Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0185080 | XP_013467617.1 | 90.051 | 583 | 20 | 2 | 1 | 581 | 1 | 547 | 0.0 | 1042 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0185080 | sp|A1L0Z4|TBCC1_XENTR | 23.148 | 540 | 312 | 19 | 67 | 574 | 65 | 533 | 1.03e-26 | 118 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0185080 | A0A072VHZ6 | 90.051 | 583 | 20 | 2 | 1 | 581 | 1 | 547 | 0.0 | 1042 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0095360 | Msa0185080 | -0.815979 | 7.001895e-52 | -8.615850e-47 |
Msa0095770 | Msa0185080 | -0.806338 | 8.633539e-50 | -8.615850e-47 |
Msa0117660 | Msa0185080 | 0.984632 | 3.961711e-161 | -8.615850e-47 |
Msa0185080 | Msa0380100 | -0.802857 | 4.597143e-49 | -8.615850e-47 |
Msa0185080 | Msa0542290 | -0.800711 | 1.267650e-48 | -8.615850e-47 |
Msa0185080 | Msa0544840 | -0.809270 | 2.055518e-50 | -8.615850e-47 |
Msa0185080 | Msa0603570 | -0.806943 | 6.435101e-50 | -8.615850e-47 |
Msa0185080 | Msa0642970 | -0.802564 | 5.285053e-49 | -8.615850e-47 |
Msa0185080 | Msa0719180 | -0.821412 | 4.092834e-53 | -8.615850e-47 |
Msa0185080 | Msa0746210 | -0.801686 | 8.009518e-49 | -8.615850e-47 |
Msa0185080 | Msa0867520 | 0.905337 | 4.777043e-80 | -8.615850e-47 |
Msa0185080 | Msa1133230 | -0.809284 | 2.041506e-50 | -8.615850e-47 |
Msa0185080 | Msa1133250 | -0.804235 | 2.381027e-49 | -8.615850e-47 |
Msa0185080 | Msa1207400 | 0.822720 | 2.036734e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0185080 | MtrunA17_Chr1g0174771 | 90.051 | 583 | 20 | 2 | 1 | 581 | 1 | 547 | 0.0 | 1042 |
Msa0185080 | MtrunA17_Chr7g0258351 | 72.077 | 573 | 118 | 5 | 15 | 584 | 22 | 555 | 0.0 | 840 |
Msa0185080 | MtrunA17_Chr6g0462921 | 66.129 | 62 | 21 | 0 | 234 | 295 | 1 | 62 | 2.10e-22 | 93.6 |
Msa0185080 | MtrunA17_Chr7g0248211 | 67.692 | 65 | 15 | 2 | 137 | 196 | 15 | 78 | 1.50e-17 | 77.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0185080 | AT3G57890.1 | 63.356 | 584 | 165 | 6 | 8 | 581 | 23 | 567 | 0.0 | 754 |
Msa0185080 | AT3G57890.2 | 59.677 | 620 | 165 | 7 | 8 | 581 | 23 | 603 | 0.0 | 735 |
Msa0185080 | AT2G42230.2 | 62.045 | 577 | 172 | 5 | 15 | 581 | 23 | 562 | 0.0 | 734 |
Msa0185080 | AT2G42230.1 | 61.663 | 433 | 121 | 4 | 15 | 439 | 23 | 418 | 0.0 | 537 |
Find 191 sgRNAs with CRISPR-Local
Find 761 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATGCTCACCTGCAATTTA+TGG | 0.177659 | 1_4:-75156564 | None:intergenic |
AGGACTTCTGCTAAGGAAAA+TGG | 0.208783 | 1_4:+75153299 | Msa0185080:CDS |
AGGGAGGGAGGGTGGGTTTG+CGG | 0.240986 | 1_4:-75150140 | None:intergenic |
TTAAGATATGCCATTGTCTA+TGG | 0.241107 | 1_4:+75155225 | Msa0185080:CDS |
CGTGGAGGAGGGAGGGAGGG+TGG | 0.242057 | 1_4:-75150148 | None:intergenic |
CCTTCTACTTCTGCGTTTGA+TGG | 0.259375 | 1_4:+75150602 | Msa0185080:CDS |
GCACATACATAAAGATAAAA+TGG | 0.273943 | 1_4:+75158725 | Msa0185080:CDS |
CTCTGCTCTCTCTCCTCTTC+AGG | 0.274169 | 1_4:+75150631 | Msa0185080:CDS |
CACTCATGTGCTCCTCCAAT+TGG | 0.275744 | 1_4:-75157928 | None:intergenic |
TTCTCCTTTCTTTGCAAATT+CGG | 0.277718 | 1_4:+75153184 | Msa0185080:CDS |
CTGCTTCTGTTGCTGATGTT+TGG | 0.283989 | 1_4:+75150579 | Msa0185080:CDS |
GCAAAATATATCTTCTGCTT+TGG | 0.313310 | 1_4:+75153262 | Msa0185080:CDS |
GGGTCGGAGAAGATGAGTTT+TGG | 0.319666 | 1_4:-75150302 | None:intergenic |
ACTCATGTGCTCCTCCAATT+GGG | 0.320118 | 1_4:-75157927 | None:intergenic |
GACTCTCCTGCGAGCCAGTT+TGG | 0.320305 | 1_4:-75158390 | None:intergenic |
TAGACAATGGCATATCTTAA+AGG | 0.325112 | 1_4:-75155222 | None:intergenic |
CAGTCATGAACTTGAGTAAC+AGG | 0.328107 | 1_4:-75153233 | None:intergenic |
CATAAAAGGTTCCTCTGTTA+AGG | 0.328768 | 1_4:+75153457 | Msa0185080:CDS |
AAGCATGCATCTGACATAAA+AGG | 0.335471 | 1_4:+75153443 | Msa0185080:CDS |
TCTAGCCGAGCCAGGGGAGG+AGG | 0.341097 | 1_4:+75152076 | Msa0185080:CDS |
ACAAAATTTGTGAACTGATC+AGG | 0.347132 | 1_4:-75158082 | None:intergenic |
TACTTCAAGGACTGGCTATA+TGG | 0.349727 | 1_4:+75158657 | Msa0185080:CDS |
AGAGAGAAAGAGAGTGAGAT+TGG | 0.350243 | 1_4:-75150185 | None:intergenic |
TATGAATCTGGTAATGCAAA+TGG | 0.361702 | 1_4:-75158435 | None:intergenic |
AGTGAACCAGCAACCTCTTA+TGG | 0.370913 | 1_4:+75156531 | Msa0185080:CDS |
ACGGGAACCGCGGGCATCTC+AGG | 0.374675 | 1_4:-75153209 | None:intergenic |
CCTAGTTCAGTTTGGCGATA+AGG | 0.381659 | 1_4:+75153136 | Msa0185080:CDS |
TCAGATGCTACAATAGTTCT+TGG | 0.382767 | 1_4:+75155252 | Msa0185080:CDS |
GTGATGTGGCTTGAAGTGGT+TGG | 0.387284 | 1_4:-75150090 | None:intergenic |
GGAGATGAGGTGGTTGGAGG+AGG | 0.395910 | 1_4:-75150366 | None:intergenic |
AATGGTGATGAGCGTGGAGG+AGG | 0.396373 | 1_4:-75150160 | None:intergenic |
TGGATAGATTTGAGCACCTT+GGG | 0.396913 | 1_4:+75153111 | Msa0185080:CDS |
TGAGCGTGGAGGAGGGAGGG+AGG | 0.409926 | 1_4:-75150152 | None:intergenic |
CTTGGGTTCCTAGTTCAGTT+TGG | 0.422155 | 1_4:+75153128 | Msa0185080:CDS |
TGATGTGGCTTGAAGTGGTT+GGG | 0.423306 | 1_4:-75150089 | None:intergenic |
TGGTTATCACCAACCATAAG+AGG | 0.423877 | 1_4:-75156544 | None:intergenic |
GAACAGATGGGATGAAGCTC+TGG | 0.425086 | 1_4:+75157973 | Msa0185080:CDS |
ATTACACTTCTATTTACATT+GGG | 0.426307 | 1_4:-75160858 | None:intergenic |
TCTTGATCAGCGGCACTGGC+TGG | 0.439061 | 1_4:-75153323 | None:intergenic |
AGATTTAGTGATCCCTTCAA+TGG | 0.439889 | 1_4:-75153411 | None:intergenic |
GAGCGTGGAGGAGGGAGGGA+GGG | 0.441126 | 1_4:-75150151 | None:intergenic |
AAGGAGGAGTTGAGCGTGTT+CGG | 0.445661 | 1_4:-75150423 | None:intergenic |
CTATCTCTTCTAGCCGAGCC+AGG | 0.445990 | 1_4:+75152068 | Msa0185080:CDS |
AGCCGAGCCAGGGGAGGAGG+GGG | 0.446711 | 1_4:+75152079 | Msa0185080:CDS |
TTTGACTGCAGATTCCAAAC+TGG | 0.447169 | 1_4:+75158376 | Msa0185080:intron |
AGCTGAGTCTGCTACACGCC+TGG | 0.447633 | 1_4:+75158057 | Msa0185080:CDS |
CCTTATCGCCAAACTGAACT+AGG | 0.447758 | 1_4:-75153136 | None:intergenic |
GTGGAGGAGGGAGGGAGGGT+GGG | 0.451363 | 1_4:-75150147 | None:intergenic |
CTTGAAGTGGTTGGGTTGTG+TGG | 0.452634 | 1_4:-75150081 | None:intergenic |
TTCGCGGCGTGGGTGGATCA+TGG | 0.453267 | 1_4:-75150252 | None:intergenic |
ACAATAGTTCTTGGAGCAGT+TGG | 0.453677 | 1_4:+75155261 | Msa0185080:CDS |
TGTGCTTCATGTGTACTTCA+AGG | 0.453994 | 1_4:+75158644 | Msa0185080:CDS |
GTTCGAATGGTTCGCGGCGT+GGG | 0.455676 | 1_4:-75150262 | None:intergenic |
ATGGTGATGAGCGTGGAGGA+GGG | 0.457481 | 1_4:-75150159 | None:intergenic |
CACCAACCATAAGAGGTTGC+TGG | 0.458926 | 1_4:-75156537 | None:intergenic |
GGAGGAGATGAGGTGGTTGG+AGG | 0.459524 | 1_4:-75150369 | None:intergenic |
TGATGAGCGTGGAGGAGGGA+GGG | 0.459805 | 1_4:-75150155 | None:intergenic |
GGACTTCTGCTAAGGAAAAT+GGG | 0.460054 | 1_4:+75153300 | Msa0185080:CDS |
AAGAGAGTGAGATTGGAGAA+TGG | 0.461120 | 1_4:-75150178 | None:intergenic |
GTTGGAGGAGGAAGCGAGGA+GGG | 0.462877 | 1_4:-75150354 | None:intergenic |
GTGATGAGCGTGGAGGAGGG+AGG | 0.463165 | 1_4:-75150156 | None:intergenic |
TGGGACGCCGCATATGAATC+TGG | 0.463411 | 1_4:-75158447 | None:intergenic |
AATTACACTTCTATTTACAT+TGG | 0.470334 | 1_4:-75160859 | None:intergenic |
GGTGGTTGGAGGAGGAAGCG+AGG | 0.470413 | 1_4:-75150358 | None:intergenic |
AGGGATTCATGTTCCATTGA+AGG | 0.471417 | 1_4:+75153398 | Msa0185080:CDS |
TTGTGAACTGATCAGGGTCC+AGG | 0.471481 | 1_4:-75158075 | None:intergenic |
CCATCAAACGCAGAAGTAGA+AGG | 0.472003 | 1_4:-75150602 | None:intergenic |
GAGGAGCACATGAGTGAAGT+TGG | 0.474276 | 1_4:+75157935 | Msa0185080:CDS |
AGGTTCTATTGGTTCTGTCA+TGG | 0.479874 | 1_4:-75150210 | None:intergenic |
TAAAGGTGCTAAGATATAGA+TGG | 0.480989 | 1_4:-75155205 | None:intergenic |
AACATCTTGATCAGCGGCAC+TGG | 0.483194 | 1_4:-75153327 | None:intergenic |
CTCATGTGCTCCTCCAATTG+GGG | 0.484387 | 1_4:-75157926 | None:intergenic |
CTGTTACTCAAGTTCATGAC+TGG | 0.488554 | 1_4:+75153234 | Msa0185080:CDS |
AGCTTATGCGCAGCAATAGT+CGG | 0.490223 | 1_4:+75151973 | Msa0185080:intron |
GAAGAGATAGAATGTTAGCC+AGG | 0.494110 | 1_4:-75152055 | None:intergenic |
ACGGGCCACTTCCCCTCAAA+AGG | 0.494347 | 1_4:+75154115 | Msa0185080:CDS |
GAAAACGATGTCGTAGTTGA+TGG | 0.494632 | 1_4:+75150473 | Msa0185080:CDS |
CCAACACATGTTGGCTCAGT+TGG | 0.495174 | 1_4:+75154086 | Msa0185080:CDS |
TGGCTCAGTTGGTAAGGAAC+GGG | 0.500364 | 1_4:+75154097 | Msa0185080:CDS |
CTAGCCGAGCCAGGGGAGGA+GGG | 0.500416 | 1_4:+75152077 | Msa0185080:CDS |
TGTGATGTGGAAGGTTCTAT+TGG | 0.502246 | 1_4:-75150221 | None:intergenic |
ATTTCTATGATGCAGCTTCA+GGG | 0.502579 | 1_4:+75160444 | Msa0185080:intron |
TGGTGATAACCATAAATTGC+AGG | 0.503356 | 1_4:+75156555 | Msa0185080:CDS |
GGCCGTGTTCGAATGGTTCG+CGG | 0.504045 | 1_4:-75150268 | None:intergenic |
CGGCGTGGGTGGATCATGGT+GGG | 0.507249 | 1_4:-75150248 | None:intergenic |
TTCTGCCCACAGTGAACAGA+TGG | 0.508686 | 1_4:+75157960 | Msa0185080:CDS |
AGATATAGATGGTAGACTCT+TGG | 0.509010 | 1_4:-75155194 | None:intergenic |
GGTTTGTTTGAGTGTGAGAA+GGG | 0.509015 | 1_4:-75150333 | None:intergenic |
GGGTTTGTTTGAGTGTGAGA+AGG | 0.509066 | 1_4:-75150334 | None:intergenic |
TTGGGTTGTGTGGATGATGA+TGG | 0.509951 | 1_4:-75150071 | None:intergenic |
TGTTCGAATGGTTCGCGGCG+TGG | 0.511240 | 1_4:-75150263 | None:intergenic |
CAAACATCAGCAACAGAAGC+AGG | 0.512025 | 1_4:-75150578 | None:intergenic |
CGAATCGGAGATTGTGGCGG+AGG | 0.512705 | 1_4:-75150387 | None:intergenic |
TTCTGAAAGGACTTCTGCTA+AGG | 0.512893 | 1_4:+75153292 | Msa0185080:CDS |
ATCACCACCACAACCTTCCA+CGG | 0.514082 | 1_4:+75150108 | Msa0185080:five_prime_UTR |
CAGATTCCAAACTGGCTCGC+AGG | 0.515530 | 1_4:+75158384 | Msa0185080:intron |
ACATGTTGGCTCAGTTGGTA+AGG | 0.518582 | 1_4:+75154091 | Msa0185080:CDS |
GGCGGAGGAGATGAGGTGGT+TGG | 0.518669 | 1_4:-75150372 | None:intergenic |
CAAAATTTGTGAACTGATCA+GGG | 0.519211 | 1_4:-75158081 | None:intergenic |
GGATCCGAATTTGCAAAGAA+AGG | 0.520206 | 1_4:-75153188 | None:intergenic |
AAAATAATTTAGGAGAGATA+AGG | 0.521940 | 1_4:+75158568 | Msa0185080:CDS |
GAAAACACATTCACGGCAGT+TGG | 0.523649 | 1_4:-75156500 | None:intergenic |
CTTTGGAACATATTTCTGAA+AGG | 0.524901 | 1_4:+75153279 | Msa0185080:CDS |
GAGTGTGAGAAGGGATTGTG+TGG | 0.526300 | 1_4:-75150324 | None:intergenic |
TGAGACGCCGTGGAAGGTTG+TGG | 0.528046 | 1_4:-75150115 | None:intergenic |
GACTGATGCATGCTCTGTCT+CGG | 0.529353 | 1_4:+75153355 | Msa0185080:CDS |
TCATCCCATCTGTTCACTGT+GGG | 0.531454 | 1_4:-75157965 | None:intergenic |
GAGAAGGGATTGTGTGGGGT+CGG | 0.534647 | 1_4:-75150318 | None:intergenic |
TTAAGTTGTCATCAAGTACC+AGG | 0.537403 | 1_4:+75153378 | Msa0185080:CDS |
TAGCCGAGCCAGGGGAGGAG+GGG | 0.538350 | 1_4:+75152078 | Msa0185080:CDS |
ACCTGTGTGACCGATGCAAT+TGG | 0.538591 | 1_4:-75160592 | None:intergenic |
TCCTGTGCAGAGTGATCTAT+CGG | 0.539231 | 1_4:-75160664 | None:intergenic |
ATGGATAGATTTGAGCACCT+TGG | 0.539243 | 1_4:+75153110 | Msa0185080:CDS |
GCAAAAGCACGCACCTGAAG+AGG | 0.539506 | 1_4:-75150644 | None:intergenic |
GGGATTCATGTTCCATTGAA+GGG | 0.539534 | 1_4:+75153399 | Msa0185080:CDS |
ATTTCGCTTGCCAATTGCAT+CGG | 0.540147 | 1_4:+75160582 | Msa0185080:three_prime_UTR |
TTCAATGGAACATGAATCCC+TGG | 0.541433 | 1_4:-75153396 | None:intergenic |
GGGATTAGGCCGTGTTCGAA+TGG | 0.541630 | 1_4:-75150275 | None:intergenic |
GTCTTATCTGCAAAAGCACC+TGG | 0.542117 | 1_4:+75152037 | Msa0185080:CDS |
GCCTCTTCATCAGCCTGCGA+TGG | 0.542685 | 1_4:-75152005 | None:intergenic |
CTGGCTCGCAGGAGAGTCCA+CGG | 0.547439 | 1_4:+75158395 | Msa0185080:CDS |
CGAATGGTTCGCGGCGTGGG+TGG | 0.549598 | 1_4:-75150259 | None:intergenic |
GGTGGTGATGTGGCTTGAAG+TGG | 0.549776 | 1_4:-75150094 | None:intergenic |
GGTTGGAGGAGGAAGCGAGG+AGG | 0.551379 | 1_4:-75150355 | None:intergenic |
GGTTGAGATCTGAAGCGAAT+CGG | 0.556748 | 1_4:-75150402 | None:intergenic |
CTGAAGCGAATCGGAGATTG+TGG | 0.559351 | 1_4:-75150393 | None:intergenic |
GCGGTGTGAGACGCCGTGGA+AGG | 0.559980 | 1_4:-75150121 | None:intergenic |
TTGGCTCAGTTGGTAAGGAA+CGG | 0.563979 | 1_4:+75154096 | Msa0185080:CDS |
TGAACTTGAGTAACAGGGAC+GGG | 0.564622 | 1_4:-75153227 | None:intergenic |
TCCGATAGATCACTCTGCAC+AGG | 0.566854 | 1_4:+75160663 | Msa0185080:three_prime_UTR |
GATTCATTATCTCATCCAGC+TGG | 0.570600 | 1_4:+75158019 | Msa0185080:CDS |
GCCATCGCAGGCTGATGAAG+AGG | 0.572306 | 1_4:+75152004 | Msa0185080:CDS |
CAGTTTGGCGATAAGGCTGA+AGG | 0.573370 | 1_4:+75153143 | Msa0185080:CDS |
ATGAATCTGGTAATGCAAAT+GGG | 0.573775 | 1_4:-75158434 | None:intergenic |
AGATTGTGGCGGAGGAGATG+AGG | 0.574003 | 1_4:-75150379 | None:intergenic |
TATCTCTTCTAGCCGAGCCA+GGG | 0.577420 | 1_4:+75152069 | Msa0185080:CDS |
CGATTCTCGCTGCCGATGTG+AGG | 0.578240 | 1_4:+75154147 | Msa0185080:CDS |
TTGGAGAATGGTGATGAGCG+TGG | 0.578767 | 1_4:-75150166 | None:intergenic |
CGCCGCGAACCATTCGAACA+CGG | 0.579479 | 1_4:+75150266 | Msa0185080:CDS |
TGAACATCAGAGACACCAGC+TGG | 0.580335 | 1_4:-75158034 | None:intergenic |
CTTTATGTATGTGCAAAAGA+CGG | 0.583475 | 1_4:-75158716 | None:intergenic |
TCTCGCTGCCGATGTGAGGA+CGG | 0.586352 | 1_4:+75154151 | Msa0185080:CDS |
GCGGCGTGGGTGGATCATGG+TGG | 0.586738 | 1_4:-75150249 | None:intergenic |
GAGTATAAGACATGAAAGCA+AGG | 0.586918 | 1_4:-75158692 | None:intergenic |
AGTGTGAGAAGGGATTGTGT+GGG | 0.588038 | 1_4:-75150323 | None:intergenic |
TTCATGTGTACTTCAAGGAC+TGG | 0.590213 | 1_4:+75158649 | Msa0185080:CDS |
TCACGGAGGAGAGAGTATCA+AGG | 0.592286 | 1_4:-75150442 | None:intergenic |
GCCAATTGCATCGGTCACAC+AGG | 0.596858 | 1_4:+75160591 | Msa0185080:three_prime_UTR |
TCTTCTAGCCGAGCCAGGGG+AGG | 0.600027 | 1_4:+75152073 | Msa0185080:CDS |
GTAACAGGGACGGGAACCGC+GGG | 0.601270 | 1_4:-75153218 | None:intergenic |
TCAACTTTACTGTCTGCAAG+CGG | 0.601903 | 1_4:+75160475 | Msa0185080:CDS |
TTCATCCCATCTGTTCACTG+TGG | 0.601962 | 1_4:-75157966 | None:intergenic |
AACCAGCAACCTCTTATGGT+TGG | 0.603151 | 1_4:+75156535 | Msa0185080:CDS |
AGTAACAGGGACGGGAACCG+CGG | 0.603705 | 1_4:-75153219 | None:intergenic |
ATCTATCGGATTGCATAAGT+AGG | 0.605601 | 1_4:-75160650 | None:intergenic |
AGCGGATTAATCATCGGCAG+AGG | 0.607369 | 1_4:+75160493 | Msa0185080:CDS |
TGCCGATGTGAGGACGGTGT+TGG | 0.609539 | 1_4:+75154157 | Msa0185080:CDS |
AGTTCTTGGAGCAGTTGGCA+AGG | 0.610594 | 1_4:+75155266 | Msa0185080:CDS |
TGTTCTCTACCAACACATGT+TGG | 0.612400 | 1_4:+75154077 | Msa0185080:CDS |
CATGGTGGGAGCGTGTGATG+TGG | 0.614824 | 1_4:-75150234 | None:intergenic |
GGATGAGATAATGAATCATG+AGG | 0.623920 | 1_4:-75158013 | None:intergenic |
CCAACTGAGCCAACATGTGT+TGG | 0.625098 | 1_4:-75154086 | None:intergenic |
CAAACTGAACTAGGAACCCA+AGG | 0.625171 | 1_4:-75153127 | None:intergenic |
GGAAGGTTGTGGTGGTGATG+TGG | 0.625394 | 1_4:-75150104 | None:intergenic |
TGAAAGAGTTCATGTGATTG+TGG | 0.625475 | 1_4:+75156456 | Msa0185080:CDS |
ATAGATCACTCTGCACAGGA+TGG | 0.625770 | 1_4:+75160667 | Msa0185080:three_prime_UTR |
TGCATTACCAGATTCATATG+CGG | 0.628991 | 1_4:+75158440 | Msa0185080:CDS |
ATCTCTTCTAGCCGAGCCAG+GGG | 0.631243 | 1_4:+75152070 | Msa0185080:CDS |
TCTGCAAGCGGATTAATCAT+CGG | 0.633859 | 1_4:+75160487 | Msa0185080:CDS |
TGGCTCGCAGGAGAGTCCAC+GGG | 0.633963 | 1_4:+75158396 | Msa0185080:CDS |
GTGGGAGCGTGTGATGTGGA+AGG | 0.635216 | 1_4:-75150230 | None:intergenic |
TATCGGATTGCATAAGTAGG+TGG | 0.637089 | 1_4:-75160647 | None:intergenic |
ATCTGAGCATCCATAGACAA+TGG | 0.637689 | 1_4:-75155235 | None:intergenic |
AGTATAAGACATGAAAGCAA+GGG | 0.639068 | 1_4:-75158691 | None:intergenic |
GTTTGCGGTGTGAGACGCCG+TGG | 0.639182 | 1_4:-75150125 | None:intergenic |
TCATGTGCTCCTCCAATTGG+GGG | 0.639194 | 1_4:-75157925 | None:intergenic |
TTGTGGCGGAGGAGATGAGG+TGG | 0.642507 | 1_4:-75150376 | None:intergenic |
TCTGCCCACAGTGAACAGAT+GGG | 0.648990 | 1_4:+75157961 | Msa0185080:CDS |
CACCAACACCGTCCTCACAT+CGG | 0.654181 | 1_4:-75154159 | None:intergenic |
GACGCCGTGGAAGGTTGTGG+TGG | 0.654595 | 1_4:-75150112 | None:intergenic |
TTGGAAACAAACCTTAACAG+AGG | 0.661782 | 1_4:-75153468 | None:intergenic |
TAAGTTGTCATCAAGTACCA+GGG | 0.662209 | 1_4:+75153379 | Msa0185080:CDS |
ATGAACTTGAGTAACAGGGA+CGG | 0.665587 | 1_4:-75153228 | None:intergenic |
CATAGCAACATCTTGATCAG+CGG | 0.675580 | 1_4:-75153333 | None:intergenic |
AAGCGAATCGGAGATTGTGG+CGG | 0.676999 | 1_4:-75150390 | None:intergenic |
GCAGGATCTTTATTCGAACG+TGG | 0.681765 | 1_4:-75150560 | None:intergenic |
GTGTGAGAAGGGATTGTGTG+GGG | 0.683314 | 1_4:-75150322 | None:intergenic |
CGGAGGAGAGAGTATCAAGG+AGG | 0.705309 | 1_4:-75150439 | None:intergenic |
TTCGGATCCTGAGATGCCCG+CGG | 0.705467 | 1_4:+75153202 | Msa0185080:CDS |
AGTCATGAACTTGAGTAACA+GGG | 0.713975 | 1_4:-75153232 | None:intergenic |
GAGAATGGTGATGAGCGTGG+AGG | 0.748413 | 1_4:-75150163 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATATATTCCATTTTATA+GGG | - | chr1_4:75152194-75152213 | None:intergenic | 10.0% |
!!! | AAATATATATTCCATTTTAT+AGG | - | chr1_4:75152195-75152214 | None:intergenic | 10.0% |
!!! | ACTTTTATTTTAATTTGTTA+AGG | + | chr1_4:75152530-75152549 | Msa0185080:intron | 10.0% |
!! | GATTCATTATATATATATAT+AGG | + | chr1_4:75154712-75154731 | Msa0185080:intron | 10.0% |
!! | TTCATTATATATATATATAG+GGG | + | chr1_4:75154714-75154733 | Msa0185080:intron | 10.0% |
!! | AATTTAACAATTGTATTTAT+GGG | + | chr1_4:75156116-75156135 | Msa0185080:intron | 10.0% |
!! | AAAAAAATAATTTGAAAATG+AGG | - | chr1_4:75156229-75156248 | None:intergenic | 10.0% |
!! | TTAAAAAAATTATTCAATGT+GGG | - | chr1_4:75156817-75156836 | None:intergenic | 10.0% |
!! | ATTAAAAAAATTATTCAATG+TGG | - | chr1_4:75156818-75156837 | None:intergenic | 10.0% |
!!! | TTATTTTACAAAATTAAAGA+TGG | - | chr1_4:75160128-75160147 | None:intergenic | 10.0% |
!!! | ATTTTCTTTAATTACTATCA+AGG | + | chr1_4:75150835-75150854 | Msa0185080:intron | 15.0% |
!!! | ATTTTAATTTGTTAAGGATA+AGG | + | chr1_4:75152536-75152555 | Msa0185080:intron | 15.0% |
!!! | ATTATTGGTAATTACAATTA+AGG | + | chr1_4:75152719-75152738 | Msa0185080:intron | 15.0% |
!! | TAATTACAATTAAGGATATT+TGG | + | chr1_4:75152727-75152746 | Msa0185080:intron | 15.0% |
!!! | ATAACTTTATTTCCTTTATA+AGG | - | chr1_4:75153736-75153755 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAGAAGATATC+TGG | - | chr1_4:75154020-75154039 | None:intergenic | 15.0% |
!!! | TTTTTTGTTACAAAAAGTTT+AGG | - | chr1_4:75154260-75154279 | None:intergenic | 15.0% |
!! | TCAATTTAACAAACAATTAT+AGG | - | chr1_4:75154348-75154367 | None:intergenic | 15.0% |
!!! | TTTATGTTTTACCAATTTTA+TGG | - | chr1_4:75154689-75154708 | None:intergenic | 15.0% |
!! | TTTATGAATTGTAATAGATA+GGG | - | chr1_4:75155683-75155702 | None:intergenic | 15.0% |
!!! | TTTTATGAATTGTAATAGAT+AGG | - | chr1_4:75155684-75155703 | None:intergenic | 15.0% |
!! | CAATTTAACAATTGTATTTA+TGG | + | chr1_4:75156115-75156134 | Msa0185080:intron | 15.0% |
!! | GACTAAATTAAAAAATAGAA+TGG | - | chr1_4:75156191-75156210 | None:intergenic | 15.0% |
!! | TAAAAAAATTATTCAATGTG+GGG | - | chr1_4:75156816-75156835 | None:intergenic | 15.0% |
!! | TTCAAATAATAAGTTCAAAA+AGG | - | chr1_4:75157857-75157876 | None:intergenic | 15.0% |
!!! | TAAACATACATTTTTATGTT+GGG | - | chr1_4:75158469-75158488 | None:intergenic | 15.0% |
!! | GTATTCATAAAAAATTAAAG+AGG | - | chr1_4:75158975-75158994 | None:intergenic | 15.0% |
!! | ATTTCAGTTAAGTTAAAATT+GGG | - | chr1_4:75159427-75159446 | None:intergenic | 15.0% |
!! | AATTTCAGTTAAGTTAAAAT+TGG | - | chr1_4:75159428-75159447 | None:intergenic | 15.0% |
!! | AATCCAAAAAATGTATAATA+GGG | - | chr1_4:75159487-75159506 | None:intergenic | 15.0% |
!! | AAATCCAAAAAATGTATAAT+AGG | - | chr1_4:75159488-75159507 | None:intergenic | 15.0% |
!!! | TGACAATATTCTTTTTTAAA+AGG | - | chr1_4:75160776-75160795 | None:intergenic | 15.0% |
!!! | TAAGCAAAAAACAACTTTTT+AGG | + | chr1_4:75151356-75151375 | Msa0185080:intron | 20.0% |
!! | AACTAATGTATATGAATAGA+TGG | - | chr1_4:75151730-75151749 | None:intergenic | 20.0% |
!!! | ATGTTTTTGTAATTTTACCA+TGG | + | chr1_4:75152149-75152168 | Msa0185080:intron | 20.0% |
!!! | GCTTTTATTTTAATATGATC+AGG | + | chr1_4:75152619-75152638 | Msa0185080:intron | 20.0% |
!!! | TTTTAATATGATCAGGAATT+AGG | + | chr1_4:75152626-75152645 | Msa0185080:intron | 20.0% |
!! | TTTGACAATGCATATATTAT+TGG | + | chr1_4:75152704-75152723 | Msa0185080:intron | 20.0% |
!! | GTGTTAAAATATGTTAAGTA+AGG | + | chr1_4:75152910-75152929 | Msa0185080:intron | 20.0% |
!!! | TCTAAAATAAGAAAATCAAG+AGG | - | chr1_4:75152996-75153015 | None:intergenic | 20.0% |
!! | TCTAAAAATATAACACTAGT+AGG | - | chr1_4:75153043-75153062 | None:intergenic | 20.0% |
!! | CCAATTGTATAATTATGATT+CGG | - | chr1_4:75153640-75153659 | None:intergenic | 20.0% |
!! | TAGTAAATCTATCCTTATAA+AGG | + | chr1_4:75153721-75153740 | Msa0185080:intron | 20.0% |
!! | ATCAATTCAATTGAATTTGA+AGG | + | chr1_4:75154534-75154553 | Msa0185080:intron | 20.0% |
!! | ATCAATTCAATTGAATTTGA+AGG | + | chr1_4:75154534-75154553 | Msa0185080:intron | 20.0% |
!!! | TTTTACCAATTTTATGGTTT+TGG | - | chr1_4:75154683-75154702 | None:intergenic | 20.0% |
!! | ACAATTATCATATAGATTCA+TGG | - | chr1_4:75155439-75155458 | None:intergenic | 20.0% |
!! | CAGATTATTAAAATTCTAGT+AGG | + | chr1_4:75155484-75155503 | Msa0185080:intron | 20.0% |
!! | CAAATCAATAGTAATTATGA+TGG | + | chr1_4:75155546-75155565 | Msa0185080:intron | 20.0% |
!!! | AAGAGAATTTTTAATCGAAA+AGG | - | chr1_4:75155859-75155878 | None:intergenic | 20.0% |
!! | CTAAAATCATGTTAAGATAT+TGG | - | chr1_4:75155927-75155946 | None:intergenic | 20.0% |
!! | TACAATTGTTAAATTGTAAC+AGG | - | chr1_4:75156111-75156130 | None:intergenic | 20.0% |
!! | AAATAATTTGAAAATGAGGA+TGG | - | chr1_4:75156225-75156244 | None:intergenic | 20.0% |
!! | CTGTTTATAACATTCAAATT+AGG | + | chr1_4:75156296-75156315 | Msa0185080:intron | 20.0% |
!! | AACTACCATTGATATTTAAA+GGG | - | chr1_4:75156941-75156960 | None:intergenic | 20.0% |
!! | AAACTACCATTGATATTTAA+AGG | - | chr1_4:75156942-75156961 | None:intergenic | 20.0% |
!!! | ATAAAATAGTTTTCTGCATT+CGG | + | chr1_4:75157004-75157023 | Msa0185080:intron | 20.0% |
!!! | ATACAATCTTATTGTAGTTT+TGG | + | chr1_4:75157354-75157373 | Msa0185080:intron | 20.0% |
!!! | TACAATCTTATTGTAGTTTT+GGG | + | chr1_4:75157355-75157374 | Msa0185080:intron | 20.0% |
!! | TAAAGATTATAACTTACGAT+GGG | - | chr1_4:75157565-75157584 | None:intergenic | 20.0% |
!! | ATAAAGATTATAACTTACGA+TGG | - | chr1_4:75157566-75157585 | None:intergenic | 20.0% |
!! | ATAAGAAAGGGAAATATAAA+AGG | + | chr1_4:75157640-75157659 | Msa0185080:intron | 20.0% |
!! | TAAGAAAGGGAAATATAAAA+GGG | + | chr1_4:75157641-75157660 | Msa0185080:intron | 20.0% |
!! | TGAAATACAATAACATTACA+AGG | - | chr1_4:75157684-75157703 | None:intergenic | 20.0% |
!!! | ATTTTCTCTTGTAACTTATT+AGG | + | chr1_4:75157880-75157899 | Msa0185080:intron | 20.0% |
!!! | GTAAACATACATTTTTATGT+TGG | - | chr1_4:75158470-75158489 | None:intergenic | 20.0% |
!! | CATAAAAATGTATGTTTACT+AGG | + | chr1_4:75158471-75158490 | Msa0185080:intron | 20.0% |
!!! | AATTTTATGTATGATTCAAC+TGG | + | chr1_4:75158512-75158531 | Msa0185080:intron | 20.0% |
!!! | TCTTTTCAGCAAAATAATTT+AGG | + | chr1_4:75158558-75158577 | Msa0185080:intron | 20.0% |
!! | AAAATAATTTAGGAGAGATA+AGG | + | chr1_4:75158568-75158587 | Msa0185080:CDS | 20.0% |
!!! | ATAAATTTTTTAGGGTTTGA+GGG | + | chr1_4:75158896-75158915 | Msa0185080:intron | 20.0% |
!! | ACTTTACTCAAACATATATA+AGG | + | chr1_4:75158936-75158955 | Msa0185080:intron | 20.0% |
!! | CGATTACATAACAATAAAAA+TGG | - | chr1_4:75159334-75159353 | None:intergenic | 20.0% |
!! | TTTCAGTTAAGTTAAAATTG+GGG | - | chr1_4:75159426-75159445 | None:intergenic | 20.0% |
!!! | AAATGGTGGTTTTAAAAATA+GGG | - | chr1_4:75159458-75159477 | None:intergenic | 20.0% |
!!! | AAAATGGTGGTTTTAAAAAT+AGG | - | chr1_4:75159459-75159478 | None:intergenic | 20.0% |
!!! | TATTTTTAAAACCACCATTT+TGG | + | chr1_4:75159458-75159477 | Msa0185080:intron | 20.0% |
!! | ATCCAAAAAATGTATAATAG+GGG | - | chr1_4:75159486-75159505 | None:intergenic | 20.0% |
!!! | TTTGGTCTTTTATTTCAATT+TGG | + | chr1_4:75159769-75159788 | Msa0185080:intron | 20.0% |
!!! | TTGGTCTTTTATTTCAATTT+GGG | + | chr1_4:75159770-75159789 | Msa0185080:intron | 20.0% |
! | CAAAGATTGAAATGAGAATT+TGG | - | chr1_4:75150669-75150688 | None:intergenic | 25.0% |
! | TTCAATGTAATCACATATGT+CGG | - | chr1_4:75150794-75150813 | None:intergenic | 25.0% |
! | TTCATAGGTAGTTAACTATA+AGG | + | chr1_4:75150874-75150893 | Msa0185080:intron | 25.0% |
!!! | AATTAGTAGTAGTTTTGCAT+TGG | - | chr1_4:75151010-75151029 | None:intergenic | 25.0% |
!!! | AAAAAGTAGTAGTTTTGCAT+TGG | - | chr1_4:75151040-75151059 | None:intergenic | 25.0% |
! | TTAAATATATCACGATCCAA+AGG | - | chr1_4:75151104-75151123 | None:intergenic | 25.0% |
!!! | TTTTGTTTCATCAGACTATT+TGG | + | chr1_4:75151159-75151178 | Msa0185080:intron | 25.0% |
!! | TTTTTGCTTATAAATGTGAC+CGG | - | chr1_4:75151454-75151473 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAAATGTGAC+CGG | + | chr1_4:75151454-75151473 | Msa0185080:intron | 25.0% |
! | TTAAATCGTTTATCCAAACA+AGG | + | chr1_4:75151501-75151520 | Msa0185080:intron | 25.0% |
! | CTTCATATGGAAACATAAAT+AGG | - | chr1_4:75151527-75151546 | None:intergenic | 25.0% |
! | ATTTGAGAAGTAAATGTGAT+AGG | + | chr1_4:75151665-75151684 | Msa0185080:intron | 25.0% |
! | TTTGAGAAGTAAATGTGATA+GGG | + | chr1_4:75151666-75151685 | Msa0185080:intron | 25.0% |
! | ACTTCTAGTCTAATTATACT+TGG | + | chr1_4:75151822-75151841 | Msa0185080:intron | 25.0% |
! | ATTTCCAAACAAAGAGAAAT+AGG | - | chr1_4:75152593-75152612 | None:intergenic | 25.0% |
!! | ACATTTTACACCTTTCATTT+TGG | + | chr1_4:75152806-75152825 | Msa0185080:intron | 25.0% |
! | TATGCATTTCAATTGACTAA+AGG | - | chr1_4:75152876-75152895 | None:intergenic | 25.0% |
! | TAGGTCTAAGAACTAAAAAA+AGG | - | chr1_4:75153024-75153043 | None:intergenic | 25.0% |
!!! | GTTATCTTAGGTTTTAACTA+TGG | + | chr1_4:75153091-75153110 | Msa0185080:intron | 25.0% |
! | ACATAACAAAAGAAGACATT+TGG | - | chr1_4:75153490-75153509 | None:intergenic | 25.0% |
! | CCGAATCATAATTATACAAT+TGG | + | chr1_4:75153637-75153656 | Msa0185080:intron | 25.0% |
! | TATAAGGATAGATTTACTAC+CGG | - | chr1_4:75153720-75153739 | None:intergenic | 25.0% |
! | TTTGTTACAAAAAGTTTAGG+TGG | - | chr1_4:75154257-75154276 | None:intergenic | 25.0% |
!! | TACATATTTGCCTTTTTGTA+TGG | + | chr1_4:75154298-75154317 | Msa0185080:intron | 25.0% |
! | TCTTTCCAAAACCATAAAAT+TGG | + | chr1_4:75154675-75154694 | Msa0185080:intron | 25.0% |
!!! | GTTTTTTTGTCCAAATGAAA+AGG | - | chr1_4:75154793-75154812 | None:intergenic | 25.0% |
! | ATACAAACAAGGATATTGTT+GGG | + | chr1_4:75154836-75154855 | Msa0185080:intron | 25.0% |
! | TTCAGATGAAAATAAAGAGA+TGG | + | chr1_4:75154882-75154901 | Msa0185080:intron | 25.0% |
! | CATTAAAAGCAGAAAACATA+TGG | - | chr1_4:75155298-75155317 | None:intergenic | 25.0% |
! | ATAATGTATTCGAACATCAA+TGG | + | chr1_4:75155324-75155343 | Msa0185080:intron | 25.0% |
!!! | AAAATCTCGTTCATTTTAAC+TGG | - | chr1_4:75155462-75155481 | None:intergenic | 25.0% |
! | TTAAAATTCTAGTAGGAAAG+AGG | + | chr1_4:75155491-75155510 | Msa0185080:intron | 25.0% |
!!! | ATTACTATTGATTTGTGTTG+TGG | - | chr1_4:75155541-75155560 | None:intergenic | 25.0% |
! | TGCAGTATTTATATTACTGA+TGG | + | chr1_4:75156264-75156283 | Msa0185080:intron | 25.0% |
! | TTCAAATTAGGATATTGAGT+TGG | + | chr1_4:75156308-75156327 | Msa0185080:intron | 25.0% |
!!! | CACATTTTTTTTTTGTTGAC+AGG | + | chr1_4:75156414-75156433 | Msa0185080:intron | 25.0% |
! | CTAAAAAGAAAACACATTCA+CGG | - | chr1_4:75156510-75156529 | None:intergenic | 25.0% |
! | ACTACCATTGATATTTAAAG+GGG | - | chr1_4:75156940-75156959 | None:intergenic | 25.0% |
!! | TAAAATAGTTTTCTGCATTC+GGG | + | chr1_4:75157005-75157024 | Msa0185080:intron | 25.0% |
!!! | TTTTAACTAACTCGTTTTCA+AGG | - | chr1_4:75157299-75157318 | None:intergenic | 25.0% |
! | AAAACGAGTTAGTTAAAATC+AGG | + | chr1_4:75157301-75157320 | Msa0185080:intron | 25.0% |
!!! | AATCCTATTAACTTGTGATA+AGG | + | chr1_4:75157800-75157819 | Msa0185080:intron | 25.0% |
!!! | ATCCTATTAACTTGTGATAA+GGG | + | chr1_4:75157801-75157820 | Msa0185080:intron | 25.0% |
!!! | GTCTAAAAGTTAGTTGATTT+TGG | + | chr1_4:75158166-75158185 | Msa0185080:intron | 25.0% |
! | GCAGTCAAAAATAATAGAAA+AGG | - | chr1_4:75158365-75158384 | None:intergenic | 25.0% |
! | GCACATACATAAAGATAAAA+TGG | + | chr1_4:75158725-75158744 | Msa0185080:CDS | 25.0% |
! | TGAATACATTTATACACAGA+GGG | - | chr1_4:75158786-75158805 | None:intergenic | 25.0% |
! | TTGAATACATTTATACACAG+AGG | - | chr1_4:75158787-75158806 | None:intergenic | 25.0% |
!!! | TGGAGATGGATAAATTTTTT+AGG | + | chr1_4:75158887-75158906 | Msa0185080:intron | 25.0% |
!!! | GGAGATGGATAAATTTTTTA+GGG | + | chr1_4:75158888-75158907 | Msa0185080:intron | 25.0% |
!!! | GATAAATTTTTTAGGGTTTG+AGG | + | chr1_4:75158895-75158914 | Msa0185080:intron | 25.0% |
! | TTATGAATACCCTTGAAATT+TGG | + | chr1_4:75158985-75159004 | Msa0185080:intron | 25.0% |
! | TAATACAATGGTCAATAATG+CGG | - | chr1_4:75159230-75159249 | None:intergenic | 25.0% |
! | AAACTCAACAGATAATACAA+TGG | - | chr1_4:75159242-75159261 | None:intergenic | 25.0% |
! | AGTCAATATTACTGTCAAAT+GGG | + | chr1_4:75159270-75159289 | Msa0185080:intron | 25.0% |
!!! | AATGGTGGTTTTAAAAATAG+GGG | - | chr1_4:75159457-75159476 | None:intergenic | 25.0% |
! | TCCAAAAAATGTATAATAGG+GGG | - | chr1_4:75159485-75159504 | None:intergenic | 25.0% |
! | ACAAATCATCAAAATTGATG+GGG | - | chr1_4:75159515-75159534 | None:intergenic | 25.0% |
! | GACAAATCATCAAAATTGAT+GGG | - | chr1_4:75159516-75159535 | None:intergenic | 25.0% |
! | TGACAAATCATCAAAATTGA+TGG | - | chr1_4:75159517-75159536 | None:intergenic | 25.0% |
! | TGTCATTCTTATTAATGACA+TGG | + | chr1_4:75159532-75159551 | Msa0185080:intron | 25.0% |
! | AGGAAATTATTGTGAAGTAT+AGG | + | chr1_4:75159704-75159723 | Msa0185080:intron | 25.0% |
! | GGAAATTATTGTGAAGTATA+GGG | + | chr1_4:75159705-75159724 | Msa0185080:intron | 25.0% |
! | TTATAACATAGCTTAAGCAT+TGG | - | chr1_4:75159797-75159816 | None:intergenic | 25.0% |
!! | TGTTGAAATAGAACAGTTTT+AGG | + | chr1_4:75159917-75159936 | Msa0185080:intron | 25.0% |
! | ATTATGTATTCAAGAGGAAA+TGG | - | chr1_4:75159985-75160004 | None:intergenic | 25.0% |
TTTAATTACTATCAAGGTCG+TGG | + | chr1_4:75150841-75150860 | Msa0185080:intron | 30.0% | |
AAAATGCTAAAGAGTAGCAT+CGG | + | chr1_4:75150897-75150916 | Msa0185080:intron | 30.0% | |
AGAAACATTGTGTTGAATAG+TGG | + | chr1_4:75150936-75150955 | Msa0185080:intron | 30.0% | |
TTTCCGAACTTTAATTATCC+AGG | + | chr1_4:75151061-75151080 | Msa0185080:intron | 30.0% | |
ACTCCTGGATAATTAAAGTT+CGG | - | chr1_4:75151067-75151086 | None:intergenic | 30.0% | |
TTTCATCAGACTATTTGGAT+TGG | + | chr1_4:75151164-75151183 | Msa0185080:intron | 30.0% | |
!! | AAACATAAATAGGCCTTGTT+TGG | - | chr1_4:75151517-75151536 | None:intergenic | 30.0% |
! | ATACATTAGTTTACGAGAAG+AGG | + | chr1_4:75151739-75151758 | Msa0185080:intron | 30.0% |
ACTAGAAGTCACTATATCAT+AGG | - | chr1_4:75151811-75151830 | None:intergenic | 30.0% | |
GTCTAATTATACTTGGAAAG+TGG | + | chr1_4:75151829-75151848 | Msa0185080:intron | 30.0% | |
!!! | TTTTGAGCTTGCTAATTTTG+AGG | + | chr1_4:75151891-75151910 | Msa0185080:intron | 30.0% |
CATAGGAAATAATCTATCCA+TGG | - | chr1_4:75152169-75152188 | None:intergenic | 30.0% | |
TTCCTATGTACCCTATAAAA+TGG | + | chr1_4:75152181-75152200 | Msa0185080:intron | 30.0% | |
! | TTCCATTTTATAGGGTACAT+AGG | - | chr1_4:75152186-75152205 | None:intergenic | 30.0% |
AACCAAATAAATGTTCTGCT+TGG | - | chr1_4:75152220-75152239 | None:intergenic | 30.0% | |
GGTATGAGTCTCAAAAATAA+GGG | - | chr1_4:75152321-75152340 | None:intergenic | 30.0% | |
ATAACATGCCACTGATAATT+GGG | - | chr1_4:75152342-75152361 | None:intergenic | 30.0% | |
AATAACATGCCACTGATAAT+TGG | - | chr1_4:75152343-75152362 | None:intergenic | 30.0% | |
TTTGTTAAGGATAAGGATGT+CGG | + | chr1_4:75152543-75152562 | Msa0185080:intron | 30.0% | |
CAAAGAGAAATAGGTATCAA+TGG | - | chr1_4:75152584-75152603 | None:intergenic | 30.0% | |
! | GATACCTATTTCTCTTTGTT+TGG | + | chr1_4:75152586-75152605 | Msa0185080:intron | 30.0% |
TATGATCAGGAATTAGGATA+AGG | + | chr1_4:75152632-75152651 | Msa0185080:intron | 30.0% | |
GCTATGAAAGATGCATTATT+GGG | - | chr1_4:75152777-75152796 | None:intergenic | 30.0% | |
TGCTATGAAAGATGCATTAT+TGG | - | chr1_4:75152778-75152797 | None:intergenic | 30.0% | |
CAGATAAGCGTAAAACTAAA+AGG | - | chr1_4:75153066-75153085 | None:intergenic | 30.0% | |
TTCTCCTTTCTTTGCAAATT+CGG | + | chr1_4:75153184-75153203 | Msa0185080:CDS | 30.0% | |
GCAAAATATATCTTCTGCTT+TGG | + | chr1_4:75153262-75153281 | Msa0185080:CDS | 30.0% | |
!! | CTTTGGAACATATTTCTGAA+AGG | + | chr1_4:75153279-75153298 | Msa0185080:CDS | 30.0% |
! | TCTTTAGTTCAGACATTTGA+AGG | - | chr1_4:75153570-75153589 | None:intergenic | 30.0% |
! | ACAAAAAGTTTAGGTGGATT+CGG | - | chr1_4:75154251-75154270 | None:intergenic | 30.0% |
! | GTAATTTGTGCCATACAAAA+AGG | - | chr1_4:75154311-75154330 | None:intergenic | 30.0% |
! | GAATTGATAGTTAATTCTCC+AGG | - | chr1_4:75154522-75154541 | None:intergenic | 30.0% |
! | GAATTGATAGTTAATTCTCC+AGG | - | chr1_4:75154522-75154541 | None:intergenic | 30.0% |
TAGACCAACAAAAAACATGA+AGG | + | chr1_4:75154747-75154766 | Msa0185080:intron | 30.0% | |
GATACAAACAAGGATATTGT+TGG | + | chr1_4:75154835-75154854 | Msa0185080:intron | 30.0% | |
ATAAAGAGATGGTTGAGATT+TGG | + | chr1_4:75154893-75154912 | Msa0185080:intron | 30.0% | |
TTGACTACAGAGTTACTTAA+AGG | - | chr1_4:75155039-75155058 | None:intergenic | 30.0% | |
! | GTATCTTTCTTCACATGTTT+TGG | + | chr1_4:75155091-75155110 | Msa0185080:intron | 30.0% |
GATGTCTGTTGAGATTATTA+TGG | + | chr1_4:75155121-75155140 | Msa0185080:intron | 30.0% | |
GTTGAGATTATTATGGAAAG+TGG | + | chr1_4:75155128-75155147 | Msa0185080:intron | 30.0% | |
!! | TAAAGGTGCTAAGATATAGA+TGG | - | chr1_4:75155208-75155227 | None:intergenic | 30.0% |
TAGACAATGGCATATCTTAA+AGG | - | chr1_4:75155225-75155244 | None:intergenic | 30.0% | |
TTAAGATATGCCATTGTCTA+TGG | + | chr1_4:75155225-75155244 | Msa0185080:CDS | 30.0% | |
TAAATTTCACATTACCACTC+AGG | - | chr1_4:75155412-75155431 | None:intergenic | 30.0% | |
CAAAGACTCTCAAATTTCTT+GGG | - | chr1_4:75155575-75155594 | None:intergenic | 30.0% | |
CAAGAAATTTGAGAGTCTTT+GGG | + | chr1_4:75155574-75155593 | Msa0185080:intron | 30.0% | |
! | ATTTGGATAAAGGATTGGTA+AGG | - | chr1_4:75155631-75155650 | None:intergenic | 30.0% |
TCATTCGGTTATTTGGATAA+AGG | - | chr1_4:75155641-75155660 | None:intergenic | 30.0% | |
AATTAAGGAATTGTAGGAGA+AGG | - | chr1_4:75155812-75155831 | None:intergenic | 30.0% | |
GCATCTAATTAAGGAATTGT+AGG | - | chr1_4:75155818-75155837 | None:intergenic | 30.0% | |
TTCCTTAATTAGATGCCTAA+CGG | + | chr1_4:75155822-75155841 | Msa0185080:intron | 30.0% | |
TAAGAATCCAAGCTATACAA+TGG | - | chr1_4:75155953-75155972 | None:intergenic | 30.0% | |
GATAAAAACTACCCAATAGT+TGG | - | chr1_4:75155987-75156006 | None:intergenic | 30.0% | |
TTTATCTCACACACATTAGA+AGG | + | chr1_4:75156001-75156020 | Msa0185080:intron | 30.0% | |
! | ATTGTATTTATGGGCCTTTT+TGG | + | chr1_4:75156125-75156144 | Msa0185080:intron | 30.0% |
!! | AATTAGGATATTGAGTTGGT+AGG | + | chr1_4:75156312-75156331 | Msa0185080:intron | 30.0% |
!!! | ATATTGAGTTGGTAGGTTTT+GGG | + | chr1_4:75156319-75156338 | Msa0185080:intron | 30.0% |
! | CGTGAATGTGTTTTCTTTTT+AGG | + | chr1_4:75156508-75156527 | Msa0185080:CDS | 30.0% |
TTCTATTCTACATCTCTCTT+TGG | + | chr1_4:75156614-75156633 | Msa0185080:intron | 30.0% | |
AATATATGACAATCGGGTAT+GGG | - | chr1_4:75156708-75156727 | None:intergenic | 30.0% | |
AAATATATGACAATCGGGTA+TGG | - | chr1_4:75156709-75156728 | None:intergenic | 30.0% | |
ACGGGTAAATATATGACAAT+CGG | - | chr1_4:75156715-75156734 | None:intergenic | 30.0% | |
AAATTATTCAATGTGGGGAT+GGG | - | chr1_4:75156811-75156830 | None:intergenic | 30.0% | |
AAAATTATTCAATGTGGGGA+TGG | - | chr1_4:75156812-75156831 | None:intergenic | 30.0% | |
TGTTAAAGTGAGCATATTGT+TGG | - | chr1_4:75156892-75156911 | None:intergenic | 30.0% | |
AAAATTACTGCGATGAAATG+TGG | - | chr1_4:75157238-75157257 | None:intergenic | 30.0% | |
CACATTTCATTGCAGTAATT+TGG | + | chr1_4:75157265-75157284 | Msa0185080:intron | 30.0% | |
TCCCATGGTAAATATAAGAA+AGG | + | chr1_4:75157627-75157646 | Msa0185080:intron | 30.0% | |
CCCTTTCTTATATTTACCAT+GGG | - | chr1_4:75157631-75157650 | None:intergenic | 30.0% | |
CCCATGGTAAATATAAGAAA+GGG | + | chr1_4:75157628-75157647 | Msa0185080:intron | 30.0% | |
TCCCTTTCTTATATTTACCA+TGG | - | chr1_4:75157632-75157651 | None:intergenic | 30.0% | |
TACCCTTATCACAAGTTAAT+AGG | - | chr1_4:75157806-75157825 | None:intergenic | 30.0% | |
CAAAATTTGTGAACTGATCA+GGG | - | chr1_4:75158084-75158103 | None:intergenic | 30.0% | |
ACAAAATTTGTGAACTGATC+AGG | - | chr1_4:75158085-75158104 | None:intergenic | 30.0% | |
! | TGATCAGTTCACAAATTTTG+TGG | + | chr1_4:75158084-75158103 | Msa0185080:CDS | 30.0% |
CTGTGTTCTATAAAGATGTA+TGG | + | chr1_4:75158219-75158238 | Msa0185080:intron | 30.0% | |
TAAAGATGTATGGATGAAGA+TGG | + | chr1_4:75158229-75158248 | Msa0185080:intron | 30.0% | |
AAAGATGTATGGATGAAGAT+GGG | + | chr1_4:75158230-75158249 | Msa0185080:intron | 30.0% | |
! | ATGAATCTGGTAATGCAAAT+GGG | - | chr1_4:75158437-75158456 | None:intergenic | 30.0% |
! | TATGAATCTGGTAATGCAAA+TGG | - | chr1_4:75158438-75158457 | None:intergenic | 30.0% |
AGTATAAGACATGAAAGCAA+GGG | - | chr1_4:75158694-75158713 | None:intergenic | 30.0% | |
CTTTATGTATGTGCAAAAGA+CGG | - | chr1_4:75158719-75158738 | None:intergenic | 30.0% | |
TGAAATAGTGCTTATCTTCA+TGG | + | chr1_4:75158867-75158886 | Msa0185080:intron | 30.0% | |
GTACACATTCCAAATTTCAA+GGG | - | chr1_4:75158997-75159016 | None:intergenic | 30.0% | |
AGTACACATTCCAAATTTCA+AGG | - | chr1_4:75158998-75159017 | None:intergenic | 30.0% | |
! | AATTTGGAATGTGTACTTCA+AGG | + | chr1_4:75159001-75159020 | Msa0185080:intron | 30.0% |
TTCGCAAAACATTCTTTACA+TGG | - | chr1_4:75159118-75159137 | None:intergenic | 30.0% | |
AATACAATGGTCAATAATGC+GGG | - | chr1_4:75159229-75159248 | None:intergenic | 30.0% | |
CAGTCAATATTACTGTCAAA+TGG | + | chr1_4:75159269-75159288 | Msa0185080:intron | 30.0% | |
!!! | ATGGTGGTTTTAAAAATAGG+GGG | - | chr1_4:75159456-75159475 | None:intergenic | 30.0% |
!!! | TCCCCCTATTATACATTTTT+TGG | + | chr1_4:75159481-75159500 | Msa0185080:intron | 30.0% |
CAAATCATCAAAATTGATGG+GGG | - | chr1_4:75159514-75159533 | None:intergenic | 30.0% | |
TACAGTTGTATGACAGAAAA+CGG | + | chr1_4:75159680-75159699 | Msa0185080:intron | 30.0% | |
!!! | GACCAACATTTTAGTTCTTT+TGG | + | chr1_4:75159751-75159770 | Msa0185080:intron | 30.0% |
GACCAAAAGAACTAAAATGT+TGG | - | chr1_4:75159756-75159775 | None:intergenic | 30.0% | |
AAGAGGAAATGGAATACAAA+AGG | - | chr1_4:75159974-75159993 | None:intergenic | 30.0% | |
!! | AGAGGTATTATGTATTCAAG+AGG | - | chr1_4:75159991-75160010 | None:intergenic | 30.0% |
TAGTTATGTGTGTCTGTATT+AGG | - | chr1_4:75160185-75160204 | None:intergenic | 30.0% | |
TTAACAGCATCTAGTCAAAA+AGG | + | chr1_4:75160296-75160315 | Msa0185080:intron | 30.0% | |
! | CATTAAAGAGCGATAGTTTT+TGG | + | chr1_4:75160539-75160558 | Msa0185080:exon | 30.0% |
! | ATCGTTTTCATGGTGAATCA+CGG | - | chr1_4:75150462-75150481 | None:intergenic | 35.0% |
!! | TAAAGAGTAGCATCGGTTAA+GGG | + | chr1_4:75150904-75150923 | Msa0185080:intron | 35.0% |
!!! | GTGTAGTTTTTTGTGTCCTT+TGG | + | chr1_4:75151085-75151104 | Msa0185080:intron | 35.0% |
!! | AGCTTGTTAGCAACTTCATA+TGG | - | chr1_4:75151540-75151559 | None:intergenic | 35.0% |
AGCCAAGCAGAACATTTATT+TGG | + | chr1_4:75152215-75152234 | Msa0185080:intron | 35.0% | |
GTATTCACTAGATAGTGAAG+TGG | + | chr1_4:75152271-75152290 | Msa0185080:intron | 35.0% | |
GGGTATGAGTCTCAAAAATA+AGG | - | chr1_4:75152322-75152341 | None:intergenic | 35.0% | |
AATGACGTTGTAACAAGCTT+TGG | + | chr1_4:75152366-75152385 | Msa0185080:intron | 35.0% | |
!! | GATTTCAATTAGAGCACTGT+GGG | - | chr1_4:75152417-75152436 | None:intergenic | 35.0% |
!! | TGATTTCAATTAGAGCACTG+TGG | - | chr1_4:75152418-75152437 | None:intergenic | 35.0% |
CAGTGCTCTAATTGAAATCA+CGG | + | chr1_4:75152418-75152437 | Msa0185080:intron | 35.0% | |
ATTTATATGCATGTCTGTGC+TGG | + | chr1_4:75152443-75152462 | Msa0185080:intron | 35.0% | |
TGTCTCGTTTCAAAACAAAG+TGG | - | chr1_4:75152510-75152529 | None:intergenic | 35.0% | |
GGAATTAGGATAAGGATGTT+TGG | + | chr1_4:75152640-75152659 | Msa0185080:intron | 35.0% | |
GTATGTCATGCCAAAATGAA+AGG | - | chr1_4:75152819-75152838 | None:intergenic | 35.0% | |
TTATCTGACGTCGTTATCTT+AGG | + | chr1_4:75153079-75153098 | Msa0185080:intron | 35.0% | |
AGTCATGAACTTGAGTAACA+GGG | - | chr1_4:75153235-75153254 | None:intergenic | 35.0% | |
! | TTAAGTTGTCATCAAGTACC+AGG | + | chr1_4:75153378-75153397 | Msa0185080:CDS | 35.0% |
TAAGTTGTCATCAAGTACCA+GGG | + | chr1_4:75153379-75153398 | Msa0185080:CDS | 35.0% | |
AGATTTAGTGATCCCTTCAA+TGG | - | chr1_4:75153414-75153433 | None:intergenic | 35.0% | |
AAGCATGCATCTGACATAAA+AGG | + | chr1_4:75153443-75153462 | Msa0185080:CDS | 35.0% | |
CATAAAAGGTTCCTCTGTTA+AGG | + | chr1_4:75153457-75153476 | Msa0185080:CDS | 35.0% | |
TTGGAAACAAACCTTAACAG+AGG | - | chr1_4:75153471-75153490 | None:intergenic | 35.0% | |
CTGAACTAAAGAACCTAAGT+AGG | + | chr1_4:75153578-75153597 | Msa0185080:intron | 35.0% | |
AACTAAAGAACCTAAGTAGG+CGG | + | chr1_4:75153581-75153600 | Msa0185080:intron | 35.0% | |
TTGGTAGAGAACAAGATATC+TGG | - | chr1_4:75154070-75154089 | None:intergenic | 35.0% | |
GATTGAGAATAAAACGACTG+TGG | - | chr1_4:75154400-75154419 | None:intergenic | 35.0% | |
AAACAAATCCAGAATCGTTG+TGG | - | chr1_4:75154497-75154516 | None:intergenic | 35.0% | |
! | GATTCTGGATTTGTTTATCC+TGG | + | chr1_4:75154501-75154520 | Msa0185080:intron | 35.0% |
AAACAAATCCAGAATCGTTG+TGG | - | chr1_4:75154497-75154516 | None:intergenic | 35.0% | |
! | GATTCTGGATTTGTTTATCC+TGG | + | chr1_4:75154501-75154520 | Msa0185080:intron | 35.0% |
!!! | TGGACCTTCATGTTTTTTGT+TGG | - | chr1_4:75154754-75154773 | None:intergenic | 35.0% |
!! | CAAAAGTGCACCTTTTCATT+TGG | + | chr1_4:75154780-75154799 | Msa0185080:intron | 35.0% |
ACCAATATCCACTAGTAGAA+TGG | + | chr1_4:75154811-75154830 | Msa0185080:intron | 35.0% | |
CCAATATCCACTAGTAGAAT+GGG | + | chr1_4:75154812-75154831 | Msa0185080:intron | 35.0% | |
CAATATCCACTAGTAGAATG+GGG | + | chr1_4:75154813-75154832 | Msa0185080:intron | 35.0% | |
AAACAAGGATATTGTTGGGT+GGG | + | chr1_4:75154840-75154859 | Msa0185080:intron | 35.0% | |
!! | TGGTTGAGATTTGGTGTAAA+CGG | + | chr1_4:75154902-75154921 | Msa0185080:intron | 35.0% |
TCTGTGATAGTTGAATCCTT+AGG | + | chr1_4:75154999-75155018 | Msa0185080:intron | 35.0% | |
! | AAGTTGTGTTTTGTCATTGC+AGG | + | chr1_4:75155161-75155180 | Msa0185080:intron | 35.0% |
AGATATAGATGGTAGACTCT+TGG | - | chr1_4:75155197-75155216 | None:intergenic | 35.0% | |
TCAGATGCTACAATAGTTCT+TGG | + | chr1_4:75155252-75155271 | Msa0185080:CDS | 35.0% | |
AATGGCATTTACCTTCTAAC+AGG | + | chr1_4:75155342-75155361 | Msa0185080:intron | 35.0% | |
TTTACCTTCTAACAGGAATG+TGG | + | chr1_4:75155349-75155368 | Msa0185080:intron | 35.0% | |
TTACCTTCTAACAGGAATGT+GGG | + | chr1_4:75155350-75155369 | Msa0185080:intron | 35.0% | |
AATTCTAGTAGGAAAGAGGA+TGG | + | chr1_4:75155495-75155514 | Msa0185080:intron | 35.0% | |
ATTCTAGTAGGAAAGAGGAT+GGG | + | chr1_4:75155496-75155515 | Msa0185080:intron | 35.0% | |
CCAAAGACTCTCAAATTTCT+TGG | - | chr1_4:75155576-75155595 | None:intergenic | 35.0% | |
CCAAGAAATTTGAGAGTCTT+TGG | + | chr1_4:75155573-75155592 | Msa0185080:intron | 35.0% | |
CGGTTATTTGGATAAAGGAT+TGG | - | chr1_4:75155636-75155655 | None:intergenic | 35.0% | |
TGTAATAGATAGGGAAGTTG+TGG | - | chr1_4:75155674-75155693 | None:intergenic | 35.0% | |
TTCCGTTAGGCATCTAATTA+AGG | - | chr1_4:75155827-75155846 | None:intergenic | 35.0% | |
TAATTAGATGCCTAACGGAA+AGG | + | chr1_4:75155827-75155846 | Msa0185080:intron | 35.0% | |
TAGAGCCATTAATGATAGTC+CGG | - | chr1_4:75155893-75155912 | None:intergenic | 35.0% | |
TTAGTCTCCATTGTATAGCT+TGG | + | chr1_4:75155943-75155962 | Msa0185080:intron | 35.0% | |
AAAGTGACTCATCCAACTAT+TGG | + | chr1_4:75155972-75155991 | Msa0185080:intron | 35.0% | |
AAGTGACTCATCCAACTATT+GGG | + | chr1_4:75155973-75155992 | Msa0185080:intron | 35.0% | |
TAGTGCAGCTAACTAATGAA+TGG | - | chr1_4:75156038-75156057 | None:intergenic | 35.0% | |
AAGAATACGACATGCCAAAA+AGG | - | chr1_4:75156142-75156161 | None:intergenic | 35.0% | |
!!! | GATATTGAGTTGGTAGGTTT+TGG | + | chr1_4:75156318-75156337 | Msa0185080:intron | 35.0% |
TGAAAGAGTTCATGTGATTG+TGG | + | chr1_4:75156456-75156475 | Msa0185080:CDS | 35.0% | |
! | GGCAATACAAATACGTTTTG+AGG | - | chr1_4:75156482-75156501 | None:intergenic | 35.0% |
TGGTGATAACCATAAATTGC+AGG | + | chr1_4:75156555-75156574 | Msa0185080:CDS | 35.0% | |
AAAACAGAGAGTGAATACAG+AGG | - | chr1_4:75156588-75156607 | None:intergenic | 35.0% | |
TACATCTCTCTTTGGTACAA+AGG | + | chr1_4:75156622-75156641 | Msa0185080:intron | 35.0% | |
ATATATGACAATCGGGTATG+GGG | - | chr1_4:75156707-75156726 | None:intergenic | 35.0% | |
CGGGTAAATATATGACAATC+GGG | - | chr1_4:75156714-75156733 | None:intergenic | 35.0% | |
AATTATTCAATGTGGGGATG+GGG | - | chr1_4:75156810-75156829 | None:intergenic | 35.0% | |
GCATTACAACATTTCTCTAG+AGG | - | chr1_4:75156864-75156883 | None:intergenic | 35.0% | |
GTTGCCCCTTTAAATATCAA+TGG | + | chr1_4:75156933-75156952 | Msa0185080:intron | 35.0% | |
AAAACCCGTCAAATTGAGTT+TGG | + | chr1_4:75157142-75157161 | Msa0185080:intron | 35.0% | |
!! | TGGAAACTGGTAGTTTGTTT+GGG | - | chr1_4:75157218-75157237 | None:intergenic | 35.0% |
TTAGCAACACTACTTACGAA+AGG | + | chr1_4:75157380-75157399 | Msa0185080:intron | 35.0% | |
AAGTAGTAGAGTATGGCATT+GGG | - | chr1_4:75157414-75157433 | None:intergenic | 35.0% | |
AAAGTAGTAGAGTATGGCAT+TGG | - | chr1_4:75157415-75157434 | None:intergenic | 35.0% | |
CACTGCAAGAATAAGCATTT+CGG | + | chr1_4:75157704-75157723 | Msa0185080:intron | 35.0% | |
TAAGTTCAAAAAGGAGAGTG+AGG | - | chr1_4:75157848-75157867 | None:intergenic | 35.0% | |
GGATGAGATAATGAATCATG+AGG | - | chr1_4:75158016-75158035 | None:intergenic | 35.0% | |
! | TACTTGTAGCTGACTTAACA+TGG | + | chr1_4:75158125-75158144 | Msa0185080:intron | 35.0% |
TGCATTACCAGATTCATATG+CGG | + | chr1_4:75158440-75158459 | Msa0185080:CDS | 35.0% | |
GAGTATAAGACATGAAAGCA+AGG | - | chr1_4:75158695-75158714 | None:intergenic | 35.0% | |
!!! | AATTTTTTAGGGTTTGAGGG+AGG | + | chr1_4:75158899-75158918 | Msa0185080:intron | 35.0% |
!!! | ATTTTTTAGGGTTTGAGGGA+GGG | + | chr1_4:75158900-75158919 | Msa0185080:intron | 35.0% |
TTTGAACAAAAGACGTGACA+AGG | - | chr1_4:75159055-75159074 | None:intergenic | 35.0% | |
TATTACTGTCAAATGGGTCT+CGG | + | chr1_4:75159276-75159295 | Msa0185080:intron | 35.0% | |
CAATAAAAATGGAGAACACG+CGG | - | chr1_4:75159323-75159342 | None:intergenic | 35.0% | |
TCTACTCTTTCAATGAGACT+CGG | + | chr1_4:75159368-75159387 | Msa0185080:intron | 35.0% | |
! | TGAGACTCGGTTTAAATTGT+AGG | + | chr1_4:75159381-75159400 | Msa0185080:intron | 35.0% |
! | GTTTTCTGTCATACAACTGT+AGG | - | chr1_4:75159681-75159700 | None:intergenic | 35.0% |
!! | CCTTGTAGTTATTTTCAGCT+CGG | - | chr1_4:75159732-75159751 | None:intergenic | 35.0% |
GCTATGTTATAAGTTCCGAT+TGG | + | chr1_4:75159805-75159824 | Msa0185080:intron | 35.0% | |
!!! | GAAATAGAACAGTTTTAGGC+TGG | + | chr1_4:75159921-75159940 | Msa0185080:intron | 35.0% |
TGGAGTTATTATCTGAGCTT+GGG | + | chr1_4:75159941-75159960 | Msa0185080:intron | 35.0% | |
!! | ATTAGGCATTGATGAGGAAA+TGG | - | chr1_4:75160168-75160187 | None:intergenic | 35.0% |
ATTAAGCAGCACATTGCTAA+CGG | + | chr1_4:75160325-75160344 | Msa0185080:intron | 35.0% | |
! | TATTTCTATGATGCAGCTTC+AGG | + | chr1_4:75160443-75160462 | Msa0185080:intron | 35.0% |
ATTTCTATGATGCAGCTTCA+GGG | + | chr1_4:75160444-75160463 | Msa0185080:intron | 35.0% | |
ATCTATCGGATTGCATAAGT+AGG | - | chr1_4:75160653-75160672 | None:intergenic | 35.0% | |
AAGAGAGTGAGATTGGAGAA+TGG | - | chr1_4:75150181-75150200 | None:intergenic | 40.0% | |
AGAGAGAAAGAGAGTGAGAT+TGG | - | chr1_4:75150188-75150207 | None:intergenic | 40.0% | |
!! | AGGTTCTATTGGTTCTGTCA+TGG | - | chr1_4:75150213-75150232 | None:intergenic | 40.0% |
TGTGATGTGGAAGGTTCTAT+TGG | - | chr1_4:75150224-75150243 | None:intergenic | 40.0% | |
!!! | AGAAGATGAGTTTTGGGATG+GGG | - | chr1_4:75150298-75150317 | None:intergenic | 40.0% |
!!! | GAGAAGATGAGTTTTGGGAT+GGG | - | chr1_4:75150299-75150318 | None:intergenic | 40.0% |
! | GGTTTGTTTGAGTGTGAGAA+GGG | - | chr1_4:75150336-75150355 | None:intergenic | 40.0% |
! | CAACTACGACATCGTTTTCA+TGG | - | chr1_4:75150472-75150491 | None:intergenic | 40.0% |
GAAAACGATGTCGTAGTTGA+TGG | + | chr1_4:75150473-75150492 | Msa0185080:CDS | 40.0% | |
!! | CTAAAGAGTAGCATCGGTTA+AGG | + | chr1_4:75150903-75150922 | Msa0185080:intron | 40.0% |
GACACAAAAAACTACACTCC+TGG | - | chr1_4:75151082-75151101 | None:intergenic | 40.0% | |
TGATAAACACTTACTCCCTC+CGG | + | chr1_4:75151324-75151343 | Msa0185080:intron | 40.0% | |
TGCTTATAAATGTGACCGGA+GGG | - | chr1_4:75151458-75151477 | None:intergenic | 40.0% | |
TTGCTTATAAATGTGACCGG+AGG | - | chr1_4:75151457-75151476 | None:intergenic | 40.0% | |
TTGCTTATAAATGTGACCGG+AGG | + | chr1_4:75151457-75151476 | Msa0185080:intron | 40.0% | |
TGCTTATAAATGTGACCGGA+GGG | + | chr1_4:75151458-75151477 | Msa0185080:intron | 40.0% | |
! | TGAGGCGTTAATACTGTTGA+TGG | + | chr1_4:75151909-75151928 | Msa0185080:intron | 40.0% |
GAAGAGATAGAATGTTAGCC+AGG | - | chr1_4:75152058-75152077 | None:intergenic | 40.0% | |
AGATAGTGAAGTGGATGATG+TGG | + | chr1_4:75152280-75152299 | Msa0185080:intron | 40.0% | |
GATAGTGAAGTGGATGATGT+GGG | + | chr1_4:75152281-75152300 | Msa0185080:intron | 40.0% | |
GACTCATACCCAATTATCAG+TGG | + | chr1_4:75152331-75152350 | Msa0185080:intron | 40.0% | |
AGGTTGCTGATATGAATAGC+CGG | + | chr1_4:75152473-75152492 | Msa0185080:intron | 40.0% | |
ATGGATAGATTTGAGCACCT+TGG | + | chr1_4:75153110-75153129 | Msa0185080:CDS | 40.0% | |
TGGATAGATTTGAGCACCTT+GGG | + | chr1_4:75153111-75153130 | Msa0185080:CDS | 40.0% | |
GGATCCGAATTTGCAAAGAA+AGG | - | chr1_4:75153191-75153210 | None:intergenic | 40.0% | |
ATGAACTTGAGTAACAGGGA+CGG | - | chr1_4:75153231-75153250 | None:intergenic | 40.0% | |
CAGTCATGAACTTGAGTAAC+AGG | - | chr1_4:75153236-75153255 | None:intergenic | 40.0% | |
CTGTTACTCAAGTTCATGAC+TGG | + | chr1_4:75153234-75153253 | Msa0185080:CDS | 40.0% | |
! | TTCTGAAAGGACTTCTGCTA+AGG | + | chr1_4:75153292-75153311 | Msa0185080:CDS | 40.0% |
AGGACTTCTGCTAAGGAAAA+TGG | + | chr1_4:75153299-75153318 | Msa0185080:CDS | 40.0% | |
GGACTTCTGCTAAGGAAAAT+GGG | + | chr1_4:75153300-75153319 | Msa0185080:CDS | 40.0% | |
CATAGCAACATCTTGATCAG+CGG | - | chr1_4:75153336-75153355 | None:intergenic | 40.0% | |
TTCAATGGAACATGAATCCC+TGG | - | chr1_4:75153399-75153418 | None:intergenic | 40.0% | |
AGGGATTCATGTTCCATTGA+AGG | + | chr1_4:75153398-75153417 | Msa0185080:CDS | 40.0% | |
GGGATTCATGTTCCATTGAA+GGG | + | chr1_4:75153399-75153418 | Msa0185080:CDS | 40.0% | |
TAGATTTACTACCGGTGGTT+TGG | - | chr1_4:75153712-75153731 | None:intergenic | 40.0% | |
AAGGATAGATTTACTACCGG+TGG | - | chr1_4:75153717-75153736 | None:intergenic | 40.0% | |
TGAATCCATAACAGCTCTTC+AGG | + | chr1_4:75153804-75153823 | Msa0185080:intron | 40.0% | |
AATAGCCTGAAGAGCTGTTA+TGG | - | chr1_4:75153812-75153831 | None:intergenic | 40.0% | |
TGTTCTCTACCAACACATGT+TGG | + | chr1_4:75154077-75154096 | Msa0185080:CDS | 40.0% | |
! | TCGAACACACAACCTTTTGA+GGG | - | chr1_4:75154130-75154149 | None:intergenic | 40.0% |
! | ATCGAACACACAACCTTTTG+AGG | - | chr1_4:75154131-75154150 | None:intergenic | 40.0% |
TACCTTTGTAAGTGCCCTTT+GGG | + | chr1_4:75154195-75154214 | Msa0185080:intron | 40.0% | |
AAAAGGGCAGTAAAAGGTCT+AGG | - | chr1_4:75154375-75154394 | None:intergenic | 40.0% | |
! | TAGACCTTTTACTGCCCTTT+TGG | + | chr1_4:75154374-75154393 | Msa0185080:intron | 40.0% |
TAAAACGACTGTGGCCAAAA+GGG | - | chr1_4:75154391-75154410 | None:intergenic | 40.0% | |
ATAAAACGACTGTGGCCAAA+AGG | - | chr1_4:75154392-75154411 | None:intergenic | 40.0% | |
! | AAGGTGCACTTTTGCTAACT+TGG | - | chr1_4:75154774-75154793 | None:intergenic | 40.0% |
! | CCCATTCTACTAGTGGATAT+TGG | - | chr1_4:75154815-75154834 | None:intergenic | 40.0% |
TTGTATCCCCATTCTACTAG+TGG | - | chr1_4:75154822-75154841 | None:intergenic | 40.0% | |
GTAGAATGGGGATACAAACA+AGG | + | chr1_4:75154825-75154844 | Msa0185080:intron | 40.0% | |
CAAACAAGGATATTGTTGGG+TGG | + | chr1_4:75154839-75154858 | Msa0185080:intron | 40.0% | |
TTAAGATGATGTGCAGGAGT+GGG | - | chr1_4:75154976-75154995 | None:intergenic | 40.0% | |
AGATGCTTAAGATGATGTGC+AGG | - | chr1_4:75154982-75155001 | None:intergenic | 40.0% | |
ATCTGAGCATCCATAGACAA+TGG | - | chr1_4:75155238-75155257 | None:intergenic | 40.0% | |
ACAATAGTTCTTGGAGCAGT+TGG | + | chr1_4:75155261-75155280 | Msa0185080:CDS | 40.0% | |
TTTCCCACATTCCTGTTAGA+AGG | - | chr1_4:75155356-75155375 | None:intergenic | 40.0% | |
TGTCATATTGTCATCCTGAG+TGG | + | chr1_4:75155395-75155414 | Msa0185080:intron | 40.0% | |
GACCAAGCTCTCTAATTCTT+GGG | - | chr1_4:75155605-75155624 | None:intergenic | 40.0% | |
AGACCAAGCTCTCTAATTCT+TGG | - | chr1_4:75155606-75155625 | None:intergenic | 40.0% | |
ATTCTCTTACTGATGCAACC+CGG | + | chr1_4:75155871-75155890 | Msa0185080:intron | 40.0% | |
AGAGCCATTAATGATAGTCC+GGG | - | chr1_4:75155892-75155911 | None:intergenic | 40.0% | |
CATTAGTTAGCTGCACTATC+AGG | + | chr1_4:75156040-75156059 | Msa0185080:intron | 40.0% | |
!!! | AGTTGGTAGGTTTTGGGATA+TGG | + | chr1_4:75156325-75156344 | Msa0185080:intron | 40.0% |
CTGAGTATTAGAGTAGCTGA+TGG | + | chr1_4:75156364-75156383 | Msa0185080:intron | 40.0% | |
TGGTTATCACCAACCATAAG+AGG | - | chr1_4:75156547-75156566 | None:intergenic | 40.0% | |
ATCTCTCTTTGGTACAAAGG+AGG | + | chr1_4:75156625-75156644 | Msa0185080:intron | 40.0% | |
TCTCTCTTTGGTACAAAGGA+GGG | + | chr1_4:75156626-75156645 | Msa0185080:intron | 40.0% | |
TTCAATTTCTCATCCCCGTT+GGG | - | chr1_4:75156751-75156770 | None:intergenic | 40.0% | |
! | ATAGTTTTCTGCATTCGGGA+CGG | + | chr1_4:75157009-75157028 | Msa0185080:intron | 40.0% |
! | TTTTCCCCGATTCCAAAACA+CGG | - | chr1_4:75157088-75157107 | None:intergenic | 40.0% |
!! | TTTTGACTGGGTATGGGTAT+GGG | - | chr1_4:75157117-75157136 | None:intergenic | 40.0% |
!!! | ATTTTGACTGGGTATGGGTA+TGG | - | chr1_4:75157118-75157137 | None:intergenic | 40.0% |
ATACCCATACCCAGTCAAAA+TGG | + | chr1_4:75157117-75157136 | Msa0185080:intron | 40.0% | |
TACCCATACCCAGTCAAAAT+GGG | + | chr1_4:75157118-75157137 | Msa0185080:intron | 40.0% | |
CGAACCAAACTCAATTTGAC+GGG | - | chr1_4:75157149-75157168 | None:intergenic | 40.0% | |
CCGAACCAAACTCAATTTGA+CGG | - | chr1_4:75157150-75157169 | None:intergenic | 40.0% | |
CCGTCAAATTGAGTTTGGTT+CGG | + | chr1_4:75157147-75157166 | Msa0185080:intron | 40.0% | |
! | CGTCAAATTGAGTTTGGTTC+GGG | + | chr1_4:75157148-75157167 | Msa0185080:intron | 40.0% |
!! | AAATTGAGTTTGGTTCGGGT+GGG | + | chr1_4:75157152-75157171 | Msa0185080:intron | 40.0% |
!! | GGAAACTGGTAGTTTGTTTG+GGG | - | chr1_4:75157217-75157236 | None:intergenic | 40.0% |
!! | GTGGAAACTGGTAGTTTGTT+TGG | - | chr1_4:75157219-75157238 | None:intergenic | 40.0% |
GTAGGCAAAGTAGTAGAGTA+TGG | - | chr1_4:75157421-75157440 | None:intergenic | 40.0% | |
GATAGAGAGAGAAAGAAGGT+AGG | - | chr1_4:75157439-75157458 | None:intergenic | 40.0% | |
GAGAGATAGAGAGAGAAAGA+AGG | - | chr1_4:75157443-75157462 | None:intergenic | 40.0% | |
TTACCATGGGATTACATGTC+AGG | - | chr1_4:75157618-75157637 | None:intergenic | 40.0% | |
TGGGGGTAACATGTGTTATA+CGG | - | chr1_4:75157911-75157930 | None:intergenic | 40.0% | |
TAACACATGTTACCCCCAAT+TGG | + | chr1_4:75157913-75157932 | Msa0185080:CDS | 40.0% | |
GATTCATTATCTCATCCAGC+TGG | + | chr1_4:75158019-75158038 | Msa0185080:CDS | 40.0% | |
TTTGACTGCAGATTCCAAAC+TGG | + | chr1_4:75158376-75158395 | Msa0185080:intron | 40.0% | |
TGTGCTTCATGTGTACTTCA+AGG | + | chr1_4:75158644-75158663 | Msa0185080:CDS | 40.0% | |
TTCATGTGTACTTCAAGGAC+TGG | + | chr1_4:75158649-75158668 | Msa0185080:CDS | 40.0% | |
!! | TACTTCAAGGACTGGCTATA+TGG | + | chr1_4:75158657-75158676 | Msa0185080:CDS | 40.0% |
AGTGCTTATCTTCATGGAGA+TGG | + | chr1_4:75158873-75158892 | Msa0185080:intron | 40.0% | |
TTGCGAATGTCCTCAGAATT+TGG | + | chr1_4:75159131-75159150 | Msa0185080:intron | 40.0% | |
GTATAATAGGGGGACCAAAA+TGG | - | chr1_4:75159475-75159494 | None:intergenic | 40.0% | |
GTTGTATGACAGAAAACGGT+AGG | + | chr1_4:75159684-75159703 | Msa0185080:intron | 40.0% | |
CCGAGCTGAAAATAACTACA+AGG | + | chr1_4:75159729-75159748 | Msa0185080:intron | 40.0% | |
TGTTATAAGTTCCGATTGGC+TGG | + | chr1_4:75159809-75159828 | Msa0185080:intron | 40.0% | |
GAAAGTGAGTGCAGTTACAT+AGG | + | chr1_4:75159863-75159882 | Msa0185080:intron | 40.0% | |
CTGGAGTTATTATCTGAGCT+TGG | + | chr1_4:75159940-75159959 | Msa0185080:intron | 40.0% | |
AAGATGGAGAAACTCGATTG+AGG | - | chr1_4:75160112-75160131 | None:intergenic | 40.0% | |
!! | GTCTGTATTAGGCATTGATG+AGG | - | chr1_4:75160174-75160193 | None:intergenic | 40.0% |
TCAACTTTACTGTCTGCAAG+CGG | + | chr1_4:75160475-75160494 | Msa0185080:CDS | 40.0% | |
!! | TCTGCAAGCGGATTAATCAT+CGG | + | chr1_4:75160487-75160506 | Msa0185080:CDS | 40.0% |
ATTTCGCTTGCCAATTGCAT+CGG | + | chr1_4:75160582-75160601 | Msa0185080:three_prime_UTR | 40.0% | |
TATCGGATTGCATAAGTAGG+TGG | - | chr1_4:75160650-75160669 | None:intergenic | 40.0% | |
! | TTGGGTTGTGTGGATGATGA+TGG | - | chr1_4:75150074-75150093 | None:intergenic | 45.0% |
TGATGTGGCTTGAAGTGGTT+GGG | - | chr1_4:75150092-75150111 | None:intergenic | 45.0% | |
!!! | TGAGTTTTGGGATGGGGATT+AGG | - | chr1_4:75150292-75150311 | None:intergenic | 45.0% |
!!! | GGAGAAGATGAGTTTTGGGA+TGG | - | chr1_4:75150300-75150319 | None:intergenic | 45.0% |
! | GGTCGGAGAAGATGAGTTTT+GGG | - | chr1_4:75150304-75150323 | None:intergenic | 45.0% |
AGTGTGAGAAGGGATTGTGT+GGG | - | chr1_4:75150326-75150345 | None:intergenic | 45.0% | |
! | GGGTTTGTTTGAGTGTGAGA+AGG | - | chr1_4:75150337-75150356 | None:intergenic | 45.0% |
! | GGTTGAGATCTGAAGCGAAT+CGG | - | chr1_4:75150405-75150424 | None:intergenic | 45.0% |
! | GTTTTCATGGTGAATCACGG+AGG | - | chr1_4:75150459-75150478 | None:intergenic | 45.0% |
GCAGGATCTTTATTCGAACG+TGG | - | chr1_4:75150563-75150582 | None:intergenic | 45.0% | |
CAAACATCAGCAACAGAAGC+AGG | - | chr1_4:75150581-75150600 | None:intergenic | 45.0% | |
CTGCTTCTGTTGCTGATGTT+TGG | + | chr1_4:75150579-75150598 | Msa0185080:CDS | 45.0% | |
CCATCAAACGCAGAAGTAGA+AGG | - | chr1_4:75150605-75150624 | None:intergenic | 45.0% | |
CCTTCTACTTCTGCGTTTGA+TGG | + | chr1_4:75150602-75150621 | Msa0185080:CDS | 45.0% | |
! | ACGTCTTCCATCAGAAGTGT+CGG | - | chr1_4:75150718-75150737 | None:intergenic | 45.0% |
AAGACGTGTCCAGTGTTATG+CGG | + | chr1_4:75150731-75150750 | Msa0185080:intron | 45.0% | |
GTGTGTCCAGTGTTATGTGT+CGG | + | chr1_4:75150759-75150778 | Msa0185080:intron | 45.0% | |
AGCTTATAGCATACTCCCTC+CGG | - | chr1_4:75151476-75151495 | None:intergenic | 45.0% | |
AGCTTATGCGCAGCAATAGT+CGG | + | chr1_4:75151973-75151992 | Msa0185080:intron | 45.0% | |
!! | GTCTTATCTGCAAAAGCACC+TGG | + | chr1_4:75152037-75152056 | Msa0185080:CDS | 45.0% |
GAAGGCGAAGAATCAAAGGT+TGG | + | chr1_4:75152101-75152120 | Msa0185080:intron | 45.0% | |
GGTTGCTGATATGAATAGCC+GGG | + | chr1_4:75152474-75152493 | Msa0185080:intron | 45.0% | |
CAAACTGAACTAGGAACCCA+AGG | - | chr1_4:75153130-75153149 | None:intergenic | 45.0% | |
CTTGGGTTCCTAGTTCAGTT+TGG | + | chr1_4:75153128-75153147 | Msa0185080:CDS | 45.0% | |
CCTTATCGCCAAACTGAACT+AGG | - | chr1_4:75153139-75153158 | None:intergenic | 45.0% | |
CCTAGTTCAGTTTGGCGATA+AGG | + | chr1_4:75153136-75153155 | Msa0185080:CDS | 45.0% | |
TGAACTTGAGTAACAGGGAC+GGG | - | chr1_4:75153230-75153249 | None:intergenic | 45.0% | |
TTGCAAGCGATTCAGCAACA+TGG | - | chr1_4:75153535-75153554 | None:intergenic | 45.0% | |
TTTCAACTTGCCGCCTACTT+AGG | - | chr1_4:75153594-75153613 | None:intergenic | 45.0% | |
! | TAAGTAGGCGGCAAGTTGAA+AGG | + | chr1_4:75153593-75153612 | Msa0185080:intron | 45.0% |
CTAAGATTGAGCCAAACCAC+CGG | + | chr1_4:75153698-75153717 | Msa0185080:intron | 45.0% | |
!! | ACATGTTGGCTCAGTTGGTA+AGG | + | chr1_4:75154091-75154110 | Msa0185080:CDS | 45.0% |
!! | TTGGCTCAGTTGGTAAGGAA+CGG | + | chr1_4:75154096-75154115 | Msa0185080:CDS | 45.0% |
! | CGAACACACAACCTTTTGAG+GGG | - | chr1_4:75154129-75154148 | None:intergenic | 45.0% |
GTACCTTTGTAAGTGCCCTT+TGG | + | chr1_4:75154194-75154213 | Msa0185080:intron | 45.0% | |
TTACACAGCCACAACGATTC+TGG | + | chr1_4:75154486-75154505 | Msa0185080:intron | 45.0% | |
TTACACAGCCACAACGATTC+TGG | + | chr1_4:75154486-75154505 | Msa0185080:intron | 45.0% | |
CTTAAGATGATGTGCAGGAG+TGG | - | chr1_4:75154977-75154996 | None:intergenic | 45.0% | |
CTCCCAAGAATTAGAGAGCT+TGG | + | chr1_4:75155600-75155619 | Msa0185080:intron | 45.0% | |
AGGGAGGTCATTCGGTTATT+TGG | - | chr1_4:75155648-75155667 | None:intergenic | 45.0% | |
GATAGGGAAGTTGTGGCTAA+GGG | - | chr1_4:75155667-75155686 | None:intergenic | 45.0% | |
AGATAGGGAAGTTGTGGCTA+AGG | - | chr1_4:75155668-75155687 | None:intergenic | 45.0% | |
! | AAAACTGACCGGCAGTTTTG+GGG | - | chr1_4:75155776-75155795 | None:intergenic | 45.0% |
! | CAAAACTGACCGGCAGTTTT+GGG | - | chr1_4:75155777-75155796 | None:intergenic | 45.0% |
CAGACAAGACCAAAACTGAC+CGG | - | chr1_4:75155787-75155806 | None:intergenic | 45.0% | |
AAGGTCAGTTCCTTTCCGTT+AGG | - | chr1_4:75155840-75155859 | None:intergenic | 45.0% | |
GCAACCCGGACTATCATTAA+TGG | + | chr1_4:75155885-75155904 | Msa0185080:intron | 45.0% | |
GAAAACACATTCACGGCAGT+TGG | - | chr1_4:75156503-75156522 | None:intergenic | 45.0% | |
AGTGAACCAGCAACCTCTTA+TGG | + | chr1_4:75156531-75156550 | Msa0185080:CDS | 45.0% | |
AACCAGCAACCTCTTATGGT+TGG | + | chr1_4:75156535-75156554 | Msa0185080:CDS | 45.0% | |
GGATGCTCACCTGCAATTTA+TGG | - | chr1_4:75156567-75156586 | None:intergenic | 45.0% | |
CTCTCTTTGGTACAAAGGAG+GGG | + | chr1_4:75156627-75156646 | Msa0185080:intron | 45.0% | |
GTTCAATTTCTCATCCCCGT+TGG | - | chr1_4:75156752-75156771 | None:intergenic | 45.0% | |
! | TAGTTTTCTGCATTCGGGAC+GGG | + | chr1_4:75157010-75157029 | Msa0185080:intron | 45.0% |
TTTCCCCGATTCCAAAACAC+GGG | - | chr1_4:75157087-75157106 | None:intergenic | 45.0% | |
ACCCATACCCAGTCAAAATG+GGG | + | chr1_4:75157119-75157138 | Msa0185080:intron | 45.0% | |
!!! | TCCCCATTTTGACTGGGTAT+GGG | - | chr1_4:75157123-75157142 | None:intergenic | 45.0% |
!!! | TTCCCCATTTTGACTGGGTA+TGG | - | chr1_4:75157124-75157143 | None:intergenic | 45.0% |
!!! | GGGTTTTCCCCATTTTGACT+GGG | - | chr1_4:75157129-75157148 | None:intergenic | 45.0% |
!! | CAAATTGAGTTTGGTTCGGG+TGG | + | chr1_4:75157151-75157170 | Msa0185080:intron | 45.0% |
! | AGTTTGTTTGGGGTGTAGCT+AGG | - | chr1_4:75157207-75157226 | None:intergenic | 45.0% |
CTGCGATGAAATGTGGAAAC+TGG | - | chr1_4:75157231-75157250 | None:intergenic | 45.0% | |
! | AGTAGAGTATGGCATTGGGT+GGG | - | chr1_4:75157410-75157429 | None:intergenic | 45.0% |
! | TAGTAGAGTATGGCATTGGG+TGG | - | chr1_4:75157411-75157430 | None:intergenic | 45.0% |
TCACACCTTCCTTGCTACTA+CGG | + | chr1_4:75157498-75157517 | Msa0185080:intron | 45.0% | |
TAGAACCGTAGTAGCAAGGA+AGG | - | chr1_4:75157506-75157525 | None:intergenic | 45.0% | |
ACTCATGTGCTCCTCCAATT+GGG | - | chr1_4:75157930-75157949 | None:intergenic | 45.0% | |
TCATCCCATCTGTTCACTGT+GGG | - | chr1_4:75157968-75157987 | None:intergenic | 45.0% | |
TTCATCCCATCTGTTCACTG+TGG | - | chr1_4:75157969-75157988 | None:intergenic | 45.0% | |
! | GTTGTCTTTTGTAGATCCCG+TGG | - | chr1_4:75158415-75158434 | None:intergenic | 45.0% |
TCAAGGACTGACTGACTACA+TGG | + | chr1_4:75159018-75159037 | Msa0185080:intron | 45.0% | |
GCATACAAGCAGCTTCATGT+GGG | - | chr1_4:75159162-75159181 | None:intergenic | 45.0% | |
TGCATACAAGCAGCTTCATG+TGG | - | chr1_4:75159163-75159182 | None:intergenic | 45.0% | |
TAATAGGGGGACCAAAATGG+TGG | - | chr1_4:75159472-75159491 | None:intergenic | 45.0% | |
GACATGGAGCATATGTGAGT+TGG | + | chr1_4:75159548-75159567 | Msa0185080:intron | 45.0% | |
CATCTCAACTTCCAGCCAAT+CGG | - | chr1_4:75159823-75159842 | None:intergenic | 45.0% | |
! | GATTGGCTGGAAGTTGAGAT+GGG | + | chr1_4:75159822-75159841 | Msa0185080:intron | 45.0% |
GGAAAAGAGTGACAGAGAAG+AGG | + | chr1_4:75159884-75159903 | Msa0185080:intron | 45.0% | |
GCTAACGGAGGAGCTTATAA+TGG | + | chr1_4:75160340-75160359 | Msa0185080:intron | 45.0% | |
TCCTGTGCAGAGTGATCTAT+CGG | - | chr1_4:75160667-75160686 | None:intergenic | 45.0% | |
ATAGATCACTCTGCACAGGA+TGG | + | chr1_4:75160667-75160686 | Msa0185080:three_prime_UTR | 45.0% | |
!!! | TTTTTTTTTTTTTTTTTGAA+AGG | + | chr1_4:75154036-75154055 | Msa0185080:intron | 5.0% |
!!! | TTTTTTTTTTTTTTTTGAAA+GGG | + | chr1_4:75154037-75154056 | Msa0185080:intron | 5.0% |
!! | ATTCATTATATATATATATA+GGG | + | chr1_4:75154713-75154732 | Msa0185080:intron | 5.0% |
!!! | ATTTTATTATTCTAAATTAA+TGG | + | chr1_4:75160750-75160769 | Msa0185080:three_prime_UTR | 5.0% |
! | CTTGAAGTGGTTGGGTTGTG+TGG | - | chr1_4:75150084-75150103 | None:intergenic | 50.0% |
GTGATGTGGCTTGAAGTGGT+TGG | - | chr1_4:75150093-75150112 | None:intergenic | 50.0% | |
ATCACCACCACAACCTTCCA+CGG | + | chr1_4:75150108-75150127 | Msa0185080:five_prime_UTR | 50.0% | |
! | TTGGAGAATGGTGATGAGCG+TGG | - | chr1_4:75150169-75150188 | None:intergenic | 50.0% |
! | GGGTCGGAGAAGATGAGTTT+TGG | - | chr1_4:75150305-75150324 | None:intergenic | 50.0% |
GTGTGAGAAGGGATTGTGTG+GGG | - | chr1_4:75150325-75150344 | None:intergenic | 50.0% | |
GAGTGTGAGAAGGGATTGTG+TGG | - | chr1_4:75150327-75150346 | None:intergenic | 50.0% | |
AAGCGAATCGGAGATTGTGG+CGG | - | chr1_4:75150393-75150412 | None:intergenic | 50.0% | |
CTGAAGCGAATCGGAGATTG+TGG | - | chr1_4:75150396-75150415 | None:intergenic | 50.0% | |
AAGGAGGAGTTGAGCGTGTT+CGG | - | chr1_4:75150426-75150445 | None:intergenic | 50.0% | |
!! | TCACGGAGGAGAGAGTATCA+AGG | - | chr1_4:75150445-75150464 | None:intergenic | 50.0% |
TGTGATGCCGACACTTCTGA+TGG | + | chr1_4:75150708-75150727 | Msa0185080:intron | 50.0% | |
ACACGTCTTCCGCATAACAC+TGG | - | chr1_4:75150743-75150762 | None:intergenic | 50.0% | |
CTGACACCGACACATAACAC+TGG | - | chr1_4:75150768-75150787 | None:intergenic | 50.0% | |
CGTGGACGCTTCAGTTTCAT+AGG | + | chr1_4:75150859-75150878 | Msa0185080:intron | 50.0% | |
TATCTCTTCTAGCCGAGCCA+GGG | + | chr1_4:75152069-75152088 | Msa0185080:CDS | 50.0% | |
ATGTCTGTGCTGGAGAGTAG+AGG | + | chr1_4:75152453-75152472 | Msa0185080:intron | 50.0% | |
GCTGATATGAATAGCCGGGT+TGG | + | chr1_4:75152478-75152497 | Msa0185080:intron | 50.0% | |
CAAAGTGGCAACTACCAACC+CGG | - | chr1_4:75152495-75152514 | None:intergenic | 50.0% | |
CAGTTTGGCGATAAGGCTGA+AGG | + | chr1_4:75153143-75153162 | Msa0185080:CDS | 50.0% | |
AACATCTTGATCAGCGGCAC+TGG | - | chr1_4:75153330-75153349 | None:intergenic | 50.0% | |
GACTGATGCATGCTCTGTCT+CGG | + | chr1_4:75153355-75153374 | Msa0185080:CDS | 50.0% | |
CCAACTGAGCCAACATGTGT+TGG | - | chr1_4:75154089-75154108 | None:intergenic | 50.0% | |
!! | CCAACACATGTTGGCTCAGT+TGG | + | chr1_4:75154086-75154105 | Msa0185080:CDS | 50.0% |
!! | TGGCTCAGTTGGTAAGGAAC+GGG | + | chr1_4:75154097-75154116 | Msa0185080:CDS | 50.0% |
!! | CACAACCTTTTGAGGGGAAG+TGG | - | chr1_4:75154123-75154142 | None:intergenic | 50.0% |
! | AGTTTAGGTGGATTCGGCTC+CGG | - | chr1_4:75154245-75154264 | None:intergenic | 50.0% |
GGGCAGTAAAAGGTCTAGGT+GGG | - | chr1_4:75154371-75154390 | None:intergenic | 50.0% | |
AGGGCAGTAAAAGGTCTAGG+TGG | - | chr1_4:75154372-75154391 | None:intergenic | 50.0% | |
GTGGCCAAAAGGGCAGTAAA+AGG | - | chr1_4:75154381-75154400 | None:intergenic | 50.0% | |
AGTTCTTGGAGCAGTTGGCA+AGG | + | chr1_4:75155266-75155285 | Msa0185080:CDS | 50.0% | |
TGTGGCTAAGGGAGGTCATT+CGG | - | chr1_4:75155656-75155675 | None:intergenic | 50.0% | |
CATAACTGCCCCAAAACTGC+CGG | + | chr1_4:75155765-75155784 | Msa0185080:intron | 50.0% | |
! | CCAAAACTGACCGGCAGTTT+TGG | - | chr1_4:75155778-75155797 | None:intergenic | 50.0% |
! | CCAAAACTGCCGGTCAGTTT+TGG | + | chr1_4:75155775-75155794 | Msa0185080:intron | 50.0% |
CACCAACCATAAGAGGTTGC+TGG | - | chr1_4:75156540-75156559 | None:intergenic | 50.0% | |
CTACACCTAGGCATGGCAAT+GGG | + | chr1_4:75156650-75156669 | Msa0185080:intron | 50.0% | |
TACACCTAGGCATGGCAATG+GGG | + | chr1_4:75156651-75156670 | Msa0185080:intron | 50.0% | |
ATGACAATCGGGTATGGGGA+CGG | - | chr1_4:75156703-75156722 | None:intergenic | 50.0% | |
TTGGGTATGGGTAGGGTAAC+GGG | - | chr1_4:75156733-75156752 | None:intergenic | 50.0% | |
GTTGGGTATGGGTAGGGTAA+CGG | - | chr1_4:75156734-75156753 | None:intergenic | 50.0% | |
GTTACCCTACCCATACCCAA+CGG | + | chr1_4:75156733-75156752 | Msa0185080:intron | 50.0% | |
TTACCCTACCCATACCCAAC+GGG | + | chr1_4:75156734-75156753 | Msa0185080:intron | 50.0% | |
TTCTCATCCCCGTTGGGTAT+GGG | - | chr1_4:75156745-75156764 | None:intergenic | 50.0% | |
TTTCTCATCCCCGTTGGGTA+TGG | - | chr1_4:75156746-75156765 | None:intergenic | 50.0% | |
TATTCAATGTGGGGATGGGG+CGG | - | chr1_4:75156807-75156826 | None:intergenic | 50.0% | |
ACGGGTTTGGGTATGGGTTT+GGG | + | chr1_4:75157028-75157047 | Msa0185080:intron | 50.0% | |
! | TTTGGGTATGGGTTTGGGGT+GGG | + | chr1_4:75157033-75157052 | Msa0185080:intron | 50.0% |
!! | GGGACGGATAACGGGTATAT+AGG | - | chr1_4:75157061-75157080 | None:intergenic | 50.0% |
CGATTCCAAAACACGGGTGT+GGG | - | chr1_4:75157081-75157100 | None:intergenic | 50.0% | |
!!! | CCACACCCGTGTTTTGGAAT+CGG | + | chr1_4:75157079-75157098 | Msa0185080:intron | 50.0% |
!!! | CACACCCGTGTTTTGGAATC+GGG | + | chr1_4:75157080-75157099 | Msa0185080:intron | 50.0% |
!!! | ACACCCGTGTTTTGGAATCG+GGG | + | chr1_4:75157081-75157100 | Msa0185080:intron | 50.0% |
CTGGGTATGGGTATGGGTTT+GGG | - | chr1_4:75157111-75157130 | None:intergenic | 50.0% | |
ACTGGGTATGGGTATGGGTT+TGG | - | chr1_4:75157112-75157131 | None:intergenic | 50.0% | |
!! | CGGGTTTTCCCCATTTTGAC+TGG | - | chr1_4:75157130-75157149 | None:intergenic | 50.0% |
GGCAACAAAACCCATATCCG+TGG | - | chr1_4:75157181-75157200 | None:intergenic | 50.0% | |
! | GTAGTAGCAAGGAAGGTGTG+AGG | - | chr1_4:75157499-75157518 | None:intergenic | 50.0% |
TGGGTAGAACCGTAGTAGCA+AGG | - | chr1_4:75157510-75157529 | None:intergenic | 50.0% | |
AGTTGTAATCATCCCGCACG+TGG | - | chr1_4:75157536-75157555 | None:intergenic | 50.0% | |
AGGCCTGACATGTAATCCCA+TGG | + | chr1_4:75157612-75157631 | Msa0185080:intron | 50.0% | |
CACATGTTACCCCCAATTGG+AGG | + | chr1_4:75157916-75157935 | Msa0185080:CDS | 50.0% | |
TCATGTGCTCCTCCAATTGG+GGG | - | chr1_4:75157928-75157947 | None:intergenic | 50.0% | |
CTCATGTGCTCCTCCAATTG+GGG | - | chr1_4:75157929-75157948 | None:intergenic | 50.0% | |
CACTCATGTGCTCCTCCAAT+TGG | - | chr1_4:75157931-75157950 | None:intergenic | 50.0% | |
! | GAGGAGCACATGAGTGAAGT+TGG | + | chr1_4:75157935-75157954 | Msa0185080:CDS | 50.0% |
TTCTGCCCACAGTGAACAGA+TGG | + | chr1_4:75157960-75157979 | Msa0185080:CDS | 50.0% | |
TCTGCCCACAGTGAACAGAT+GGG | + | chr1_4:75157961-75157980 | Msa0185080:CDS | 50.0% | |
GAACAGATGGGATGAAGCTC+TGG | + | chr1_4:75157973-75157992 | Msa0185080:CDS | 50.0% | |
TGAACATCAGAGACACCAGC+TGG | - | chr1_4:75158037-75158056 | None:intergenic | 50.0% | |
TTGTGAACTGATCAGGGTCC+AGG | - | chr1_4:75158078-75158097 | None:intergenic | 50.0% | |
GTGGGTCACTCCAAATTCTG+AGG | - | chr1_4:75159144-75159163 | None:intergenic | 50.0% | |
!! | GGTGATAATTGGTACCGGTG+AGG | - | chr1_4:75159302-75159321 | None:intergenic | 50.0% |
CACGCGGTGATAATTGGTAC+CGG | - | chr1_4:75159307-75159326 | None:intergenic | 50.0% | |
GGAGAACACGCGGTGATAAT+TGG | - | chr1_4:75159313-75159332 | None:intergenic | 50.0% | |
! | CGATTGGCTGGAAGTTGAGA+TGG | + | chr1_4:75159821-75159840 | Msa0185080:intron | 50.0% |
AAGCAGCACATTGCTAACGG+AGG | + | chr1_4:75160328-75160347 | Msa0185080:intron | 50.0% | |
!! | AGCGGATTAATCATCGGCAG+AGG | + | chr1_4:75160493-75160512 | Msa0185080:CDS | 50.0% |
ACCTGTGTGACCGATGCAAT+TGG | - | chr1_4:75160595-75160614 | None:intergenic | 50.0% | |
TCCGATAGATCACTCTGCAC+AGG | + | chr1_4:75160663-75160682 | Msa0185080:three_prime_UTR | 50.0% | |
! | GGTGGTGATGTGGCTTGAAG+TGG | - | chr1_4:75150097-75150116 | None:intergenic | 55.0% |
! | GGAAGGTTGTGGTGGTGATG+TGG | - | chr1_4:75150107-75150126 | None:intergenic | 55.0% |
! | ATGGTGATGAGCGTGGAGGA+GGG | - | chr1_4:75150162-75150181 | None:intergenic | 55.0% |
! | AATGGTGATGAGCGTGGAGG+AGG | - | chr1_4:75150163-75150182 | None:intergenic | 55.0% |
! | GAGAATGGTGATGAGCGTGG+AGG | - | chr1_4:75150166-75150185 | None:intergenic | 55.0% |
GGGATTAGGCCGTGTTCGAA+TGG | - | chr1_4:75150278-75150297 | None:intergenic | 55.0% | |
GAGAAGGGATTGTGTGGGGT+CGG | - | chr1_4:75150321-75150340 | None:intergenic | 55.0% | |
! | AGATTGTGGCGGAGGAGATG+AGG | - | chr1_4:75150382-75150401 | None:intergenic | 55.0% |
!! | CGGAGGAGAGAGTATCAAGG+AGG | - | chr1_4:75150442-75150461 | None:intergenic | 55.0% |
CTCTGCTCTCTCTCCTCTTC+AGG | + | chr1_4:75150631-75150650 | Msa0185080:CDS | 55.0% | |
! | GCAAAAGCACGCACCTGAAG+AGG | - | chr1_4:75150647-75150666 | None:intergenic | 55.0% |
! | TCGGCGTTTTATGCCATCGC+AGG | + | chr1_4:75151992-75152011 | Msa0185080:CDS | 55.0% |
CTATCTCTTCTAGCCGAGCC+AGG | + | chr1_4:75152068-75152087 | Msa0185080:CDS | 55.0% | |
ATCTCTTCTAGCCGAGCCAG+GGG | + | chr1_4:75152070-75152089 | Msa0185080:CDS | 55.0% | |
GGGGGAAGGCGAAGAATCAA+AGG | + | chr1_4:75152097-75152116 | Msa0185080:CDS | 55.0% | |
CACCAACACCGTCCTCACAT+CGG | - | chr1_4:75154162-75154181 | None:intergenic | 55.0% | |
!! | GATGTGAGGACGGTGTTGGT+GGG | + | chr1_4:75154161-75154180 | Msa0185080:intron | 55.0% |
!! | GGCCCAAAGGGCACTTACAA+AGG | - | chr1_4:75154200-75154219 | None:intergenic | 55.0% |
TTGTAAGTGCCCTTTGGGCC+CGG | + | chr1_4:75154200-75154219 | Msa0185080:intron | 55.0% | |
AGGGAAGTTGTGGCTAAGGG+AGG | - | chr1_4:75155664-75155683 | None:intergenic | 55.0% | |
ACAAAGGAGGGGCTACACCT+AGG | + | chr1_4:75156638-75156657 | Msa0185080:intron | 55.0% | |
GCTACACCTAGGCATGGCAA+TGG | + | chr1_4:75156649-75156668 | Msa0185080:intron | 55.0% | |
TGACAATCGGGTATGGGGAC+GGG | - | chr1_4:75156702-75156721 | None:intergenic | 55.0% | |
TACCCTACCCATACCCAACG+GGG | + | chr1_4:75156735-75156754 | Msa0185080:intron | 55.0% | |
ATCCCCGTTGGGTATGGGTA+GGG | - | chr1_4:75156740-75156759 | None:intergenic | 55.0% | |
ATTCAATGTGGGGATGGGGC+GGG | - | chr1_4:75156806-75156825 | None:intergenic | 55.0% | |
! | TTCTGCATTCGGGACGGGTT+TGG | + | chr1_4:75157015-75157034 | Msa0185080:intron | 55.0% |
! | TCTGCATTCGGGACGGGTTT+GGG | + | chr1_4:75157016-75157035 | Msa0185080:intron | 55.0% |
! | ATTCGGGACGGGTTTGGGTA+TGG | + | chr1_4:75157021-75157040 | Msa0185080:intron | 55.0% |
! | TTCGGGACGGGTTTGGGTAT+GGG | + | chr1_4:75157022-75157041 | Msa0185080:intron | 55.0% |
! | GACGGGTTTGGGTATGGGTT+TGG | + | chr1_4:75157027-75157046 | Msa0185080:intron | 55.0% |
CGGGTTTGGGTATGGGTTTG+GGG | + | chr1_4:75157029-75157048 | Msa0185080:intron | 55.0% | |
GTTTGGGTATGGGTTTGGGG+TGG | + | chr1_4:75157032-75157051 | Msa0185080:intron | 55.0% | |
TCCAAAACACGGGTGTGGGA+CGG | - | chr1_4:75157077-75157096 | None:intergenic | 55.0% | |
CCGATTCCAAAACACGGGTG+TGG | - | chr1_4:75157082-75157101 | None:intergenic | 55.0% | |
!! | TTGGTTCGGGTGGGTAACCA+CGG | + | chr1_4:75157161-75157180 | Msa0185080:intron | 55.0% |
GGGTGGGTAACCACGGATAT+GGG | + | chr1_4:75157168-75157187 | Msa0185080:intron | 55.0% | |
! | GTTTGGGGTGTAGCTAGGCA+TGG | - | chr1_4:75157202-75157221 | None:intergenic | 55.0% |
! | GAGTATGGCATTGGGTGGGT+TGG | - | chr1_4:75157406-75157425 | None:intergenic | 55.0% |
! | AGCAAGGAAGGTGTGAGGTG+TGG | - | chr1_4:75157494-75157513 | None:intergenic | 55.0% |
TGTAATCATCCCGCACGTGG+TGG | - | chr1_4:75157533-75157552 | None:intergenic | 55.0% | |
CTGACCCTACGAAGCATACG+AGG | + | chr1_4:75157592-75157611 | Msa0185080:intron | 55.0% | |
CAGGCCTCGTATGCTTCGTA+GGG | - | chr1_4:75157599-75157618 | None:intergenic | 55.0% | |
TCAGGCCTCGTATGCTTCGT+AGG | - | chr1_4:75157600-75157619 | None:intergenic | 55.0% | |
!! | CAGATTCCAAACTGGCTCGC+AGG | + | chr1_4:75158384-75158403 | Msa0185080:intron | 55.0% |
TGGGACGCCGCATATGAATC+TGG | - | chr1_4:75158450-75158469 | None:intergenic | 55.0% | |
! | GCCAATTGCATCGGTCACAC+AGG | + | chr1_4:75160591-75160610 | Msa0185080:three_prime_UTR | 55.0% |
TGAGACGCCGTGGAAGGTTG+TGG | - | chr1_4:75150118-75150137 | None:intergenic | 60.0% | |
TGATGAGCGTGGAGGAGGGA+GGG | - | chr1_4:75150158-75150177 | None:intergenic | 60.0% | |
! | GTGGGAGCGTGTGATGTGGA+AGG | - | chr1_4:75150233-75150252 | None:intergenic | 60.0% |
! | CATGGTGGGAGCGTGTGATG+TGG | - | chr1_4:75150237-75150256 | None:intergenic | 60.0% |
GTTCGAATGGTTCGCGGCGT+GGG | - | chr1_4:75150265-75150284 | None:intergenic | 60.0% | |
TGTTCGAATGGTTCGCGGCG+TGG | - | chr1_4:75150266-75150285 | None:intergenic | 60.0% | |
CGCCGCGAACCATTCGAACA+CGG | + | chr1_4:75150266-75150285 | Msa0185080:CDS | 60.0% | |
GGCCGTGTTCGAATGGTTCG+CGG | - | chr1_4:75150271-75150290 | None:intergenic | 60.0% | |
GTTGGAGGAGGAAGCGAGGA+GGG | - | chr1_4:75150357-75150376 | None:intergenic | 60.0% | |
GGAGATGAGGTGGTTGGAGG+AGG | - | chr1_4:75150369-75150388 | None:intergenic | 60.0% | |
GGAGGAGATGAGGTGGTTGG+AGG | - | chr1_4:75150372-75150391 | None:intergenic | 60.0% | |
! | TTGTGGCGGAGGAGATGAGG+TGG | - | chr1_4:75150379-75150398 | None:intergenic | 60.0% |
CGAATCGGAGATTGTGGCGG+AGG | - | chr1_4:75150390-75150409 | None:intergenic | 60.0% | |
GCCATCGCAGGCTGATGAAG+AGG | + | chr1_4:75152004-75152023 | Msa0185080:CDS | 60.0% | |
GCCTCTTCATCAGCCTGCGA+TGG | - | chr1_4:75152008-75152027 | None:intergenic | 60.0% | |
TTCGGATCCTGAGATGCCCG+CGG | + | chr1_4:75153202-75153221 | Msa0185080:CDS | 60.0% | |
AGTAACAGGGACGGGAACCG+CGG | - | chr1_4:75153222-75153241 | None:intergenic | 60.0% | |
!! | TCTTGATCAGCGGCACTGGC+TGG | - | chr1_4:75153326-75153345 | None:intergenic | 60.0% |
ACGGGCCACTTCCCCTCAAA+AGG | + | chr1_4:75154115-75154134 | Msa0185080:CDS | 60.0% | |
CGATTCTCGCTGCCGATGTG+AGG | + | chr1_4:75154147-75154166 | Msa0185080:CDS | 60.0% | |
TCTCGCTGCCGATGTGAGGA+CGG | + | chr1_4:75154151-75154170 | Msa0185080:CDS | 60.0% | |
TGCCGATGTGAGGACGGTGT+TGG | + | chr1_4:75154157-75154176 | Msa0185080:CDS | 60.0% | |
! | CGATGTGAGGACGGTGTTGG+TGG | + | chr1_4:75154160-75154179 | Msa0185080:intron | 60.0% |
ACCTAGGCATGGCAATGGGG+CGG | + | chr1_4:75156654-75156673 | Msa0185080:intron | 60.0% | |
GACAATCGGGTATGGGGACG+GGG | - | chr1_4:75156701-75156720 | None:intergenic | 60.0% | |
CATCCCCGTTGGGTATGGGT+AGG | - | chr1_4:75156741-75156760 | None:intergenic | 60.0% | |
AACCTCAACCCCGTCCCCAA+CGG | + | chr1_4:75156769-75156788 | Msa0185080:intron | 60.0% | |
ATACCCGAACCCGTTGGGGA+CGG | - | chr1_4:75156782-75156801 | None:intergenic | 60.0% | |
TTCAATGTGGGGATGGGGCG+GGG | - | chr1_4:75156805-75156824 | None:intergenic | 60.0% | |
ACGGGTGTGGGACGGATAAC+GGG | - | chr1_4:75157069-75157088 | None:intergenic | 60.0% | |
CACGGGTGTGGGACGGATAA+CGG | - | chr1_4:75157070-75157089 | None:intergenic | 60.0% | |
! | TCCGTCCCACACCCGTGTTT+TGG | + | chr1_4:75157073-75157092 | Msa0185080:intron | 60.0% |
CGGGTGGGTAACCACGGATA+TGG | + | chr1_4:75157167-75157186 | Msa0185080:intron | 60.0% | |
GTTCTACCCACCACCACGTG+CGG | + | chr1_4:75157520-75157539 | Msa0185080:intron | 60.0% | |
TTCTACCCACCACCACGTGC+GGG | + | chr1_4:75157521-75157540 | Msa0185080:intron | 60.0% | |
ATCATCCCGCACGTGGTGGT+GGG | - | chr1_4:75157529-75157548 | None:intergenic | 60.0% | |
AATCATCCCGCACGTGGTGG+TGG | - | chr1_4:75157530-75157549 | None:intergenic | 60.0% | |
AGCTGAGTCTGCTACACGCC+TGG | + | chr1_4:75158057-75158076 | Msa0185080:CDS | 60.0% | |
GACTCTCCTGCGAGCCAGTT+TGG | - | chr1_4:75158393-75158412 | None:intergenic | 60.0% | |
CAAATGGGTCTCGGCCTCAC+CGG | + | chr1_4:75159285-75159304 | Msa0185080:intron | 60.0% | |
GACGCCGTGGAAGGTTGTGG+TGG | - | chr1_4:75150115-75150134 | None:intergenic | 65.0% | |
GTTTGCGGTGTGAGACGCCG+TGG | - | chr1_4:75150128-75150147 | None:intergenic | 65.0% | |
! | AGGGAGGGAGGGTGGGTTTG+CGG | - | chr1_4:75150143-75150162 | None:intergenic | 65.0% |
GTGATGAGCGTGGAGGAGGG+AGG | - | chr1_4:75150159-75150178 | None:intergenic | 65.0% | |
CGGCGTGGGTGGATCATGGT+GGG | - | chr1_4:75150251-75150270 | None:intergenic | 65.0% | |
TTCGCGGCGTGGGTGGATCA+TGG | - | chr1_4:75150255-75150274 | None:intergenic | 65.0% | |
GGTTGGAGGAGGAAGCGAGG+AGG | - | chr1_4:75150358-75150377 | None:intergenic | 65.0% | |
GGTGGTTGGAGGAGGAAGCG+AGG | - | chr1_4:75150361-75150380 | None:intergenic | 65.0% | |
GGCGGAGGAGATGAGGTGGT+TGG | - | chr1_4:75150375-75150394 | None:intergenic | 65.0% | |
TCTTCTAGCCGAGCCAGGGG+AGG | + | chr1_4:75152073-75152092 | Msa0185080:CDS | 65.0% | |
GTAACAGGGACGGGAACCGC+GGG | - | chr1_4:75153221-75153240 | None:intergenic | 65.0% | |
TAAGTGCCCTTTGGGCCCGG+AGG | + | chr1_4:75154203-75154222 | Msa0185080:intron | 65.0% | |
TTCGGCTCCGGTCACCACCA+GGG | - | chr1_4:75154233-75154252 | None:intergenic | 65.0% | |
ATTCGGCTCCGGTCACCACC+AGG | - | chr1_4:75154234-75154253 | None:intergenic | 65.0% | |
GGAGGGGCTACACCTAGGCA+TGG | + | chr1_4:75156643-75156662 | Msa0185080:intron | 65.0% | |
CCTAGGCATGGCAATGGGGC+GGG | + | chr1_4:75156655-75156674 | Msa0185080:intron | 65.0% | |
CTAGGCATGGCAATGGGGCG+GGG | + | chr1_4:75156656-75156675 | Msa0185080:intron | 65.0% | |
ATCGGGTATGGGGACGGGGA+AGG | - | chr1_4:75156697-75156716 | None:intergenic | 65.0% | |
ACCTCAACCCCGTCCCCAAC+GGG | + | chr1_4:75156770-75156789 | Msa0185080:intron | 65.0% | |
! | AACCCCGTCCCCAACGGGTT+CGG | + | chr1_4:75156775-75156794 | Msa0185080:intron | 65.0% |
TACCCGAACCCGTTGGGGAC+GGG | - | chr1_4:75156781-75156800 | None:intergenic | 65.0% | |
GGGGATACCCGAACCCGTTG+GGG | - | chr1_4:75156786-75156805 | None:intergenic | 65.0% | |
CGGGGATACCCGAACCCGTT+GGG | - | chr1_4:75156787-75156806 | None:intergenic | 65.0% | |
! | CTGGCTCGCAGGAGAGTCCA+CGG | + | chr1_4:75158395-75158414 | Msa0185080:CDS | 65.0% |
TGGCTCGCAGGAGAGTCCAC+GGG | + | chr1_4:75158396-75158415 | Msa0185080:CDS | 65.0% | |
GCGGTGTGAGACGCCGTGGA+AGG | - | chr1_4:75150124-75150143 | None:intergenic | 70.0% | |
GTGGAGGAGGGAGGGAGGGT+GGG | - | chr1_4:75150150-75150169 | None:intergenic | 70.0% | |
GAGCGTGGAGGAGGGAGGGA+GGG | - | chr1_4:75150154-75150173 | None:intergenic | 70.0% | |
TGAGCGTGGAGGAGGGAGGG+AGG | - | chr1_4:75150155-75150174 | None:intergenic | 70.0% | |
GCGGCGTGGGTGGATCATGG+TGG | - | chr1_4:75150252-75150271 | None:intergenic | 70.0% | |
CGAATGGTTCGCGGCGTGGG+TGG | - | chr1_4:75150262-75150281 | None:intergenic | 70.0% | |
TCTAGCCGAGCCAGGGGAGG+AGG | + | chr1_4:75152076-75152095 | Msa0185080:CDS | 70.0% | |
CTAGCCGAGCCAGGGGAGGA+GGG | + | chr1_4:75152077-75152096 | Msa0185080:CDS | 70.0% | |
TAGCCGAGCCAGGGGAGGAG+GGG | + | chr1_4:75152078-75152097 | Msa0185080:CDS | 70.0% | |
TTCCCCCTCCTCCCCTGGCT+CGG | - | chr1_4:75152084-75152103 | None:intergenic | 70.0% | |
ACGGGAACCGCGGGCATCTC+AGG | - | chr1_4:75153212-75153231 | None:intergenic | 70.0% | |
TCACCACCAGGGCAGGCCTC+CGG | - | chr1_4:75154222-75154241 | None:intergenic | 70.0% | |
! | AGGCCTGCCCTGGTGGTGAC+CGG | + | chr1_4:75154223-75154242 | Msa0185080:intron | 70.0% |
CCCGCCCCATTGCCATGCCT+AGG | - | chr1_4:75156658-75156677 | None:intergenic | 70.0% | |
GCATGGCAATGGGGCGGGGT+GGG | + | chr1_4:75156660-75156679 | Msa0185080:intron | 70.0% | |
CATGGCAATGGGGCGGGGTG+GGG | + | chr1_4:75156661-75156680 | Msa0185080:intron | 70.0% | |
ACCCGTTGGGGACGGGGTTG+AGG | - | chr1_4:75156774-75156793 | None:intergenic | 70.0% | |
! | ACCCCGTCCCCAACGGGTTC+GGG | + | chr1_4:75156776-75156795 | Msa0185080:intron | 70.0% |
ACCCGAACCCGTTGGGGACG+GGG | - | chr1_4:75156780-75156799 | None:intergenic | 70.0% | |
GCGGGGATACCCGAACCCGT+TGG | - | chr1_4:75156788-75156807 | None:intergenic | 70.0% | |
CGTGGAGGAGGGAGGGAGGG+TGG | - | chr1_4:75150151-75150170 | None:intergenic | 75.0% | |
AGCCGAGCCAGGGGAGGAGG+GGG | + | chr1_4:75152079-75152098 | Msa0185080:CDS | 75.0% | |
GAGCCAGGGGAGGAGGGGGA+AGG | + | chr1_4:75152083-75152102 | Msa0185080:CDS | 75.0% | |
TCGCCTTCCCCCTCCTCCCC+TGG | - | chr1_4:75152089-75152108 | None:intergenic | 75.0% | |
GGCAGGCCTCCGGGCCCAAA+GGG | - | chr1_4:75154212-75154231 | None:intergenic | 75.0% | |
CACCACCAGGGCAGGCCTCC+GGG | - | chr1_4:75154221-75154240 | None:intergenic | 75.0% | |
GCTCCGGTCACCACCAGGGC+AGG | - | chr1_4:75154229-75154248 | None:intergenic | 75.0% | |
GGCATGGCAATGGGGCGGGG+TGG | + | chr1_4:75156659-75156678 | Msa0185080:intron | 75.0% | |
GCAATGGGGCGGGGTGGGGA+CGG | + | chr1_4:75156665-75156684 | Msa0185080:intron | 75.0% | |
CAATGGGGCGGGGTGGGGAC+GGG | + | chr1_4:75156666-75156685 | Msa0185080:intron | 75.0% | |
! | GGGCAGGCCTCCGGGCCCAA+AGG | - | chr1_4:75154213-75154232 | None:intergenic | 80.0% |
! | TTGGGCCCGGAGGCCTGCCC+TGG | + | chr1_4:75154213-75154232 | Msa0185080:intron | 80.0% |
! | GGCCCGGAGGCCTGCCCTGG+TGG | + | chr1_4:75154216-75154235 | Msa0185080:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 75150027 | 75160874 | 75150027 | ID=Msa0185080;Name=Msa0185080 |
chr1_4 | mRNA | 75150027 | 75160874 | 75150027 | ID=Msa0185080-mRNA-1;Parent=Msa0185080;Name=Msa0185080-mRNA-1;_AED=0.08;_eAED=0.08;_QI=185|0.66|0.8|0.9|1|1|10|320|629 |
chr1_4 | exon | 75150027 | 75150652 | 75150027 | ID=Msa0185080-mRNA-1:exon:25538;Parent=Msa0185080-mRNA-1 |
chr1_4 | exon | 75151975 | 75152118 | 75151975 | ID=Msa0185080-mRNA-1:exon:25539;Parent=Msa0185080-mRNA-1 |
chr1_4 | exon | 75153101 | 75153478 | 75153101 | ID=Msa0185080-mRNA-1:exon:25540;Parent=Msa0185080-mRNA-1 |
chr1_4 | exon | 75154071 | 75154178 | 75154071 | ID=Msa0185080-mRNA-1:exon:25541;Parent=Msa0185080-mRNA-1 |
chr1_4 | exon | 75155183 | 75155287 | 75155183 | ID=Msa0185080-mRNA-1:exon:25542;Parent=Msa0185080-mRNA-1 |
chr1_4 | exon | 75156436 | 75156576 | 75156436 | ID=Msa0185080-mRNA-1:exon:25543;Parent=Msa0185080-mRNA-1 |
chr1_4 | exon | 75157902 | 75158105 | 75157902 | ID=Msa0185080-mRNA-1:exon:25544;Parent=Msa0185080-mRNA-1 |
chr1_4 | exon | 75158387 | 75158479 | 75158387 | ID=Msa0185080-mRNA-1:exon:25545;Parent=Msa0185080-mRNA-1 |
chr1_4 | exon | 75158567 | 75158746 | 75158567 | ID=Msa0185080-mRNA-1:exon:25546;Parent=Msa0185080-mRNA-1 |
chr1_4 | exon | 75160459 | 75160874 | 75160459 | ID=Msa0185080-mRNA-1:exon:25547;Parent=Msa0185080-mRNA-1 |
chr1_4 | five_prime_UTR | 75150027 | 75150211 | 75150027 | ID=Msa0185080-mRNA-1:five_prime_utr;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75150212 | 75150652 | 75150212 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75151975 | 75152118 | 75151975 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75153101 | 75153478 | 75153101 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75154071 | 75154178 | 75154071 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75155183 | 75155287 | 75155183 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75156436 | 75156576 | 75156436 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75157902 | 75158105 | 75157902 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75158387 | 75158479 | 75158387 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75158567 | 75158746 | 75158567 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | CDS | 75160459 | 75160554 | 75160459 | ID=Msa0185080-mRNA-1:cds;Parent=Msa0185080-mRNA-1 |
chr1_4 | three_prime_UTR | 75160555 | 75160874 | 75160555 | ID=Msa0185080-mRNA-1:three_prime_utr;Parent=Msa0185080-mRNA-1 |
Gene Sequence |
Protein sequence |