr8_1 | five_prime_UTR | 64857397 | 64857631 | 64857397 | ID=Msa1207400-mRNA-1:five_prime_utr;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64857309 | 64857396 | 64857309 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64857054 | 64857231 | 64857054 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64856908 | 64856965 | 64856908 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64856782 | 64856821 | 64856782 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64855807 | 64855860 | 64855807 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64855565 | 64855677 | 64855565 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64855420 | 64855485 | 64855420 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64855170 | 64855336 | 64855170 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64853035 | 64853095 | 64853035 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64852897 | 64852961 | 64852897 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | CDS | 64852192 | 64852300 | 64852192 | ID=Msa1207400-mRNA-1:cds;Parent=Msa1207400-mRNA-1 |
| chr8_1 | three_prime_UTR | 64852113 | 64852191 | 64852113 | ID=Msa1207400-mRNA-1:three_prime_utr;Parent=Msa1207400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
