AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1214830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214830 MtrunA17_Chr4g0063871 99.123 114 1 0 1 114 1 114 4.41e-82 235
Msa1214830 MtrunA17_Chr2g0333071 39.252 107 61 3 11 114 8 113 9.37e-24 87.8
Msa1214830 MtrunA17_Chr3g0123851 39.286 84 38 2 43 114 39 121 7.93e-14 62.8
Msa1214830 MtrunA17_Chr4g0019101 37.755 98 45 4 19 114 79 162 2.92e-13 62.4
Msa1214830 MtrunA17_Chr5g0432501 32.710 107 58 3 11 114 41 136 4.64e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1214830 AT1G80133.1 29.661 118 60 3 1 114 1 99 1.55e-11 56.6

Find 46 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTATTTGCTTCTAATTT+AGG 0.129449 8_1:+75622415 Msa1214830:CDS
CATTGGTTGGAGGGGCTTAT+TGG 0.151048 8_1:+75623067 Msa1214830:three_prime_UTR
GTTTGGAATTAACTGCTATT+TGG 0.191429 8_1:-75622987 None:intergenic
AAAGACATAGTTGTTATATT+TGG 0.193293 8_1:-75622963 None:intergenic
AAAGAAATGAGAAGAAGTTT+TGG 0.239549 8_1:-75622298 None:intergenic
TCTTCTAGGTTCTAGCTATT+TGG 0.246087 8_1:+75622172 Msa1214830:five_prime_UTR
AGAACCTAGAAGAATTAATT+TGG 0.251989 8_1:-75622162 None:intergenic
AACGCCAAATTAATTCTTCT+AGG 0.270101 8_1:+75622158 Msa1214830:five_prime_UTR
AATTTCTAGTTAAATTTGTT+TGG 0.291501 8_1:-75623004 None:intergenic
ATTGGTTGGAGGGGCTTATT+GGG 0.330391 8_1:+75623068 Msa1214830:three_prime_UTR
TAGCTATATAACAACTTTCA+AGG 0.370965 8_1:-75622821 None:intergenic
TGGCTATATGCAATAGTAGT+AGG 0.390708 8_1:-75622255 None:intergenic
ATGCCAATGCCACTATATCT+TGG 0.404751 8_1:-75622868 None:intergenic
TTTGTAGTAATAGTATGAAA+TGG 0.410391 8_1:+75622938 Msa1214830:three_prime_UTR
GAAGAAATATCATAGAAGTA+AGG 0.411774 8_1:+75622589 Msa1214830:CDS
AATCAAAAGAAATCAGTATT+GGG 0.417315 8_1:+75622620 Msa1214830:CDS
TTTGGGAGAAAGAGAAAGGA+AGG 0.446803 8_1:-75622280 None:intergenic
TGCCAATGCCACTATATCTT+GGG 0.461271 8_1:-75622867 None:intergenic
AAATCAAAAGAAATCAGTAT+TGG 0.464047 8_1:+75622619 Msa1214830:CDS
ATTTCTCCTCATCACAAAGT+TGG 0.472056 8_1:+75622707 Msa1214830:CDS
ATAATTTCAAAAGTTAGCAT+AGG 0.495740 8_1:+75622016 Msa1214830:five_prime_UTR
TGCCCAAGATATAGTGGCAT+TGG 0.497331 8_1:+75622865 Msa1214830:three_prime_UTR
GTGGAGTGGCAAACATTGGT+TGG 0.510429 8_1:+75623054 Msa1214830:three_prime_UTR
AAGAAATATCATAGAAGTAA+GGG 0.517623 8_1:+75622590 Msa1214830:CDS
AAGCATTTGTTAACACACCT+TGG 0.520904 8_1:-75622653 None:intergenic
CTTGAATTGCAGACCTTGCA+TGG 0.526230 8_1:+75622673 Msa1214830:CDS
TTAGTTCAAATTTGGTGGAG+TGG 0.543403 8_1:+75623040 Msa1214830:three_prime_UTR
TAATTTCAAAAGTTAGCATA+GGG 0.544735 8_1:+75622017 Msa1214830:five_prime_UTR
GAGTGGCAAACATTGGTTGG+AGG 0.548658 8_1:+75623057 Msa1214830:three_prime_UTR
GGCTATATGCAATAGTAGTA+GGG 0.553625 8_1:-75622254 None:intergenic
AGTGGCAAACATTGGTTGGA+GGG 0.556976 8_1:+75623058 Msa1214830:three_prime_UTR
AGGGATACTATCTTATGTCA+TGG 0.560784 8_1:+75622768 Msa1214830:CDS
CATTTGTTAACACACCTTGG+AGG 0.562627 8_1:-75622650 None:intergenic
TGTATGATGACAAAAGAAAG+AGG 0.563682 8_1:+75621978 Msa1214830:five_prime_UTR
ATATTGTGCCCAAGATATAG+TGG 0.570965 8_1:+75622859 Msa1214830:three_prime_UTR
TTCAGCCAGCAAAAGATGAA+AGG 0.571863 8_1:+75622047 Msa1214830:five_prime_UTR
GAGAAAGAGAAAGGAAGGAA+TGG 0.578947 8_1:-75622275 None:intergenic
GTGGCAAACATTGGTTGGAG+GGG 0.580609 8_1:+75623059 Msa1214830:three_prime_UTR
TCATACTATTACTACAAACA+AGG 0.614003 8_1:-75622933 None:intergenic
ATAACTAAAGTAGCCATGCA+AGG 0.616275 8_1:-75622686 None:intergenic
TTTGGTGGAGTGGCAAACAT+TGG 0.627477 8_1:+75623050 Msa1214830:three_prime_UTR
GTATGATGACAAAAGAAAGA+GGG 0.634261 8_1:+75621979 Msa1214830:five_prime_UTR
ATTTGACCAACTTTGTGATG+AGG 0.636465 8_1:-75622713 None:intergenic
TAGGTAAGCTCACAGAGTTG+AGG 0.644476 8_1:-75622104 None:intergenic
TATTGGGATCAAGACCTCCA+AGG 0.671664 8_1:+75622636 Msa1214830:CDS
ATGTCATGGAAATGCAAGTG+TGG 0.695585 8_1:+75622782 Msa1214830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATAGCTATAAATTTTT+GGG + chr8_1:75622833-75622852 Msa1214830:three_prime_UTR 10.0%
!!! TTATATAGCTATAAATTTTT+GGG + chr8_1:75622833-75622852 Msa1214830:three_prime_UTR 10.0%
!!! GTTATATAGCTATAAATTTT+TGG + chr8_1:75622832-75622851 Msa1214830:three_prime_UTR 15.0%
!!! ATCTTTTAAACTATATACAT+AGG - chr8_1:75622895-75622914 None:intergenic 15.0%
!!! AATTTCTAGTTAAATTTGTT+TGG - chr8_1:75623007-75623026 None:intergenic 15.0%
!!! GTTATATAGCTATAAATTTT+TGG + chr8_1:75622832-75622851 Msa1214830:three_prime_UTR 15.0%
!!! ATCTTTTAAACTATATACAT+AGG - chr8_1:75622895-75622914 None:intergenic 15.0%
!!! AATTTCTAGTTAAATTTGTT+TGG - chr8_1:75623007-75623026 None:intergenic 15.0%
!! ATAATTTCAAAAGTTAGCAT+AGG + chr8_1:75622016-75622035 Msa1214830:five_prime_UTR 20.0%
!! TAATTTCAAAAGTTAGCATA+GGG + chr8_1:75622017-75622036 Msa1214830:five_prime_UTR 20.0%
!!! ACTTTATTTGCTTCTAATTT+AGG + chr8_1:75622415-75622434 Msa1214830:CDS 20.0%
!! AAGAAATATCATAGAAGTAA+GGG + chr8_1:75622590-75622609 Msa1214830:CDS 20.0%
!! AAATCAAAAGAAATCAGTAT+TGG + chr8_1:75622619-75622638 Msa1214830:CDS 20.0%
!! AATCAAAAGAAATCAGTATT+GGG + chr8_1:75622620-75622639 Msa1214830:CDS 20.0%
!! TTTGTAGTAATAGTATGAAA+TGG + chr8_1:75622938-75622957 Msa1214830:three_prime_UTR 20.0%
!! AAAGACATAGTTGTTATATT+TGG - chr8_1:75622966-75622985 None:intergenic 20.0%
!! ATAATTTCAAAAGTTAGCAT+AGG + chr8_1:75622016-75622035 Msa1214830:five_prime_UTR 20.0%
!! TAATTTCAAAAGTTAGCATA+GGG + chr8_1:75622017-75622036 Msa1214830:five_prime_UTR 20.0%
!!! ACTTTATTTGCTTCTAATTT+AGG + chr8_1:75622415-75622434 Msa1214830:CDS 20.0%
!! AAGAAATATCATAGAAGTAA+GGG + chr8_1:75622590-75622609 Msa1214830:CDS 20.0%
!! AAATCAAAAGAAATCAGTAT+TGG + chr8_1:75622619-75622638 Msa1214830:CDS 20.0%
!! AATCAAAAGAAATCAGTATT+GGG + chr8_1:75622620-75622639 Msa1214830:CDS 20.0%
!! TTTGTAGTAATAGTATGAAA+TGG + chr8_1:75622938-75622957 Msa1214830:three_prime_UTR 20.0%
!! AAAGACATAGTTGTTATATT+TGG - chr8_1:75622966-75622985 None:intergenic 20.0%
!!! TTTTAAGAGAAATAGAAGCT+AGG - chr8_1:75622126-75622145 None:intergenic 25.0%
! AGAACCTAGAAGAATTAATT+TGG - chr8_1:75622165-75622184 None:intergenic 25.0%
!! AAGAAATGAGAAGAAGTTTT+GGG - chr8_1:75622300-75622319 None:intergenic 25.0%
!! AAAGAAATGAGAAGAAGTTT+TGG - chr8_1:75622301-75622320 None:intergenic 25.0%
!! TTATACCGTTTTATATCTCT+TGG + chr8_1:75622511-75622530 Msa1214830:intron 25.0%
! TTAGACCAAGAGATATAAAA+CGG - chr8_1:75622519-75622538 None:intergenic 25.0%
! GAAGAAATATCATAGAAGTA+AGG + chr8_1:75622589-75622608 Msa1214830:CDS 25.0%
! TAGCTATATAACAACTTTCA+AGG - chr8_1:75622824-75622843 None:intergenic 25.0%
! TCATACTATTACTACAAACA+AGG - chr8_1:75622936-75622955 None:intergenic 25.0%
!!! GTTTGCTTTTAGTTCAAATT+TGG + chr8_1:75623032-75623051 Msa1214830:three_prime_UTR 25.0%
!!! TTTTAAGAGAAATAGAAGCT+AGG - chr8_1:75622126-75622145 None:intergenic 25.0%
! AGAACCTAGAAGAATTAATT+TGG - chr8_1:75622165-75622184 None:intergenic 25.0%
!! AAGAAATGAGAAGAAGTTTT+GGG - chr8_1:75622300-75622319 None:intergenic 25.0%
!! AAAGAAATGAGAAGAAGTTT+TGG - chr8_1:75622301-75622320 None:intergenic 25.0%
!! TTATACCGTTTTATATCTCT+TGG + chr8_1:75622511-75622530 Msa1214830:intron 25.0%
! TTAGACCAAGAGATATAAAA+CGG - chr8_1:75622519-75622538 None:intergenic 25.0%
! GAAGAAATATCATAGAAGTA+AGG + chr8_1:75622589-75622608 Msa1214830:CDS 25.0%
! TAGCTATATAACAACTTTCA+AGG - chr8_1:75622824-75622843 None:intergenic 25.0%
! TCATACTATTACTACAAACA+AGG - chr8_1:75622936-75622955 None:intergenic 25.0%
!!! GTTTGCTTTTAGTTCAAATT+TGG + chr8_1:75623032-75623051 Msa1214830:three_prime_UTR 25.0%
! CTTTCTTTTGTCATCATACA+AGG - chr8_1:75621978-75621997 None:intergenic 30.0%
TGTATGATGACAAAAGAAAG+AGG + chr8_1:75621978-75621997 Msa1214830:five_prime_UTR 30.0%
GTATGATGACAAAAGAAAGA+GGG + chr8_1:75621979-75621998 Msa1214830:five_prime_UTR 30.0%
AACGCCAAATTAATTCTTCT+AGG + chr8_1:75622158-75622177 Msa1214830:five_prime_UTR 30.0%
!! TGCATCTCATCAAGTTTTAA+GGG - chr8_1:75622200-75622219 None:intergenic 30.0%
! ATGCATCTCATCAAGTTTTA+AGG - chr8_1:75622201-75622220 None:intergenic 30.0%
!!! CTTTCTCTTTTTTACACTCA+TGG + chr8_1:75622327-75622346 Msa1214830:exon 30.0%
!! ATTGCTTTTCATTGAACAGA+AGG + chr8_1:75622554-75622573 Msa1214830:intron 30.0%
!! TTGCTTTTCATTGAACAGAA+GGG + chr8_1:75622555-75622574 Msa1214830:intron 30.0%
AATAACAGCTGAAAAAGATG+AGG + chr8_1:75622748-75622767 Msa1214830:CDS 30.0%
ATAACAGCTGAAAAAGATGA+GGG + chr8_1:75622749-75622768 Msa1214830:CDS 30.0%
! GTTTGGAATTAACTGCTATT+TGG - chr8_1:75622990-75623009 None:intergenic 30.0%
!!! TGCTTTTAGTTCAAATTTGG+TGG + chr8_1:75623035-75623054 Msa1214830:three_prime_UTR 30.0%
! CTTTCTTTTGTCATCATACA+AGG - chr8_1:75621978-75621997 None:intergenic 30.0%
TGTATGATGACAAAAGAAAG+AGG + chr8_1:75621978-75621997 Msa1214830:five_prime_UTR 30.0%
GTATGATGACAAAAGAAAGA+GGG + chr8_1:75621979-75621998 Msa1214830:five_prime_UTR 30.0%
AACGCCAAATTAATTCTTCT+AGG + chr8_1:75622158-75622177 Msa1214830:five_prime_UTR 30.0%
!! TGCATCTCATCAAGTTTTAA+GGG - chr8_1:75622200-75622219 None:intergenic 30.0%
! ATGCATCTCATCAAGTTTTA+AGG - chr8_1:75622201-75622220 None:intergenic 30.0%
!!! CTTTCTCTTTTTTACACTCA+TGG + chr8_1:75622327-75622346 Msa1214830:exon 30.0%
!! ATTGCTTTTCATTGAACAGA+AGG + chr8_1:75622554-75622573 Msa1214830:intron 30.0%
!! TTGCTTTTCATTGAACAGAA+GGG + chr8_1:75622555-75622574 Msa1214830:intron 30.0%
AATAACAGCTGAAAAAGATG+AGG + chr8_1:75622748-75622767 Msa1214830:CDS 30.0%
ATAACAGCTGAAAAAGATGA+GGG + chr8_1:75622749-75622768 Msa1214830:CDS 30.0%
! GTTTGGAATTAACTGCTATT+TGG - chr8_1:75622990-75623009 None:intergenic 30.0%
!!! TGCTTTTAGTTCAAATTTGG+TGG + chr8_1:75623035-75623054 Msa1214830:three_prime_UTR 30.0%
! TTTTGTCATCATACAAGGAG+TGG - chr8_1:75621973-75621992 None:intergenic 35.0%
! AGTTTCCTTTCATCTTTTGC+TGG - chr8_1:75622055-75622074 None:intergenic 35.0%
! TCTTCTAGGTTCTAGCTATT+TGG + chr8_1:75622172-75622191 Msa1214830:five_prime_UTR 35.0%
GGCTATATGCAATAGTAGTA+GGG - chr8_1:75622257-75622276 None:intergenic 35.0%
TGGCTATATGCAATAGTAGT+AGG - chr8_1:75622258-75622277 None:intergenic 35.0%
!!! AAGTTTTGGGAGAAAGAGAA+AGG - chr8_1:75622287-75622306 None:intergenic 35.0%
! AGTCTGCTGTGGTATATTTT+TGG - chr8_1:75622358-75622377 None:intergenic 35.0%
! AAGCATTTGTTAACACACCT+TGG - chr8_1:75622656-75622675 None:intergenic 35.0%
ATAACTAAAGTAGCCATGCA+AGG - chr8_1:75622689-75622708 None:intergenic 35.0%
ATTTCTCCTCATCACAAAGT+TGG + chr8_1:75622707-75622726 Msa1214830:CDS 35.0%
ATTTGACCAACTTTGTGATG+AGG - chr8_1:75622716-75622735 None:intergenic 35.0%
AGGGATACTATCTTATGTCA+TGG + chr8_1:75622768-75622787 Msa1214830:CDS 35.0%
ATATTGTGCCCAAGATATAG+TGG + chr8_1:75622859-75622878 Msa1214830:three_prime_UTR 35.0%
! TTAGTTCAAATTTGGTGGAG+TGG + chr8_1:75623040-75623059 Msa1214830:three_prime_UTR 35.0%
! TTTTGTCATCATACAAGGAG+TGG - chr8_1:75621973-75621992 None:intergenic 35.0%
! AGTTTCCTTTCATCTTTTGC+TGG - chr8_1:75622055-75622074 None:intergenic 35.0%
! TCTTCTAGGTTCTAGCTATT+TGG + chr8_1:75622172-75622191 Msa1214830:five_prime_UTR 35.0%
GGCTATATGCAATAGTAGTA+GGG - chr8_1:75622257-75622276 None:intergenic 35.0%
TGGCTATATGCAATAGTAGT+AGG - chr8_1:75622258-75622277 None:intergenic 35.0%
!!! AAGTTTTGGGAGAAAGAGAA+AGG - chr8_1:75622287-75622306 None:intergenic 35.0%
! AGTCTGCTGTGGTATATTTT+TGG - chr8_1:75622358-75622377 None:intergenic 35.0%
! AAGCATTTGTTAACACACCT+TGG - chr8_1:75622656-75622675 None:intergenic 35.0%
ATAACTAAAGTAGCCATGCA+AGG - chr8_1:75622689-75622708 None:intergenic 35.0%
ATTTCTCCTCATCACAAAGT+TGG + chr8_1:75622707-75622726 Msa1214830:CDS 35.0%
ATTTGACCAACTTTGTGATG+AGG - chr8_1:75622716-75622735 None:intergenic 35.0%
AGGGATACTATCTTATGTCA+TGG + chr8_1:75622768-75622787 Msa1214830:CDS 35.0%
ATATTGTGCCCAAGATATAG+TGG + chr8_1:75622859-75622878 Msa1214830:three_prime_UTR 35.0%
! TTAGTTCAAATTTGGTGGAG+TGG + chr8_1:75623040-75623059 Msa1214830:three_prime_UTR 35.0%
TTCAGCCAGCAAAAGATGAA+AGG + chr8_1:75622047-75622066 Msa1214830:five_prime_UTR 40.0%
! TCACAGAGTTGAGGTTTTCA+GGG - chr8_1:75622098-75622117 None:intergenic 40.0%
GAGAAAGAGAAAGGAAGGAA+TGG - chr8_1:75622278-75622297 None:intergenic 40.0%
TTTGGGAGAAAGAGAAAGGA+AGG - chr8_1:75622283-75622302 None:intergenic 40.0%
!!! CTGAAGTTTTTAGTCTGCTG+TGG - chr8_1:75622369-75622388 None:intergenic 40.0%
! CATTTGTTAACACACCTTGG+AGG - chr8_1:75622653-75622672 None:intergenic 40.0%
ATGTCATGGAAATGCAAGTG+TGG + chr8_1:75622782-75622801 Msa1214830:CDS 40.0%
TGCCAATGCCACTATATCTT+GGG - chr8_1:75622870-75622889 None:intergenic 40.0%
ATGCCAATGCCACTATATCT+TGG - chr8_1:75622871-75622890 None:intergenic 40.0%
TTCAGCCAGCAAAAGATGAA+AGG + chr8_1:75622047-75622066 Msa1214830:five_prime_UTR 40.0%
! TCACAGAGTTGAGGTTTTCA+GGG - chr8_1:75622098-75622117 None:intergenic 40.0%
GAGAAAGAGAAAGGAAGGAA+TGG - chr8_1:75622278-75622297 None:intergenic 40.0%
TTTGGGAGAAAGAGAAAGGA+AGG - chr8_1:75622283-75622302 None:intergenic 40.0%
!!! CTGAAGTTTTTAGTCTGCTG+TGG - chr8_1:75622369-75622388 None:intergenic 40.0%
! CATTTGTTAACACACCTTGG+AGG - chr8_1:75622653-75622672 None:intergenic 40.0%
ATGTCATGGAAATGCAAGTG+TGG + chr8_1:75622782-75622801 Msa1214830:CDS 40.0%
TGCCAATGCCACTATATCTT+GGG - chr8_1:75622870-75622889 None:intergenic 40.0%
ATGCCAATGCCACTATATCT+TGG - chr8_1:75622871-75622890 None:intergenic 40.0%
! CTCACAGAGTTGAGGTTTTC+AGG - chr8_1:75622099-75622118 None:intergenic 45.0%
TAGGTAAGCTCACAGAGTTG+AGG - chr8_1:75622107-75622126 None:intergenic 45.0%
TATTGGGATCAAGACCTCCA+AGG + chr8_1:75622636-75622655 Msa1214830:CDS 45.0%
CTTGAATTGCAGACCTTGCA+TGG + chr8_1:75622673-75622692 Msa1214830:CDS 45.0%
TGCCCAAGATATAGTGGCAT+TGG + chr8_1:75622865-75622884 Msa1214830:three_prime_UTR 45.0%
TTTGGTGGAGTGGCAAACAT+TGG + chr8_1:75623050-75623069 Msa1214830:three_prime_UTR 45.0%
! AGTGGCAAACATTGGTTGGA+GGG + chr8_1:75623058-75623077 Msa1214830:three_prime_UTR 45.0%
ATTGGTTGGAGGGGCTTATT+GGG + chr8_1:75623068-75623087 Msa1214830:three_prime_UTR 45.0%
! CTCACAGAGTTGAGGTTTTC+AGG - chr8_1:75622099-75622118 None:intergenic 45.0%
TAGGTAAGCTCACAGAGTTG+AGG - chr8_1:75622107-75622126 None:intergenic 45.0%
TATTGGGATCAAGACCTCCA+AGG + chr8_1:75622636-75622655 Msa1214830:CDS 45.0%
CTTGAATTGCAGACCTTGCA+TGG + chr8_1:75622673-75622692 Msa1214830:CDS 45.0%
TGCCCAAGATATAGTGGCAT+TGG + chr8_1:75622865-75622884 Msa1214830:three_prime_UTR 45.0%
TTTGGTGGAGTGGCAAACAT+TGG + chr8_1:75623050-75623069 Msa1214830:three_prime_UTR 45.0%
! AGTGGCAAACATTGGTTGGA+GGG + chr8_1:75623058-75623077 Msa1214830:three_prime_UTR 45.0%
ATTGGTTGGAGGGGCTTATT+GGG + chr8_1:75623068-75623087 Msa1214830:three_prime_UTR 45.0%
GTGGAGTGGCAAACATTGGT+TGG + chr8_1:75623054-75623073 Msa1214830:three_prime_UTR 50.0%
! GAGTGGCAAACATTGGTTGG+AGG + chr8_1:75623057-75623076 Msa1214830:three_prime_UTR 50.0%
! GTGGCAAACATTGGTTGGAG+GGG + chr8_1:75623059-75623078 Msa1214830:three_prime_UTR 50.0%
! CATTGGTTGGAGGGGCTTAT+TGG + chr8_1:75623067-75623086 Msa1214830:three_prime_UTR 50.0%
GTGGAGTGGCAAACATTGGT+TGG + chr8_1:75623054-75623073 Msa1214830:three_prime_UTR 50.0%
! GAGTGGCAAACATTGGTTGG+AGG + chr8_1:75623057-75623076 Msa1214830:three_prime_UTR 50.0%
! GTGGCAAACATTGGTTGGAG+GGG + chr8_1:75623059-75623078 Msa1214830:three_prime_UTR 50.0%
! CATTGGTTGGAGGGGCTTAT+TGG + chr8_1:75623067-75623086 Msa1214830:three_prime_UTR 50.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 75621956 75623129 75621956 ID=Msa1214830;Name=Msa1214830
chr8_1 mRNA 75621956 75623129 75621956 ID=Msa1214830-mRNA-1;Parent=Msa1214830;Name=Msa1214830-mRNA-1;_AED=0.04;_eAED=0.04;_QI=390|1|1|1|0|0|2|303|114
chr8_1 exon 75621956 75622436 75621956 ID=Msa1214830-mRNA-1:exon:25967;Parent=Msa1214830-mRNA-1
chr8_1 exon 75622573 75623129 75622573 ID=Msa1214830-mRNA-1:exon:25968;Parent=Msa1214830-mRNA-1
chr8_1 five_prime_UTR 75621956 75622345 75621956 ID=Msa1214830-mRNA-1:five_prime_utr;Parent=Msa1214830-mRNA-1
chr8_1 CDS 75622346 75622436 75622346 ID=Msa1214830-mRNA-1:cds;Parent=Msa1214830-mRNA-1
chr8_1 CDS 75622573 75622826 75622573 ID=Msa1214830-mRNA-1:cds;Parent=Msa1214830-mRNA-1
chr8_1 three_prime_UTR 75622827 75623129 75622827 ID=Msa1214830-mRNA-1:three_prime_utr;Parent=Msa1214830-mRNA-1
Gene Sequence

>Msa1214830

ATGGATTCACCAAAAATATACCACAGCAGACTAAAAACTTCAGTTACTCTGATTCTCATAATTTTTCTTACTTTATTTGCTTCTAATTTAGAAGGGTCACAAAATTTGAAGAAATATCATAGAAGTAAGGGTCTTATAAATCAAAAGAAATCAGTATTGGGATCAAGACCTCCAAGGTGTGTTAACAAATGCTTGAATTGCAGACCTTGCATGGCTACTTTAGTTATTTCTCCTCATCACAAAGTTGGTCAAATTCACAAAGCAAAAATAACAGCTGAAAAAGATGAGGGATACTATCTTATGTCATGGAAATGCAAGTGTGGTAACAAGTTCTTTCAACCTTGA
Protein sequence

>Msa1214830

MDSPKIYHSRLKTSVTLILIIFLTLFASNLEGSQNLKKYHRSKGLINQKKSVLGSRPPRCVNKCLNCRPCMATLVISPHHKVGQIHKAKITAEKDEGYYLMSWKCKCGNKFFQP*