Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410180 | sp|Q8TB22|SPT20_HUMAN | 43.045 | 762 | 382 | 15 | 53 | 795 | 56 | 784 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410180 | G7KRS7 | 97.878 | 801 | 14 | 1 | 1 | 801 | 1 | 798 | 0.0 | 1629 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa1410180 | 0.805200 | 1.497186e-49 | -8.615850e-47 |
| Msa0014790 | Msa1410180 | 0.803951 | 2.728467e-49 | -8.615850e-47 |
| Msa0021980 | Msa1410180 | 0.872739 | 2.522665e-67 | -8.615850e-47 |
| Msa0045660 | Msa1410180 | 0.803195 | 3.914742e-49 | -8.615850e-47 |
| Msa0047230 | Msa1410180 | 0.804341 | 2.263584e-49 | -8.615850e-47 |
| Msa0053480 | Msa1410180 | 0.828569 | 8.358430e-55 | -8.615850e-47 |
| Msa0053960 | Msa1410180 | 0.830743 | 2.473101e-55 | -8.615850e-47 |
| Msa0055650 | Msa1410180 | 0.816614 | 5.049521e-52 | -8.615850e-47 |
| Msa0070090 | Msa1410180 | 0.825594 | 4.304781e-54 | -8.615850e-47 |
| Msa0090350 | Msa1410180 | 0.824114 | 9.616788e-54 | -8.615850e-47 |
| Msa0093440 | Msa1410180 | 0.800192 | 1.616997e-48 | -8.615850e-47 |
| Msa0117300 | Msa1410180 | 0.835733 | 1.413282e-56 | -8.615850e-47 |
| Msa1346920 | Msa1410180 | 0.865081 | 7.649057e-65 | -8.615850e-47 |
| Msa1348240 | Msa1410180 | 0.843506 | 1.343653e-58 | -8.615850e-47 |
| Msa1352060 | Msa1410180 | 0.806778 | 6.973436e-50 | -8.615850e-47 |
| Msa1363560 | Msa1410180 | 0.818962 | 1.490667e-52 | -8.615850e-47 |
| Msa1368660 | Msa1410180 | 0.813827 | 2.101577e-51 | -8.615850e-47 |
| Msa1371360 | Msa1410180 | 0.833958 | 3.953567e-56 | -8.615850e-47 |
| Msa1371840 | Msa1410180 | 0.810439 | 1.152002e-50 | -8.615850e-47 |
| Msa1381720 | Msa1410180 | 0.832025 | 1.196090e-55 | -8.615850e-47 |
| Msa1386250 | Msa1410180 | 0.840931 | 6.460089e-58 | -8.615850e-47 |
| Msa1391600 | Msa1410180 | 0.810327 | 1.218321e-50 | -8.615850e-47 |
| Msa1395640 | Msa1410180 | 0.847996 | 8.118366e-60 | -8.615850e-47 |
| Msa1400460 | Msa1410180 | 0.804312 | 2.295247e-49 | -8.615850e-47 |
| Msa1410180 | Msa1415560 | 0.820498 | 6.643524e-53 | -8.615850e-47 |
| Msa1410180 | Msa1431240 | 0.806164 | 9.397005e-50 | -8.615850e-47 |
| Msa1410180 | Msa1432250 | 0.849699 | 2.734584e-60 | -8.615850e-47 |
| Msa1410180 | Msa1433380 | 0.850729 | 1.406425e-60 | -8.615850e-47 |
| Msa1410180 | Msa1440980 | 0.806409 | 8.342985e-50 | -8.615850e-47 |
| Msa1410180 | Msa1445250 | 0.816645 | 4.969976e-52 | -8.615850e-47 |
| Msa1410180 | Msa1450850 | 0.836092 | 1.145978e-56 | -8.615850e-47 |
| Msa1410180 | Msa1457070 | 0.829188 | 5.919853e-55 | -8.615850e-47 |
| Msa1410180 | Msa1457450 | 0.816466 | 5.451769e-52 | -8.615850e-47 |
| Msa1410180 | Msa1459630 | 0.834541 | 2.823733e-56 | -8.615850e-47 |
| Msa1410180 | Msa1460310 | -0.800969 | 1.122884e-48 | -8.615850e-47 |
| Msa0618260 | Msa1410180 | 0.806116 | 9.615109e-50 | -8.615850e-47 |
| Msa0622690 | Msa1410180 | 0.810903 | 9.146381e-51 | -8.615850e-47 |
| Msa0626230 | Msa1410180 | 0.800853 | 1.185776e-48 | -8.615850e-47 |
| Msa0639030 | Msa1410180 | 0.848457 | 6.053781e-60 | -8.615850e-47 |
| Msa0641020 | Msa1410180 | 0.807939 | 3.956747e-50 | -8.615850e-47 |
| Msa0641030 | Msa1410180 | 0.804507 | 2.089995e-49 | -8.615850e-47 |
| Msa0649530 | Msa1410180 | 0.810313 | 1.226408e-50 | -8.615850e-47 |
| Msa0664020 | Msa1410180 | 0.810287 | 1.242469e-50 | -8.615850e-47 |
| Msa0664110 | Msa1410180 | 0.839587 | 1.449602e-57 | -8.615850e-47 |
| Msa0664130 | Msa1410180 | 0.845015 | 5.284883e-59 | -8.615850e-47 |
| Msa0685880 | Msa1410180 | 0.852557 | 4.270514e-61 | -8.615850e-47 |
| Msa0691140 | Msa1410180 | 0.803642 | 3.163080e-49 | -8.615850e-47 |
| Msa0697600 | Msa1410180 | 0.843678 | 1.209098e-58 | -8.615850e-47 |
| Msa0719970 | Msa1410180 | 0.821366 | 4.195130e-53 | -8.615850e-47 |
| Msa0722930 | Msa1410180 | 0.815447 | 9.203268e-52 | -8.615850e-47 |
| Msa0723140 | Msa1410180 | 0.825418 | 4.739240e-54 | -8.615850e-47 |
| Msa0756940 | Msa1410180 | 0.825473 | 4.598745e-54 | -8.615850e-47 |
| Msa0790240 | Msa1410180 | 0.803242 | 3.826915e-49 | -8.615850e-47 |
| Msa0820350 | Msa1410180 | 0.804958 | 1.682438e-49 | -8.615850e-47 |
| Msa0828900 | Msa1410180 | 0.803079 | 4.136894e-49 | -8.615850e-47 |
| Msa0836510 | Msa1410180 | 0.827658 | 1.385194e-54 | -8.615850e-47 |
| Msa0131090 | Msa1410180 | 0.818247 | 2.165687e-52 | -8.615850e-47 |
| Msa0138230 | Msa1410180 | 0.802690 | 4.977602e-49 | -8.615850e-47 |
| Msa0143280 | Msa1410180 | 0.830019 | 3.717643e-55 | -8.615850e-47 |
| Msa0143360 | Msa1410180 | 0.802554 | 5.310396e-49 | -8.615850e-47 |
| Msa0148430 | Msa1410180 | 0.825746 | 3.962453e-54 | -8.615850e-47 |
| Msa0160650 | Msa1410180 | 0.842513 | 2.469849e-58 | -8.615850e-47 |
| Msa0164630 | Msa1410180 | 0.802927 | 4.446263e-49 | -8.615850e-47 |
| Msa0181410 | Msa1410180 | 0.801842 | 7.439618e-49 | -8.615850e-47 |
| Msa0184030 | Msa1410180 | 0.843738 | 1.164996e-58 | -8.615850e-47 |
| Msa0221940 | Msa1410180 | 0.825427 | 4.715182e-54 | -8.615850e-47 |
| Msa0225370 | Msa1410180 | 0.809894 | 1.509720e-50 | -8.615850e-47 |
| Msa1229710 | Msa1410180 | 0.803940 | 2.742015e-49 | -8.615850e-47 |
| Msa1230190 | Msa1410180 | 0.847456 | 1.143434e-59 | -8.615850e-47 |
| Msa1238370 | Msa1410180 | 0.819206 | 1.311828e-52 | -8.615850e-47 |
| Msa1244300 | Msa1410180 | 0.800539 | 1.374228e-48 | -8.615850e-47 |
| Msa1255520 | Msa1410180 | 0.806054 | 9.911223e-50 | -8.615850e-47 |
| Msa1260510 | Msa1410180 | 0.805796 | 1.123079e-49 | -8.615850e-47 |
| Msa1272770 | Msa1410180 | 0.817279 | 3.580410e-52 | -8.615850e-47 |
| Msa1296500 | Msa1410180 | 0.853505 | 2.286044e-61 | -8.615850e-47 |
| Msa1296610 | Msa1410180 | 0.851389 | 9.161879e-61 | -8.615850e-47 |
| Msa1297710 | Msa1410180 | 0.800088 | 1.698453e-48 | -8.615850e-47 |
| Msa1300360 | Msa1410180 | 0.801763 | 7.723971e-49 | -8.615850e-47 |
| Msa1304850 | Msa1410180 | 0.805336 | 1.402017e-49 | -8.615850e-47 |
| Msa1308460 | Msa1410180 | 0.812492 | 4.126524e-51 | -8.615850e-47 |
| Msa1325850 | Msa1410180 | 0.817430 | 3.310641e-52 | -8.615850e-47 |
| Msa1328600 | Msa1410180 | 0.839672 | 1.377382e-57 | -8.615850e-47 |
| Msa1329020 | Msa1410180 | 0.857065 | 2.102884e-62 | -8.615850e-47 |
| Msa1331730 | Msa1410180 | 0.810602 | 1.062573e-50 | -8.615850e-47 |
| Msa1339310 | Msa1410180 | 0.803100 | 4.094927e-49 | -8.615850e-47 |
| Msa0368790 | Msa1410180 | 0.830041 | 3.670614e-55 | -8.615850e-47 |
| Msa0378670 | Msa1410180 | 0.813389 | 2.624122e-51 | -8.615850e-47 |
| Msa0411000 | Msa1410180 | 0.821808 | 3.316605e-53 | -8.615850e-47 |
| Msa0421390 | Msa1410180 | 0.815669 | 8.210166e-52 | -8.615850e-47 |
| Msa0431940 | Msa1410180 | 0.815719 | 8.005047e-52 | -8.615850e-47 |
| Msa0455230 | Msa1410180 | 0.824807 | 6.608363e-54 | -8.615850e-47 |
| Msa0467710 | Msa1410180 | 0.848976 | 4.347492e-60 | -8.615850e-47 |
| Msa0467720 | Msa1410180 | 0.808282 | 3.344162e-50 | -8.615850e-47 |
| Msa0984840 | Msa1410180 | 0.803317 | 3.693159e-49 | -8.615850e-47 |
| Msa0984850 | Msa1410180 | 0.800957 | 1.129454e-48 | -8.615850e-47 |
| Msa0984860 | Msa1410180 | 0.804928 | 1.707058e-49 | -8.615850e-47 |
| Msa1026720 | Msa1410180 | 0.815883 | 7.359637e-52 | -8.615850e-47 |
| Msa1028720 | Msa1410180 | 0.824143 | 9.467346e-54 | -8.615850e-47 |
| Msa1031760 | Msa1410180 | 0.839601 | 1.437628e-57 | -8.615850e-47 |
| Msa1036360 | Msa1410180 | 0.818669 | 1.736999e-52 | -8.615850e-47 |
| Msa1038110 | Msa1410180 | 0.802102 | 6.580114e-49 | -8.615850e-47 |
| Msa1038890 | Msa1410180 | 0.817298 | 3.545536e-52 | -8.615850e-47 |
| Msa1042380 | Msa1410180 | 0.800929 | 1.144376e-48 | -8.615850e-47 |
| Msa1044450 | Msa1410180 | 0.840560 | 8.077563e-58 | -8.615850e-47 |
| Msa1067710 | Msa1410180 | 0.849120 | 3.965828e-60 | -8.615850e-47 |
| Msa1070830 | Msa1410180 | 0.843599 | 1.268760e-58 | -8.615850e-47 |
| Msa1071310 | Msa1410180 | 0.814537 | 1.464555e-51 | -8.615850e-47 |
| Msa1071460 | Msa1410180 | 0.814857 | 1.244091e-51 | -8.615850e-47 |
| Msa1076640 | Msa1410180 | 0.817316 | 3.513709e-52 | -8.615850e-47 |
| Msa1081710 | Msa1410180 | 0.912542 | 1.728741e-83 | -8.615850e-47 |
| Msa0251140 | Msa1410180 | 0.817554 | 3.105682e-52 | -8.615850e-47 |
| Msa0263520 | Msa1410180 | 0.804201 | 2.420156e-49 | -8.615850e-47 |
| Msa0266380 | Msa1410180 | 0.809604 | 1.743304e-50 | -8.615850e-47 |
| Msa0301300 | Msa1410180 | 0.830323 | 3.132316e-55 | -8.615850e-47 |
| Msa0338670 | Msa1410180 | 0.804002 | 2.662202e-49 | -8.615850e-47 |
| Msa0340530 | Msa1410180 | 0.807376 | 5.210857e-50 | -8.615850e-47 |
| Msa0343200 | Msa1410180 | 0.831511 | 1.601440e-55 | -8.615850e-47 |
| Msa0357090 | Msa1410180 | 0.802050 | 6.742167e-49 | -8.615850e-47 |
| Msa0363460 | Msa1410180 | 0.822259 | 2.607120e-53 | -8.615850e-47 |
| Msa1108780 | Msa1410180 | 0.822351 | 2.482043e-53 | -8.615850e-47 |
| Msa1113210 | Msa1410180 | 0.820095 | 8.218326e-53 | -8.615850e-47 |
| Msa1113280 | Msa1410180 | 0.838210 | 3.292079e-57 | -8.615850e-47 |
| Msa1125450 | Msa1410180 | 0.841713 | 4.022009e-58 | -8.615850e-47 |
| Msa1139240 | Msa1410180 | 0.802066 | 6.691109e-49 | -8.615850e-47 |
| Msa1151970 | Msa1410180 | 0.820522 | 6.559807e-53 | -8.615850e-47 |
| Msa1158650 | Msa1410180 | 0.835426 | 1.690247e-56 | -8.615850e-47 |
| Msa1164570 | Msa1410180 | 0.828864 | 7.093486e-55 | -8.615850e-47 |
| Msa1166170 | Msa1410180 | 0.991164 | 3.228620e-186 | -8.615850e-47 |
| Msa1166270 | Msa1410180 | 0.988918 | 6.090145e-176 | -8.615850e-47 |
| Msa1182400 | Msa1410180 | 0.855710 | 5.254299e-62 | -8.615850e-47 |
| Msa1191390 | Msa1410180 | 0.823576 | 1.285781e-53 | -8.615850e-47 |
| Msa1199750 | Msa1410180 | 0.817754 | 2.798578e-52 | -8.615850e-47 |
| Msa1204390 | Msa1410180 | 0.858387 | 8.533502e-63 | -8.615850e-47 |
| Msa1208040 | Msa1410180 | 0.846956 | 1.567999e-59 | -8.615850e-47 |
| Msa1208130 | Msa1410180 | 0.844754 | 6.213934e-59 | -8.615850e-47 |
| Msa1212740 | Msa1410180 | 0.814060 | 1.867482e-51 | -8.615850e-47 |
| Msa1212960 | Msa1410180 | 0.813360 | 2.662806e-51 | -8.615850e-47 |
| Msa1213460 | Msa1410180 | 0.804629 | 1.970599e-49 | -8.615850e-47 |
| Msa0520810 | Msa1410180 | 0.809369 | 1.958176e-50 | -8.615850e-47 |
| Msa0523360 | Msa1410180 | 0.808859 | 2.518360e-50 | -8.615850e-47 |
| Msa0535020 | Msa1410180 | 0.820031 | 8.500153e-53 | -8.615850e-47 |
| Msa0535050 | Msa1410180 | 0.816617 | 5.042293e-52 | -8.615850e-47 |
| Msa0544930 | Msa1410180 | 0.804622 | 1.977366e-49 | -8.615850e-47 |
| Msa0549740 | Msa1410180 | 0.816035 | 6.805244e-52 | -8.615850e-47 |
| Msa0555510 | Msa1410180 | 0.818371 | 2.029653e-52 | -8.615850e-47 |
| Msa0560370 | Msa1410180 | 0.819879 | 9.212898e-53 | -8.615850e-47 |
| Msa0575540 | Msa1410180 | 0.828624 | 8.104798e-55 | -8.615850e-47 |
| Msa0585930 | Msa1410180 | 0.803090 | 4.114623e-49 | -8.615850e-47 |
| Msa0586150 | Msa1410180 | 0.812678 | 3.756141e-51 | -8.615850e-47 |
| Msa0591780 | Msa1410180 | 0.809764 | 1.610312e-50 | -8.615850e-47 |
| Msa0843280 | Msa1410180 | 0.821809 | 3.313604e-53 | -8.615850e-47 |
| Msa0861480 | Msa1410180 | 0.815172 | 1.059204e-51 | -8.615850e-47 |
| Msa0861560 | Msa1410180 | 0.809126 | 2.207816e-50 | -8.615850e-47 |
| Msa0883350 | Msa1410180 | 0.809327 | 1.998813e-50 | -8.615850e-47 |
| Msa0883390 | Msa1410180 | 0.814009 | 1.916436e-51 | -8.615850e-47 |
| Msa0883410 | Msa1410180 | 0.829994 | 3.768999e-55 | -8.615850e-47 |
| Msa0883660 | Msa1410180 | 0.827004 | 1.987748e-54 | -8.615850e-47 |
| Msa0883670 | Msa1410180 | 0.810372 | 1.191131e-50 | -8.615850e-47 |
| Msa0883700 | Msa1410180 | 0.808358 | 3.220721e-50 | -8.615850e-47 |
| Msa0887000 | Msa1410180 | 0.818858 | 1.573566e-52 | -8.615850e-47 |
| Msa0902980 | Msa1410180 | 0.804944 | 1.693543e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410180 | MtrunA17_Chr7g0268821 | 97.878 | 801 | 14 | 1 | 1 | 801 | 1 | 798 | 0.0 | 1629 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410180 | AT4G03200.1 | 72.809 | 776 | 203 | 3 | 30 | 797 | 43 | 818 | 0.0 | 1196 |
| Msa1410180 | AT4G03200.2 | 73.431 | 685 | 182 | 0 | 113 | 797 | 1 | 685 | 0.0 | 1078 |
Find 214 sgRNAs with CRISPR-Local
Find 485 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACCGGTCTTGGAAATTT+TGG | 0.173405 | tig0023619:-39397 | None:intergenic |
| TTACTCGATCTCTATGAATT+TGG | 0.193304 | tig0023619:+42548 | Msa1410180:CDS |
| GACTCAGAATACGGTGGTTT+TGG | 0.209549 | tig0023619:+39367 | Msa1410180:CDS |
| ACCCGACTTGAAACCTTTAA+TGG | 0.210020 | tig0023619:+38613 | Msa1410180:CDS |
| AGGTTGGCTTCATTGGTTTC+TGG | 0.215557 | tig0023619:+42843 | Msa1410180:CDS |
| TACTAATGAAGAAGCGAATT+TGG | 0.216470 | tig0023619:-37154 | None:intergenic |
| AACTTCACTCACTGTTCTAT+TGG | 0.220073 | tig0023619:-43232 | None:intergenic |
| TAATGGTATACATAATTTAT+TGG | 0.231416 | tig0023619:+43546 | Msa1410180:three_prime_UTR |
| ATCCAAAGCTCCTGGTTTCT+TGG | 0.233239 | tig0023619:+42499 | Msa1410180:CDS |
| ATAAAGCAGCATCCTTTATT+AGG | 0.240439 | tig0023619:+42420 | Msa1410180:CDS |
| AAGTAAGTTCCACCCATTAA+AGG | 0.275561 | tig0023619:-38626 | None:intergenic |
| TGATTGGTTTGTTAGCATTA+AGG | 0.282939 | tig0023619:+38111 | Msa1410180:CDS |
| TCTTATAAGGTTGGCTTCAT+TGG | 0.283968 | tig0023619:+42836 | Msa1410180:CDS |
| TCTGCTGCACAACACATTAA+AGG | 0.286141 | tig0023619:-43108 | None:intergenic |
| TCAGAAATGGCGTCAAAATA+TGG | 0.289980 | tig0023619:+41489 | Msa1410180:CDS |
| TCTCCGCGTTAAATCTTATA+AGG | 0.301812 | tig0023619:+42823 | Msa1410180:CDS |
| TAACAGCAATATTGCTTTGA+TGG | 0.306227 | tig0023619:+43382 | Msa1410180:CDS |
| GAGACATATCAAGAAATTCT+TGG | 0.311303 | tig0023619:+41522 | Msa1410180:CDS |
| TTTGCTGGTCCATACGTAAA+AGG | 0.315645 | tig0023619:-40000 | None:intergenic |
| CTTTGTTGTTGGGATCTATA+TGG | 0.320749 | tig0023619:-43334 | None:intergenic |
| GGCCGGCCATATTTATCTTC+AGG | 0.324799 | tig0023619:-38653 | None:intergenic |
| TGGTGAAGGGTAAGTGCTTT+TGG | 0.327194 | tig0023619:-37251 | None:intergenic |
| ATCCATCTCTTCTTTGTTGT+TGG | 0.329961 | tig0023619:-43345 | None:intergenic |
| CTTTAGATTGAAGACTTACT+TGG | 0.331155 | tig0023619:+41339 | Msa1410180:intron |
| GCTTGTAGGTTATTGTATCT+TGG | 0.334653 | tig0023619:+41837 | Msa1410180:intron |
| TCCATCTCTTCTTTGTTGTT+GGG | 0.337926 | tig0023619:-43344 | None:intergenic |
| GTAAAGTTGATTCCTAATAA+AGG | 0.343575 | tig0023619:-42432 | None:intergenic |
| GCGAAACGCGGAACGTCTAT+TGG | 0.344390 | tig0023619:+42887 | Msa1410180:CDS |
| AGCTAACAAAAGTCAGAAAA+TGG | 0.344877 | tig0023619:+39477 | Msa1410180:CDS |
| TGATTTAAGGTGTCATGTTA+TGG | 0.347512 | tig0023619:+38045 | Msa1410180:intron |
| GGGCACTACAAGTGAAGTTT+TGG | 0.349927 | tig0023619:-43448 | None:intergenic |
| TGTAAATATACTCAAGTTGT+TGG | 0.352503 | tig0023619:+43625 | Msa1410180:three_prime_UTR |
| CCCGACTTGAAACCTTTAAT+GGG | 0.359141 | tig0023619:+38614 | Msa1410180:CDS |
| TTTATGGGCCATTGAATTGC+AGG | 0.363878 | tig0023619:+42589 | Msa1410180:CDS |
| GCTATTCTCAAGTACTCCTT+TGG | 0.366405 | tig0023619:-42395 | None:intergenic |
| ATTGGTAAACTTGTGTTGAT+TGG | 0.366702 | tig0023619:-37358 | None:intergenic |
| TTATCATCCAAATGTGGCTT+TGG | 0.368060 | tig0023619:-41585 | None:intergenic |
| ACTTCACTCACTGTTCTATT+GGG | 0.368350 | tig0023619:-43231 | None:intergenic |
| ATCCAAGAAACCAGGAGCTT+TGG | 0.372677 | tig0023619:-42501 | None:intergenic |
| TTGCCAAGTTGTTAAATGAT+TGG | 0.374280 | tig0023619:+38095 | Msa1410180:CDS |
| CACCAGTACCACTTGCTTAC+GGG | 0.377865 | tig0023619:-43148 | None:intergenic |
| TCATTTGATTTAAGGTTGAT+TGG | 0.391074 | tig0023619:+37515 | Msa1410180:intron |
| GAAGCGCCCAAAGCCACATT+TGG | 0.398918 | tig0023619:+41578 | Msa1410180:CDS |
| AAATTCAACTTTCCTGTTGT+CGG | 0.407243 | tig0023619:+41926 | Msa1410180:CDS |
| TAAGTTACCTTATCAACATC+TGG | 0.410583 | tig0023619:-38261 | None:intergenic |
| TATCATCCAAATGTGGCTTT+GGG | 0.412034 | tig0023619:-41584 | None:intergenic |
| CGCGTTAAATCTTATAAGGT+TGG | 0.413104 | tig0023619:+42827 | Msa1410180:CDS |
| GGCGTAAGTTGTTTGAAGTA+AGG | 0.414805 | tig0023619:+41553 | Msa1410180:CDS |
| TATATACTTGATAAGAAGAT+AGG | 0.417691 | tig0023619:-37586 | None:intergenic |
| CTGGGTTTCCTGCAATTCAA+TGG | 0.422376 | tig0023619:-42597 | None:intergenic |
| CCCATTAAAGGTTTCAAGTC+GGG | 0.426920 | tig0023619:-38614 | None:intergenic |
| TGAATGACAGACCTCTTTGC+TGG | 0.428705 | tig0023619:-40015 | None:intergenic |
| ATATTTATCACGGGATATCC+TGG | 0.431838 | tig0023619:+39875 | Msa1410180:CDS |
| AAGAGTCCTTTCTCTCAATC+AGG | 0.432050 | tig0023619:-41467 | None:intergenic |
| CAGAAAGGTAAAAGAGGCTT+GGG | 0.434267 | tig0023619:+38880 | Msa1410180:intron |
| GAGTAATCCAGATATCAAAA+AGG | 0.435767 | tig0023619:-42531 | None:intergenic |
| CCACCAGTACCACTTGCTTA+CGG | 0.441446 | tig0023619:-43149 | None:intergenic |
| GAATGTCCTGATTGAGAGAA+AGG | 0.442012 | tig0023619:+41461 | Msa1410180:CDS |
| CCTTCCCAAGGTTCTATCAA+TGG | 0.446301 | tig0023619:+37320 | Msa1410180:CDS |
| AAGTTGATCTCAACCGGTCT+TGG | 0.446493 | tig0023619:-39406 | None:intergenic |
| GAGAAGATGCTTTATGATCA+AGG | 0.450325 | tig0023619:+39795 | Msa1410180:CDS |
| AGCATCAAGTTGATCTCAAC+CGG | 0.452699 | tig0023619:-39412 | None:intergenic |
| AATTTGGAGGTGAAATCAAC+TGG | 0.453160 | tig0023619:+42564 | Msa1410180:CDS |
| AATTTCTCCCCGCTTGGTAA+TGG | 0.453942 | tig0023619:+43529 | Msa1410180:three_prime_UTR |
| TTGGGTACAGCACTTGTCAT+TGG | 0.456121 | tig0023619:+37944 | Msa1410180:CDS |
| GGTGGGTATTTCAATAATAC+AGG | 0.456882 | tig0023619:+42732 | Msa1410180:CDS |
| AAATATTTGGAAGGAGCAAA+TGG | 0.457316 | tig0023619:-43750 | None:intergenic |
| TAGGTTATTGTATCTTGGAA+TGG | 0.457555 | tig0023619:+41842 | Msa1410180:intron |
| TGAGAAAAGATTGAAAGATA+CGG | 0.461770 | tig0023619:+43074 | Msa1410180:CDS |
| CTTACTTCAGTGCCGACAAC+AGG | 0.464512 | tig0023619:-41938 | None:intergenic |
| AAAGCCACATTTGGATGATA+AGG | 0.465549 | tig0023619:+41587 | Msa1410180:CDS |
| GCCGGCCATATTTATCTTCA+GGG | 0.465616 | tig0023619:-38652 | None:intergenic |
| CCAGAAAGGTAAAAGAGGCT+TGG | 0.469243 | tig0023619:+38879 | Msa1410180:intron |
| AAGAGGCTTGGGAAAATAAG+AGG | 0.470199 | tig0023619:+38891 | Msa1410180:CDS |
| CGGGTGAAAGAAACACAGTC+AGG | 0.470917 | tig0023619:-38595 | None:intergenic |
| GAGCGTGTTGAAGAAGATAA+GGG | 0.471192 | tig0023619:-37401 | None:intergenic |
| CTCGATCTCTATGAATTTGG+AGG | 0.471691 | tig0023619:+42551 | Msa1410180:CDS |
| CTTTGTATGGTGGAGGAGGT+TGG | 0.472521 | tig0023619:+38570 | Msa1410180:CDS |
| TAAGGTTGATTGGTATCCAT+GGG | 0.474885 | tig0023619:+37525 | Msa1410180:intron |
| TTTATCCAGAAAGGTAAAAG+AGG | 0.476375 | tig0023619:+38874 | Msa1410180:intron |
| ACCTTGCAATGCATGGCAAA+AGG | 0.477263 | tig0023619:+39508 | Msa1410180:CDS |
| GAAGATAAATATGGCCGGCC+TGG | 0.477583 | tig0023619:+38656 | Msa1410180:CDS |
| TTCCCGTAAGCAAGTGGTAC+TGG | 0.479467 | tig0023619:+43146 | Msa1410180:CDS |
| AAACCAATCATTTAACAACT+TGG | 0.479813 | tig0023619:-38098 | None:intergenic |
| CATGACGGGGCAGAACCCTC+AGG | 0.480394 | tig0023619:+42792 | Msa1410180:CDS |
| TGTTTCGAACTCCAAGTCCT+TGG | 0.483177 | tig0023619:-37076 | None:intergenic |
| TAGGGCTTCTAAGATTCTAA+AGG | 0.483985 | tig0023619:+41886 | Msa1410180:CDS |
| GAGAAAGGACTCTTCAGAAA+TGG | 0.487686 | tig0023619:+41476 | Msa1410180:CDS |
| TTAAGGTTGATTGGTATCCA+TGG | 0.494639 | tig0023619:+37524 | Msa1410180:intron |
| GTAGCCATTGATAGAACCTT+GGG | 0.496306 | tig0023619:-37324 | None:intergenic |
| TGAGCGTGTTGAAGAAGATA+AGG | 0.497067 | tig0023619:-37402 | None:intergenic |
| TGCACCAAAATTTCCAAGAC+CGG | 0.497556 | tig0023619:+39393 | Msa1410180:CDS |
| GGGATATCCTGGACTATTTG+AGG | 0.497712 | tig0023619:+39886 | Msa1410180:CDS |
| GCTGACAGTGCGGAGAATGA+AGG | 0.498144 | tig0023619:+39954 | Msa1410180:CDS |
| TTTCTTGACAAGGATGGTGG+TGG | 0.499091 | tig0023619:+42714 | Msa1410180:CDS |
| TATTGTATCTTGGAATGGAC+TGG | 0.503014 | tig0023619:+41847 | Msa1410180:CDS |
| ATAGTAAATTTCTCCCCGCT+TGG | 0.503944 | tig0023619:+43523 | Msa1410180:exon |
| CTATATAACTATTGAAACAA+AGG | 0.505976 | tig0023619:+43717 | Msa1410180:three_prime_UTR |
| CTTCTATTCATATTTATCAC+GGG | 0.506868 | tig0023619:+39866 | Msa1410180:CDS |
| AATTCTCCATCCAAAGCTCC+TGG | 0.510812 | tig0023619:+42491 | Msa1410180:CDS |
| ATGGCAACTCACCAAGGACT+TGG | 0.512355 | tig0023619:+37065 | Msa1410180:five_prime_UTR |
| CTTCTGTATCAAATAAAAGT+AGG | 0.513586 | tig0023619:+43575 | Msa1410180:three_prime_UTR |
| GGAGCGACCAGATGTTGATA+AGG | 0.513680 | tig0023619:+38254 | Msa1410180:CDS |
| TTTCTTTACCTTGCAATGCA+TGG | 0.514499 | tig0023619:+39501 | Msa1410180:CDS |
| GAGGATACCGAAAAGTTAGA+TGG | 0.517125 | tig0023619:+39454 | Msa1410180:CDS |
| ACGTATGTGCAGGCTTTGTA+TGG | 0.518448 | tig0023619:+38557 | Msa1410180:CDS |
| TAATACAGGAGAAGATTCTT+CGG | 0.518631 | tig0023619:+42746 | Msa1410180:CDS |
| AAGTGGTACTGGTGGGTGAA+AGG | 0.520968 | tig0023619:+43157 | Msa1410180:CDS |
| GGCAGAACCCTCAGGGAACT+CGG | 0.521936 | tig0023619:+42800 | Msa1410180:CDS |
| TTCGGTTCTTCTCCGTGTGA+AGG | 0.523925 | tig0023619:+42764 | Msa1410180:CDS |
| AAAGTAGGTGTTGTTCTCCA+TGG | 0.523953 | tig0023619:+43590 | Msa1410180:three_prime_UTR |
| GAGGATCACTCATTTCAGAT+AGG | 0.525083 | tig0023619:-41419 | None:intergenic |
| CAAGTGTTGAGGAGAGTACA+TGG | 0.525297 | tig0023619:+37046 | Msa1410180:five_prime_UTR |
| AAGAAATTCTTGGAGAATGC+AGG | 0.527305 | tig0023619:+41532 | Msa1410180:CDS |
| GCACTATTACATAAAACAGA+TGG | 0.530288 | tig0023619:+41386 | Msa1410180:CDS |
| ACTTCTATTCATATTTATCA+CGG | 0.530341 | tig0023619:+39865 | Msa1410180:CDS |
| GTGTGAAGGAAGATCATGAC+GGG | 0.531942 | tig0023619:+42778 | Msa1410180:CDS |
| AGCGACGAATGATCAGTGAC+AGG | 0.532190 | tig0023619:-43470 | None:intergenic |
| CTGAGTATAGTCTTAAATCC+AGG | 0.532814 | tig0023619:-38674 | None:intergenic |
| TCCCAACAACAAAGAAGAGA+TGG | 0.535141 | tig0023619:+43343 | Msa1410180:CDS |
| ATTTCAAAACTCTTGTGCGC+AGG | 0.536160 | tig0023619:-43648 | None:intergenic |
| GATCCTCACAATGAATTCAA+AGG | 0.537026 | tig0023619:+41435 | Msa1410180:CDS |
| AAGCATGCTTTCAAATTCCT+CGG | 0.537135 | tig0023619:-43184 | None:intergenic |
| CATGTACTCTCCTCAACACT+TGG | 0.537200 | tig0023619:-37045 | None:intergenic |
| CTGACAGTGCGGAGAATGAA+GGG | 0.537786 | tig0023619:+39955 | Msa1410180:CDS |
| TAAAGCATCTTCTCAAAATG+TGG | 0.542123 | tig0023619:-39786 | None:intergenic |
| TATGTATACCATTACCAAGC+GGG | 0.542734 | tig0023619:-43537 | None:intergenic |
| TCCACGATCATGTTGGAGGA+GGG | 0.543194 | tig0023619:+39536 | Msa1410180:CDS |
| CAGGCTTTGTATGGTGGAGG+AGG | 0.543560 | tig0023619:+38566 | Msa1410180:CDS |
| AGGGCTTCTAAGATTCTAAA+GGG | 0.543621 | tig0023619:+41887 | Msa1410180:CDS |
| GAGAACTATGACTCAGAATA+CGG | 0.544413 | tig0023619:+39358 | Msa1410180:CDS |
| GCATCTTCAGAAACACCATC+AGG | 0.547966 | tig0023619:-38995 | None:intergenic |
| TGTCTCTCCTCAAATAGTCC+AGG | 0.550343 | tig0023619:-39893 | None:intergenic |
| GTCCACGATCATGTTGGAGG+AGG | 0.550824 | tig0023619:+39535 | Msa1410180:CDS |
| AAGATAAGGGCTTTGTTCTG+AGG | 0.551809 | tig0023619:-37388 | None:intergenic |
| GATATAGCGTGGATGAATGC+TGG | 0.552897 | tig0023619:+39566 | Msa1410180:CDS |
| AGAAGATGCTTTATGATCAA+GGG | 0.552984 | tig0023619:+39796 | Msa1410180:CDS |
| CTTATTCTATGCTTCATCAA+AGG | 0.553063 | tig0023619:+37193 | Msa1410180:exon |
| TTGTTCTGAGGCAAGTCGAT+TGG | 0.557034 | tig0023619:-37376 | None:intergenic |
| CTCACGCGTTACCCTTCCCA+AGG | 0.558936 | tig0023619:+37308 | Msa1410180:CDS |
| TGTAGCCATTGATAGAACCT+TGG | 0.560509 | tig0023619:-37325 | None:intergenic |
| TATTTGAGGAGAGACATGAT+TGG | 0.561284 | tig0023619:+39900 | Msa1410180:CDS |
| GTGCAGGCTTTGTATGGTGG+AGG | 0.561697 | tig0023619:+38563 | Msa1410180:CDS |
| CCGTAAGCAAGTGGTACTGG+TGG | 0.565112 | tig0023619:+43149 | Msa1410180:CDS |
| ATTCTAAAGGGTGAAGCTGA+AGG | 0.566730 | tig0023619:+41899 | Msa1410180:CDS |
| AAGAAACCAGGAGCTTTGGA+TGG | 0.568767 | tig0023619:-42497 | None:intergenic |
| AATTCTGATAAGTTACCTGA+TGG | 0.569980 | tig0023619:+38980 | Msa1410180:CDS |
| GGTATACATGACGTATGTGC+AGG | 0.570002 | tig0023619:+38547 | Msa1410180:intron |
| GCGAAAGCTTCTTCACCCCA+TGG | 0.571900 | tig0023619:-37541 | None:intergenic |
| ACTTTGTTTCTTGACAAGGA+TGG | 0.572739 | tig0023619:+42708 | Msa1410180:CDS |
| GGATACTTTGTTTCTTGACA+AGG | 0.575299 | tig0023619:+42704 | Msa1410180:intron |
| TGCAATTGAACAGCTTTCTG+AGG | 0.575716 | tig0023619:+38940 | Msa1410180:CDS |
| AGAGGCTTGGGAAAATAAGA+GGG | 0.582644 | tig0023619:+38892 | Msa1410180:CDS |
| GACTTGAAACCTTTAATGGG+TGG | 0.584669 | tig0023619:+38617 | Msa1410180:CDS |
| TTACAAATCACTCTACTCCA+TGG | 0.585502 | tig0023619:-43607 | None:intergenic |
| GGCGTCCACGATCATGTTGG+AGG | 0.585816 | tig0023619:+39532 | Msa1410180:CDS |
| TTCTTGACAAGGATGGTGGT+GGG | 0.586109 | tig0023619:+42715 | Msa1410180:CDS |
| GTAACGCGTGAGAATTTGAA+AGG | 0.587912 | tig0023619:-37297 | None:intergenic |
| CCCCTGAAGATAAATATGGC+CGG | 0.587984 | tig0023619:+38651 | Msa1410180:CDS |
| AAGATTGAAAGATACGGCTA+TGG | 0.590163 | tig0023619:+43080 | Msa1410180:CDS |
| ACCCATTAAAGGTTTCAAGT+CGG | 0.590664 | tig0023619:-38615 | None:intergenic |
| TTTCCTTTGAATTCATTGTG+AGG | 0.592018 | tig0023619:-41438 | None:intergenic |
| CACTATTACATAAAACAGAT+GGG | 0.597227 | tig0023619:+41387 | Msa1410180:CDS |
| TTTAAGGTGTCATGTTATGG+AGG | 0.597248 | tig0023619:+38048 | Msa1410180:intron |
| ATTACGTCTATGCTCAGAGC+AGG | 0.601231 | tig0023619:+39018 | Msa1410180:CDS |
| CATTGATAGAACCTTGGGAA+GGG | 0.602050 | tig0023619:-37319 | None:intergenic |
| CATTGAATTGCAGGAAACCC+AGG | 0.602432 | tig0023619:+42598 | Msa1410180:CDS |
| AGTAGACATTCCAAGTGTTG+AGG | 0.602831 | tig0023619:+37035 | Msa1410180:five_prime_UTR |
| TTTGTTGTAGTGGTGGTGAA+GGG | 0.605748 | tig0023619:-37264 | None:intergenic |
| TTGTTTCTTGACAAGGATGG+TGG | 0.607716 | tig0023619:+42711 | Msa1410180:CDS |
| TATGTGCAGGCTTTGTATGG+TGG | 0.608889 | tig0023619:+38560 | Msa1410180:CDS |
| CGTCATGATCTTCCTTCACA+CGG | 0.610972 | tig0023619:-42776 | None:intergenic |
| AGAGACATGATTGGTCCAGA+AGG | 0.612666 | tig0023619:+39909 | Msa1410180:CDS |
| GGGTGAAAGAAACACAGTCA+GGG | 0.615097 | tig0023619:-38594 | None:intergenic |
| ACCCTCCTCCAACATGATCG+TGG | 0.616559 | tig0023619:-39537 | None:intergenic |
| ATTGAAAGATACGGCTATGG+CGG | 0.616770 | tig0023619:+43083 | Msa1410180:CDS |
| TAACGCGTGAGAATTTGAAA+GGG | 0.620553 | tig0023619:-37296 | None:intergenic |
| AGGGATATGCTAGTTAAGAG+TGG | 0.624391 | tig0023619:+38911 | Msa1410180:CDS |
| GGAGGCGTCCACGATCATGT+TGG | 0.624610 | tig0023619:+39529 | Msa1410180:CDS |
| GCGGAGACCGAGTTCCCTGA+GGG | 0.625563 | tig0023619:-42807 | None:intergenic |
| CGGCCATATTTATCTTCAGG+GGG | 0.626670 | tig0023619:-38650 | None:intergenic |
| CGTAAGCAAGTGGTACTGGT+GGG | 0.628787 | tig0023619:+43150 | Msa1410180:CDS |
| GCGACGAATGATCAGTGACA+GGG | 0.630002 | tig0023619:-43469 | None:intergenic |
| CTGGATTTAAGACTATACTC+AGG | 0.630780 | tig0023619:+38675 | Msa1410180:CDS |
| CGCGGAGACCGAGTTCCCTG+AGG | 0.634991 | tig0023619:-42808 | None:intergenic |
| CCATTGATAGAACCTTGGGA+AGG | 0.639161 | tig0023619:-37320 | None:intergenic |
| TTGCAATGCATGGCAAAAGG+AGG | 0.645564 | tig0023619:+39511 | Msa1410180:CDS |
| GAATAACTATTCATGCAGCA+AGG | 0.646546 | tig0023619:+43409 | Msa1410180:CDS |
| GTATAGTCTTAAATCCAGGC+CGG | 0.649030 | tig0023619:-38670 | None:intergenic |
| ATGTATACCATTACCAAGCG+GGG | 0.649135 | tig0023619:-43536 | None:intergenic |
| AGGGTTTCACAGATATAGCG+TGG | 0.649631 | tig0023619:+39555 | Msa1410180:CDS |
| AATACCTTATCATCCAAATG+TGG | 0.649815 | tig0023619:-41591 | None:intergenic |
| TGTACCTTCCCGTAAGCAAG+TGG | 0.651953 | tig0023619:+43140 | Msa1410180:CDS |
| GCATAATCATCCAAGAAACC+AGG | 0.652211 | tig0023619:-42509 | None:intergenic |
| CAACCTTATAAGATTTAACG+CGG | 0.652953 | tig0023619:-42826 | None:intergenic |
| ATGACGGGGCAGAACCCTCA+GGG | 0.658467 | tig0023619:+42793 | Msa1410180:CDS |
| TTACGTATGGACCAGCAAAG+AGG | 0.658481 | tig0023619:+40004 | Msa1410180:CDS |
| GGTGAAAGAAACACAGTCAG+GGG | 0.663281 | tig0023619:-38593 | None:intergenic |
| CCGGCCATATTTATCTTCAG+GGG | 0.663666 | tig0023619:-38651 | None:intergenic |
| AGTACCACTTGCTTACGGGA+AGG | 0.664919 | tig0023619:-43144 | None:intergenic |
| CGTGTGAAGGAAGATCATGA+CGG | 0.667087 | tig0023619:+42777 | Msa1410180:CDS |
| AGCAGAGGATGCTGACAGTG+CGG | 0.677520 | tig0023619:+39944 | Msa1410180:CDS |
| AGCGTGGATGAATGCTGGCA+TGG | 0.681507 | tig0023619:+39571 | Msa1410180:CDS |
| TGACAGTGCGGAGAATGAAG+GGG | 0.684102 | tig0023619:+39956 | Msa1410180:CDS |
| GGTGGGTGAAAGGACTTCCG+AGG | 0.685823 | tig0023619:+43167 | Msa1410180:CDS |
| GAGTACATGGCAACTCACCA+AGG | 0.686175 | tig0023619:+37059 | Msa1410180:five_prime_UTR |
| AAGGTTGATTGGTATCCATG+GGG | 0.686742 | tig0023619:+37526 | Msa1410180:intron |
| CTTCCAATAGGTGGATCGAG+AGG | 0.702080 | tig0023619:+38233 | Msa1410180:intron |
| CGACGAATGATCAGTGACAG+GGG | 0.712691 | tig0023619:-43468 | None:intergenic |
| AGAAGATAGGAGCATCTCTG+CGG | 0.722530 | tig0023619:-37573 | None:intergenic |
| AACTATGACTCAGAATACGG+TGG | 0.724711 | tig0023619:+39361 | Msa1410180:CDS |
| TTATGTATACCATTACCAAG+CGG | 0.726046 | tig0023619:-43538 | None:intergenic |
| TGTGAAGGAAGATCATGACG+GGG | 0.770414 | tig0023619:+42779 | Msa1410180:CDS |
| TGAGCATTATAAGCGAAACG+CGG | 0.787842 | tig0023619:+42875 | Msa1410180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTAATTTTTTGAATATA+GGG | - | tig0023619:37717-37736 | None:intergenic | 10.0% |
| !!! | AAGTTTAATTTTTTGAATAT+AGG | - | tig0023619:37718-37737 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTACAAATTCA+TGG | - | tig0023619:40128-40147 | None:intergenic | 10.0% |
| !! | TACAAATATTTATATTTGTT+TGG | + | tig0023619:40288-40307 | Msa1410180:intron | 10.0% |
| !!! | AAAATTCTTATTTCTTTAAA+AGG | + | tig0023619:40825-40844 | Msa1410180:intron | 10.0% |
| !!! | AAATTCTTATTTCTTTAAAA+GGG | + | tig0023619:40826-40845 | Msa1410180:intron | 10.0% |
| !! | CTATTTATATTCATTTAAAT+AGG | + | tig0023619:40920-40939 | Msa1410180:intron | 10.0% |
| !! | ATTAACTTTAATATTCAATT+TGG | - | tig0023619:41132-41151 | None:intergenic | 10.0% |
| !!! | TTTTTCCTTTATAAAAATTT+TGG | + | tig0023619:41185-41204 | Msa1410180:intron | 10.0% |
| !!! | TTAAACCAAAATTTTTATAA+AGG | - | tig0023619:41193-41212 | None:intergenic | 10.0% |
| !! | ACTAAATAGTAATACATAAA+CGG | - | tig0023619:37744-37763 | None:intergenic | 15.0% |
| !!! | TATTTTGACATTTGATATTT+TGG | + | tig0023619:38016-38035 | Msa1410180:intron | 15.0% |
| !!! | ATTTTGGAAATTTTGATTTA+AGG | + | tig0023619:38032-38051 | Msa1410180:intron | 15.0% |
| !! | ATAATAACTGTTCTATATTA+AGG | + | tig0023619:38378-38397 | Msa1410180:intron | 15.0% |
| !! | TAATAACTGTTCTATATTAA+GGG | + | tig0023619:38379-38398 | Msa1410180:intron | 15.0% |
| !!! | CTATTTTATATGTTTTCAAT+CGG | + | tig0023619:40223-40242 | Msa1410180:intron | 15.0% |
| !! | AATATAAATATTTGTATCCA+AGG | - | tig0023619:40284-40303 | None:intergenic | 15.0% |
| !! | TATTAAAAAAATCAGCAAAA+TGG | - | tig0023619:40803-40822 | None:intergenic | 15.0% |
| !!! | TTTTTCTCATTTTTTTTGTA+TGG | + | tig0023619:41786-41805 | Msa1410180:intron | 15.0% |
| !! | TAATGGTATACATAATTTAT+TGG | + | tig0023619:43546-43565 | Msa1410180:three_prime_UTR | 15.0% |
| !!! | ACTAAAAAGATATTTTTACA+AGG | - | tig0023619:43785-43804 | None:intergenic | 15.0% |
| !! | TATATACTTGATAAGAAGAT+AGG | - | tig0023619:37589-37608 | None:intergenic | 20.0% |
| !!! | ACTAAGTAGAGAATTTTATT+GGG | - | tig0023619:37668-37687 | None:intergenic | 20.0% |
| !!! | ATGTATTACTATTTAGTTCT+AGG | + | tig0023619:37747-37766 | Msa1410180:intron | 20.0% |
| !!! | TGTATTACTATTTAGTTCTA+GGG | + | tig0023619:37748-37767 | Msa1410180:intron | 20.0% |
| !! | TCTTTATATTGAGAAAAACT+TGG | + | tig0023619:37858-37877 | Msa1410180:intron | 20.0% |
| !! | AAGCAATAGAAAAACATAAA+GGG | - | tig0023619:38145-38164 | None:intergenic | 20.0% |
| !! | AAAGCAATAGAAAAACATAA+AGG | - | tig0023619:38146-38165 | None:intergenic | 20.0% |
| !!! | TACTTATATAAGGTTTTATC+AGG | + | tig0023619:38301-38320 | Msa1410180:intron | 20.0% |
| !! | TATATATAATGACAATCAGA+AGG | + | tig0023619:38355-38374 | Msa1410180:intron | 20.0% |
| !!! | AGAGACTTTTACAAAAATTA+AGG | - | tig0023619:38441-38460 | None:intergenic | 20.0% |
| !!! | TTAATTTTTGTAAAAGTCTC+TGG | + | tig0023619:38440-38459 | Msa1410180:intron | 20.0% |
| !!! | TTGATTTTTCCATGTTAATT+AGG | + | tig0023619:39686-39705 | Msa1410180:intron | 20.0% |
| !! | ACTTCTATTCATATTTATCA+CGG | + | tig0023619:39865-39884 | Msa1410180:CDS | 20.0% |
| !! | TTTCCGTAATATATTTCTTA+TGG | + | tig0023619:40051-40070 | Msa1410180:intron | 20.0% |
| !! | TAGCCATAAGAAATATATTA+CGG | - | tig0023619:40057-40076 | None:intergenic | 20.0% |
| !! | ATTATTTAGCGATATGTTTA+TGG | - | tig0023619:40760-40779 | None:intergenic | 20.0% |
| !! | ATGAGAAATTAAAACAATGT+AGG | - | tig0023619:41255-41274 | None:intergenic | 20.0% |
| !!! | CATTGTTTTAATTTCTCATA+AGG | + | tig0023619:41256-41275 | Msa1410180:intron | 20.0% |
| !!! | CAAATTTCCAAATTTTTAAC+TGG | + | tig0023619:41296-41315 | Msa1410180:intron | 20.0% |
| !! | AATTACAACTGTAATAATTG+AGG | - | tig0023619:41970-41989 | None:intergenic | 20.0% |
| !! | ACTACCAATATTTAAAAAGA+TGG | + | tig0023619:42119-42138 | Msa1410180:intron | 20.0% |
| !! | CTACCAATATTTAAAAAGAT+GGG | + | tig0023619:42120-42139 | Msa1410180:intron | 20.0% |
| !!! | TTTCCCATCTTTTTAAATAT+TGG | - | tig0023619:42126-42145 | None:intergenic | 20.0% |
| !! | ATATTTAAAAAGATGGGAAA+CGG | + | tig0023619:42126-42145 | Msa1410180:intron | 20.0% |
| !! | AGTATAAAATTGTACACTTA+TGG | - | tig0023619:42198-42217 | None:intergenic | 20.0% |
| !!! | TTACTATGAAGAGAATTTTT+GGG | - | tig0023619:43510-43529 | None:intergenic | 20.0% |
| !!! | TTTACTATGAAGAGAATTTT+TGG | - | tig0023619:43511-43530 | None:intergenic | 20.0% |
| !! | CTATATAACTATTGAAACAA+AGG | + | tig0023619:43717-43736 | Msa1410180:three_prime_UTR | 20.0% |
| !! | ACAAAAAACAAATATTTGGA+AGG | - | tig0023619:43762-43781 | None:intergenic | 20.0% |
| !! | AAGGACAAAAAACAAATATT+TGG | - | tig0023619:43766-43785 | None:intergenic | 20.0% |
| !! | TAACTCGTTCATTTGATTTA+AGG | + | tig0023619:37507-37526 | Msa1410180:intron | 25.0% |
| !! | TCATTTGATTTAAGGTTGAT+TGG | + | tig0023619:37515-37534 | Msa1410180:intron | 25.0% |
| !! | GACTAAGTAGAGAATTTTAT+TGG | - | tig0023619:37669-37688 | None:intergenic | 25.0% |
| ! | GAATTGAATAAAACTTAGGT+AGG | - | tig0023619:37691-37710 | None:intergenic | 25.0% |
| ! | GACTGAATTGAATAAAACTT+AGG | - | tig0023619:37695-37714 | None:intergenic | 25.0% |
| !! | CAAAATCGTGAATTTTATAG+AGG | + | tig0023619:37818-37837 | Msa1410180:intron | 25.0% |
| ! | AAACCAATCATTTAACAACT+TGG | - | tig0023619:38101-38120 | None:intergenic | 25.0% |
| ! | AGCAATAGAAAAACATAAAG+GGG | - | tig0023619:38144-38163 | None:intergenic | 25.0% |
| ! | ATATTAAGGGATAGAATAGA+TGG | + | tig0023619:38392-38411 | Msa1410180:intron | 25.0% |
| ! | TTGCTAAGTTATAGAACTTA+AGG | + | tig0023619:38783-38802 | Msa1410180:intron | 25.0% |
| !! | ATGGTTTAAAATCATTGTTC+TGG | + | tig0023619:38809-38828 | Msa1410180:intron | 25.0% |
| ! | TTTACCTTTCTGGATAAAAT+AGG | - | tig0023619:38872-38891 | None:intergenic | 25.0% |
| ! | ATGTAAGGAAAAGGAAAAAA+TGG | + | tig0023619:39131-39150 | Msa1410180:intron | 25.0% |
| !! | TTTTCTCTTTTCTGTATATG+AGG | + | tig0023619:39184-39203 | Msa1410180:intron | 25.0% |
| ! | GCTTTACAAATCTAAAAAGT+TGG | + | tig0023619:39432-39451 | Msa1410180:CDS | 25.0% |
| ! | TTACAAATCTAAAAAGTTGG+AGG | + | tig0023619:39435-39454 | Msa1410180:CDS | 25.0% |
| ! | CTTCTATTCATATTTATCAC+GGG | + | tig0023619:39866-39885 | Msa1410180:CDS | 25.0% |
| ! | TCACAAGTAAAACAACAATA+CGG | - | tig0023619:40178-40197 | None:intergenic | 25.0% |
| !!! | AAATAGTCAAAGTTTGTTGA+CGG | - | tig0023619:40209-40228 | None:intergenic | 25.0% |
| ! | TTGGTTGCAATATCTTTAAT+AGG | + | tig0023619:40307-40326 | Msa1410180:intron | 25.0% |
| ! | TGCAATATCTTTAATAGGAA+TGG | + | tig0023619:40312-40331 | Msa1410180:intron | 25.0% |
| ! | GCAATATCTTTAATAGGAAT+GGG | + | tig0023619:40313-40332 | Msa1410180:intron | 25.0% |
| ! | ATGATAATCAAGACAAACAT+GGG | - | tig0023619:40386-40405 | None:intergenic | 25.0% |
| ! | TATGATAATCAAGACAAACA+TGG | - | tig0023619:40387-40406 | None:intergenic | 25.0% |
| !!! | TAACTCATAAGCTTGTTTTT+AGG | + | tig0023619:40405-40424 | Msa1410180:intron | 25.0% |
| ! | AACATGGACAAGATAAATAA+GGG | + | tig0023619:40506-40525 | Msa1410180:intron | 25.0% |
| ! | CTGACCGTTTAAAAAAAAAT+AGG | + | tig0023619:40600-40619 | Msa1410180:intron | 25.0% |
| !!! | GACGCCTATTTTTTTTTAAA+CGG | - | tig0023619:40607-40626 | None:intergenic | 25.0% |
| ! | TTAAAAAAAAATAGGCGTCA+AGG | + | tig0023619:40608-40627 | Msa1410180:intron | 25.0% |
| ! | ATAAACCTATTCAGCTAAAA+AGG | - | tig0023619:40983-41002 | None:intergenic | 25.0% |
| ! | ACTAATGAGCAAATAAATCA+TGG | + | tig0023619:41156-41175 | Msa1410180:intron | 25.0% |
| !!! | AAACTTTGATGTTCGTTTTT+CGG | + | tig0023619:41211-41230 | Msa1410180:intron | 25.0% |
| !!! | TTTTAATTTCTCATAAGGTG+TGG | + | tig0023619:41261-41280 | Msa1410180:intron | 25.0% |
| ! | TTAAGTGCCAGTTAAAAATT+TGG | - | tig0023619:41306-41325 | None:intergenic | 25.0% |
| ! | CACTATTACATAAAACAGAT+GGG | + | tig0023619:41387-41406 | Msa1410180:CDS | 25.0% |
| ! | TAAATAAATAGACTGCCTAA+GGG | - | tig0023619:41625-41644 | None:intergenic | 25.0% |
| ! | GTTAATCATAATTCTTGCTT+TGG | + | tig0023619:42218-42237 | Msa1410180:intron | 25.0% |
| ! | AATTTCTTCATACTTTCAAC+TGG | - | tig0023619:42280-42299 | None:intergenic | 25.0% |
| !! | TTGAAAGTATGAAGAAATTG+TGG | + | tig0023619:42281-42300 | Msa1410180:intron | 25.0% |
| !! | TGAAAGTATGAAGAAATTGT+GGG | + | tig0023619:42282-42301 | Msa1410180:intron | 25.0% |
| !! | GTAAAGTTGATTCCTAATAA+AGG | - | tig0023619:42435-42454 | None:intergenic | 25.0% |
| ! | TAGTTGGATAGGATTATTAT+CGG | + | tig0023619:42967-42986 | Msa1410180:intron | 25.0% |
| ! | GAATGAATATATTATCTACC+AGG | + | tig0023619:42990-43009 | Msa1410180:intron | 25.0% |
| ! | TGAGAAAAGATTGAAAGATA+CGG | + | tig0023619:43074-43093 | Msa1410180:CDS | 25.0% |
| ! | CTTCTGTATCAAATAAAAGT+AGG | + | tig0023619:43575-43594 | Msa1410180:three_prime_UTR | 25.0% |
| !! | TGTAAATATACTCAAGTTGT+TGG | + | tig0023619:43625-43644 | Msa1410180:three_prime_UTR | 25.0% |
| !!! | ATATCTTTTTAGTCACATTG+TGG | + | tig0023619:43792-43811 | Msa1410180:three_prime_UTR | 25.0% |
| TACTAATGAAGAAGCGAATT+TGG | - | tig0023619:37157-37176 | None:intergenic | 30.0% | |
| CTTATTCTATGCTTCATCAA+AGG | + | tig0023619:37193-37212 | Msa1410180:exon | 30.0% | |
| !! | GATTCGAAATTTTGTTGTAG+TGG | - | tig0023619:37277-37296 | None:intergenic | 30.0% |
| ! | ATTGGTAAACTTGTGTTGAT+TGG | - | tig0023619:37361-37380 | None:intergenic | 30.0% |
| AGAATTAGAAGATACGTACA+GGG | - | tig0023619:37431-37450 | None:intergenic | 30.0% | |
| AAGAATTAGAAGATACGTAC+AGG | - | tig0023619:37432-37451 | None:intergenic | 30.0% | |
| !! | ATGCCAATTTGATTTGAAGT+TGG | + | tig0023619:37925-37944 | Msa1410180:intron | 30.0% |
| !! | TGCCAATTTGATTTGAAGTT+GGG | + | tig0023619:37926-37945 | Msa1410180:intron | 30.0% |
| TACCCAACTTCAAATCAAAT+TGG | - | tig0023619:37931-37950 | None:intergenic | 30.0% | |
| ! | TGATTTAAGGTGTCATGTTA+TGG | + | tig0023619:38045-38064 | Msa1410180:intron | 30.0% |
| TTGCCAAGTTGTTAAATGAT+TGG | + | tig0023619:38095-38114 | Msa1410180:CDS | 30.0% | |
| !! | TGATTGGTTTGTTAGCATTA+AGG | + | tig0023619:38111-38130 | Msa1410180:CDS | 30.0% |
| !! | TAGAGCAACTTGTTAAGTAA+TGG | - | tig0023619:38195-38214 | None:intergenic | 30.0% |
| TAAGTTACCTTATCAACATC+TGG | - | tig0023619:38264-38283 | None:intergenic | 30.0% | |
| !! | AAAAGTCTCTGGAATTTGAA+TGG | + | tig0023619:38451-38470 | Msa1410180:intron | 30.0% |
| AAGATGCTTATAGAGACTAT+AGG | + | tig0023619:38476-38495 | Msa1410180:intron | 30.0% | |
| AGATGCTTATAGAGACTATA+GGG | + | tig0023619:38477-38496 | Msa1410180:intron | 30.0% | |
| GTTATAGAACTTAAGGTCAA+TGG | + | tig0023619:38790-38809 | Msa1410180:intron | 30.0% | |
| ! | TGTTCCTATTTTATCCAGAA+AGG | + | tig0023619:38865-38884 | Msa1410180:intron | 30.0% |
| TTTATCCAGAAAGGTAAAAG+AGG | + | tig0023619:38874-38893 | Msa1410180:intron | 30.0% | |
| AATTCTGATAAGTTACCTGA+TGG | + | tig0023619:38980-38999 | Msa1410180:CDS | 30.0% | |
| ! | TTTTCTGTATATGAGGAACA+GGG | + | tig0023619:39191-39210 | Msa1410180:intron | 30.0% |
| AGCTAACAAAAGTCAGAAAA+TGG | + | tig0023619:39477-39496 | Msa1410180:CDS | 30.0% | |
| ! | TAAAGCATCTTCTCAAAATG+TGG | - | tig0023619:39789-39808 | None:intergenic | 30.0% |
| AGAAGATGCTTTATGATCAA+GGG | + | tig0023619:39796-39815 | Msa1410180:CDS | 30.0% | |
| ! | CTTATGGCTAATTGCATTTT+AGG | + | tig0023619:40067-40086 | Msa1410180:intron | 30.0% |
| ATATCTTTAATAGGAATGGG+AGG | + | tig0023619:40316-40335 | Msa1410180:intron | 30.0% | |
| TATCTTTAATAGGAATGGGA+GGG | + | tig0023619:40317-40336 | Msa1410180:intron | 30.0% | |
| !!! | TGGGGTTTGAATTTTAAAAC+AGG | - | tig0023619:40367-40386 | None:intergenic | 30.0% |
| TGATAATCAAGACAAACATG+GGG | - | tig0023619:40385-40404 | None:intergenic | 30.0% | |
| ATTCCTTTAAACATGCTAAC+AGG | - | tig0023619:40436-40455 | None:intergenic | 30.0% | |
| CTTAGAACTTAGAGATAGAT+TGG | - | tig0023619:40464-40483 | None:intergenic | 30.0% | |
| GAACATGGACAAGATAAATA+AGG | + | tig0023619:40505-40524 | Msa1410180:intron | 30.0% | |
| AGCATTCTTCATATTATGCT+GGG | - | tig0023619:40576-40595 | None:intergenic | 30.0% | |
| TAGCATTCTTCATATTATGC+TGG | - | tig0023619:40577-40596 | None:intergenic | 30.0% | |
| AATATAAGTCAGGCTATCTA+CGG | - | tig0023619:41091-41110 | None:intergenic | 30.0% | |
| ACTTATATTCACCCCTTTAT+TGG | + | tig0023619:41102-41121 | Msa1410180:intron | 30.0% | |
| AATTTGGAAGTCCAATAAAG+GGG | - | tig0023619:41116-41135 | None:intergenic | 30.0% | |
| CAATTTGGAAGTCCAATAAA+GGG | - | tig0023619:41117-41136 | None:intergenic | 30.0% | |
| TCAATTTGGAAGTCCAATAA+AGG | - | tig0023619:41118-41137 | None:intergenic | 30.0% | |
| CTTTAGATTGAAGACTTACT+TGG | + | tig0023619:41339-41358 | Msa1410180:intron | 30.0% | |
| GCACTATTACATAAAACAGA+TGG | + | tig0023619:41386-41405 | Msa1410180:CDS | 30.0% | |
| TTTCCTTTGAATTCATTGTG+AGG | - | tig0023619:41441-41460 | None:intergenic | 30.0% | |
| GAGACATATCAAGAAATTCT+TGG | + | tig0023619:41522-41541 | Msa1410180:CDS | 30.0% | |
| AATACCTTATCATCCAAATG+TGG | - | tig0023619:41594-41613 | None:intergenic | 30.0% | |
| ! | CATTTGGATGATAAGGTATT+AGG | + | tig0023619:41594-41613 | Msa1410180:intron | 30.0% |
| CTAAATAAATAGACTGCCTA+AGG | - | tig0023619:41626-41645 | None:intergenic | 30.0% | |
| CTTAGGCAGTCTATTTATTT+AGG | + | tig0023619:41624-41643 | Msa1410180:intron | 30.0% | |
| ! | AACTGTTGATGAACAAACTA+TGG | + | tig0023619:41734-41753 | Msa1410180:intron | 30.0% |
| TACAATAACCTACAAGCATA+GGG | - | tig0023619:41834-41853 | None:intergenic | 30.0% | |
| ATACAATAACCTACAAGCAT+AGG | - | tig0023619:41835-41854 | None:intergenic | 30.0% | |
| TAGGTTATTGTATCTTGGAA+TGG | + | tig0023619:41842-41861 | Msa1410180:intron | 30.0% | |
| AAATTCAACTTTCCTGTTGT+CGG | + | tig0023619:41926-41945 | Msa1410180:CDS | 30.0% | |
| ! | TCTTTTCCTAATTAAGTGTC+GGG | - | tig0023619:42059-42078 | None:intergenic | 30.0% |
| ! | CTCTTTTCCTAATTAAGTGT+CGG | - | tig0023619:42060-42079 | None:intergenic | 30.0% |
| GACACTTAATTAGGAAAAGA+GGG | + | tig0023619:42059-42078 | Msa1410180:intron | 30.0% | |
| AAGCTGGAATAAAACATCAA+AGG | - | tig0023619:42095-42114 | None:intergenic | 30.0% | |
| ! | AATATTGGTAGTCATTAAGC+TGG | - | tig0023619:42111-42130 | None:intergenic | 30.0% |
| ATAAAGCAGCATCCTTTATT+AGG | + | tig0023619:42420-42439 | Msa1410180:CDS | 30.0% | |
| ! | GATTATGCCTTTTTGATATC+TGG | + | tig0023619:42524-42543 | Msa1410180:CDS | 30.0% |
| GAGTAATCCAGATATCAAAA+AGG | - | tig0023619:42534-42553 | None:intergenic | 30.0% | |
| TTACTCGATCTCTATGAATT+TGG | + | tig0023619:42548-42567 | Msa1410180:CDS | 30.0% | |
| !!! | TGAAATCAACTGGCTTTTAT+GGG | + | tig0023619:42574-42593 | Msa1410180:CDS | 30.0% |
| TAATACAGGAGAAGATTCTT+CGG | + | tig0023619:42746-42765 | Msa1410180:CDS | 30.0% | |
| CAACCTTATAAGATTTAACG+CGG | - | tig0023619:42829-42848 | None:intergenic | 30.0% | |
| AGTTGGATAGGATTATTATC+GGG | + | tig0023619:42968-42987 | Msa1410180:intron | 30.0% | |
| TAACTAGGATTCCCTTTAAA+CGG | + | tig0023619:43035-43054 | Msa1410180:intron | 30.0% | |
| GTCAACAATAATATTTGCGT+TGG | + | tig0023619:43294-43313 | Msa1410180:intron | 30.0% | |
| !! | ACAAAGAAGAGATGGATTTT+TGG | + | tig0023619:43351-43370 | Msa1410180:CDS | 30.0% |
| !! | CAAAGAAGAGATGGATTTTT+GGG | + | tig0023619:43352-43371 | Msa1410180:CDS | 30.0% |
| TAACAGCAATATTGCTTTGA+TGG | + | tig0023619:43382-43401 | Msa1410180:CDS | 30.0% | |
| TTATGTATACCATTACCAAG+CGG | - | tig0023619:43541-43560 | None:intergenic | 30.0% | |
| AAATATTTGGAAGGAGCAAA+TGG | - | tig0023619:43753-43772 | None:intergenic | 30.0% | |
| ! | TTTTAGTCACATTGTGGTTT+TGG | + | tig0023619:43798-43817 | Msa1410180:three_prime_UTR | 30.0% |
| !! | TCGAAATTTTGTTGTAGTGG+TGG | - | tig0023619:37274-37293 | None:intergenic | 35.0% |
| TAACGCGTGAGAATTTGAAA+GGG | - | tig0023619:37299-37318 | None:intergenic | 35.0% | |
| ! | TTAAGGTTGATTGGTATCCA+TGG | + | tig0023619:37524-37543 | Msa1410180:intron | 35.0% |
| ! | TAAGGTTGATTGGTATCCAT+GGG | + | tig0023619:37525-37544 | Msa1410180:intron | 35.0% |
| TTGGTTGTGTAATTAACCTC+TGG | + | tig0023619:37877-37896 | Msa1410180:intron | 35.0% | |
| !!! | TTAACCTCTGGTTTTGTATG+TGG | + | tig0023619:37889-37908 | Msa1410180:intron | 35.0% |
| ! | TTTAAGGTGTCATGTTATGG+AGG | + | tig0023619:38048-38067 | Msa1410180:intron | 35.0% |
| TTAGTGCATCTTATTAGCAG+TGG | - | tig0023619:38507-38526 | None:intergenic | 35.0% | |
| !!! | AAAGATTTTTTTCTCTGCGC+AGG | + | tig0023619:38526-38545 | Msa1410180:intron | 35.0% |
| ! | ACCCATTAAAGGTTTCAAGT+CGG | - | tig0023619:38618-38637 | None:intergenic | 35.0% |
| AAGTAAGTTCCACCCATTAA+AGG | - | tig0023619:38629-38648 | None:intergenic | 35.0% | |
| TTTCCCCCTGAAGATAAATA+TGG | + | tig0023619:38647-38666 | Msa1410180:CDS | 35.0% | |
| ! | CTGAGTATAGTCTTAAATCC+AGG | - | tig0023619:38677-38696 | None:intergenic | 35.0% |
| ! | CTGGATTTAAGACTATACTC+AGG | + | tig0023619:38675-38694 | Msa1410180:CDS | 35.0% |
| !! | AAAATCATTGTTCTGGCTCT+TGG | + | tig0023619:38816-38835 | Msa1410180:intron | 35.0% |
| ATTCCCTTGTGTCTAAGAAA+TGG | - | tig0023619:39113-39132 | None:intergenic | 35.0% | |
| ATACAGAAAAGAGAAAACGC+AGG | - | tig0023619:39181-39200 | None:intergenic | 35.0% | |
| ! | CTTTTCTGTATATGAGGAAC+AGG | + | tig0023619:39190-39209 | Msa1410180:intron | 35.0% |
| TTTCTGTATATGAGGAACAG+GGG | + | tig0023619:39192-39211 | Msa1410180:intron | 35.0% | |
| GAGAACTATGACTCAGAATA+CGG | + | tig0023619:39358-39377 | Msa1410180:CDS | 35.0% | |
| ! | GTTAGCTCCATCTAACTTTT+CGG | - | tig0023619:39464-39483 | None:intergenic | 35.0% |
| TTTCTTTACCTTGCAATGCA+TGG | + | tig0023619:39501-39520 | Msa1410180:CDS | 35.0% | |
| GACTTATCAGATACAACTGA+TGG | - | tig0023619:39615-39634 | None:intergenic | 35.0% | |
| ACAGCACATCCTAATTAACA+TGG | - | tig0023619:39698-39717 | None:intergenic | 35.0% | |
| GAGAAGATGCTTTATGATCA+AGG | + | tig0023619:39795-39814 | Msa1410180:CDS | 35.0% | |
| ATATTTATCACGGGATATCC+TGG | + | tig0023619:39875-39894 | Msa1410180:CDS | 35.0% | |
| TATTTGAGGAGAGACATGAT+TGG | + | tig0023619:39900-39919 | Msa1410180:CDS | 35.0% | |
| GCTGAAAAAATTTCACCTTC+TGG | - | tig0023619:39927-39946 | None:intergenic | 35.0% | |
| !!! | AGGTGAAATTTTTTCAGCAG+AGG | + | tig0023619:39929-39948 | Msa1410180:CDS | 35.0% |
| ! | ATGTTTTCAATCGGCTGTTT+TGG | + | tig0023619:40232-40251 | Msa1410180:intron | 35.0% |
| TTGTGTAGCACAACATATGT+AGG | - | tig0023619:40261-40280 | None:intergenic | 35.0% | |
| GATAAATAAGGGTCAAGTAG+TGG | + | tig0023619:40517-40536 | Msa1410180:intron | 35.0% | |
| TTCATATTATGCTGGGAGTA+GGG | - | tig0023619:40569-40588 | None:intergenic | 35.0% | |
| TTTAAATAGGTCAGCCTATG+AGG | + | tig0023619:40933-40952 | Msa1410180:intron | 35.0% | |
| AGCTATCTAAAAAGCCTCAT+AGG | - | tig0023619:40950-40969 | None:intergenic | 35.0% | |
| !!! | CTTGACCTTTTTAGCTGAAT+AGG | + | tig0023619:40975-40994 | Msa1410180:intron | 35.0% |
| AAAATCTAGCTGCCTAATGT+AGG | + | tig0023619:41051-41070 | Msa1410180:intron | 35.0% | |
| ATATAAGTCAGGCTATCTAC+GGG | - | tig0023619:41090-41109 | None:intergenic | 35.0% | |
| TAAAGGGGTGAATATAAGTC+AGG | - | tig0023619:41101-41120 | None:intergenic | 35.0% | |
| !! | TTTTTAACTGGCACTTAACC+TGG | + | tig0023619:41308-41327 | Msa1410180:intron | 35.0% |
| CAATCTAAAGAGAACAAACC+AGG | - | tig0023619:41329-41348 | None:intergenic | 35.0% | |
| GATCCTCACAATGAATTCAA+AGG | + | tig0023619:41435-41454 | Msa1410180:CDS | 35.0% | |
| TCAGAAATGGCGTCAAAATA+TGG | + | tig0023619:41489-41508 | Msa1410180:CDS | 35.0% | |
| AAGAAATTCTTGGAGAATGC+AGG | + | tig0023619:41532-41551 | Msa1410180:CDS | 35.0% | |
| TATCATCCAAATGTGGCTTT+GGG | - | tig0023619:41587-41606 | None:intergenic | 35.0% | |
| TTATCATCCAAATGTGGCTT+TGG | - | tig0023619:41588-41607 | None:intergenic | 35.0% | |
| AAAGCCACATTTGGATGATA+AGG | + | tig0023619:41587-41606 | Msa1410180:CDS | 35.0% | |
| AGGTATTAGGTATTTCCCTT+AGG | + | tig0023619:41607-41626 | Msa1410180:intron | 35.0% | |
| ATTCAAACCTAAATCGCTAC+TGG | - | tig0023619:41655-41674 | None:intergenic | 35.0% | |
| ACAAAATACCCTATGCTTGT+AGG | + | tig0023619:41823-41842 | Msa1410180:intron | 35.0% | |
| GCTTGTAGGTTATTGTATCT+TGG | + | tig0023619:41837-41856 | Msa1410180:intron | 35.0% | |
| TATTGTATCTTGGAATGGAC+TGG | + | tig0023619:41847-41866 | Msa1410180:CDS | 35.0% | |
| ! | TGGTTATCTCATCTTTTGCT+AGG | + | tig0023619:41867-41886 | Msa1410180:CDS | 35.0% |
| ! | GGTTATCTCATCTTTTGCTA+GGG | + | tig0023619:41868-41887 | Msa1410180:CDS | 35.0% |
| !! | TAGGGCTTCTAAGATTCTAA+AGG | + | tig0023619:41886-41905 | Msa1410180:CDS | 35.0% |
| !! | AGGGCTTCTAAGATTCTAAA+GGG | + | tig0023619:41887-41906 | Msa1410180:CDS | 35.0% |
| CGACACTTAATTAGGAAAAG+AGG | + | tig0023619:42058-42077 | Msa1410180:intron | 35.0% | |
| ! | TCCTCTTATTATGTTGCTTC+TGG | + | tig0023619:42149-42168 | Msa1410180:intron | 35.0% |
| TCCAGAAGCAACATAATAAG+AGG | - | tig0023619:42153-42172 | None:intergenic | 35.0% | |
| GGAATTTCACAATCAAAAGG+AGG | - | tig0023619:42373-42392 | None:intergenic | 35.0% | |
| GCTGGAATTTCACAATCAAA+AGG | - | tig0023619:42376-42395 | None:intergenic | 35.0% | |
| AATTTGGAGGTGAAATCAAC+TGG | + | tig0023619:42564-42583 | Msa1410180:CDS | 35.0% | |
| !!! | GTGAAATCAACTGGCTTTTA+TGG | + | tig0023619:42573-42592 | Msa1410180:CDS | 35.0% |
| ! | GGATACTTTGTTTCTTGACA+AGG | + | tig0023619:42704-42723 | Msa1410180:intron | 35.0% |
| ! | ACTTTGTTTCTTGACAAGGA+TGG | + | tig0023619:42708-42727 | Msa1410180:CDS | 35.0% |
| GGTGGGTATTTCAATAATAC+AGG | + | tig0023619:42732-42751 | Msa1410180:CDS | 35.0% | |
| TCTCCGCGTTAAATCTTATA+AGG | + | tig0023619:42823-42842 | Msa1410180:CDS | 35.0% | |
| CGCGTTAAATCTTATAAGGT+TGG | + | tig0023619:42827-42846 | Msa1410180:CDS | 35.0% | |
| !! | TCTTATAAGGTTGGCTTCAT+TGG | + | tig0023619:42836-42855 | Msa1410180:CDS | 35.0% |
| !!! | GTTTTTTCATGAGGAAAGAG+AGG | - | tig0023619:42926-42945 | None:intergenic | 35.0% |
| !!! | GGAGAAACTGTTTTTTCATG+AGG | - | tig0023619:42935-42954 | None:intergenic | 35.0% |
| TAGATCAGTTGCAACTAACT+AGG | + | tig0023619:43020-43039 | Msa1410180:intron | 35.0% | |
| AAGATTGAAAGATACGGCTA+TGG | + | tig0023619:43080-43099 | Msa1410180:CDS | 35.0% | |
| AAGCATGCTTTCAAATTCCT+CGG | - | tig0023619:43187-43206 | None:intergenic | 35.0% | |
| ACTTCACTCACTGTTCTATT+GGG | - | tig0023619:43234-43253 | None:intergenic | 35.0% | |
| AACTTCACTCACTGTTCTAT+TGG | - | tig0023619:43235-43254 | None:intergenic | 35.0% | |
| !! | CTTTGTTGTTGGGATCTATA+TGG | - | tig0023619:43337-43356 | None:intergenic | 35.0% |
| !! | TCCATCTCTTCTTTGTTGTT+GGG | - | tig0023619:43347-43366 | None:intergenic | 35.0% |
| ! | ATCCATCTCTTCTTTGTTGT+TGG | - | tig0023619:43348-43367 | None:intergenic | 35.0% |
| GAATAACTATTCATGCAGCA+AGG | + | tig0023619:43409-43428 | Msa1410180:CDS | 35.0% | |
| TATGTATACCATTACCAAGC+GGG | - | tig0023619:43540-43559 | None:intergenic | 35.0% | |
| TTACAAATCACTCTACTCCA+TGG | - | tig0023619:43610-43629 | None:intergenic | 35.0% | |
| ! | AGTAGACATTCCAAGTGTTG+AGG | + | tig0023619:37035-37054 | Msa1410180:five_prime_UTR | 40.0% |
| ! | TTTGTTGTAGTGGTGGTGAA+GGG | - | tig0023619:37267-37286 | None:intergenic | 40.0% |
| !! | TTTTGTTGTAGTGGTGGTGA+AGG | - | tig0023619:37268-37287 | None:intergenic | 40.0% |
| GTAACGCGTGAGAATTTGAA+AGG | - | tig0023619:37300-37319 | None:intergenic | 40.0% | |
| CATTGATAGAACCTTGGGAA+GGG | - | tig0023619:37322-37341 | None:intergenic | 40.0% | |
| GTAGCCATTGATAGAACCTT+GGG | - | tig0023619:37327-37346 | None:intergenic | 40.0% | |
| TGTAGCCATTGATAGAACCT+TGG | - | tig0023619:37328-37347 | None:intergenic | 40.0% | |
| !! | AAGATAAGGGCTTTGTTCTG+AGG | - | tig0023619:37391-37410 | None:intergenic | 40.0% |
| GAGCGTGTTGAAGAAGATAA+GGG | - | tig0023619:37404-37423 | None:intergenic | 40.0% | |
| TGAGCGTGTTGAAGAAGATA+AGG | - | tig0023619:37405-37424 | None:intergenic | 40.0% | |
| ! | AAGGTTGATTGGTATCCATG+GGG | + | tig0023619:37526-37545 | Msa1410180:intron | 40.0% |
| ATCACCACATACAAAACCAG+AGG | - | tig0023619:37896-37915 | None:intergenic | 40.0% | |
| !!! | TGGTTTTGTATGTGGTGATG+TGG | + | tig0023619:37897-37916 | Msa1410180:intron | 40.0% |
| ! | TATGGAGGTTGAGTCTTTTG+AGG | + | tig0023619:38063-38082 | Msa1410180:CDS | 40.0% |
| !! | GTTGAGTCTTTTGAGGATGA+GGG | + | tig0023619:38070-38089 | Msa1410180:CDS | 40.0% |
| TCCATACCAATGCTTCCAAT+AGG | + | tig0023619:38221-38240 | Msa1410180:intron | 40.0% | |
| !! | ACCTATTGGAAGCATTGGTA+TGG | - | tig0023619:38225-38244 | None:intergenic | 40.0% |
| ATACCAATGCTTCCAATAGG+TGG | + | tig0023619:38224-38243 | Msa1410180:intron | 40.0% | |
| ! | ACCCGACTTGAAACCTTTAA+TGG | + | tig0023619:38613-38632 | Msa1410180:CDS | 40.0% |
| ! | CCCATTAAAGGTTTCAAGTC+GGG | - | tig0023619:38617-38636 | None:intergenic | 40.0% |
| ! | CCCGACTTGAAACCTTTAAT+GGG | + | tig0023619:38614-38633 | Msa1410180:CDS | 40.0% |
| GACTTGAAACCTTTAATGGG+TGG | + | tig0023619:38617-38636 | Msa1410180:CDS | 40.0% | |
| ! | GTATAGTCTTAAATCCAGGC+CGG | - | tig0023619:38673-38692 | None:intergenic | 40.0% |
| GCTCTCGTTCTCAATAACTT+CGG | + | tig0023619:38742-38761 | Msa1410180:intron | 40.0% | |
| CAGAAAGGTAAAAGAGGCTT+GGG | + | tig0023619:38880-38899 | Msa1410180:intron | 40.0% | |
| AAGAGGCTTGGGAAAATAAG+AGG | + | tig0023619:38891-38910 | Msa1410180:CDS | 40.0% | |
| AGAGGCTTGGGAAAATAAGA+GGG | + | tig0023619:38892-38911 | Msa1410180:CDS | 40.0% | |
| AGGGATATGCTAGTTAAGAG+TGG | + | tig0023619:38911-38930 | Msa1410180:CDS | 40.0% | |
| TGCAATTGAACAGCTTTCTG+AGG | + | tig0023619:38940-38959 | Msa1410180:CDS | 40.0% | |
| CTTGTGTCTAAGAAATGGAG+GGG | - | tig0023619:39108-39127 | None:intergenic | 40.0% | |
| CCTTGTGTCTAAGAAATGGA+GGG | - | tig0023619:39109-39128 | None:intergenic | 40.0% | |
| CCTCCATTTCTTAGACACAA+GGG | + | tig0023619:39107-39126 | Msa1410180:intron | 40.0% | |
| CTTAGACACAAGGGAATGTA+AGG | + | tig0023619:39116-39135 | Msa1410180:intron | 40.0% | |
| CACAAGGGAATGTAAGGAAA+AGG | + | tig0023619:39122-39141 | Msa1410180:intron | 40.0% | |
| AACTATGACTCAGAATACGG+TGG | + | tig0023619:39361-39380 | Msa1410180:CDS | 40.0% | |
| TGCACCAAAATTTCCAAGAC+CGG | + | tig0023619:39393-39412 | Msa1410180:CDS | 40.0% | |
| ! | TCAACCGGTCTTGGAAATTT+TGG | - | tig0023619:39400-39419 | None:intergenic | 40.0% |
| !! | AGCATCAAGTTGATCTCAAC+CGG | - | tig0023619:39415-39434 | None:intergenic | 40.0% |
| GAGGATACCGAAAAGTTAGA+TGG | + | tig0023619:39454-39473 | Msa1410180:CDS | 40.0% | |
| CTCAAAATGTGGAACTGCAA+GGG | - | tig0023619:39778-39797 | None:intergenic | 40.0% | |
| TCTCAAAATGTGGAACTGCA+AGG | - | tig0023619:39779-39798 | None:intergenic | 40.0% | |
| TTTGCTGGTCCATACGTAAA+AGG | - | tig0023619:40003-40022 | None:intergenic | 40.0% | |
| TATGTTGTGCTACACAACCT+TGG | + | tig0023619:40264-40283 | Msa1410180:intron | 40.0% | |
| TTTAATAGGAATGGGAGGGT+AGG | + | tig0023619:40321-40340 | Msa1410180:intron | 40.0% | |
| AGGGTAGGCTTTGCTTAAAT+AGG | + | tig0023619:40336-40355 | Msa1410180:intron | 40.0% | |
| AGGCTTTGCTTAAATAGGTC+AGG | + | tig0023619:40341-40360 | Msa1410180:intron | 40.0% | |
| !!! | CATAAGCTTGTTTTTAGGCC+TGG | + | tig0023619:40410-40429 | Msa1410180:intron | 40.0% |
| TTTAAACATGCTAACAGGCC+AGG | - | tig0023619:40431-40450 | None:intergenic | 40.0% | |
| TGGCCTGTTAGCATGTTTAA+AGG | + | tig0023619:40430-40449 | Msa1410180:intron | 40.0% | |
| CTTCATATTATGCTGGGAGT+AGG | - | tig0023619:40570-40589 | None:intergenic | 40.0% | |
| GAGGATCACTCATTTCAGAT+AGG | - | tig0023619:41422-41441 | None:intergenic | 40.0% | |
| GAATGTCCTGATTGAGAGAA+AGG | + | tig0023619:41461-41480 | Msa1410180:CDS | 40.0% | |
| AAGAGTCCTTTCTCTCAATC+AGG | - | tig0023619:41470-41489 | None:intergenic | 40.0% | |
| GAGAAAGGACTCTTCAGAAA+TGG | + | tig0023619:41476-41495 | Msa1410180:CDS | 40.0% | |
| ! | GGCGTAAGTTGTTTGAAGTA+AGG | + | tig0023619:41553-41572 | Msa1410180:CDS | 40.0% |
| AAGTGAGTTGCTCACTTTAG+AGG | - | tig0023619:41692-41711 | None:intergenic | 40.0% | |
| CTAAAGTGAGCAACTCACTT+AGG | + | tig0023619:41692-41711 | Msa1410180:intron | 40.0% | |
| ! | ATTCTAAAGGGTGAAGCTGA+AGG | + | tig0023619:41899-41918 | Msa1410180:CDS | 40.0% |
| CAAAAGCCCGACACTTAATT+AGG | + | tig0023619:42050-42069 | Msa1410180:intron | 40.0% | |
| !! | TGGTTTCTGGCTTTCTTGAT+GGG | + | tig0023619:42249-42268 | Msa1410180:intron | 40.0% |
| GTATGAAGAAATTGTGGGTG+AGG | + | tig0023619:42287-42306 | Msa1410180:intron | 40.0% | |
| GATTGTGAAATTCCAGCCAA+AGG | + | tig0023619:42379-42398 | Msa1410180:intron | 40.0% | |
| GCTATTCTCAAGTACTCCTT+TGG | - | tig0023619:42398-42417 | None:intergenic | 40.0% | |
| GCATAATCATCCAAGAAACC+AGG | - | tig0023619:42512-42531 | None:intergenic | 40.0% | |
| CTCGATCTCTATGAATTTGG+AGG | + | tig0023619:42551-42570 | Msa1410180:CDS | 40.0% | |
| TTTATGGGCCATTGAATTGC+AGG | + | tig0023619:42589-42608 | Msa1410180:CDS | 40.0% | |
| CCAGACATCAATCTTTACCT+GGG | - | tig0023619:42618-42637 | None:intergenic | 40.0% | |
| TCCAGACATCAATCTTTACC+TGG | - | tig0023619:42619-42638 | None:intergenic | 40.0% | |
| AGATTGATGTCTGGACTTGA+TGG | + | tig0023619:42624-42643 | Msa1410180:intron | 40.0% | |
| TCTGGACTTGATGGAAGTTT+CGG | + | tig0023619:42633-42652 | Msa1410180:intron | 40.0% | |
| TAATGAGATGAACTGCTTGC+AGG | + | tig0023619:42683-42702 | Msa1410180:intron | 40.0% | |
| ! | TTGTTTCTTGACAAGGATGG+TGG | + | tig0023619:42711-42730 | Msa1410180:CDS | 40.0% |
| TGAGCATTATAAGCGAAACG+CGG | + | tig0023619:42875-42894 | Msa1410180:CDS | 40.0% | |
| TTTCATGAGGAAAGAGAGGA+GGG | - | tig0023619:42922-42941 | None:intergenic | 40.0% | |
| ! | TTTTCATGAGGAAAGAGAGG+AGG | - | tig0023619:42923-42942 | None:intergenic | 40.0% |
| ATCCAACTAGCGCATAAACA+AGG | - | tig0023619:42956-42975 | None:intergenic | 40.0% | |
| TGTTTATGCGCTAGTTGGAT+AGG | + | tig0023619:42956-42975 | Msa1410180:intron | 40.0% | |
| TTCCCTTTAAACGGTATTGC+AGG | + | tig0023619:43044-43063 | Msa1410180:intron | 40.0% | |
| TGCCTGCAATACCGTTTAAA+GGG | - | tig0023619:43049-43068 | None:intergenic | 40.0% | |
| ATTGAAAGATACGGCTATGG+CGG | + | tig0023619:43083-43102 | Msa1410180:CDS | 40.0% | |
| TCTGCTGCACAACACATTAA+AGG | - | tig0023619:43111-43130 | None:intergenic | 40.0% | |
| ! | AATGTCTCCATGTTTCTGCA+TGG | + | tig0023619:43269-43288 | Msa1410180:intron | 40.0% |
| TTGACAACCATGCAGAAACA+TGG | - | tig0023619:43279-43298 | None:intergenic | 40.0% | |
| !! | TTTGCGTTGGTGTTAATTGC+AGG | + | tig0023619:43307-43326 | Msa1410180:intron | 40.0% |
| TCCCAACAACAAAGAAGAGA+TGG | + | tig0023619:43343-43362 | Msa1410180:CDS | 40.0% | |
| ATAGTAAATTTCTCCCCGCT+TGG | + | tig0023619:43523-43542 | Msa1410180:exon | 40.0% | |
| ATGTATACCATTACCAAGCG+GGG | - | tig0023619:43539-43558 | None:intergenic | 40.0% | |
| !! | AAAGTAGGTGTTGTTCTCCA+TGG | + | tig0023619:43590-43609 | Msa1410180:three_prime_UTR | 40.0% |
| ATTTCAAAACTCTTGTGCGC+AGG | - | tig0023619:43651-43670 | None:intergenic | 40.0% | |
| CATGTACTCTCCTCAACACT+TGG | - | tig0023619:37048-37067 | None:intergenic | 45.0% | |
| !! | CAAGTGTTGAGGAGAGTACA+TGG | + | tig0023619:37046-37065 | Msa1410180:five_prime_UTR | 45.0% |
| TGTTTCGAACTCCAAGTCCT+TGG | - | tig0023619:37079-37098 | None:intergenic | 45.0% | |
| ! | TGGTGAAGGGTAAGTGCTTT+TGG | - | tig0023619:37254-37273 | None:intergenic | 45.0% |
| CCATTGATAGAACCTTGGGA+AGG | - | tig0023619:37323-37342 | None:intergenic | 45.0% | |
| CCTTCCCAAGGTTCTATCAA+TGG | + | tig0023619:37320-37339 | Msa1410180:CDS | 45.0% | |
| !! | TTGTTCTGAGGCAAGTCGAT+TGG | - | tig0023619:37379-37398 | None:intergenic | 45.0% |
| !! | AGAAGATAGGAGCATCTCTG+CGG | - | tig0023619:37576-37595 | None:intergenic | 45.0% |
| TTGGGTACAGCACTTGTCAT+TGG | + | tig0023619:37944-37963 | Msa1410180:CDS | 45.0% | |
| GCACTTGTCATTGGTATGTG+TGG | + | tig0023619:37953-37972 | Msa1410180:intron | 45.0% | |
| !! | GGTTGAGTCTTTTGAGGATG+AGG | + | tig0023619:38069-38088 | Msa1410180:CDS | 45.0% |
| !! | GGAAGCATTGGTATGGAACA+AGG | - | tig0023619:38218-38237 | None:intergenic | 45.0% |
| ! | GATCCACCTATTGGAAGCAT+TGG | - | tig0023619:38230-38249 | None:intergenic | 45.0% |
| GGTATACATGACGTATGTGC+AGG | + | tig0023619:38547-38566 | Msa1410180:intron | 45.0% | |
| ! | ACGTATGTGCAGGCTTTGTA+TGG | + | tig0023619:38557-38576 | Msa1410180:CDS | 45.0% |
| ! | TATGTGCAGGCTTTGTATGG+TGG | + | tig0023619:38560-38579 | Msa1410180:CDS | 45.0% |
| GGTGAAAGAAACACAGTCAG+GGG | - | tig0023619:38596-38615 | None:intergenic | 45.0% | |
| GGGTGAAAGAAACACAGTCA+GGG | - | tig0023619:38597-38616 | None:intergenic | 45.0% | |
| CGGCCATATTTATCTTCAGG+GGG | - | tig0023619:38653-38672 | None:intergenic | 45.0% | |
| CCGGCCATATTTATCTTCAG+GGG | - | tig0023619:38654-38673 | None:intergenic | 45.0% | |
| CCCCTGAAGATAAATATGGC+CGG | + | tig0023619:38651-38670 | Msa1410180:CDS | 45.0% | |
| GCCGGCCATATTTATCTTCA+GGG | - | tig0023619:38655-38674 | None:intergenic | 45.0% | |
| CTCGTTCTCAATAACTTCGG+TGG | + | tig0023619:38745-38764 | Msa1410180:intron | 45.0% | |
| ! | CCAAGCCTCTTTTACCTTTC+TGG | - | tig0023619:38882-38901 | None:intergenic | 45.0% |
| CCAGAAAGGTAAAAGAGGCT+TGG | + | tig0023619:38879-38898 | Msa1410180:intron | 45.0% | |
| GCATCTTCAGAAACACCATC+AGG | - | tig0023619:38998-39017 | None:intergenic | 45.0% | |
| ATTACGTCTATGCTCAGAGC+AGG | + | tig0023619:39018-39037 | Msa1410180:CDS | 45.0% | |
| CCCTCCATTTCTTAGACACA+AGG | + | tig0023619:39106-39125 | Msa1410180:intron | 45.0% | |
| CCCTTGTGTCTAAGAAATGG+AGG | - | tig0023619:39110-39129 | None:intergenic | 45.0% | |
| TATGAGGAACAGGGGAAAGT+AGG | + | tig0023619:39200-39219 | Msa1410180:intron | 45.0% | |
| ATGAGGAACAGGGGAAAGTA+GGG | + | tig0023619:39201-39220 | Msa1410180:intron | 45.0% | |
| ! | GACTCAGAATACGGTGGTTT+TGG | + | tig0023619:39367-39386 | Msa1410180:CDS | 45.0% |
| ! | AAGTTGATCTCAACCGGTCT+TGG | - | tig0023619:39409-39428 | None:intergenic | 45.0% |
| ACCTTGCAATGCATGGCAAA+AGG | + | tig0023619:39508-39527 | Msa1410180:CDS | 45.0% | |
| ! | TCCTTTTGCCATGCATTGCA+AGG | - | tig0023619:39512-39531 | None:intergenic | 45.0% |
| TTGCAATGCATGGCAAAAGG+AGG | + | tig0023619:39511-39530 | Msa1410180:CDS | 45.0% | |
| AGGGTTTCACAGATATAGCG+TGG | + | tig0023619:39555-39574 | Msa1410180:CDS | 45.0% | |
| GATATAGCGTGGATGAATGC+TGG | + | tig0023619:39566-39585 | Msa1410180:CDS | 45.0% | |
| GGGATATCCTGGACTATTTG+AGG | + | tig0023619:39886-39905 | Msa1410180:CDS | 45.0% | |
| TGTCTCTCCTCAAATAGTCC+AGG | - | tig0023619:39896-39915 | None:intergenic | 45.0% | |
| ! | AGAGACATGATTGGTCCAGA+AGG | + | tig0023619:39909-39928 | Msa1410180:CDS | 45.0% |
| TGAAGGGGATACGCGAAAAA+AGG | + | tig0023619:39971-39990 | Msa1410180:CDS | 45.0% | |
| ! | AGGAAGGAGCCTTTTACGTA+TGG | + | tig0023619:39991-40010 | Msa1410180:CDS | 45.0% |
| TTACGTATGGACCAGCAAAG+AGG | + | tig0023619:40004-40023 | Msa1410180:CDS | 45.0% | |
| TGAATGACAGACCTCTTTGC+TGG | - | tig0023619:40018-40037 | None:intergenic | 45.0% | |
| AAGTGCGTTCAAGCGCTAAT+AGG | + | tig0023619:40481-40500 | Msa1410180:intron | 45.0% | |
| CGTCAAGGCATGATAAGTGA+GGG | + | tig0023619:40623-40642 | Msa1410180:intron | 45.0% | |
| AAGTGAGGGTCGAAATTGAG+TGG | + | tig0023619:40637-40656 | Msa1410180:intron | 45.0% | |
| AGTGAGGGTCGAAATTGAGT+GGG | + | tig0023619:40638-40657 | Msa1410180:intron | 45.0% | |
| TTACGGACCAAGCCTACATT+AGG | - | tig0023619:41066-41085 | None:intergenic | 45.0% | |
| TCAGGCTATCTACGGGATTA+CGG | - | tig0023619:41083-41102 | None:intergenic | 45.0% | |
| ! | AGAGCATGCTGCTCTTTTTG+AGG | + | tig0023619:41362-41381 | Msa1410180:CDS | 45.0% |
| CAAACCTAAATCGCTACTGG+TGG | - | tig0023619:41652-41671 | None:intergenic | 45.0% | |
| ! | TTCTTGCTTTGGACAACGAG+TGG | + | tig0023619:42229-42248 | Msa1410180:intron | 45.0% |
| TTTGGACAACGAGTGGTTTC+TGG | + | tig0023619:42236-42255 | Msa1410180:intron | 45.0% | |
| !! | GTGGTTTCTGGCTTTCTTGA+TGG | + | tig0023619:42248-42267 | Msa1410180:intron | 45.0% |
| AAATTGTGGGTGAGGCTGTT+GGG | + | tig0023619:42295-42314 | Msa1410180:intron | 45.0% | |
| TTCTCAAGTACTCCTTTGGC+TGG | - | tig0023619:42394-42413 | None:intergenic | 45.0% | |
| AATTCTCCATCCAAAGCTCC+TGG | + | tig0023619:42491-42510 | Msa1410180:CDS | 45.0% | |
| !! | AAGAAACCAGGAGCTTTGGA+TGG | - | tig0023619:42500-42519 | None:intergenic | 45.0% |
| ATCCAAAGCTCCTGGTTTCT+TGG | + | tig0023619:42499-42518 | Msa1410180:CDS | 45.0% | |
| ATCCAAGAAACCAGGAGCTT+TGG | - | tig0023619:42504-42523 | None:intergenic | 45.0% | |
| CTGGGTTTCCTGCAATTCAA+TGG | - | tig0023619:42600-42619 | None:intergenic | 45.0% | |
| CATTGAATTGCAGGAAACCC+AGG | + | tig0023619:42598-42617 | Msa1410180:CDS | 45.0% | |
| CCCAGGTAAAGATTGATGTC+TGG | + | tig0023619:42615-42634 | Msa1410180:intron | 45.0% | |
| ! | GTTTCGGTGATTTTCTTGCC+AGG | + | tig0023619:42649-42668 | Msa1410180:intron | 45.0% |
| CTCATTAGCAACAGAAGTCC+TGG | - | tig0023619:42670-42689 | None:intergenic | 45.0% | |
| ! | TTTCTTGACAAGGATGGTGG+TGG | + | tig0023619:42714-42733 | Msa1410180:CDS | 45.0% |
| ! | TTCTTGACAAGGATGGTGGT+GGG | + | tig0023619:42715-42734 | Msa1410180:CDS | 45.0% |
| CGTCATGATCTTCCTTCACA+CGG | - | tig0023619:42779-42798 | None:intergenic | 45.0% | |
| CGTGTGAAGGAAGATCATGA+CGG | + | tig0023619:42777-42796 | Msa1410180:CDS | 45.0% | |
| GTGTGAAGGAAGATCATGAC+GGG | + | tig0023619:42778-42797 | Msa1410180:CDS | 45.0% | |
| TGTGAAGGAAGATCATGACG+GGG | + | tig0023619:42779-42798 | Msa1410180:CDS | 45.0% | |
| !! | AGGTTGGCTTCATTGGTTTC+TGG | + | tig0023619:42843-42862 | Msa1410180:CDS | 45.0% |
| TTCATGAGGAAAGAGAGGAG+GGG | - | tig0023619:42921-42940 | None:intergenic | 45.0% | |
| ! | CTCCTTGTTTATGCGCTAGT+TGG | + | tig0023619:42951-42970 | Msa1410180:intron | 45.0% |
| CAACTGATCTAGTGATCACC+TGG | - | tig0023619:43011-43030 | None:intergenic | 45.0% | |
| CTGCCTGCAATACCGTTTAA+AGG | - | tig0023619:43050-43069 | None:intergenic | 45.0% | |
| ! | GGGCACTACAAGTGAAGTTT+TGG | - | tig0023619:43451-43470 | None:intergenic | 45.0% |
| AATTTCTCCCCGCTTGGTAA+TGG | + | tig0023619:43529-43548 | Msa1410180:three_prime_UTR | 45.0% | |
| !!! | GTCACATTGTGGTTTTGGTC+CGG | + | tig0023619:43803-43822 | Msa1410180:three_prime_UTR | 45.0% |
| !! | AAAAAATAAAAATGAAATTA+GGG | - | tig0023619:37455-37474 | None:intergenic | 5.0% |
| !! | AAAAAAATAAAAATGAAATT+AGG | - | tig0023619:37456-37475 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAACTAAATT+AGG | - | tig0023619:37627-37646 | None:intergenic | 5.0% |
| !! | TTATATAAGTATAAATTAAA+TGG | - | tig0023619:38292-38311 | None:intergenic | 5.0% |
| !!! | ATTTAATTTATACTTATATA+AGG | + | tig0023619:38291-38310 | Msa1410180:intron | 5.0% |
| !! | ATAAAAGTTTATTAAATTTA+AGG | + | tig0023619:39260-39279 | Msa1410180:intron | 5.0% |
| GAGTACATGGCAACTCACCA+AGG | + | tig0023619:37059-37078 | Msa1410180:five_prime_UTR | 50.0% | |
| ATGGCAACTCACCAAGGACT+TGG | + | tig0023619:37065-37084 | Msa1410180:five_prime_UTR | 50.0% | |
| CTTCCAATAGGTGGATCGAG+AGG | + | tig0023619:38233-38252 | Msa1410180:intron | 50.0% | |
| GGAGCGACCAGATGTTGATA+AGG | + | tig0023619:38254-38273 | Msa1410180:CDS | 50.0% | |
| ! | CTTTGTATGGTGGAGGAGGT+TGG | + | tig0023619:38570-38589 | Msa1410180:CDS | 50.0% |
| CGGGTGAAAGAAACACAGTC+AGG | - | tig0023619:38598-38617 | None:intergenic | 50.0% | |
| GGCCGGCCATATTTATCTTC+AGG | - | tig0023619:38656-38675 | None:intergenic | 50.0% | |
| GAAGATAAATATGGCCGGCC+TGG | + | tig0023619:38656-38675 | Msa1410180:CDS | 50.0% | |
| GTCTATGCTCAGAGCAGGTA+AGG | + | tig0023619:39023-39042 | Msa1410180:intron | 50.0% | |
| GCAGGTAAGGCTATGTGCAT+CGG | + | tig0023619:39036-39055 | Msa1410180:intron | 50.0% | |
| TCCACGATCATGTTGGAGGA+GGG | + | tig0023619:39536-39555 | Msa1410180:CDS | 50.0% | |
| CTGACAGTGCGGAGAATGAA+GGG | + | tig0023619:39955-39974 | Msa1410180:CDS | 50.0% | |
| TGACAGTGCGGAGAATGAAG+GGG | + | tig0023619:39956-39975 | Msa1410180:CDS | 50.0% | |
| GGGGATACGCGAAAAAAGGA+AGG | + | tig0023619:39975-39994 | Msa1410180:CDS | 50.0% | |
| CAAGCGCTAATAGGCGAACA+TGG | + | tig0023619:40490-40509 | Msa1410180:intron | 50.0% | |
| ! | GGTCAAGTAGTGGAGTGATG+AGG | + | tig0023619:40527-40546 | Msa1410180:intron | 50.0% |
| ! | CAAGTAGTGGAGTGATGAGG+AGG | + | tig0023619:40530-40549 | Msa1410180:intron | 50.0% |
| GCGTCAAGGCATGATAAGTG+AGG | + | tig0023619:40622-40641 | Msa1410180:intron | 50.0% | |
| CTAGCTGCCTAATGTAGGCT+TGG | + | tig0023619:41056-41075 | Msa1410180:intron | 50.0% | |
| GGTTCCACCAGTAGCGATTT+AGG | + | tig0023619:41645-41664 | Msa1410180:intron | 50.0% | |
| !! | CTTACTTCAGTGCCGACAAC+AGG | - | tig0023619:41941-41960 | None:intergenic | 50.0% |
| GAAATTGTGGGTGAGGCTGT+TGG | + | tig0023619:42294-42313 | Msa1410180:intron | 50.0% | |
| TTCGGTTCTTCTCCGTGTGA+AGG | + | tig0023619:42764-42783 | Msa1410180:CDS | 50.0% | |
| TGTACCTTCCCGTAAGCAAG+TGG | + | tig0023619:43140-43159 | Msa1410180:CDS | 50.0% | |
| AGTACCACTTGCTTACGGGA+AGG | - | tig0023619:43147-43166 | None:intergenic | 50.0% | |
| TTCCCGTAAGCAAGTGGTAC+TGG | + | tig0023619:43146-43165 | Msa1410180:CDS | 50.0% | |
| CACCAGTACCACTTGCTTAC+GGG | - | tig0023619:43151-43170 | None:intergenic | 50.0% | |
| CCACCAGTACCACTTGCTTA+CGG | - | tig0023619:43152-43171 | None:intergenic | 50.0% | |
| !! | CGTAAGCAAGTGGTACTGGT+GGG | + | tig0023619:43150-43169 | Msa1410180:CDS | 50.0% |
| !! | AAGTGGTACTGGTGGGTGAA+AGG | + | tig0023619:43157-43176 | Msa1410180:CDS | 50.0% |
| CGACGAATGATCAGTGACAG+GGG | - | tig0023619:43471-43490 | None:intergenic | 50.0% | |
| GCGACGAATGATCAGTGACA+GGG | - | tig0023619:43472-43491 | None:intergenic | 50.0% | |
| AGCGACGAATGATCAGTGAC+AGG | - | tig0023619:43473-43492 | None:intergenic | 50.0% | |
| GCGAAAGCTTCTTCACCCCA+TGG | - | tig0023619:37544-37563 | None:intergenic | 55.0% | |
| GCTCCTCTCGATCCACCTAT+TGG | - | tig0023619:38239-38258 | None:intergenic | 55.0% | |
| ! | GTGCAGGCTTTGTATGGTGG+AGG | + | tig0023619:38563-38582 | Msa1410180:CDS | 55.0% |
| ! | CAGGCTTTGTATGGTGGAGG+AGG | + | tig0023619:38566-38585 | Msa1410180:CDS | 55.0% |
| GTCCACGATCATGTTGGAGG+AGG | + | tig0023619:39535-39554 | Msa1410180:CDS | 55.0% | |
| ACCCTCCTCCAACATGATCG+TGG | - | tig0023619:39540-39559 | None:intergenic | 55.0% | |
| AGCGTGGATGAATGCTGGCA+TGG | + | tig0023619:39571-39590 | Msa1410180:CDS | 55.0% | |
| AGCAGAGGATGCTGACAGTG+CGG | + | tig0023619:39944-39963 | Msa1410180:CDS | 55.0% | |
| GCTGACAGTGCGGAGAATGA+AGG | + | tig0023619:39954-39973 | Msa1410180:CDS | 55.0% | |
| ! | GTAGTGGAGTGATGAGGAGG+TGG | + | tig0023619:40533-40552 | Msa1410180:intron | 55.0% |
| ! | GAAGCGCCCAAAGCCACATT+TGG | + | tig0023619:41578-41597 | Msa1410180:CDS | 55.0% |
| GCGAAACGCGGAACGTCTAT+TGG | + | tig0023619:42887-42906 | Msa1410180:CDS | 55.0% | |
| ! | CCGTAAGCAAGTGGTACTGG+TGG | + | tig0023619:43149-43168 | Msa1410180:CDS | 55.0% |
| CTCACGCGTTACCCTTCCCA+AGG | + | tig0023619:37308-37327 | Msa1410180:CDS | 60.0% | |
| !! | GGAGGCGTCCACGATCATGT+TGG | + | tig0023619:39529-39548 | Msa1410180:CDS | 60.0% |
| GGCGTCCACGATCATGTTGG+AGG | + | tig0023619:39532-39551 | Msa1410180:CDS | 60.0% | |
| ! | ATGACGGGGCAGAACCCTCA+GGG | + | tig0023619:42793-42812 | Msa1410180:CDS | 60.0% |
| GGCAGAACCCTCAGGGAACT+CGG | + | tig0023619:42800-42819 | Msa1410180:CDS | 60.0% | |
| GGTGGGTGAAAGGACTTCCG+AGG | + | tig0023619:43167-43186 | Msa1410180:CDS | 60.0% | |
| ! | CATGACGGGGCAGAACCCTC+AGG | + | tig0023619:42792-42811 | Msa1410180:CDS | 65.0% |
| GCGGAGACCGAGTTCCCTGA+GGG | - | tig0023619:42810-42829 | None:intergenic | 65.0% | |
| CGCGGAGACCGAGTTCCCTG+AGG | - | tig0023619:42811-42830 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023619 | gene | 37026 | 43827 | 37026 | ID=Msa1410180;Name=Msa1410180 |
| tig0023619 | mRNA | 37026 | 43827 | 37026 | ID=Msa1410180-mRNA-1;Parent=Msa1410180;Name=Msa1410180-mRNA-1;_AED=0.05;_eAED=0.05;_QI=175|1|1|1|1|1|15|301|801 |
| tig0023619 | exon | 37026 | 37431 | 37026 | ID=Msa1410180-mRNA-1:exon:26391;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 37529 | 37601 | 37529 | ID=Msa1410180-mRNA-1:exon:26392;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 37944 | 37965 | 37944 | ID=Msa1410180-mRNA-1:exon:26393;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 38054 | 38132 | 38054 | ID=Msa1410180-mRNA-1:exon:26394;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 38243 | 38275 | 38243 | ID=Msa1410180-mRNA-1:exon:26395;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 38548 | 38696 | 38548 | ID=Msa1410180-mRNA-1:exon:26396;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 38883 | 39039 | 38883 | ID=Msa1410180-mRNA-1:exon:26397;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 39352 | 39592 | 39352 | ID=Msa1410180-mRNA-1:exon:26398;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 39784 | 40025 | 39784 | ID=Msa1410180-mRNA-1:exon:26399;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 41345 | 41608 | 41345 | ID=Msa1410180-mRNA-1:exon:26400;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 41845 | 41955 | 41845 | ID=Msa1410180-mRNA-1:exon:26401;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 42395 | 42619 | 42395 | ID=Msa1410180-mRNA-1:exon:26402;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 42705 | 42908 | 42705 | ID=Msa1410180-mRNA-1:exon:26403;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 43066 | 43242 | 43066 | ID=Msa1410180-mRNA-1:exon:26404;Parent=Msa1410180-mRNA-1 |
| tig0023619 | exon | 43329 | 43827 | 43329 | ID=Msa1410180-mRNA-1:exon:26405;Parent=Msa1410180-mRNA-1 |
| tig0023619 | five_prime_UTR | 37026 | 37200 | 37026 | ID=Msa1410180-mRNA-1:five_prime_utr;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 37201 | 37431 | 37201 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 37529 | 37601 | 37529 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 37944 | 37965 | 37944 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 38054 | 38132 | 38054 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 38243 | 38275 | 38243 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 38548 | 38696 | 38548 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 38883 | 39039 | 38883 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 39352 | 39592 | 39352 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 39784 | 40025 | 39784 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 41345 | 41608 | 41345 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 41845 | 41955 | 41845 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 42395 | 42619 | 42395 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 42705 | 42908 | 42705 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 43066 | 43242 | 43066 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | CDS | 43329 | 43526 | 43329 | ID=Msa1410180-mRNA-1:cds;Parent=Msa1410180-mRNA-1 |
| tig0023619 | three_prime_UTR | 43527 | 43827 | 43527 | ID=Msa1410180-mRNA-1:three_prime_utr;Parent=Msa1410180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
