AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1208040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1208040 MtrunA17_Chr4g0053251 94.462 325 6 2 1 316 1 322 0.0 625
Msa1208040 MtrunA17_Chr1g0162321 33.651 315 192 10 9 315 76 381 7.94e-44 154
Msa1208040 MtrunA17_Chr1g0162351 33.016 315 194 10 9 315 76 381 3.10e-43 153
Msa1208040 MtrunA17_Chr4g0045411 31.579 323 191 11 7 315 29 335 3.79e-41 146
Msa1208040 MtrunA17_Chr1g0162361 35.069 288 168 9 3 283 22 297 1.08e-40 145
Msa1208040 MtrunA17_Chr7g0239111 29.373 303 194 10 6 306 53 337 4.98e-38 138
Msa1208040 MtrunA17_Chr4g0045441 31.333 300 190 8 22 314 45 335 1.03e-37 137
Msa1208040 MtrunA17_Chr4g0045471 30.841 321 200 11 2 313 28 335 6.14e-37 135
Msa1208040 MtrunA17_Chr6g0486831 34.828 290 156 12 26 295 35 311 6.93e-37 135
Msa1208040 MtrunA17_Chr8g0389941 33.228 316 179 13 19 316 41 342 1.17e-36 134
Msa1208040 MtrunA17_Chr7g0265221 32.759 290 166 10 7 283 66 339 5.03e-36 133
Msa1208040 MtrunA17_Chr5g0423191 32.646 291 171 9 4 289 43 313 5.92e-36 132
Msa1208040 MtrunA17_Chr4g0045431 32.959 267 158 8 15 271 38 293 2.11e-35 131
Msa1208040 MtrunA17_Chr3g0113641 31.379 290 176 8 7 289 49 322 2.57e-35 131
Msa1208040 MtrunA17_Chr4g0064781 31.206 282 164 9 8 285 50 305 8.95e-35 129
Msa1208040 MtrunA17_Chr5g0423251 31.579 285 174 9 2 283 41 307 1.12e-34 129
Msa1208040 MtrunA17_Chr7g0239101 28.053 303 198 8 6 306 53 337 1.12e-34 129
Msa1208040 MtrunA17_Chr7g0239121 28.618 304 196 10 6 306 49 334 1.43e-34 129
Msa1208040 MtrunA17_Chr5g0423201 32.180 289 168 9 2 283 41 308 2.17e-34 128
Msa1208040 MtrunA17_Chr4g0045451 29.154 319 205 9 8 314 26 335 2.71e-34 128
Msa1208040 MtrunA17_Chr5g0437181 32.308 260 157 7 28 283 71 315 3.00e-34 128
Msa1208040 MtrunA17_Chr1g0179801 31.683 303 180 11 7 298 65 351 3.62e-34 128
Msa1208040 MtrunA17_Chr4g0006371 30.968 310 160 13 4 290 58 336 5.89e-34 127
Msa1208040 MtrunA17_Chr3g0128001 32.624 282 167 8 5 283 35 296 6.90e-34 127
Msa1208040 MtrunA17_Chr7g0242551 29.492 295 178 9 7 290 53 328 8.30e-34 127
Msa1208040 MtrunA17_Chr3g0125201 28.664 307 191 10 7 306 2 287 2.22e-32 122
Msa1208040 MtrunA17_Chr3g0126741 33.700 273 152 10 6 270 57 308 3.52e-32 122
Msa1208040 MtrunA17_Chr5g0420981 30.479 292 177 8 4 289 49 320 6.02e-32 122
Msa1208040 MtrunA17_Chr1g0162191 30.208 288 184 8 4 289 43 315 1.24e-31 121
Msa1208040 MtrunA17_Chr7g0239821 27.044 318 182 10 6 306 62 346 1.80e-31 121
Msa1208040 MtrunA17_Chr8g0365241 31.438 299 169 11 2 289 51 324 2.01e-31 120
Msa1208040 MtrunA17_Chr5g0421011 30.645 310 185 11 4 306 43 329 3.33e-31 120
Msa1208040 MtrunA17_Chr8g0375601 29.373 303 195 9 7 306 47 333 1.36e-30 118
Msa1208040 MtrunA17_Chr2g0314401 31.056 322 189 10 8 317 51 351 1.96e-30 117
Msa1208040 MtrunA17_Chr5g0421041 30.208 288 176 9 7 289 44 311 2.37e-30 117
Msa1208040 MtrunA17_Chr7g0239071 27.985 268 175 9 41 306 31 282 3.05e-30 116
Msa1208040 MtrunA17_Chr5g0423221 29.930 284 181 7 2 283 65 332 5.27e-30 117
Msa1208040 MtrunA17_Chr8g0375571 30.492 305 190 9 7 306 44 331 5.32e-30 116
Msa1208040 MtrunA17_Chr8g0370711 29.286 280 182 7 8 285 52 317 5.40e-30 116
Msa1208040 MtrunA17_Chr4g0055911 32.877 292 158 13 7 282 8 277 6.72e-30 115
Msa1208040 MtrunA17_Chr2g0296371 28.754 313 201 11 6 313 48 343 8.31e-30 116
Msa1208040 MtrunA17_Chr3g0145181 30.258 271 156 9 26 285 69 317 9.80e-30 115
Msa1208040 MtrunA17_Chr3g0092531 28.269 283 172 9 29 305 30 287 1.01e-29 115
Msa1208040 MtrunA17_Chr5g0420951 31.488 289 170 8 2 283 47 314 2.40e-29 115
Msa1208040 MtrunA17_Chr3g0145171 28.214 280 185 7 8 285 52 317 4.29e-29 114
Msa1208040 MtrunA17_Chr5g0412681 31.023 303 153 11 3 285 27 293 5.36e-29 114
Msa1208040 MtrunA17_Chr8g0370721 28.723 282 183 8 7 285 51 317 6.72e-29 114
Msa1208040 MtrunA17_Chr7g0232161 29.762 252 158 9 8 257 60 294 9.31e-29 112
Msa1208040 MtrunA17_Chr2g0314391 30.282 284 181 6 8 289 70 338 1.39e-28 113
Msa1208040 MtrunA17_Chr2g0314381 28.772 285 186 6 7 289 76 345 1.76e-28 113
Msa1208040 MtrunA17_Chr7g0220011 30.357 280 172 9 7 283 38 297 2.46e-28 112
Msa1208040 MtrunA17_Chr5g0412651 28.223 287 181 8 7 285 37 306 4.25e-28 111
Msa1208040 MtrunA17_Chr7g0220001 27.707 314 198 9 7 317 40 327 4.52e-28 111
Msa1208040 MtrunA17_Chr5g0421091 31.541 279 153 10 7 273 44 296 4.58e-28 111
Msa1208040 MtrunA17_Chr8g0345831 29.434 265 163 8 24 283 57 302 4.79e-28 111
Msa1208040 MtrunA17_Chr5g0412671 27.719 285 189 9 5 285 35 306 4.90e-28 111
Msa1208040 MtrunA17_Chr3g0145201 29.478 268 162 7 26 285 704 952 5.16e-28 114
Msa1208040 MtrunA17_Chr3g0087031 29.104 268 171 7 7 272 59 309 1.43e-27 110
Msa1208040 MtrunA17_Chr2g0332191 30.070 286 149 11 6 273 50 302 1.49e-27 110
Msa1208040 MtrunA17_Chr5g0420941 31.541 279 160 10 2 272 39 294 1.56e-27 110
Msa1208040 MtrunA17_Chr8g0375671 30.420 286 180 9 8 289 52 322 2.02e-27 110
Msa1208040 MtrunA17_Chr5g0407781 29.562 274 153 9 7 272 4 245 4.29e-27 107
Msa1208040 MtrunA17_Chr4g0055871 29.897 291 163 12 7 282 8 272 7.49e-27 107
Msa1208040 MtrunA17_Chr3g0114861 27.703 296 181 10 25 309 52 325 9.05e-27 107
Msa1208040 MtrunA17_Chr7g0250511 27.046 281 185 8 6 283 47 310 2.26e-26 107
Msa1208040 MtrunA17_Chr8g0375701 30.451 266 156 9 27 283 69 314 6.51e-26 105
Msa1208040 MtrunA17_Chr3g0105281 29.323 266 164 9 29 288 47 294 1.03e-25 104
Msa1208040 MtrunA17_Chr7g0247741 28.269 283 162 9 10 273 1 261 1.30e-25 104
Msa1208040 MtrunA17_Chr3g0093761 30.032 313 175 13 6 306 54 334 2.05e-25 104
Msa1208040 MtrunA17_Chr1g0184161 27.273 308 203 9 6 309 36 326 2.93e-25 103
Msa1208040 MtrunA17_Chr5g0421101 29.078 282 181 8 4 283 43 307 3.14e-25 103
Msa1208040 MtrunA17_Chr1g0148771 31.560 282 165 10 6 283 61 318 3.61e-25 103
Msa1208040 MtrunA17_Chr5g0424201 27.597 308 187 10 8 302 44 328 4.19e-25 103
Msa1208040 MtrunA17_Chr5g0420901 27.575 301 177 9 2 289 40 312 4.87e-25 103
Msa1208040 MtrunA17_Chr6g0455481 28.077 260 173 5 25 283 55 301 4.94e-25 102
Msa1208040 MtrunA17_Chr1g0184101 28.929 280 180 8 6 283 36 298 6.18e-25 102
Msa1208040 MtrunA17_Chr5g0426891 30.556 288 163 12 8 283 39 301 8.88e-25 102
Msa1208040 MtrunA17_Chr5g0398291 32.143 252 152 8 28 274 69 306 9.17e-25 102
Msa1208040 MtrunA17_Chr4g0045461 27.393 303 199 10 21 314 44 334 1.08e-24 102
Msa1208040 MtrunA17_Chr7g0265351 31.068 309 178 13 6 306 37 318 5.47e-24 100
Msa1208040 MtrunA17_Chr8g0348951 27.338 278 164 8 8 273 10 261 6.22e-24 99.8
Msa1208040 MtrunA17_Chr1g0184121 27.742 310 200 9 7 314 36 323 6.59e-24 100
Msa1208040 MtrunA17_Chr2g0313111 26.380 326 194 11 6 314 26 322 6.63e-24 99.8
Msa1208040 MtrunA17_Chr3g0102041 31.086 267 162 10 23 284 55 304 6.87e-24 100
Msa1208040 MtrunA17_Chr2g0311631 29.431 299 178 11 25 314 71 345 7.48e-24 100
Msa1208040 MtrunA17_Chr2g0311761 30.325 277 168 7 8 279 68 324 7.75e-24 100
Msa1208040 MtrunA17_Chr1g0194321 27.797 295 175 8 31 304 38 315 1.11e-23 99.4
Msa1208040 MtrunA17_Chr1g0187821 26.959 319 192 9 7 314 66 354 1.21e-23 99.8
Msa1208040 MtrunA17_Chr3g0093741 31.250 288 156 13 6 281 54 311 1.37e-23 99.4
Msa1208040 MtrunA17_Chr3g0093751 29.393 313 178 14 6 306 54 335 1.39e-23 99.4
Msa1208040 MtrunA17_Chr8g0375681 31.020 245 146 7 44 283 18 244 1.67e-23 97.8
Msa1208040 MtrunA17_Chr3g0109041 29.167 288 186 12 25 306 58 333 1.86e-23 99.0
Msa1208040 MtrunA17_Chr6g0472861 29.487 312 193 11 7 314 69 357 2.58e-23 99.0
Msa1208040 MtrunA17_Chr1g0184151 26.332 319 208 10 6 314 36 337 3.54e-23 97.8
Msa1208040 MtrunA17_Chr5g0423211 29.371 286 162 9 2 273 41 300 4.24e-23 97.8
Msa1208040 MtrunA17_Chr5g0439011 26.515 264 169 8 24 283 20 262 6.98e-23 96.7
Msa1208040 MtrunA17_Chr5g0405411 28.358 268 166 10 24 284 56 304 7.39e-23 97.4
Msa1208040 MtrunA17_Chr8g0371921 29.021 286 183 11 4 284 34 304 1.06e-22 97.1
Msa1208040 MtrunA17_Chr8g0371931 29.478 268 163 9 24 284 56 304 1.82e-22 96.3
Msa1208040 MtrunA17_Chr2g0311921 27.536 276 177 7 8 279 54 310 1.99e-22 95.9
Msa1208040 MtrunA17_Chr3g0121141 26.038 265 173 9 25 286 20 264 2.59e-22 95.1
Msa1208040 MtrunA17_Chr1g0184111 28.674 279 181 8 7 283 36 298 2.61e-22 95.5
Msa1208040 MtrunA17_Chr2g0289341 26.042 288 183 10 5 286 1 264 4.61e-22 94.4
Msa1208040 MtrunA17_Chr1g0204181 28.239 301 187 11 8 294 59 344 4.74e-22 95.1
Msa1208040 MtrunA17_Chr5g0420721 31.839 223 131 7 65 283 4 209 5.06e-22 93.2
Msa1208040 MtrunA17_Chr2g0285931 25.581 301 171 10 5 284 25 293 5.12e-22 94.7
Msa1208040 MtrunA17_Chr8g0358941 26.645 304 163 11 6 284 25 293 1.23e-21 93.6
Msa1208040 MtrunA17_Chr5g0407731 27.707 314 186 11 8 313 33 313 1.82e-21 93.2
Msa1208040 MtrunA17_Chr1g0187831 28.114 281 158 9 7 273 69 319 2.23e-21 93.6
Msa1208040 MtrunA17_Chr2g0311701 28.522 291 162 12 7 282 68 327 2.53e-21 93.2
Msa1208040 MtrunA17_Chr8g0336851 28.417 278 174 10 8 280 60 317 3.43e-21 92.8
Msa1208040 MtrunA17_Chr4g0068891 28.028 289 180 10 24 302 31 301 3.85e-21 92.0
Msa1208040 MtrunA17_Chr1g0187811 26.071 280 163 9 8 273 188 437 4.04e-21 93.6
Msa1208040 MtrunA17_Chr3g0114871 28.000 250 154 11 8 251 42 271 1.01e-20 90.1
Msa1208040 MtrunA17_Chr8g0336761 28.571 273 170 10 8 275 60 312 1.03e-20 91.3
Msa1208040 MtrunA17_Chr2g0311691 27.622 286 171 10 7 282 62 321 1.53e-20 90.9
Msa1208040 MtrunA17_Chr8g0351101 28.114 281 169 8 16 283 63 323 2.56e-20 90.1
Msa1208040 MtrunA17_Chr8g0336861 27.719 285 168 10 8 280 60 318 3.16e-20 90.1
Msa1208040 MtrunA17_Chr8g0336781 26.165 279 182 8 7 280 94 353 3.42e-20 90.1
Msa1208040 MtrunA17_Chr6g0474391 28.522 291 173 12 8 283 64 334 7.31e-20 89.0
Msa1208040 MtrunA17_Chr7g0239091 24.752 303 198 9 6 306 158 432 9.52e-20 89.4
Msa1208040 MtrunA17_Chr8g0364471 28.920 287 158 14 7 278 66 321 1.11e-19 88.6
Msa1208040 MtrunA17_Chr8g0348081 28.826 281 174 11 1 275 52 312 1.33e-19 88.2
Msa1208040 MtrunA17_Chr1g0191201 29.010 293 180 9 24 306 71 345 1.38e-19 88.2
Msa1208040 MtrunA17_Chr7g0225881 30.000 270 163 10 8 273 67 314 1.45e-19 88.2
Msa1208040 MtrunA17_Chr8g0336751 27.586 290 188 8 8 294 94 364 1.54e-19 88.2
Msa1208040 MtrunA17_Chr3g0130391 27.397 292 173 10 9 283 67 336 2.51e-19 87.4
Msa1208040 MtrunA17_Chr8g0336631 28.832 274 169 11 8 275 60 313 3.10e-19 87.0
Msa1208040 MtrunA17_Chr2g0311681 27.586 290 166 11 7 282 62 321 3.34e-19 87.0
Msa1208040 MtrunA17_Chr5g0424211 26.408 284 181 12 8 283 42 305 3.77e-19 86.7
Msa1208040 MtrunA17_Chr2g0311831 27.178 287 163 10 8 279 68 323 1.77e-18 85.1
Msa1208040 MtrunA17_Chr3g0125421 26.207 290 186 8 18 297 48 319 2.03e-18 84.7
Msa1208040 MtrunA17_Chr2g0319491 25.704 284 183 8 8 286 33 293 2.61e-18 84.0
Msa1208040 MtrunA17_Chr8g0384481 28.723 282 185 9 8 285 59 328 3.16e-18 84.3
Msa1208040 MtrunA17_Chr4g0075471 39.048 105 61 2 181 283 28 131 3.50e-18 80.5
Msa1208040 MtrunA17_Chr2g0311711 27.817 284 161 11 7 276 66 319 7.84e-18 83.2
Msa1208040 MtrunA17_Chr6g0488511 25.979 281 184 9 7 283 2 262 8.44e-18 82.4
Msa1208040 MtrunA17_Chr1g0161041 28.664 307 177 12 25 314 111 392 1.20e-17 82.8
Msa1208040 MtrunA17_Chr4g0052251 25.974 308 194 11 5 304 26 307 1.24e-17 82.0
Msa1208040 MtrunA17_Chr3g0092581 30.935 139 92 3 167 305 25 159 2.34e-17 78.6
Msa1208040 MtrunA17_Chr8g0354261 28.777 278 170 10 7 277 67 323 4.01e-17 81.3
Msa1208040 MtrunA17_Chr1g0167911 28.413 271 171 9 8 275 54 304 4.04e-17 80.9
Msa1208040 MtrunA17_Chr8g0384461 25.641 273 182 9 7 272 46 304 6.78e-17 80.5
Msa1208040 MtrunA17_Chr7g0235951 26.545 275 180 7 7 278 66 321 7.07e-17 80.5
Msa1208040 MtrunA17_Chr7g0266651 28.623 276 163 11 6 272 57 307 8.28e-17 80.1
Msa1208040 MtrunA17_Chr4g0004061 27.273 275 168 10 8 272 9 261 2.72e-16 78.2
Msa1208040 MtrunA17_Chr4g0004071 26.471 272 173 8 8 272 9 260 3.67e-16 77.8
Msa1208040 MtrunA17_Chr4g0064771 31.183 186 110 5 101 284 6 175 6.37e-16 75.1
Msa1208040 MtrunA17_Chr4g0050031 25.573 262 174 7 25 283 81 324 7.32e-16 77.4
Msa1208040 MtrunA17_Chr7g0256741 27.386 241 135 10 43 272 52 263 7.83e-16 77.0
Msa1208040 MtrunA17_Chr4g0055591 25.846 325 191 11 4 314 57 345 1.13e-15 76.6
Msa1208040 MtrunA17_Chr5g0420881 36.449 107 65 2 185 289 4 109 1.27e-15 72.8
Msa1208040 MtrunA17_Chr7g0247991 27.778 288 160 8 7 278 66 321 3.52e-15 75.5
Msa1208040 MtrunA17_Chr5g0394071 33.094 139 88 4 146 282 12 147 9.07e-15 71.6
Msa1208040 MtrunA17_Chr7g0233661 37.143 105 62 3 180 282 19 121 1.32e-14 70.5
Msa1208040 MtrunA17_Chr2g0293931 37.634 93 57 1 189 281 70 161 1.86e-14 71.2
Msa1208040 MtrunA17_Chr1g0170631 28.671 143 96 4 143 282 10 149 2.71e-14 70.5
Msa1208040 MtrunA17_Chr8g0335411 26.354 277 168 10 7 273 66 316 2.95e-14 72.8
Msa1208040 MtrunA17_Chr3g0126761 34.266 143 89 4 144 283 52 192 4.66e-14 70.5
Msa1208040 MtrunA17_Chr2g0311861 25.279 269 159 8 8 273 64 293 7.47e-14 71.2
Msa1208040 MtrunA17_Chr4g0009541 24.444 270 181 11 8 270 7 260 9.89e-14 70.9
Msa1208040 MtrunA17_Chr1g0161111 39.695 131 68 5 193 314 300 428 9.99e-14 71.2
Msa1208040 MtrunA17_Chr7g0235981 26.800 250 159 9 41 287 56 284 1.17e-13 70.5
Msa1208040 MtrunA17_Chr8g0336801 34.400 125 77 3 193 317 24 143 2.61e-13 66.6
Msa1208040 MtrunA17_Chr4g0066991 28.467 274 146 12 7 273 66 296 3.03e-13 69.7
Msa1208040 MtrunA17_Chr3g0138351 25.000 268 170 10 24 282 29 274 3.59e-13 68.9
Msa1208040 MtrunA17_Chr1g0161081 38.931 131 69 5 193 314 241 369 7.02e-13 68.6
Msa1208040 MtrunA17_Chr4g0037611 31.169 154 96 6 152 298 6 156 8.94e-13 65.9
Msa1208040 MtrunA17_Chr1g0167931 26.337 243 143 11 88 306 70 300 1.47e-12 67.4
Msa1208040 MtrunA17_Chr4g0011311 28.049 246 147 11 7 245 66 288 6.71e-12 65.1
Msa1208040 MtrunA17_Chr1g0158011 34.839 155 87 5 141 283 68 220 1.76e-11 63.5
Msa1208040 MtrunA17_Chr7g0236011 26.298 289 153 13 7 273 66 316 7.99e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1208040 AT3G50210.4 67.568 333 86 4 1 314 1 330 6.45e-165 462
Msa1208040 AT3G50210.1 67.568 333 86 4 1 314 1 330 6.45e-165 462
Msa1208040 AT3G50210.3 67.568 333 86 4 1 314 1 330 6.45e-165 462
Msa1208040 AT3G49630.1 63.110 328 104 5 1 314 1 325 6.52e-152 429
Msa1208040 AT3G49630.3 65.147 307 100 3 12 314 18 321 3.04e-150 425
Msa1208040 AT3G49620.1 60.909 330 112 5 1 316 26 352 2.54e-146 416
Msa1208040 AT3G50210.2 70.238 252 62 3 74 315 1 249 2.46e-129 369
Msa1208040 AT3G49630.2 66.527 239 73 3 80 314 17 252 4.15e-117 338
Msa1208040 AT3G19010.1 32.278 316 198 10 6 314 26 332 1.82e-38 139
Msa1208040 AT3G19010.4 32.278 316 198 10 6 314 26 332 1.82e-38 139
Msa1208040 AT5G05600.1 31.488 289 179 7 2 285 56 330 1.78e-35 132
Msa1208040 AT2G38240.1 31.488 289 171 8 8 289 48 316 8.30e-35 130
Msa1208040 AT1G17010.1 30.822 292 186 5 6 295 52 329 1.05e-34 130
Msa1208040 AT1G35190.1 33.113 302 176 12 2 289 6 295 2.82e-34 128
Msa1208040 AT2G36690.2 31.338 284 165 10 8 283 61 322 3.37e-34 128
Msa1208040 AT2G36690.1 31.338 284 165 10 8 283 61 322 3.37e-34 128
Msa1208040 AT3G55970.1 29.730 296 177 8 6 289 50 326 1.63e-33 126
Msa1208040 AT3G46500.5 31.715 309 176 14 2 295 11 299 1.95e-33 125
Msa1208040 AT1G35190.2 32.119 302 158 11 2 290 6 273 8.18e-33 123
Msa1208040 AT1G17020.1 31.126 302 188 8 8 305 53 338 8.89e-33 124
Msa1208040 AT4G10490.1 28.975 283 174 9 7 283 41 302 9.58e-32 121
Msa1208040 AT3G19010.3 29.114 316 178 9 6 314 26 302 1.38e-31 120
Msa1208040 AT3G19000.1 31.142 289 175 10 8 284 32 308 1.47e-31 121
Msa1208040 AT3G21420.1 30.175 285 177 11 7 285 54 322 1.55e-31 121
Msa1208040 AT4G25300.1 29.514 288 185 6 6 290 50 322 3.99e-31 120
Msa1208040 AT3G46490.1 32.581 310 171 15 3 292 12 303 5.31e-31 119
Msa1208040 AT3G46500.7 31.930 285 159 14 2 270 11 276 1.19e-30 117
Msa1208040 AT3G60290.1 27.333 300 194 9 7 304 51 328 1.85e-30 118
Msa1208040 AT3G11180.2 30.420 286 180 7 7 289 94 363 5.21e-30 118
Msa1208040 AT3G11180.1 30.420 286 180 7 7 289 94 363 6.31e-30 117
Msa1208040 AT4G10500.1 28.622 283 175 11 7 283 43 304 2.11e-29 115
Msa1208040 AT1G78550.1 28.966 290 183 6 6 290 51 322 3.56e-29 115
Msa1208040 AT5G24530.1 28.571 280 168 8 9 272 22 285 5.63e-29 114
Msa1208040 AT3G46490.2 32.997 297 159 15 3 277 12 290 7.28e-29 113
Msa1208040 AT4G25310.1 30.690 290 182 7 6 293 50 322 2.72e-28 112
Msa1208040 AT3G13610.1 30.671 313 176 11 7 308 61 343 4.08e-28 112
Msa1208040 AT1G55290.1 29.861 288 165 10 7 284 61 321 6.38e-28 111
Msa1208040 AT1G77330.1 28.339 307 191 12 7 306 2 286 7.88e-28 110
Msa1208040 AT5G51810.1 28.289 304 172 9 7 290 62 339 1.15e-27 111
Msa1208040 AT3G19010.2 33.198 247 150 9 6 245 26 264 1.22e-27 109
Msa1208040 AT4G25420.1 30.175 285 175 10 8 283 61 330 2.16e-27 110
Msa1208040 AT1G15550.1 28.840 319 187 14 7 314 56 345 4.06e-27 109
Msa1208040 AT1G78440.1 30.000 290 171 9 5 284 15 282 6.18e-27 108
Msa1208040 AT2G44800.1 27.208 283 182 9 6 283 50 313 8.80e-27 108
Msa1208040 AT5G20400.1 31.250 288 179 10 2 285 39 311 2.47e-26 107
Msa1208040 AT4G22880.1 29.739 306 189 12 12 311 58 343 2.64e-26 107
Msa1208040 AT4G22880.2 29.739 306 189 12 12 311 58 343 2.64e-26 107
Msa1208040 AT4G22880.3 29.739 306 189 12 12 311 58 343 2.64e-26 107
Msa1208040 AT1G47990.1 27.673 318 177 11 8 305 15 299 3.18e-26 106
Msa1208040 AT5G07480.1 27.402 281 185 7 4 278 40 307 3.87e-26 106
Msa1208040 AT5G63600.1 29.126 309 186 12 8 310 33 314 8.05e-26 105
Msa1208040 AT5G63600.2 28.990 307 190 12 8 310 33 315 1.68e-25 104
Msa1208040 AT1G62380.1 25.614 285 186 8 25 306 23 284 3.62e-25 103
Msa1208040 AT5G54000.2 27.099 262 175 6 26 285 65 312 6.43e-25 103
Msa1208040 AT1G80340.1 28.929 280 154 9 23 284 58 310 8.28e-25 102
Msa1208040 AT1G12010.1 26.045 311 185 11 8 306 7 284 1.24e-24 102
Msa1208040 AT3G46480.1 32.099 243 134 11 58 292 37 256 2.17e-24 100
Msa1208040 AT5G08640.2 29.433 282 177 8 7 284 42 305 9.47e-24 99.8
Msa1208040 AT5G08640.1 29.433 282 177 8 7 284 42 305 9.47e-24 99.8
Msa1208040 AT1G60980.1 28.000 300 168 11 7 283 56 330 9.84e-24 100
Msa1208040 AT1G49390.1 29.231 260 168 7 26 283 64 309 1.18e-23 99.8
Msa1208040 AT4G25310.2 28.819 288 162 8 6 293 50 294 1.39e-23 99.0
Msa1208040 AT5G54000.1 27.347 245 162 6 43 285 2 232 1.87e-23 97.8
Msa1208040 AT4G16765.3 40.571 175 88 9 123 286 48 217 1.92e-23 97.1
Msa1208040 AT4G16765.6 40.571 175 88 9 123 286 48 217 2.10e-23 97.1
Msa1208040 AT4G16765.1 40.571 175 88 9 123 286 48 217 2.10e-23 97.1
Msa1208040 AT4G16765.2 40.571 175 88 9 123 286 48 217 2.10e-23 97.1
Msa1208040 AT3G12900.1 29.766 299 181 9 20 314 67 340 4.26e-23 98.2
Msa1208040 AT3G51240.1 29.545 264 168 8 24 284 55 303 4.31e-23 98.2
Msa1208040 AT3G19000.2 29.600 250 152 10 8 245 32 269 7.74e-23 96.3
Msa1208040 AT4G16330.2 25.180 278 188 9 32 306 85 345 1.43e-22 97.1
Msa1208040 AT1G49390.2 29.630 243 155 7 43 283 2 230 1.71e-22 95.1
Msa1208040 AT3G55970.2 28.175 252 150 8 6 245 50 282 2.54e-22 95.1
Msa1208040 AT5G12270.1 29.545 308 189 10 6 306 54 340 3.90e-22 95.5
Msa1208040 AT5G05600.2 28.514 249 159 7 2 245 56 290 5.25e-22 94.4
Msa1208040 AT4G21690.1 27.687 307 174 13 29 314 61 340 8.29e-22 94.7
Msa1208040 AT1G80330.1 26.712 292 165 12 2 273 39 301 2.10e-21 93.6
Msa1208040 AT1G78550.2 28.063 253 159 6 43 290 10 244 2.82e-21 92.0
Msa1208040 AT3G46500.4 35.329 167 91 7 137 295 6 163 2.87e-21 89.7
Msa1208040 AT1G30040.1 26.132 287 179 10 7 284 30 292 3.89e-21 92.4
Msa1208040 AT3G46500.10 35.106 188 97 10 123 295 48 225 6.03e-21 90.5
Msa1208040 AT3G46500.1 35.106 188 97 10 123 295 48 225 6.03e-21 90.5
Msa1208040 AT5G63590.1 28.105 306 190 8 8 305 14 297 1.63e-20 90.5
Msa1208040 AT1G05010.1 26.846 298 163 10 5 283 1 262 1.69e-20 90.5
Msa1208040 AT4G23340.1 26.224 286 156 11 7 272 9 259 2.31e-20 90.1
Msa1208040 AT2G34555.1 25.926 297 171 8 13 285 17 288 4.71e-20 89.4
Msa1208040 AT3G47190.1 26.855 283 160 12 8 272 32 285 8.27e-20 88.6
Msa1208040 AT5G07200.1 28.296 311 178 12 8 299 58 342 1.09e-19 89.0
Msa1208040 AT5G58660.1 27.333 300 180 13 7 285 33 315 1.17e-19 88.6
Msa1208040 AT5G20550.1 27.491 291 184 10 6 285 38 312 1.32e-19 88.6
Msa1208040 AT5G43935.1 28.076 317 178 13 8 316 19 293 1.34e-19 87.4
Msa1208040 AT2G19590.1 28.214 280 174 11 8 283 11 267 2.20e-19 87.4
Msa1208040 AT4G16770.1 29.508 244 143 11 8 238 22 249 2.26e-19 86.3
Msa1208040 AT1G50960.1 25.556 270 175 9 8 272 40 288 6.21e-19 86.3
Msa1208040 AT5G51310.1 27.208 283 166 9 8 273 5 264 2.19e-18 84.7
Msa1208040 AT3G61400.1 29.528 254 159 6 25 275 83 319 2.42e-18 85.1
Msa1208040 AT3G46500.6 36.364 143 74 7 137 270 37 171 2.85e-18 81.6
Msa1208040 AT3G46500.8 36.364 143 74 7 137 270 37 171 2.85e-18 81.6
Msa1208040 AT5G63595.1 29.008 262 144 11 25 281 38 262 2.91e-18 83.6
Msa1208040 AT3G46500.3 35.976 164 80 10 123 270 48 202 4.32e-18 82.0
Msa1208040 AT4G25300.2 32.653 147 96 2 146 290 83 228 5.41e-18 82.4
Msa1208040 AT1G03410.2 29.804 255 156 9 25 275 75 310 7.01e-18 83.6
Msa1208040 AT4G21200.1 25.969 258 162 9 29 282 65 297 8.84e-18 83.2
Msa1208040 AT1G03410.1 29.804 255 156 9 25 275 112 347 1.44e-17 83.2
Msa1208040 AT3G51240.2 29.870 231 144 8 57 284 4 219 2.40e-17 80.9
Msa1208040 AT1G02400.1 29.213 267 156 11 31 284 43 289 2.59e-17 81.6
Msa1208040 AT2G30840.1 26.378 254 161 8 25 273 77 309 5.40e-17 80.9
Msa1208040 AT5G59530.1 27.698 278 170 12 8 276 58 313 5.75e-17 80.9
Msa1208040 AT5G07480.2 30.189 159 103 3 125 278 43 198 8.46e-17 79.0
Msa1208040 AT5G43440.1 27.206 272 176 6 7 275 61 313 9.07e-17 80.5
Msa1208040 AT4G16330.1 25.269 186 126 5 123 306 65 239 1.15e-16 78.6
Msa1208040 AT1G06620.1 27.574 272 175 8 7 275 61 313 2.02e-16 79.3
Msa1208040 AT5G43450.1 27.132 258 161 8 25 277 77 312 2.89e-16 79.0
Msa1208040 AT1G03400.1 29.885 261 155 11 25 279 66 304 3.27e-16 78.6
Msa1208040 AT1G06650.2 27.734 256 161 9 24 275 82 317 7.39e-16 77.8
Msa1208040 AT4G16765.4 39.007 141 71 8 123 252 48 184 8.00e-16 74.7
Msa1208040 AT1G44090.1 26.718 262 170 9 29 283 86 332 1.91e-15 76.6
Msa1208040 AT2G25450.1 26.545 275 181 8 8 279 55 311 5.46e-15 75.1
Msa1208040 AT1G06640.1 27.626 257 162 8 24 276 82 318 8.67e-15 74.7
Msa1208040 AT1G14130.1 25.795 283 174 11 8 283 9 262 1.06e-14 73.9
Msa1208040 AT4G16765.5 43.810 105 51 5 188 286 69 171 1.43e-14 71.6
Msa1208040 AT1G14120.2 25.292 257 170 7 28 282 24 260 2.11e-14 73.2
Msa1208040 AT1G14120.1 25.292 257 170 7 28 282 24 260 2.11e-14 73.2
Msa1208040 AT1G14120.3 25.292 257 170 7 28 282 24 260 2.11e-14 73.2
Msa1208040 AT2G19590.2 27.711 249 154 10 39 283 26 252 2.12e-14 72.8
Msa1208040 AT1G06645.1 25.263 285 172 10 3 275 72 327 3.45e-14 72.8
Msa1208040 AT2G30840.3 26.190 252 158 9 25 273 77 303 4.13e-14 72.4
Msa1208040 AT1G04380.1 24.390 287 168 11 7 278 44 296 2.00e-13 70.5
Msa1208040 AT1G52820.2 25.328 229 135 8 27 245 34 236 5.01e-13 68.6
Msa1208040 AT3G46500.9 30.939 181 90 8 123 295 48 201 1.08e-12 67.0
Msa1208040 AT4G23340.2 40.506 79 46 1 194 272 64 141 1.56e-12 66.2
Msa1208040 AT3G46500.2 33.793 145 72 9 123 252 48 183 6.15e-12 63.9
Msa1208040 AT5G43440.2 26.639 244 157 6 7 247 61 285 6.23e-12 65.5
Msa1208040 AT1G30040.2 25.403 248 152 10 7 245 30 253 7.46e-12 65.1
Msa1208040 AT3G61400.2 27.354 223 143 5 25 245 83 288 2.31e-11 63.9
Msa1208040 AT4G22870.1 37.778 90 54 2 223 311 11 99 3.66e-11 60.1
Msa1208040 AT2G30840.2 25.000 224 143 7 25 244 77 279 7.20e-11 62.4

Find 92 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGTTGAATTACCAATTA+TGG 0.159412 8_1:+65921784 None:intergenic
ATCGAGCTGGTGATCCATTT+TGG 0.187456 8_1:-65919701 Msa1208040:CDS
TCCAAAGTTCAAATTTCTTA+TGG 0.205262 8_1:-65919906 Msa1208040:CDS
AAAATTATTCTTAGTATATC+TGG 0.238887 8_1:+65918622 None:intergenic
TTTAGCTCCATCCCCATAAT+TGG 0.246477 8_1:-65921797 Msa1208040:intron
ATTCCTGACAGTCTTCTTAA+AGG 0.272850 8_1:-65920834 Msa1208040:CDS
ATATCGGCACCTCCGGTTCC+TGG 0.290724 8_1:-65919122 Msa1208040:CDS
ACATACAAAACAAGGATAAA+TGG 0.290833 8_1:-65918790 Msa1208040:CDS
ATTATACGCATCACCCAAAA+TGG 0.291912 8_1:+65919687 None:intergenic
CGCGGAATTGCTTTAGCATT+AGG 0.304876 8_1:-65919750 Msa1208040:CDS
ATCAAAATGACTCCGGCTAA+TGG 0.337068 8_1:-65920756 Msa1208040:CDS
AGTGGAGCTCACACAGATTA+TGG 0.343388 8_1:-65919488 Msa1208040:intron
TCCATAAGAAATTTGAACTT+TGG 0.346067 8_1:+65919905 None:intergenic
AGAGTTGAATTACCAATTAT+GGG 0.354733 8_1:+65921785 None:intergenic
CCGATATCCACTTGCCAGAT+AGG 0.355337 8_1:+65919138 None:intergenic
TGACTCCGGCTAATGGCTTC+AGG 0.358910 8_1:-65920749 Msa1208040:intron
TCAATAGCTTCATGCATATC+AGG 0.364975 8_1:+65920572 None:intergenic
TTTCCTTTAACAGTGTTATA+GGG 0.365517 8_1:-65920357 Msa1208040:intron
TGATGATATAAATGCACTTC+AGG 0.370818 8_1:-65919357 Msa1208040:intron
ACTTGATGTTGTTGCACAAT+TGG 0.405285 8_1:-65921458 Msa1208040:CDS
GATAAGGCTTGCACAGAAGC+AGG 0.409484 8_1:-65921436 Msa1208040:CDS
CCTATCTGGCAAGTGGATAT+CGG 0.421122 8_1:-65919138 Msa1208040:CDS
ATAAGAAATTTGAACTTTGG+AGG 0.422414 8_1:+65919908 None:intergenic
GTGTTATAGGGAAGTGACTA+AGG 0.437669 8_1:-65920345 Msa1208040:CDS
CACACAAATGTCCCAGGAAC+CGG 0.442319 8_1:+65919110 None:intergenic
GAAGTGACTAAGGGCATGTA+TGG 0.442857 8_1:-65920335 Msa1208040:CDS
AAGGGCATGTATGGAGATCT+TGG 0.449412 8_1:-65920326 Msa1208040:CDS
TGGAGATCTTGGCAAAGTTA+TGG 0.454198 8_1:-65920315 Msa1208040:CDS
GTATGAGTCAACTTTGCATC+GGG 0.461487 8_1:-65918977 Msa1208040:CDS
TTGCAGGTAAGAAACCTATC+TGG 0.469404 8_1:-65919152 Msa1208040:intron
CGAACTTCCGTATGAAGAAA+AGG 0.474803 8_1:-65920784 Msa1208040:CDS
TATCGGCACCTCCGGTTCCT+GGG 0.475901 8_1:-65919121 Msa1208040:CDS
TGCAGAGGATATGAGAAGAT+TGG 0.476130 8_1:-65920617 Msa1208040:intron
TTTAAACTGAAAGTGTTCTC+AGG 0.476174 8_1:+65918537 None:intergenic
TGTTGTTGCACAATTGGATA+AGG 0.483147 8_1:-65921452 Msa1208040:CDS
TATTCTTAGTATATCTGGAC+AGG 0.491121 8_1:+65918627 None:intergenic
GACTAGATGCTCTCCGTAGA+CGG 0.497319 8_1:+65918747 None:intergenic
CAAGTGGATATCGGCACCTC+CGG 0.499640 8_1:-65919129 Msa1208040:CDS
GACACTTATTTAGGAGGAGA+AGG 0.504629 8_1:+65921962 None:intergenic
CAACATTGGTGACATGCTTA+AGG 0.508586 8_1:-65919087 Msa1208040:intron
TGTATGAGTCAACTTTGCAT+CGG 0.513021 8_1:-65918978 Msa1208040:CDS
ACTCCTTTAAGAAGACTGTC+AGG 0.515238 8_1:+65920831 None:intergenic
TGAATTACCAATTATGGGGA+TGG 0.522732 8_1:+65921790 None:intergenic
AAAGTTCAAATTTCTTATGG+AGG 0.526703 8_1:-65919903 Msa1208040:CDS
GTGCATTTATATCATCATCC+TGG 0.527760 8_1:+65919363 None:intergenic
GGGACATTTGTGTGCAACAT+TGG 0.531747 8_1:-65919101 Msa1208040:CDS
TTACCATCCAATGTCATCAC+TGG 0.531765 8_1:+65919647 None:intergenic
GTATATCTGGACAGGCAAGC+AGG 0.533797 8_1:+65918635 None:intergenic
TTCAGTTTAAAGACTAGACA+TGG 0.537210 8_1:-65918525 Msa1208040:three_prime_UTR
GTGGTGATTATGATAATCTC+TGG 0.542601 8_1:+65921837 None:intergenic
TGATTATGATAATCTCTGGC+TGG 0.547668 8_1:+65921841 None:intergenic
TAAAACCTGAAGCCATTAGC+CGG 0.549534 8_1:+65920744 None:intergenic
GGATCACCATACGAATTTGA+AGG 0.564132 8_1:-65919726 Msa1208040:CDS
CGGAGAGCATCTAGTCAAGA+AGG 0.566242 8_1:-65918740 Msa1208040:CDS
CGATCACCTTCAAATTCGTA+TGG 0.572036 8_1:+65919720 None:intergenic
TTTATTGACATTGTTGAACC+AGG 0.574671 8_1:-65919381 Msa1208040:CDS
CGTTGAATACATACAAAACA+AGG 0.577717 8_1:-65918798 Msa1208040:CDS
TAAGAAACCTATCTGGCAAG+TGG 0.585807 8_1:-65919145 Msa1208040:CDS
AAGTTTGAAAGAGCCGTCTA+CGG 0.588372 8_1:-65918760 Msa1208040:CDS
ATTGGAGAAAATATAACTGA+AGG 0.589679 8_1:-65920599 Msa1208040:CDS
GCAACAACATCAAGTACAGC+AGG 0.590013 8_1:+65921466 None:intergenic
GGAATTGCTTTAGCATTAGG+TGG 0.590395 8_1:-65919747 Msa1208040:CDS
GGAGCTAAAGTTTACAGCCA+TGG 0.594896 8_1:+65921811 None:intergenic
GGCGAAGATCAAAATGACTC+CGG 0.597165 8_1:-65920763 Msa1208040:CDS
GAATTTGAAGGTGATCGAGC+TGG 0.606778 8_1:-65919714 Msa1208040:CDS
ATCATAATCACCACCTACCA+TGG 0.606886 8_1:-65921828 Msa1208040:exon
TTCTATAGAAGCTAGTTGAG+TGG 0.607129 8_1:+65921865 None:intergenic
ATGTCATCACTGGATACACC+AGG 0.608253 8_1:+65919657 None:intergenic
TATCCAGTGATGACATTGGA+TGG 0.610242 8_1:-65919650 Msa1208040:intron
ATGTTGCACACAAATGTCCC+AGG 0.612684 8_1:+65919104 None:intergenic
ATAAGGCTTGCACAGAAGCA+GGG 0.612988 8_1:-65921435 Msa1208040:CDS
CTAAAGTTTACAGCCATGGT+AGG 0.620196 8_1:+65921815 None:intergenic
CTTGATTGACAGAAAGGCCA+CGG 0.620284 8_1:-65920858 Msa1208040:intron
CAGTTTAAAGACTAGACATG+GGG 0.626839 8_1:-65918523 Msa1208040:three_prime_UTR
ACAGACAAACTTTGATGCTG+CGG 0.629482 8_1:-65918827 Msa1208040:intron
TCAGTTTAAAGACTAGACAT+GGG 0.630108 8_1:-65918524 Msa1208040:three_prime_UTR
GATCTTGGCAAAGTTATGGA+AGG 0.631448 8_1:-65920311 Msa1208040:CDS
GAATATATTAGCCTCTGCAA+AGG 0.633256 8_1:-65919881 Msa1208040:CDS
AGTTGACTCATACAAACCGT+TGG 0.635092 8_1:+65918987 None:intergenic
AAGTTTACAGCCATGGTAGG+TGG 0.635511 8_1:+65921818 None:intergenic
GAGTTGAATTACCAATTATG+GGG 0.643400 8_1:+65921786 None:intergenic
TGTTATAGGGAAGTGACTAA+GGG 0.648828 8_1:-65920344 Msa1208040:CDS
GAGAAAACATGCCTTTGCAG+AGG 0.664439 8_1:+65919870 None:intergenic
GGTGTATCCAGTGATGACAT+TGG 0.665404 8_1:-65919654 Msa1208040:CDS
ACAAATGTCCCAGGAACCGG+AGG 0.665579 8_1:+65919113 None:intergenic
ACTCATCAACAAAATTTGTG+AGG 0.667616 8_1:+65918716 None:intergenic
ATGCGTATAATTGGTTACCC+TGG 0.670206 8_1:-65919675 Msa1208040:CDS
TTATGGAAGGATGCAACCAG+TGG 0.688715 8_1:-65920298 Msa1208040:intron
TAACTGCAGATATACTCCAA+CGG 0.701546 8_1:-65919003 Msa1208040:intron
CTTGCCAAGAAAATTATGCG+CGG 0.710720 8_1:-65919768 Msa1208040:CDS
TGTCATCACTGGATACACCA+GGG 0.747103 8_1:+65919658 None:intergenic
GAAGACTGTCAGGAATACCG+TGG 0.755804 8_1:+65920841 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATATAGTAAACCA+AGG + chr8_1:65918757-65918776 None:intergenic 15.0%
!!! TTCTACTATGTTTTTATTTT+TGG - chr8_1:65918823-65918842 Msa1208040:CDS 15.0%
!! TAAAATTACATATATCAAAG+AGG - chr8_1:65919241-65919260 Msa1208040:intron 15.0%
!! AAATGGTTATAAACAAATAA+TGG - chr8_1:65919362-65919381 Msa1208040:CDS 15.0%
!!! ATATATAAAGTTTTGATGTA+GGG + chr8_1:65919795-65919814 None:intergenic 15.0%
!!! TATATATAAAGTTTTGATGT+AGG + chr8_1:65919796-65919815 None:intergenic 15.0%
!! TTAATATAACTATAAACTGA+TGG + chr8_1:65919844-65919863 None:intergenic 15.0%
!! GTTTATAGTTATATTAATAC+CGG - chr8_1:65919847-65919866 Msa1208040:intron 15.0%
!! TTTATAGTTATATTAATACC+GGG - chr8_1:65919848-65919867 Msa1208040:intron 15.0%
!!! TTTTTCTTATATTGTTCTTT+TGG - chr8_1:65920697-65920716 Msa1208040:intron 15.0%
!! AAAAGAGAAAAAATGAAAAA+GGG + chr8_1:65920958-65920977 None:intergenic 15.0%
!! AAAAAGAGAAAAAATGAAAA+AGG + chr8_1:65920959-65920978 None:intergenic 15.0%
!! AAAATTATTCTTAGTATATC+TGG + chr8_1:65921880-65921899 None:intergenic 15.0%
!!! TAATGTTGAAGAGTTTTAAA+AGG + chr8_1:65918603-65918622 None:intergenic 20.0%
!! GAATTAAACCATGTTATAAT+TGG - chr8_1:65918784-65918803 Msa1208040:CDS 20.0%
!!! AATTTTTACCATGTTATCAA+TGG - chr8_1:65918910-65918929 Msa1208040:intron 20.0%
!!! ATTATTATCCATTGATAACA+TGG + chr8_1:65918921-65918940 None:intergenic 20.0%
!! CAAAGTAAAAGGTAAAAAAA+TGG + chr8_1:65919122-65919141 None:intergenic 20.0%
!!! TATGTTAGTAAAAGTTTTAG+TGG + chr8_1:65919290-65919309 None:intergenic 20.0%
!! TGATACATAATAAATGAATC+AGG - chr8_1:65919423-65919442 Msa1208040:intron 20.0%
!!! TTTTTGCTTCACATTAAATT+AGG - chr8_1:65919962-65919981 Msa1208040:intron 20.0%
!! TTTATTCAGCTAAAATTGAA+GGG + chr8_1:65920295-65920314 None:intergenic 20.0%
!! ATTTATTCAGCTAAAATTGA+AGG + chr8_1:65920296-65920315 None:intergenic 20.0%
!!! TTAAGTTGTTTATCCAAATA+GGG + chr8_1:65920363-65920382 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG + chr8_1:65920364-65920383 None:intergenic 20.0%
!! ATGAAAATGTTAAATATGGT+AGG + chr8_1:65920654-65920673 None:intergenic 20.0%
!! AAAGAGAAAAAATGAAAAAG+GGG + chr8_1:65920957-65920976 None:intergenic 20.0%
!!! AACAATTTTACAACATAAAC+GGG + chr8_1:65921329-65921348 None:intergenic 20.0%
!!! CAACAATTTTACAACATAAA+CGG + chr8_1:65921330-65921349 None:intergenic 20.0%
!! TATGCTTTTGACACTTATTT+AGG + chr8_1:65918549-65918568 None:intergenic 25.0%
!!! TTTTAAAAGGTAAACGAAGT+TGG + chr8_1:65918590-65918609 None:intergenic 25.0%
! AGAGTTGAATTACCAATTAT+GGG + chr8_1:65918717-65918736 None:intergenic 25.0%
! AAGAGTTGAATTACCAATTA+TGG + chr8_1:65918718-65918737 None:intergenic 25.0%
! AAGAGAATCCAATTATAACA+TGG + chr8_1:65918795-65918814 None:intergenic 25.0%
! GTAAAAAAATGGTTCAAAGA+TGG + chr8_1:65919111-65919130 None:intergenic 25.0%
! GTGTAAAACTACAAAGTAAA+AGG + chr8_1:65919133-65919152 None:intergenic 25.0%
!!! TTCTTTTTTTGCTGTAATTG+AGG - chr8_1:65919153-65919172 Msa1208040:intron 25.0%
!!! TCTTTTTTTGCTGTAATTGA+GGG - chr8_1:65919154-65919173 Msa1208040:intron 25.0%
!!! ATCAAAGAGGTTAGTTTTTA+TGG - chr8_1:65919254-65919273 Msa1208040:intron 25.0%
! ACATAACTAACTAATAGTAC+TGG - chr8_1:65919332-65919351 Msa1208040:intron 25.0%
!! ATAGTACTGGAAAATTGAAA+TGG - chr8_1:65919345-65919364 Msa1208040:intron 25.0%
!! ATCAACTATACCATTTTCTA+AGG - chr8_1:65919546-65919565 Msa1208040:intron 25.0%
!! TCAACTATACCATTTTCTAA+GGG - chr8_1:65919547-65919566 Msa1208040:intron 25.0%
! ATTGGAGAAAATATAACTGA+AGG - chr8_1:65919900-65919919 Msa1208040:CDS 25.0%
! CTATTATATAAGAACACACT+AGG + chr8_1:65919998-65920017 None:intergenic 25.0%
! ATGATTTATTCTGCTTCTTA+TGG - chr8_1:65920090-65920109 Msa1208040:intron 25.0%
!! TTTTCCTTTAACAGTGTTAT+AGG - chr8_1:65920141-65920160 Msa1208040:intron 25.0%
! TTTCCTTTAACAGTGTTATA+GGG - chr8_1:65920142-65920161 Msa1208040:intron 25.0%
!!! GAATGAAGGCATTAATAAAT+AGG + chr8_1:65920245-65920264 None:intergenic 25.0%
! AAACACTAATGAAACTGTTT+GGG + chr8_1:65920438-65920457 None:intergenic 25.0%
! TAAACACTAATGAAACTGTT+TGG + chr8_1:65920439-65920458 None:intergenic 25.0%
! CTAACTGAATGAATATTCTT+TGG + chr8_1:65920501-65920520 None:intergenic 25.0%
! ATAAGAAATTTGAACTTTGG+AGG + chr8_1:65920594-65920613 None:intergenic 25.0%
! TCCAAAGTTCAAATTTCTTA+TGG - chr8_1:65920593-65920612 Msa1208040:CDS 25.0%
! TCCATAAGAAATTTGAACTT+TGG + chr8_1:65920597-65920616 None:intergenic 25.0%
! AAAGTTCAAATTTCTTATGG+AGG - chr8_1:65920596-65920615 Msa1208040:CDS 25.0%
! TGCGATGAAAATGTTAAATA+TGG + chr8_1:65920658-65920677 None:intergenic 25.0%
! ATAAGAAAAACAACTTTAGC+CGG + chr8_1:65920687-65920706 None:intergenic 25.0%
!! ACAATTTTACAACATAAACG+GGG + chr8_1:65921328-65921347 None:intergenic 25.0%
! TTATGTTGTAAAATTGTTGC+AGG - chr8_1:65921331-65921350 Msa1208040:intron 25.0%
!!! TATGTATCAGTCTTTTTTAC+TGG - chr8_1:65921610-65921629 Msa1208040:intron 25.0%
!!! CTTGTTTTGTATGTATTCAA+CGG + chr8_1:65921703-65921722 None:intergenic 25.0%
! ACATACAAAACAAGGATAAA+TGG - chr8_1:65921709-65921728 Msa1208040:intron 25.0%
GAGTTGAATTACCAATTATG+GGG + chr8_1:65918716-65918735 None:intergenic 30.0%
AACCAAGGTTATGATAAAGT+GGG + chr8_1:65918742-65918761 None:intergenic 30.0%
AAACCAAGGTTATGATAAAG+TGG + chr8_1:65918743-65918762 None:intergenic 30.0%
GATTAATCTCCTGAATTAGT+CGG + chr8_1:65918870-65918889 None:intergenic 30.0%
TGTAATTGAGGGAAACAAAA+AGG - chr8_1:65919165-65919184 Msa1208040:intron 30.0%
!!! GTTAGTTTTTATGGAACAGT+GGG - chr8_1:65919263-65919282 Msa1208040:intron 30.0%
ATCCTAAATGCCTGATTAAT+TGG - chr8_1:65920337-65920356 Msa1208040:CDS 30.0%
TGAATGAATATTCTTTGGAC+TGG + chr8_1:65920496-65920515 None:intergenic 30.0%
! CACTTTGTCTTTCATTTTAC+AGG - chr8_1:65920559-65920578 Msa1208040:intron 30.0%
! CATTTTCATCGCATAAATTC+CGG - chr8_1:65920665-65920684 Msa1208040:intron 30.0%
AAAAAGGGGTCAATAATGTA+AGG + chr8_1:65920943-65920962 None:intergenic 30.0%
!!! TTGGTTTTGATTGAAAGAAG+TGG + chr8_1:65920988-65921007 None:intergenic 30.0%
CAAGACTTGTCATAATGTAA+AGG + chr8_1:65921052-65921071 None:intergenic 30.0%
! TAGCATCTGAAATCATTAAC+TGG + chr8_1:65921089-65921108 None:intergenic 30.0%
TTTATTGACATTGTTGAACC+AGG - chr8_1:65921118-65921137 Msa1208040:intron 30.0%
TGATGATATAAATGCACTTC+AGG - chr8_1:65921142-65921161 Msa1208040:intron 30.0%
CGTTGAATACATACAAAACA+AGG - chr8_1:65921701-65921720 Msa1208040:intron 30.0%
ACTCATCAACAAAATTTGTG+AGG + chr8_1:65921786-65921805 None:intergenic 30.0%
TATTCTTAGTATATCTGGAC+AGG + chr8_1:65921875-65921894 None:intergenic 30.0%
!!! TCAGGCATAAGTTTTAAGAA+TGG + chr8_1:65921947-65921966 None:intergenic 30.0%
!! TTTAAACTGAAAGTGTTCTC+AGG + chr8_1:65921965-65921984 None:intergenic 30.0%
TTCAGTTTAAAGACTAGACA+TGG - chr8_1:65921974-65921993 Msa1208040:five_prime_UTR 30.0%
TCAGTTTAAAGACTAGACAT+GGG - chr8_1:65921975-65921994 Msa1208040:five_prime_UTR 30.0%
! GCTTTTGACACTTATTTAGG+AGG + chr8_1:65918546-65918565 None:intergenic 35.0%
TTCTATAGAAGCTAGTTGAG+TGG + chr8_1:65918637-65918656 None:intergenic 35.0%
TGATTATGATAATCTCTGGC+TGG + chr8_1:65918661-65918680 None:intergenic 35.0%
GTGGTGATTATGATAATCTC+TGG + chr8_1:65918665-65918684 None:intergenic 35.0%
TGAATTACCAATTATGGGGA+TGG + chr8_1:65918712-65918731 None:intergenic 35.0%
TTCCCACTTTATCATAACCT+TGG - chr8_1:65918737-65918756 Msa1208040:CDS 35.0%
TGGAAACTTGTATCCAATCT+TGG - chr8_1:65918843-65918862 Msa1208040:intron 35.0%
!! CATTTTTGGATCATCTGACT+TGG + chr8_1:65919004-65919023 None:intergenic 35.0%
CAAGTCAGATGATCCAAAAA+TGG - chr8_1:65919002-65919021 Msa1208040:intron 35.0%
ACTTGATGTTGTTGCACAAT+TGG - chr8_1:65919041-65919060 Msa1208040:intron 35.0%
TGTTGTTGCACAATTGGATA+AGG - chr8_1:65919047-65919066 Msa1208040:intron 35.0%
!!! GGTTAGTTTTTATGGAACAG+TGG - chr8_1:65919262-65919281 Msa1208040:intron 35.0%
!! CAAAAGAGTGTTCATGACAA+TGG + chr8_1:65919494-65919513 None:intergenic 35.0%
!! CTATACCATTTTCTAAGGGT+CGG - chr8_1:65919551-65919570 Msa1208040:intron 35.0%
TGAAAATGGTCGGTGTATTA+TGG - chr8_1:65919574-65919593 Msa1208040:intron 35.0%
ATTCCTGACAGTCTTCTTAA+AGG - chr8_1:65919665-65919684 Msa1208040:CDS 35.0%
! ATCTTCGCCTTTTCTTCATA+CGG + chr8_1:65919725-65919744 None:intergenic 35.0%
!! CTAATGGCTTCAGGTTTTAT+TGG - chr8_1:65919759-65919778 Msa1208040:CDS 35.0%
TCAATAGCTTCATGCATATC+AGG + chr8_1:65919930-65919949 None:intergenic 35.0%
CTTCCCTATAACACTGTTAA+AGG + chr8_1:65920148-65920167 None:intergenic 35.0%
TGTTATAGGGAAGTGACTAA+GGG - chr8_1:65920155-65920174 Msa1208040:intron 35.0%
AGTGTGGTTATTTATTTGCG+TGG + chr8_1:65920270-65920289 None:intergenic 35.0%
ATTCAGTTAGATGAATGCCA+AGG - chr8_1:65920511-65920530 Msa1208040:intron 35.0%
TGAAAGAAGATCGAAAGCTA+AGG + chr8_1:65920541-65920560 None:intergenic 35.0%
!! TTGAACTTTGGAGGATTTTG+TGG + chr8_1:65920585-65920604 None:intergenic 35.0%
! GAATATATTAGCCTCTGCAA+AGG - chr8_1:65920618-65920637 Msa1208040:intron 35.0%
! AATTCCGCGCATAATTTTCT+TGG + chr8_1:65920738-65920757 None:intergenic 35.0%
ATTATACGCATCACCCAAAA+TGG + chr8_1:65920815-65920834 None:intergenic 35.0%
!! TTTTGGGTGATGCGTATAAT+TGG - chr8_1:65920815-65920834 Msa1208040:CDS 35.0%
TGTAAGGTCTAACAAGCATA+GGG + chr8_1:65920927-65920946 None:intergenic 35.0%
ATGTAAGGTCTAACAAGCAT+AGG + chr8_1:65920928-65920947 None:intergenic 35.0%
TTCAATCAAAACCAATCCAG+TGG - chr8_1:65920993-65921012 Msa1208040:intron 35.0%
GTGCATTTATATCATCATCC+TGG + chr8_1:65921139-65921158 None:intergenic 35.0%
! ACTTCAGGTTTGCATTACAT+TGG - chr8_1:65921157-65921176 Msa1208040:intron 35.0%
TGGTGCTTTCTTGCAATATA+TGG - chr8_1:65921177-65921196 Msa1208040:intron 35.0%
CTTGAATACTACCTGAGATT+TGG - chr8_1:65921444-65921463 Msa1208040:CDS 35.0%
TCAAATGATCACCAAATCTC+AGG + chr8_1:65921458-65921477 None:intergenic 35.0%
GGTGATCATTTGATTAAGTG+TGG - chr8_1:65921465-65921484 Msa1208040:CDS 35.0%
TAACTGCAGATATACTCCAA+CGG - chr8_1:65921496-65921515 Msa1208040:intron 35.0%
TGTATGAGTCAACTTTGCAT+CGG - chr8_1:65921521-65921540 Msa1208040:intron 35.0%
!!! TACGCTGACTCTATATTTTG+AGG + chr8_1:65921560-65921579 None:intergenic 35.0%
!! CAGCGTAGTATATTTTTACG+AGG - chr8_1:65921573-65921592 Msa1208040:intron 35.0%
TTTACGAGGTTAGCACTAAT+TGG - chr8_1:65921587-65921606 Msa1208040:intron 35.0%
CAGTTTAAAGACTAGACATG+GGG - chr8_1:65921976-65921995 Msa1208040:five_prime_UTR 35.0%
GACACTTATTTAGGAGGAGA+AGG + chr8_1:65918540-65918559 None:intergenic 40.0%
ATCATAATCACCACCTACCA+TGG - chr8_1:65918671-65918690 Msa1208040:three_prime_UTR 40.0%
CTAAAGTTTACAGCCATGGT+AGG + chr8_1:65918687-65918706 None:intergenic 40.0%
! TTTAGCTCCATCCCCATAAT+TGG - chr8_1:65918702-65918721 Msa1208040:exon 40.0%
TGAATTAGTCGGTCCAAGAT+TGG + chr8_1:65918859-65918878 None:intergenic 40.0%
AATCTTGGACCGACTAATTC+AGG - chr8_1:65918858-65918877 Msa1208040:intron 40.0%
! AAAATTTTCCCGCTAGTGGA+CGG + chr8_1:65918896-65918915 None:intergenic 40.0%
! GGTAAAAATTTTCCCGCTAG+TGG + chr8_1:65918900-65918919 None:intergenic 40.0%
AGATGATCCAAAAATGGCTG+AGG - chr8_1:65919008-65919027 Msa1208040:intron 40.0%
! AGAAGCAGGGTTCTTTTATG+TGG - chr8_1:65919077-65919096 Msa1208040:intron 40.0%
GAGTGTTCATGACAATGGAT+TGG + chr8_1:65919489-65919508 None:intergenic 40.0%
TTTCACCGACCCTTAGAAAA+TGG + chr8_1:65919559-65919578 None:intergenic 40.0%
! TTTCTAAGGGTCGGTGAAAA+TGG - chr8_1:65919560-65919579 Msa1208040:intron 40.0%
AAATGGTCGGTGTATTATGG+AGG - chr8_1:65919577-65919596 Msa1208040:intron 40.0%
AAGACTAATTTCAGTCGCTG+TGG - chr8_1:65919616-65919635 Msa1208040:intron 40.0%
! ACTCCTTTAAGAAGACTGTC+AGG + chr8_1:65919671-65919690 None:intergenic 40.0%
CGAACTTCCGTATGAAGAAA+AGG - chr8_1:65919715-65919734 Msa1208040:CDS 40.0%
ATCAAAATGACTCCGGCTAA+TGG - chr8_1:65919743-65919762 Msa1208040:CDS 40.0%
TAAAACCTGAAGCCATTAGC+CGG + chr8_1:65919758-65919777 None:intergenic 40.0%
TGCAGAGGATATGAGAAGAT+TGG - chr8_1:65919882-65919901 Msa1208040:CDS 40.0%
ATCATTGAACCTGCTATGCT+AGG + chr8_1:65920075-65920094 None:intergenic 40.0%
GTGTTATAGGGAAGTGACTA+AGG - chr8_1:65920154-65920173 Msa1208040:intron 40.0%
TGGAGATCTTGGCAAAGTTA+TGG - chr8_1:65920184-65920203 Msa1208040:intron 40.0%
GATCTTGGCAAAGTTATGGA+AGG - chr8_1:65920188-65920207 Msa1208040:intron 40.0%
AACCAGTGGTATGAGGAAAT+AGG - chr8_1:65920215-65920234 Msa1208040:intron 40.0%
ACCAGTGGTATGAGGAAATA+GGG - chr8_1:65920216-65920235 Msa1208040:intron 40.0%
TTATTTGCGTGGAGGAATGA+AGG + chr8_1:65920259-65920278 None:intergenic 40.0%
GTGGTTATTTATTTGCGTGG+AGG + chr8_1:65920267-65920286 None:intergenic 40.0%
CTAAAATTGAAGGGAGAGTG+TGG + chr8_1:65920286-65920305 None:intergenic 40.0%
GGCCAATTAATCAGGCATTT+AGG + chr8_1:65920342-65920361 None:intergenic 40.0%
CCAAATAGGGCCAATTAATC+AGG + chr8_1:65920350-65920369 None:intergenic 40.0%
CCTGATTAATTGGCCCTATT+TGG - chr8_1:65920347-65920366 Msa1208040:CDS 40.0%
!! GAATATTCTTTGGACTGGCT+TGG + chr8_1:65920491-65920510 None:intergenic 40.0%
TCGAAAGCTAAGGTAATCCT+TGG + chr8_1:65920531-65920550 None:intergenic 40.0%
CTTGCCAAGAAAATTATGCG+CGG - chr8_1:65920731-65920750 Msa1208040:intron 40.0%
GGAATTGCTTTAGCATTAGG+TGG - chr8_1:65920752-65920771 Msa1208040:CDS 40.0%
GGATCACCATACGAATTTGA+AGG - chr8_1:65920773-65920792 Msa1208040:CDS 40.0%
CGATCACCTTCAAATTCGTA+TGG + chr8_1:65920782-65920801 None:intergenic 40.0%
ATGCGTATAATTGGTTACCC+TGG - chr8_1:65920824-65920843 Msa1208040:CDS 40.0%
TATCCAGTGATGACATTGGA+TGG - chr8_1:65920849-65920868 Msa1208040:CDS 40.0%
TTACCATCCAATGTCATCAC+TGG + chr8_1:65920855-65920874 None:intergenic 40.0%
!! CAATAGAGAGCTTCAGGTTT+TGG + chr8_1:65920888-65920907 None:intergenic 40.0%
GACAAACAATAGAGAGCTTC+AGG + chr8_1:65920894-65920913 None:intergenic 40.0%
! GATTTCAGATGCTACTTCAC+AGG - chr8_1:65921095-65921114 Msa1208040:intron 40.0%
TTGCAGGTAAGAAACCTATC+TGG - chr8_1:65921347-65921366 Msa1208040:intron 40.0%
TAAGAAACCTATCTGGCAAG+TGG - chr8_1:65921354-65921373 Msa1208040:intron 40.0%
! CAACATTGGTGACATGCTTA+AGG - chr8_1:65921412-65921431 Msa1208040:intron 40.0%
! AGTTGACTCATACAAACCGT+TGG + chr8_1:65921515-65921534 None:intergenic 40.0%
GTATGAGTCAACTTTGCATC+GGG - chr8_1:65921522-65921541 Msa1208040:intron 40.0%
TTTGTCTGTGAATGCAGTAG+TGG + chr8_1:65921661-65921680 None:intergenic 40.0%
ACAGACAAACTTTGATGCTG+CGG - chr8_1:65921672-65921691 Msa1208040:intron 40.0%
AAGTTTGAAAGAGCCGTCTA+CGG - chr8_1:65921739-65921758 Msa1208040:intron 40.0%
AAGTTTACAGCCATGGTAGG+TGG + chr8_1:65918684-65918703 None:intergenic 45.0%
GGAGCTAAAGTTTACAGCCA+TGG + chr8_1:65918691-65918710 None:intergenic 45.0%
TTAATCCTACCGTCCACTAG+CGG - chr8_1:65918884-65918903 Msa1208040:intron 45.0%
GCAACAACATCAAGTACAGC+AGG + chr8_1:65919036-65919055 None:intergenic 45.0%
ATAAGGCTTGCACAGAAGCA+GGG - chr8_1:65919064-65919083 Msa1208040:intron 45.0%
TAAGGGTCGGTGAAAATGGT+CGG - chr8_1:65919564-65919583 Msa1208040:intron 45.0%
GTGGTCCTTGATTGACAGAA+AGG - chr8_1:65919635-65919654 Msa1208040:intron 45.0%
CTTGATTGACAGAAAGGCCA+CGG - chr8_1:65919641-65919660 Msa1208040:intron 45.0%
GGCGAAGATCAAAATGACTC+CGG - chr8_1:65919736-65919755 Msa1208040:CDS 45.0%
CTAATTGAGCCTAGCATAGC+AGG - chr8_1:65920063-65920082 Msa1208040:intron 45.0%
! GAAGTGACTAAGGGCATGTA+TGG - chr8_1:65920164-65920183 Msa1208040:intron 45.0%
! AAGGGCATGTATGGAGATCT+TGG - chr8_1:65920173-65920192 Msa1208040:intron 45.0%
TTATGGAAGGATGCAACCAG+TGG - chr8_1:65920201-65920220 Msa1208040:intron 45.0%
ACCCTATTTCCTCATACCAC+TGG + chr8_1:65920220-65920239 None:intergenic 45.0%
GAGAAAACATGCCTTTGCAG+AGG + chr8_1:65920632-65920651 None:intergenic 45.0%
CGCGGAATTGCTTTAGCATT+AGG - chr8_1:65920749-65920768 Msa1208040:intron 45.0%
GAATTTGAAGGTGATCGAGC+TGG - chr8_1:65920785-65920804 Msa1208040:CDS 45.0%
! ATCGAGCTGGTGATCCATTT+TGG - chr8_1:65920798-65920817 Msa1208040:CDS 45.0%
! TCGAGCTGGTGATCCATTTT+GGG - chr8_1:65920799-65920818 Msa1208040:CDS 45.0%
TGTCATCACTGGATACACCA+GGG + chr8_1:65920844-65920863 None:intergenic 45.0%
ATGTCATCACTGGATACACC+AGG + chr8_1:65920845-65920864 None:intergenic 45.0%
GGTGTATCCAGTGATGACAT+TGG - chr8_1:65920845-65920864 Msa1208040:CDS 45.0%
ATAATCTGTGTGAGCTCCAC+TGG + chr8_1:65921012-65921031 None:intergenic 45.0%
AGTGGAGCTCACACAGATTA+TGG - chr8_1:65921011-65921030 Msa1208040:intron 45.0%
CCTATCTGGCAAGTGGATAT+CGG - chr8_1:65921361-65921380 Msa1208040:intron 45.0%
ATGTTGCACACAAATGTCCC+AGG + chr8_1:65921398-65921417 None:intergenic 45.0%
GGGACATTTGTGTGCAACAT+TGG - chr8_1:65921398-65921417 Msa1208040:intron 45.0%
TAATCCTACCGTCCACTAGC+GGG - chr8_1:65918885-65918904 Msa1208040:intron 50.0%
!! GCAGGATCCTCAGCCATTTT+TGG + chr8_1:65919018-65919037 None:intergenic 50.0%
GATAAGGCTTGCACAGAAGC+AGG - chr8_1:65919063-65919082 Msa1208040:intron 50.0%
CGTGGCCTTTCTGTCAATCA+AGG + chr8_1:65919643-65919662 None:intergenic 50.0%
GAAGACTGTCAGGAATACCG+TGG + chr8_1:65919661-65919680 None:intergenic 50.0%
AGGATGCAACCAGTGGTATG+AGG - chr8_1:65920208-65920227 Msa1208040:intron 50.0%
CCGATATCCACTTGCCAGAT+AGG + chr8_1:65921364-65921383 None:intergenic 50.0%
CACACAAATGTCCCAGGAAC+CGG + chr8_1:65921392-65921411 None:intergenic 50.0%
GACTAGATGCTCTCCGTAGA+CGG + chr8_1:65921755-65921774 None:intergenic 50.0%
!! CGGAGAGCATCTAGTCAAGA+AGG - chr8_1:65921759-65921778 Msa1208040:intron 50.0%
GTATATCTGGACAGGCAAGC+AGG + chr8_1:65921867-65921886 None:intergenic 50.0%
!! TTTTCCCGCTAGTGGACGGT+AGG + chr8_1:65918892-65918911 None:intergenic 55.0%
TGACTCCGGCTAATGGCTTC+AGG - chr8_1:65919750-65919769 Msa1208040:CDS 55.0%
CTCTGCAGCAGAAGTTAGCC+CGG + chr8_1:65919869-65919888 None:intergenic 55.0%
CTGTGTGAGCTCCACTGGAT+TGG + chr8_1:65921007-65921026 None:intergenic 55.0%
CAAGTGGATATCGGCACCTC+CGG - chr8_1:65921370-65921389 Msa1208040:intron 55.0%
ACAAATGTCCCAGGAACCGG+AGG + chr8_1:65921389-65921408 None:intergenic 55.0%
CGGGCTAACTTCTGCTGCAG+AGG - chr8_1:65919867-65919886 Msa1208040:intron 60.0%
ATATCGGCACCTCCGGTTCC+TGG - chr8_1:65921377-65921396 Msa1208040:intron 60.0%
TATCGGCACCTCCGGTTCCT+GGG - chr8_1:65921378-65921397 Msa1208040:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 65918508 65922013 65918508 ID=Msa1208040;Name=Msa1208040
chr8_1 mRNA 65918508 65922013 65918508 ID=Msa1208040-mRNA-1;Parent=Msa1208040;Name=Msa1208040-mRNA-1;_AED=0.05;_eAED=0.05;_QI=182|0.81|0.75|1|0.72|0.75|12|206|317
chr8_1 exon 65918508 65918845 65918508 ID=Msa1208040-mRNA-1:exon:21670;Parent=Msa1208040-mRNA-1
chr8_1 exon 65918927 65919016 65918927 ID=Msa1208040-mRNA-1:exon:21669;Parent=Msa1208040-mRNA-1
chr8_1 exon 65919088 65919168 65919088 ID=Msa1208040-mRNA-1:exon:21668;Parent=Msa1208040-mRNA-1
chr8_1 exon 65919358 65919404 65919358 ID=Msa1208040-mRNA-1:exon:21667;Parent=Msa1208040-mRNA-1
chr8_1 exon 65919489 65919508 65919489 ID=Msa1208040-mRNA-1:exon:21666;Parent=Msa1208040-mRNA-1
chr8_1 exon 65919651 65919797 65919651 ID=Msa1208040-mRNA-1:exon:21665;Parent=Msa1208040-mRNA-1
chr8_1 exon 65919878 65919940 65919878 ID=Msa1208040-mRNA-1:exon:21664;Parent=Msa1208040-mRNA-1
chr8_1 exon 65920299 65920366 65920299 ID=Msa1208040-mRNA-1:exon:21663;Parent=Msa1208040-mRNA-1
chr8_1 exon 65920571 65920634 65920571 ID=Msa1208040-mRNA-1:exon:21662;Parent=Msa1208040-mRNA-1
chr8_1 exon 65920750 65920868 65920750 ID=Msa1208040-mRNA-1:exon:21661;Parent=Msa1208040-mRNA-1
chr8_1 exon 65921423 65921511 65921423 ID=Msa1208040-mRNA-1:exon:21660;Parent=Msa1208040-mRNA-1
chr8_1 exon 65921798 65922013 65921798 ID=Msa1208040-mRNA-1:exon:21659;Parent=Msa1208040-mRNA-1
chr8_1 five_prime_UTR 65921832 65922013 65921832 ID=Msa1208040-mRNA-1:five_prime_utr;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65921798 65921831 65921798 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65921423 65921511 65921423 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65920750 65920868 65920750 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65920571 65920634 65920571 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65920299 65920366 65920299 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65919878 65919940 65919878 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65919651 65919797 65919651 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65919489 65919508 65919489 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65919358 65919404 65919358 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65919088 65919168 65919088 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65918927 65919016 65918927 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 CDS 65918714 65918845 65918714 ID=Msa1208040-mRNA-1:cds;Parent=Msa1208040-mRNA-1
chr8_1 three_prime_UTR 65918508 65918713 65918508 ID=Msa1208040-mRNA-1:three_prime_utr;Parent=Msa1208040-mRNA-1
Gene Sequence

>Msa1208040

ATGGCTGTAAACTTTAGCTCCATCCCCATAATTGATGATCCAAAAATGGCTGAGGATCCTGCTGTACTTGATGTTGTTGCACAATTGGATAAGGCTTGCACAGAAGCAGGGTTCTTTTATGTGAAAGGCCACGGTATTCCTGACAGTCTTCTTAAAGGAGTTCGAGATATAACGCGTAGATTCTTCGAACTTCCGTATGAAGAAAAGGCGAAGATCAAAATGACTCCGGCTAATGGCTTCAGAGGATATGAGAAGATTGGAGAAAATATAACTGAAGGTGCACCTGATATGCATGAAGCTATTGATTGTTATAGGGAAGTGACTAAGGGCATGTATGGAGATCTTGGCAAAGTTATGGAAGGATGCAACCAGTGGCCACAAAATCCTCCAAAGTTCAAATTTCTTATGGAGGAATATATTAGCCTCTGCAAAGGCATAGCAGATCTTGCCAAGAAAATTATGCGCGGAATTGCTTTAGCATTAGGTGGATCACCATACGAATTTGAAGGTGATCGAGCTGGTGATCCATTTTGGGTGATGCGTATAATTGGTTACCCTGGTGTATCCAGTGATGACATTGGATGTGGAGCTCACACAGATTATGGTTTATTGACATTGTTGAACCAGGATGATGATATAAATGCACTTCAGGTAAGAAACCTATCTGGCAAGTGGATATCGGCACCTCCGGTTCCTGGGACATTTGTGTGCAACATTGGTGACATGCTTAAGATATACTCCAACGGTTTGTATGAGTCAACTTTGCATCGGGTGATAAACAACTCCTCAAAATATAGAGTCAGCGTAGTATATTTTTACGAGACAAACTTTGATGCTGCGGTAGAGCCGTTGAATACATACAAAACAAGGATAAATGGTGACAAGAAGTTTGAAAGAGCCGTCTACGGAGAGCATCTAGTCAAGAAGGTCCTCACAAATTTTGTTGATGAGTGA
Protein sequence

>Msa1208040

MAVNFSSIPIIDDPKMAEDPAVLDVVAQLDKACTEAGFFYVKGHGIPDSLLKGVRDITRRFFELPYEEKAKIKMTPANGFRGYEKIGENITEGAPDMHEAIDCYREVTKGMYGDLGKVMEGCNQWPQNPPKFKFLMEEYISLCKGIADLAKKIMRGIALALGGSPYEFEGDRAGDPFWVMRIIGYPGVSSDDIGCGAHTDYGLLTLLNQDDDINALQVRNLSGKWISAPPVPGTFVCNIGDMLKIYSNGLYESTLHRVINNSSKYRVSVVYFYETNFDAAVEPLNTYKTRINGDKKFERAVYGEHLVKKVLTNFVDE*