Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215170 | XP_003609433.1 | 98.246 | 513 | 9 | 0 | 80 | 592 | 264 | 776 | 0.0 | 1026 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215170 | sp|P60300|CLCG_ARATH | 72.200 | 500 | 139 | 0 | 80 | 579 | 259 | 758 | 0.0 | 713 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215170 | G7JFF4 | 98.246 | 513 | 9 | 0 | 80 | 592 | 264 | 776 | 0.0 | 1026 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011920 | Msa1215170 | 0.803007 | 4.280733e-49 | -8.615850e-47 |
| Msa0091300 | Msa1215170 | 0.821003 | 5.085119e-53 | -8.615850e-47 |
| Msa0654570 | Msa1215170 | 0.805545 | 1.267729e-49 | -8.615850e-47 |
| Msa0223500 | Msa1215170 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
| Msa0295030 | Msa1215170 | 0.802434 | 5.620677e-49 | -8.615850e-47 |
| Msa1213470 | Msa1215170 | 0.802671 | 5.023056e-49 | -8.615850e-47 |
| Msa1215170 | Msa1251950 | 0.804775 | 1.836958e-49 | -8.615850e-47 |
| Msa1215170 | Msa1300370 | 0.804722 | 1.884278e-49 | -8.615850e-47 |
| Msa1215170 | Msa1301210 | 0.811792 | 5.865239e-51 | -8.615850e-47 |
| Msa1215170 | Msa1381870 | 0.809734 | 1.634592e-50 | -8.615850e-47 |
| Msa1215170 | Msa1412800 | 0.803039 | 4.217047e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215170 | MtrunA17_Chr4g0064521 | 98.246 | 513 | 9 | 0 | 80 | 592 | 264 | 776 | 0.0 | 1026 |
| Msa1215170 | MtrunA17_Chr4g0076971 | 60.532 | 489 | 192 | 1 | 80 | 568 | 282 | 769 | 0.0 | 597 |
| Msa1215170 | MtrunA17_Chr6g0477391 | 57.460 | 496 | 211 | 0 | 80 | 575 | 299 | 794 | 0.0 | 571 |
| Msa1215170 | MtrunA17_Chr2g0276881 | 57.143 | 497 | 206 | 4 | 80 | 570 | 262 | 757 | 0.0 | 555 |
| Msa1215170 | MtrunA17_Chr7g0225591 | 51.462 | 513 | 232 | 7 | 80 | 579 | 287 | 795 | 4.64e-173 | 511 |
| Msa1215170 | MtrunA17_Chr6g0459451 | 52.381 | 504 | 228 | 6 | 80 | 577 | 275 | 772 | 4.15e-166 | 492 |
| Msa1215170 | MtrunA17_Chr5g0394301 | 44.668 | 497 | 255 | 12 | 80 | 561 | 267 | 758 | 9.01e-122 | 378 |
| Msa1215170 | MtrunA17_Chr0c12g0493681 | 58.431 | 255 | 106 | 0 | 80 | 334 | 282 | 536 | 3.69e-99 | 311 |
| Msa1215170 | MtrunA17_Chr5g0396861 | 92.857 | 84 | 3 | 1 | 509 | 592 | 57 | 137 | 2.42e-45 | 157 |
| Msa1215170 | MtrunA17_Chr5g0396861 | 95.161 | 62 | 3 | 0 | 327 | 388 | 1 | 62 | 7.98e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215170 | AT5G33280.1 | 72.200 | 500 | 139 | 0 | 80 | 579 | 259 | 758 | 0.0 | 713 |
| Msa1215170 | AT5G49890.1 | 58.333 | 492 | 204 | 1 | 80 | 570 | 284 | 775 | 0.0 | 582 |
| Msa1215170 | AT3G27170.1 | 52.767 | 506 | 224 | 5 | 80 | 574 | 274 | 775 | 3.75e-179 | 526 |
| Msa1215170 | AT5G40890.2 | 51.881 | 505 | 234 | 4 | 80 | 579 | 143 | 643 | 1.90e-176 | 514 |
| Msa1215170 | AT5G40890.1 | 51.881 | 505 | 234 | 4 | 80 | 579 | 275 | 775 | 6.19e-175 | 515 |
| Msa1215170 | AT5G26240.2 | 44.467 | 497 | 256 | 12 | 80 | 562 | 264 | 754 | 5.65e-112 | 352 |
| Msa1215170 | AT5G26240.1 | 44.467 | 497 | 256 | 12 | 80 | 562 | 264 | 754 | 9.41e-112 | 352 |
Find 231 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCAAATATAACTAAAAT+TGG | 0.145145 | 8_1:+76428126 | None:intergenic |
| GGTGGAAAAGATTAAGATTT+TGG | 0.154444 | 8_1:-76428600 | Msa1215170:CDS |
| TCCATTAGAAAGATGGTTAT+TGG | 0.184721 | 8_1:+76432346 | None:intergenic |
| AACCTTTGGCTTTCATTATA+AGG | 0.186015 | 8_1:+76429436 | None:intergenic |
| CCATGTTATTCCATATCTTT+TGG | 0.216887 | 8_1:+76430820 | None:intergenic |
| TTTACATAGCTTACGTAAAA+AGG | 0.218604 | 8_1:+76428088 | None:intergenic |
| CACAAGCACCATCATTATTA+AGG | 0.234397 | 8_1:+76429503 | None:intergenic |
| TGCTTCTATCTACAGATTAT+TGG | 0.236275 | 8_1:-76430941 | Msa1215170:intron |
| AGGCATTCATAAATAATATT+TGG | 0.245534 | 8_1:+76428357 | None:intergenic |
| TTTATCTGAATATTGTTTCT+AGG | 0.245756 | 8_1:-76430518 | Msa1215170:CDS |
| TGTCAGTGTGCATGCTAAAT+AGG | 0.261184 | 8_1:+76429808 | None:intergenic |
| GTGTCAGGCTCTCTTGTTAT+TGG | 0.261989 | 8_1:-76430905 | Msa1215170:five_prime_UTR |
| TGTTCAACGAGCTTGTTTCT+AGG | 0.268487 | 8_1:-76430543 | Msa1215170:CDS |
| GGCCCGCTTCAGATGTTTAA+TGG | 0.275031 | 8_1:-76429348 | Msa1215170:CDS |
| GCACATTCTAGAAAAGATTA+TGG | 0.288396 | 8_1:-76428514 | Msa1215170:three_prime_UTR |
| AGCGACAAATGCGGTTTATT+CGG | 0.294443 | 8_1:-76430336 | Msa1215170:CDS |
| GCACCTGCTGCTGCTGGTTC+AGG | 0.297503 | 8_1:-76431708 | Msa1215170:five_prime_UTR |
| GATGCACCAGTCACGATAAT+TGG | 0.304109 | 8_1:+76429687 | None:intergenic |
| CCTCCTTTCTAACATCATAT+TGG | 0.307190 | 8_1:+76431919 | None:intergenic |
| TCGGCGTGAGTTTCTAAATA+AGG | 0.312251 | 8_1:+76429411 | None:intergenic |
| ATTACTTACACCGGGGATCT+TGG | 0.316979 | 8_1:+76428924 | None:intergenic |
| CAAGGCTATGTTCGTATAGA+TGG | 0.319410 | 8_1:-76428298 | Msa1215170:three_prime_UTR |
| CATTGTGTGCTGTTGTTCTA+AGG | 0.320107 | 8_1:+76429295 | None:intergenic |
| TCCAATAACCATCTTTCTAA+TGG | 0.326015 | 8_1:-76432347 | Msa1215170:five_prime_UTR |
| CTTGGCGCCGCTTCTCTTCT+CGG | 0.330337 | 8_1:-76429597 | Msa1215170:CDS |
| TACCCTTTGTCCAAAGGCTT+TGG | 0.333782 | 8_1:-76432668 | None:intergenic |
| GTTGTACTTGTAATAAAATA+AGG | 0.340345 | 8_1:+76432517 | None:intergenic |
| CGTGGAGGTTCGTCAATAAC+AGG | 0.341555 | 8_1:+76429267 | None:intergenic |
| GGTGGAGAACTGCCCTTCTA+TGG | 0.344587 | 8_1:-76430422 | Msa1215170:CDS |
| TGGGCGCCTGGTTGGAATAT+TGG | 0.344948 | 8_1:-76429661 | Msa1215170:CDS |
| TGTCAGGCTCTCTTGTTATT+GGG | 0.347800 | 8_1:-76430904 | Msa1215170:five_prime_UTR |
| CGGAATTCCATCAAATTATG+AGG | 0.363680 | 8_1:+76428484 | None:intergenic |
| TTTACACCGGAACATATATT+GGG | 0.365261 | 8_1:-76428649 | Msa1215170:CDS |
| TTATTAAGGGTAGCAATAAC+AGG | 0.368806 | 8_1:+76429517 | None:intergenic |
| GGGTAGCAATAACAGGTTAT+TGG | 0.369840 | 8_1:+76429524 | None:intergenic |
| TTTATAGCACCTGCTGCTGC+TGG | 0.370401 | 8_1:-76431714 | Msa1215170:five_prime_UTR |
| GCAAACAAGACGCCGCCAAC+AGG | 0.371987 | 8_1:+76430707 | None:intergenic |
| TTTGTAATGAATACGCGTTT+TGG | 0.373852 | 8_1:-76428060 | None:intergenic |
| AGCAAGTATTTCATACCATT+TGG | 0.381101 | 8_1:-76430280 | Msa1215170:CDS |
| GGCAAGGCCATTGTAGTGAT+TGG | 0.381404 | 8_1:+76429869 | None:intergenic |
| TAAGGCGAAGCATTGGTAAA+AGG | 0.383161 | 8_1:+76429027 | None:intergenic |
| ACAGTAGGTGATGTAGTTAC+AGG | 0.385155 | 8_1:-76429369 | Msa1215170:CDS |
| TGCATGTGTGGCAGCATTGT+TGG | 0.386826 | 8_1:-76430855 | Msa1215170:five_prime_UTR |
| TTTATGATTGGTTTAATTGT+TGG | 0.388222 | 8_1:-76432007 | Msa1215170:five_prime_UTR |
| CTCTTGAAGAGATGGCATCT+TGG | 0.393356 | 8_1:-76430685 | Msa1215170:five_prime_UTR |
| CAGGGAGGTTCCAAAAGATA+TGG | 0.397062 | 8_1:-76430830 | Msa1215170:five_prime_UTR |
| TTTATGTTAGGAAGATAGAT+AGG | 0.399060 | 8_1:+76430654 | None:intergenic |
| GCAAGCTTAATTAAGCTTGC+TGG | 0.400423 | 8_1:+76428535 | None:intergenic |
| TTACTTACACCGGGGATCTT+GGG | 0.403779 | 8_1:+76428925 | None:intergenic |
| GAAATGTGAGTATAATAATT+CGG | 0.404593 | 8_1:+76428457 | None:intergenic |
| ATCGTGACTGGTGCATCGTA+TGG | 0.406138 | 8_1:-76429681 | Msa1215170:CDS |
| CTTGCTGTTGAGAATCTTGC+TGG | 0.409241 | 8_1:-76431962 | Msa1215170:five_prime_UTR |
| CAGGTGCATCAACACCATTT+AGG | 0.409541 | 8_1:+76431664 | None:intergenic |
| GAAAACATTTGCTACACTCT+TGG | 0.413686 | 8_1:+76429476 | None:intergenic |
| AATGCGGTTTATTCGGTAAA+GGG | 0.418160 | 8_1:-76430329 | Msa1215170:CDS |
| ATTGTTTCCACAACAGTGTA+AGG | 0.418715 | 8_1:+76429009 | None:intergenic |
| CGGATTCTCCATTAGAAAGA+TGG | 0.423237 | 8_1:+76432339 | None:intergenic |
| ACTGTTAACTGCCTCATATA+TGG | 0.424377 | 8_1:+76429387 | None:intergenic |
| GAGGTGAAGGCTTACCTAAA+TGG | 0.426989 | 8_1:-76431678 | Msa1215170:five_prime_UTR |
| TCATGAATCTCCAAAGCCTT+TGG | 0.430683 | 8_1:+76432658 | None:intergenic |
| TGTGGCAGCATTGTTGGGTC+AGG | 0.431762 | 8_1:-76430849 | Msa1215170:five_prime_UTR |
| TCATAATCGAGACTTTCAAT+AGG | 0.433495 | 8_1:+76432227 | None:intergenic |
| ATGAATTCTTCAAGCAGGAT+TGG | 0.436516 | 8_1:-76432087 | Msa1215170:five_prime_UTR |
| TTGTGAAGTGGAGTTGATAA+TGG | 0.438558 | 8_1:+76432277 | None:intergenic |
| TCTTTAACAATGTGATAAGA+TGG | 0.439274 | 8_1:+76429205 | None:intergenic |
| GCTGCTTTCCGTGCCCCTGT+TGG | 0.441887 | 8_1:-76430722 | Msa1215170:five_prime_UTR |
| TAATAAAATAAGGTTAAAAC+AGG | 0.442983 | 8_1:+76432527 | None:intergenic |
| TATTGGGAAGGCAGGGCCTA+TGG | 0.443171 | 8_1:-76430888 | Msa1215170:five_prime_UTR |
| TTATAAGACAACAACGTTTG+TGG | 0.445842 | 8_1:+76432557 | None:intergenic |
| TCTCTTGTTATTGGGAAGGC+AGG | 0.446459 | 8_1:-76430896 | Msa1215170:five_prime_UTR |
| TTCTAAATAAGGCAAACCTT+TGG | 0.449470 | 8_1:+76429422 | None:intergenic |
| GCATGTGTGGCAGCATTGTT+GGG | 0.449956 | 8_1:-76430854 | Msa1215170:five_prime_UTR |
| ACCTCCACGTTCGGAAGCTC+CGG | 0.450353 | 8_1:-76429253 | Msa1215170:CDS |
| GGAGGGTTGTTCTGTGTGGG+AGG | 0.450388 | 8_1:+76428333 | None:intergenic |
| CTTGTTTGCTCTTGAAGAGA+TGG | 0.450612 | 8_1:-76430693 | Msa1215170:five_prime_UTR |
| CGGCGCCAAGTACAGCATAA+AGG | 0.456444 | 8_1:+76429610 | None:intergenic |
| GGACAAGGCTCAACAGCATC+AGG | 0.458226 | 8_1:+76429936 | None:intergenic |
| GTTGAGCCTTGTCCAACAAT+AGG | 0.459772 | 8_1:-76429927 | Msa1215170:CDS |
| GCTGTTGTAGGAGGGTTACT+TGG | 0.461931 | 8_1:-76430231 | Msa1215170:CDS |
| ATAACAAGGGTCGGCGAAGA+AGG | 0.464994 | 8_1:+76432312 | None:intergenic |
| TTGGAATTTCTTGTAGATAC+CGG | 0.468275 | 8_1:+76429899 | None:intergenic |
| GAGGGTTGTTCTGTGTGGGA+GGG | 0.468554 | 8_1:+76428334 | None:intergenic |
| TTTATTCTTGCTGTTGTAGG+AGG | 0.468757 | 8_1:-76430240 | Msa1215170:CDS |
| ATAAAGGCCATTGCTAAGAT+TGG | 0.469416 | 8_1:+76429626 | None:intergenic |
| GGGTCGGCGAAGAAGGGGTT+CGG | 0.473302 | 8_1:+76432319 | None:intergenic |
| TGCATACCCAATATATGTTC+CGG | 0.473807 | 8_1:+76428643 | None:intergenic |
| CATCAAATATAACTAAAATT+GGG | 0.473969 | 8_1:+76428127 | None:intergenic |
| TCAAAGGTATTCTGTTCTAC+AGG | 0.474382 | 8_1:-76430443 | Msa1215170:CDS |
| TAAGAACGACCGTGATCGAC+GGG | 0.474634 | 8_1:-76430780 | Msa1215170:five_prime_UTR |
| ATTATACTCACATTTCCAAA+AGG | 0.475879 | 8_1:-76428450 | Msa1215170:three_prime_UTR |
| TGTAGTGATTGGGAGGGCAT+TGG | 0.476880 | 8_1:+76429880 | None:intergenic |
| CATAATCGAGACTTTCAATA+GGG | 0.477328 | 8_1:+76432228 | None:intergenic |
| AATTTCCATCTGAAGAAAGA+AGG | 0.478470 | 8_1:+76430469 | None:intergenic |
| AATGGCCTTTATGCTGTACT+TGG | 0.480398 | 8_1:-76429615 | Msa1215170:CDS |
| GGAAGCATTACAGCAGTGTC+AGG | 0.481583 | 8_1:-76430920 | Msa1215170:five_prime_UTR |
| GGTTGTTCTGTGTGGGAGGG+AGG | 0.482089 | 8_1:+76428337 | None:intergenic |
| GAAAACCTTCTTTCTTCAGA+TGG | 0.482375 | 8_1:-76430474 | Msa1215170:CDS |
| CAAACAAGACGCCGCCAACA+GGG | 0.485853 | 8_1:+76430708 | None:intergenic |
| TATTGACGAACCTCCACGTT+CGG | 0.488282 | 8_1:-76429262 | Msa1215170:CDS |
| GCAAGGCCATTGTAGTGATT+GGG | 0.490272 | 8_1:+76429870 | None:intergenic |
| TTCTAACATCATATTGGATG+TGG | 0.492206 | 8_1:+76431925 | None:intergenic |
| CGCCTGGTTGGAATATTGGT+TGG | 0.493221 | 8_1:-76429657 | Msa1215170:CDS |
| TAACTGCCTCATATATGGTT+CGG | 0.497631 | 8_1:+76429392 | None:intergenic |
| TAACTATTCGCCACAGGTGA+TGG | 0.498368 | 8_1:+76429168 | None:intergenic |
| CTCTTGTTATTGGGAAGGCA+GGG | 0.499318 | 8_1:-76430895 | Msa1215170:five_prime_UTR |
| ATTGCTACCCTTAATAATGA+TGG | 0.499487 | 8_1:-76429511 | Msa1215170:CDS |
| ATAATATGTGGATCAGCAGC+TGG | 0.500065 | 8_1:-76430752 | Msa1215170:five_prime_UTR |
| ATGCCTGAACCAGCAGCAGC+AGG | 0.501410 | 8_1:+76431705 | None:intergenic |
| AGAGGAGACGAGGAAAGGAA+AGG | 0.502041 | 8_1:+76432470 | None:intergenic |
| TGTGGAATTGTTGCCCCAGC+CGG | 0.504228 | 8_1:-76429720 | Msa1215170:CDS |
| ACAAGCACCATCATTATTAA+GGG | 0.504610 | 8_1:+76429504 | None:intergenic |
| AAATGCGGTTTATTCGGTAA+AGG | 0.505387 | 8_1:-76430330 | Msa1215170:CDS |
| TGAGAATGAATTCTTCAAGC+AGG | 0.510740 | 8_1:-76432092 | Msa1215170:five_prime_UTR |
| CATCCAATATGATGTTAGAA+AGG | 0.512636 | 8_1:-76431922 | Msa1215170:five_prime_UTR |
| CAGGAGGAACATCTACCAAA+TGG | 0.514395 | 8_1:+76430265 | None:intergenic |
| ATTGGCACAAACAGACCGGC+TGG | 0.516040 | 8_1:+76429705 | None:intergenic |
| AGCAGGATTGGAGAAGTAGA+GGG | 0.517042 | 8_1:-76432075 | Msa1215170:five_prime_UTR |
| TGCAGTATATATGTATGAAG+TGG | 0.523408 | 8_1:-76432039 | Msa1215170:five_prime_UTR |
| AGGATTATACCGAATAAAAC+CGG | 0.523972 | 8_1:+76429234 | None:intergenic |
| ATACCGGATCGACCTATTGT+TGG | 0.524331 | 8_1:+76429915 | None:intergenic |
| CCTTGTTGTTCTGTGTGGGA+GGG | 0.524692 | 8_1:+76428316 | None:intergenic |
| GTGGGAGGGTTGTTCTGTGT+GGG | 0.524811 | 8_1:+76428330 | None:intergenic |
| TCAGATGGAAATTGTCTCAA+AGG | 0.525096 | 8_1:-76430459 | Msa1215170:CDS |
| GCAGGGCCTATGGTGCATAC+AGG | 0.525611 | 8_1:-76430878 | Msa1215170:five_prime_UTR |
| CTCTTCTCGGTGGATCTATG+AGG | 0.526330 | 8_1:-76429584 | Msa1215170:CDS |
| CTTAATAATGATGGTGCTTG+TGG | 0.527699 | 8_1:-76429502 | Msa1215170:CDS |
| AGGCTCTCTTGTTATTGGGA+AGG | 0.528136 | 8_1:-76430900 | Msa1215170:five_prime_UTR |
| GCTTTCCGTGCCCCTGTTGG+CGG | 0.532883 | 8_1:-76430719 | Msa1215170:five_prime_UTR |
| TTATTCTTGCTGTTGTAGGA+GGG | 0.533940 | 8_1:-76430239 | Msa1215170:CDS |
| TAACAAGGGTCGGCGAAGAA+GGG | 0.536478 | 8_1:+76432313 | None:intergenic |
| GATGTTTAATGGCATAGAGA+AGG | 0.537838 | 8_1:-76429337 | Msa1215170:CDS |
| CATGCACCTGTATGCACCAT+AGG | 0.537839 | 8_1:+76430872 | None:intergenic |
| CGACGGGATCTAATAATATG+TGG | 0.538742 | 8_1:-76430764 | Msa1215170:five_prime_UTR |
| TTGTTACACAATGAGCTCCT+TGG | 0.539253 | 8_1:-76428418 | Msa1215170:three_prime_UTR |
| ATTCGAGCTTTCGTCAATGT+TGG | 0.540164 | 8_1:-76429781 | Msa1215170:CDS |
| GCCTTGTTGTTCTGTGTGGG+AGG | 0.540368 | 8_1:+76428315 | None:intergenic |
| GAGTGTTGTGTCAGTGTGTG+TGG | 0.540640 | 8_1:+76432402 | None:intergenic |
| GGAAACAATGTCACTGGCAA+AGG | 0.542046 | 8_1:-76428995 | Msa1215170:CDS |
| TGCCATTAAACATCTGAAGC+GGG | 0.542581 | 8_1:+76429346 | None:intergenic |
| TGTGGGAGGGTTGTTCTGTG+TGG | 0.543448 | 8_1:+76428329 | None:intergenic |
| CAACAATAATTTACAAGCCA+AGG | 0.546621 | 8_1:+76428401 | None:intergenic |
| ACAGTTAACAGAGGAAGAGA+TGG | 0.546942 | 8_1:-76429070 | Msa1215170:CDS |
| ATAGCCTTGTTGTTCTGTGT+GGG | 0.547377 | 8_1:+76428312 | None:intergenic |
| CTCACGCCGAACCATATATG+AGG | 0.547878 | 8_1:-76429398 | Msa1215170:CDS |
| TGTCCAACAATAGGTCGATC+CGG | 0.548895 | 8_1:-76429918 | Msa1215170:CDS |
| AGACGCCGCCAACAGGGGCA+CGG | 0.550712 | 8_1:+76430714 | None:intergenic |
| CAGCGAGAGGAGAGGAGACG+AGG | 0.551275 | 8_1:+76432460 | None:intergenic |
| AAGCAGGATTGGAGAAGTAG+AGG | 0.553746 | 8_1:-76432076 | Msa1215170:five_prime_UTR |
| ACTTCACAAGTTGCCATCGT+TGG | 0.555294 | 8_1:-76432263 | Msa1215170:five_prime_UTR |
| TTTGTGCCAATTATCGTGAC+TGG | 0.556778 | 8_1:-76429693 | Msa1215170:CDS |
| AACAGTGTAAGGCGAAGCAT+TGG | 0.557234 | 8_1:+76429020 | None:intergenic |
| GTGGCAGCATTGTTGGGTCA+GGG | 0.558955 | 8_1:-76430848 | Msa1215170:five_prime_UTR |
| AACGATGGCAACTTGTGAAG+TGG | 0.562057 | 8_1:+76432265 | None:intergenic |
| AGAGGAGAGGAGACGAGGAA+AGG | 0.562226 | 8_1:+76432465 | None:intergenic |
| TGCTTCGCCTTACACTGTTG+TGG | 0.563362 | 8_1:-76429016 | Msa1215170:CDS |
| AAACAAGACGCCGCCAACAG+GGG | 0.564819 | 8_1:+76430709 | None:intergenic |
| AGCTTTCTTGCCATCACCTG+TGG | 0.566316 | 8_1:-76429178 | Msa1215170:CDS |
| AGGTGAACGTGTGAAGATTG+AGG | 0.567142 | 8_1:-76429097 | Msa1215170:CDS |
| CTAAATGGTGTTGATGCACC+TGG | 0.567226 | 8_1:-76431663 | Msa1215170:five_prime_UTR |
| TTAAGAACGACCGTGATCGA+CGG | 0.567551 | 8_1:-76430781 | Msa1215170:five_prime_UTR |
| TTGGCACAAACAGACCGGCT+GGG | 0.568535 | 8_1:+76429706 | None:intergenic |
| GACCTTATAATGAAAGCCAA+AGG | 0.568633 | 8_1:-76429438 | Msa1215170:CDS |
| GATATGGAATAACATGGAGA+TGG | 0.572288 | 8_1:-76430814 | Msa1215170:five_prime_UTR |
| TTCAGGCATATCAGAGGTGA+AGG | 0.573293 | 8_1:-76431691 | Msa1215170:five_prime_UTR |
| AAAACCGGAGCTTCCGAACG+TGG | 0.573799 | 8_1:+76429249 | None:intergenic |
| AACAAGGGTCGGCGAAGAAG+GGG | 0.575030 | 8_1:+76432314 | None:intergenic |
| TCGTGACTGGTGCATCGTAT+GGG | 0.575344 | 8_1:-76429680 | Msa1215170:CDS |
| TTATTAGATCCCGTCGATCA+CGG | 0.579129 | 8_1:+76430771 | None:intergenic |
| CATAGCCTTGTTGTTCTGTG+TGG | 0.584684 | 8_1:+76428311 | None:intergenic |
| TTGGAATATTGGTTGGAGAA+CGG | 0.585282 | 8_1:-76429650 | Msa1215170:CDS |
| ATGCGGTTTATTCGGTAAAG+GGG | 0.589321 | 8_1:-76430328 | Msa1215170:CDS |
| CCAAAAGATATGGAATAACA+TGG | 0.589697 | 8_1:-76430820 | Msa1215170:five_prime_UTR |
| GTGGTGGTAGGAGTGTGGTG+TGG | 0.591018 | 8_1:+76432593 | None:intergenic |
| CTTGTGATACCCAAGATCCC+CGG | 0.592899 | 8_1:-76428934 | Msa1215170:CDS |
| ACTTTCAATAGGGCAGACAT+TGG | 0.593228 | 8_1:+76432238 | None:intergenic |
| GATAATTGGCACAAACAGAC+CGG | 0.597731 | 8_1:+76429701 | None:intergenic |
| CAGTTAACAGAGGAAGAGAT+GGG | 0.598604 | 8_1:-76429069 | Msa1215170:CDS |
| GGAATTCCATCAAATTATGA+GGG | 0.598771 | 8_1:+76428485 | None:intergenic |
| AACGTTTGTGGCGTGAAACA+TGG | 0.600513 | 8_1:+76432569 | None:intergenic |
| CTCCAACCAATATTCCAACC+AGG | 0.602011 | 8_1:+76429655 | None:intergenic |
| AGGCCATTGTAGTGATTGGG+AGG | 0.602362 | 8_1:+76429873 | None:intergenic |
| TCAGACACGTGAGGTTGACA+TGG | 0.602936 | 8_1:+76432427 | None:intergenic |
| GAGTATAATAATTCGGACCT+CGG | 0.604663 | 8_1:+76428464 | None:intergenic |
| ACTACAGAGATCGCCTGTGG+TGG | 0.607667 | 8_1:-76428692 | Msa1215170:intron |
| GTGAAACATGGTGTGGTGGT+AGG | 0.610479 | 8_1:+76432581 | None:intergenic |
| AAAACAGTCAGCGAGAGGAG+AGG | 0.611361 | 8_1:+76432452 | None:intergenic |
| CTACAGAGATCGCCTGTGGT+GGG | 0.614442 | 8_1:-76428691 | Msa1215170:intron |
| TGCGGTTTATTCGGTAAAGG+GGG | 0.615006 | 8_1:-76430327 | Msa1215170:CDS |
| ATGCCATTAAACATCTGAAG+CGG | 0.615505 | 8_1:+76429345 | None:intergenic |
| AAGGTATTCTGTTCTACAGG+TGG | 0.615675 | 8_1:-76430440 | Msa1215170:CDS |
| TGTTGTGGAAACAATGTCAC+TGG | 0.617414 | 8_1:-76429001 | Msa1215170:CDS |
| TAATATGTGGATCAGCAGCT+GGG | 0.620560 | 8_1:-76430751 | Msa1215170:five_prime_UTR |
| CGCGTTAAGATACCCACCAC+AGG | 0.621842 | 8_1:+76428679 | None:intergenic |
| TGCCCTCCCAATCACTACAA+TGG | 0.622560 | 8_1:-76429876 | Msa1215170:CDS |
| CCAATATGATGTTAGAAAGG+AGG | 0.624045 | 8_1:-76431919 | Msa1215170:intron |
| TTTGAGAAGATAACAAGGGT+CGG | 0.629968 | 8_1:+76432303 | None:intergenic |
| GAACGGACCAATCTTAGCAA+TGG | 0.630884 | 8_1:-76429633 | Msa1215170:CDS |
| TATATGAGGCAGTTAACAGT+AGG | 0.631627 | 8_1:-76429384 | Msa1215170:CDS |
| CAGCATCAGGAGGACAAGGT+CGG | 0.633252 | 8_1:+76429949 | None:intergenic |
| ATGGTGTGGTGGTAGGAGTG+TGG | 0.633906 | 8_1:+76432588 | None:intergenic |
| ATGTGATAAGATGGTCGCGA+AGG | 0.633929 | 8_1:+76429214 | None:intergenic |
| GCAGCATTGTTGGGTCAGGG+AGG | 0.634000 | 8_1:-76430845 | Msa1215170:five_prime_UTR |
| GGATCTTTGAGAAGATAACA+AGG | 0.634504 | 8_1:+76432298 | None:intergenic |
| ACATCGTAACTATTCGCCAC+AGG | 0.636033 | 8_1:+76429162 | None:intergenic |
| CATAATTTGATGGAATTCCG+AGG | 0.637116 | 8_1:-76428481 | Msa1215170:three_prime_UTR |
| GGTGCATACAGGTGCATGTG+TGG | 0.639747 | 8_1:-76430867 | Msa1215170:five_prime_UTR |
| TGGTGAAAACAGTCAGCGAG+AGG | 0.640193 | 8_1:+76432447 | None:intergenic |
| GCAGACATTGGCACCAACGA+TGG | 0.641848 | 8_1:+76432250 | None:intergenic |
| AGATCCACCGAGAAGAGAAG+CGG | 0.642785 | 8_1:+76429590 | None:intergenic |
| ATGGAAAACAAATAGAACAA+AGG | 0.642805 | 8_1:-76428279 | Msa1215170:three_prime_UTR |
| GGCGCCGCTTCTCTTCTCGG+TGG | 0.649897 | 8_1:-76429594 | Msa1215170:CDS |
| CCCTCCCACACAGAACAACA+AGG | 0.650758 | 8_1:-76428316 | Msa1215170:three_prime_UTR |
| TCAACAGCATCAGGAGGACA+AGG | 0.655016 | 8_1:+76429945 | None:intergenic |
| ACCGGAGCTTCCGAACGTGG+AGG | 0.655454 | 8_1:+76429252 | None:intergenic |
| TGCTGGTTCAGGCATATCAG+AGG | 0.657900 | 8_1:-76431697 | Msa1215170:five_prime_UTR |
| CTTAGAACAACAGCACACAA+TGG | 0.660540 | 8_1:-76429294 | Msa1215170:CDS |
| ATACATCAATCATAGCTCGA+AGG | 0.662405 | 8_1:+76430364 | None:intergenic |
| CTGTGGTGGGTATCTTAACG+CGG | 0.663035 | 8_1:-76428678 | Msa1215170:CDS |
| GGCCATTGTAGTGATTGGGA+GGG | 0.663285 | 8_1:+76429874 | None:intergenic |
| TGGCGTGAAACATGGTGTGG+TGG | 0.676455 | 8_1:+76432577 | None:intergenic |
| TGAGGATATACAGTTAACAG+AGG | 0.678720 | 8_1:-76429079 | Msa1215170:CDS |
| GCAGGATTGGAGAAGTAGAG+GGG | 0.680188 | 8_1:-76432074 | Msa1215170:five_prime_UTR |
| CGGTGGATCTATGAGGACGA+CGG | 0.684535 | 8_1:-76429577 | Msa1215170:CDS |
| GTGGAGGTTCGTCAATAACA+GGG | 0.686133 | 8_1:+76429268 | None:intergenic |
| CAAGGCTCAACAGCATCAGG+AGG | 0.700522 | 8_1:+76429939 | None:intergenic |
| GATCGACCTATTGTTGGACA+AGG | 0.704395 | 8_1:+76429921 | None:intergenic |
| GATCTTTGAGAAGATAACAA+GGG | 0.705563 | 8_1:+76432299 | None:intergenic |
| TTGTGGCGTGAAACATGGTG+TGG | 0.720165 | 8_1:+76432574 | None:intergenic |
| GTGACTACAGAGATCGCCTG+TGG | 0.739731 | 8_1:-76428695 | Msa1215170:intron |
| TGTGTGGTTTCAGACACGTG+AGG | 0.740211 | 8_1:+76432418 | None:intergenic |
| GTATGTCTAAGCGACAAATG+CGG | 0.748311 | 8_1:-76430345 | Msa1215170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATTAAAAATCTCAA+GGG | + | chr8_1:76428837-76428856 | None:intergenic | 10.0% |
| !! | AAAATAAATTAAAAATCTCA+AGG | + | chr8_1:76428838-76428857 | None:intergenic | 10.0% |
| !! | TAATAAAATAAGGTTAAAAC+AGG | + | chr8_1:76428193-76428212 | None:intergenic | 15.0% |
| !! | TGAAGCAAAAAATATAAAAA+AGG | + | chr8_1:76428944-76428963 | None:intergenic | 15.0% |
| !!! | TATTATATAATTTGCTTATG+TGG | + | chr8_1:76429301-76429320 | None:intergenic | 15.0% |
| !!! | CAACAATAAAATTTTATGTT+AGG | + | chr8_1:76430078-76430097 | None:intergenic | 15.0% |
| !! | CATCAAATATAACTAAAATT+GGG | + | chr8_1:76432593-76432612 | None:intergenic | 15.0% |
| !! | TCATCAAATATAACTAAAAT+TGG | + | chr8_1:76432594-76432613 | None:intergenic | 15.0% |
| !! | GTTGTACTTGTAATAAAATA+AGG | + | chr8_1:76428203-76428222 | None:intergenic | 20.0% |
| !!! | AATTGATTCAGTTTCTATTA+TGG | - | chr8_1:76428588-76428607 | Msa1215170:CDS | 20.0% |
| !!! | ATTGATTCAGTTTCTATTAT+GGG | - | chr8_1:76428589-76428608 | Msa1215170:CDS | 20.0% |
| !!! | TTTATGATTGGTTTAATTGT+TGG | - | chr8_1:76428710-76428729 | Msa1215170:intron | 20.0% |
| !!! | GTTTAATTGTTGGTTTTATT+GGG | - | chr8_1:76428720-76428739 | Msa1215170:intron | 20.0% |
| !! | CATAAACAAGAAAGTAATAA+TGG | + | chr8_1:76428877-76428896 | None:intergenic | 20.0% |
| !!! | ACTTGTTTAATAGTTTTAGT+TGG | - | chr8_1:76429372-76429391 | Msa1215170:CDS | 20.0% |
| !!! | TTTATCTGAATATTGTTTCT+AGG | - | chr8_1:76430199-76430218 | Msa1215170:CDS | 20.0% |
| !!! | TTTTATTCAGAAAGTTAACT+AGG | - | chr8_1:76431845-76431864 | Msa1215170:intron | 20.0% |
| !! | TTTATTCAGAAAGTTAACTA+GGG | - | chr8_1:76431846-76431865 | Msa1215170:intron | 20.0% |
| !! | ATAGTGCATTGAATTTAAAA+GGG | + | chr8_1:76431947-76431966 | None:intergenic | 20.0% |
| !! | AATAGTGCATTGAATTTAAA+AGG | + | chr8_1:76431948-76431967 | None:intergenic | 20.0% |
| !!! | ACTAAGTTTTATTTTGTTCA+TGG | - | chr8_1:76432000-76432019 | Msa1215170:five_prime_UTR | 20.0% |
| !! | GAAATGTGAGTATAATAATT+CGG | + | chr8_1:76432263-76432282 | None:intergenic | 20.0% |
| !!! | TAACAATTTGATTTTCCTTT+TGG | + | chr8_1:76432285-76432304 | None:intergenic | 20.0% |
| !! | AGGCATTCATAAATAATATT+TGG | + | chr8_1:76432363-76432382 | None:intergenic | 20.0% |
| !!! | AGTTTTTTGTTCTTTTCATC+TGG | - | chr8_1:76428516-76428535 | Msa1215170:three_prime_UTR | 25.0% |
| !!! | GTTTTTTGTTCTTTTCATCT+GGG | - | chr8_1:76428517-76428536 | Msa1215170:three_prime_UTR | 25.0% |
| ! | AACTGAATCAATTAACAACA+TGG | + | chr8_1:76428581-76428600 | None:intergenic | 25.0% |
| !!! | GGTTTAATTGTTGGTTTTAT+TGG | - | chr8_1:76428719-76428738 | Msa1215170:intron | 25.0% |
| ! | TAAGAACTACAAAAGAACTA+CGG | + | chr8_1:76429276-76429295 | None:intergenic | 25.0% |
| ! | TATGTGATGCTAAAATTGTT+TGG | - | chr8_1:76429319-76429338 | Msa1215170:CDS | 25.0% |
| !!! | TAATAGTTTTAGTTGGAAGA+TGG | - | chr8_1:76429379-76429398 | Msa1215170:CDS | 25.0% |
| !!! | AATAGTTTTAGTTGGAAGAT+GGG | - | chr8_1:76429380-76429399 | Msa1215170:CDS | 25.0% |
| ! | AAAGACCTAAACAATGTAAT+TGG | + | chr8_1:76429446-76429465 | None:intergenic | 25.0% |
| ! | GGATTGAATCATTAAATTTG+TGG | + | chr8_1:76429525-76429544 | None:intergenic | 25.0% |
| ! | TGTTGGACTATATCTAATAA+AGG | + | chr8_1:76429711-76429730 | None:intergenic | 25.0% |
| ! | TTTATTAGATATAGTCCAAC+AGG | - | chr8_1:76429710-76429729 | Msa1215170:CDS | 25.0% |
| ! | TTTATGTTAGGAAGATAGAT+AGG | + | chr8_1:76430066-76430085 | None:intergenic | 25.0% |
| ! | AAGAAGACATGATGTAAAAA+TGG | + | chr8_1:76430722-76430741 | None:intergenic | 25.0% |
| !! | TTTACATCATGTCTTCTTTT+CGG | - | chr8_1:76430724-76430743 | Msa1215170:five_prime_UTR | 25.0% |
| !!! | TTTTTAAGTATCTTTAGCTG+TGG | - | chr8_1:76430979-76430998 | Msa1215170:intron | 25.0% |
| ! | TCTTTAACAATGTGATAAGA+TGG | + | chr8_1:76431515-76431534 | None:intergenic | 25.0% |
| ! | AATAAGCAAATTACTTACAC+CGG | + | chr8_1:76431805-76431824 | None:intergenic | 25.0% |
| ! | AATTCTGTAAAGAAATCTCA+AGG | - | chr8_1:76431893-76431912 | Msa1215170:intron | 25.0% |
| ! | TTCCTAGAAAAAATTCTTTC+TGG | - | chr8_1:76432146-76432165 | Msa1215170:intron | 25.0% |
| ! | ATTATACTCACATTTCCAAA+AGG | - | chr8_1:76432267-76432286 | Msa1215170:five_prime_UTR | 25.0% |
| ! | ATGGAAAACAAATAGAACAA+AGG | - | chr8_1:76432438-76432457 | Msa1215170:five_prime_UTR | 25.0% |
| ! | TTTACATAGCTTACGTAAAA+AGG | + | chr8_1:76432632-76432651 | None:intergenic | 25.0% |
| ! | GACTTGAGTTTCTGTATTTT+TGG | + | chr8_1:76428105-76428124 | None:intergenic | 30.0% |
| TTATAAGACAACAACGTTTG+TGG | + | chr8_1:76428163-76428182 | None:intergenic | 30.0% | |
| TCCAATAACCATCTTTCTAA+TGG | - | chr8_1:76428370-76428389 | Msa1215170:three_prime_UTR | 30.0% | |
| TCCATTAGAAAGATGGTTAT+TGG | + | chr8_1:76428374-76428393 | None:intergenic | 30.0% | |
| ! | GATCTTTGAGAAGATAACAA+GGG | + | chr8_1:76428421-76428440 | None:intergenic | 30.0% |
| CATAATCGAGACTTTCAATA+GGG | + | chr8_1:76428492-76428511 | None:intergenic | 30.0% | |
| TCATAATCGAGACTTTCAAT+AGG | + | chr8_1:76428493-76428512 | None:intergenic | 30.0% | |
| TGCAGTATATATGTATGAAG+TGG | - | chr8_1:76428678-76428697 | Msa1215170:CDS | 30.0% | |
| ! | TGGCTATTGTGTTTTATGAT+TGG | - | chr8_1:76428698-76428717 | Msa1215170:intron | 30.0% |
| TTCTAACATCATATTGGATG+TGG | + | chr8_1:76428795-76428814 | None:intergenic | 30.0% | |
| CATCCAATATGATGTTAGAA+AGG | - | chr8_1:76428795-76428814 | Msa1215170:intron | 30.0% | |
| ACTTATTTCGAATTGATTGC+AGG | - | chr8_1:76428908-76428927 | Msa1215170:intron | 30.0% | |
| ! | GCTTTTTGCGTCTATAATAA+CGG | - | chr8_1:76428978-76428997 | Msa1215170:CDS | 30.0% |
| ! | TGTACGAACTCTTTTTGTTA+AGG | - | chr8_1:76429086-76429105 | Msa1215170:CDS | 30.0% |
| AAGAACTACAAAAGAACTAC+GGG | + | chr8_1:76429275-76429294 | None:intergenic | 30.0% | |
| !! | TAAAATTGTTTGGTGTTGTG+TGG | - | chr8_1:76429329-76429348 | Msa1215170:CDS | 30.0% |
| AAGATGGGATTGTCAAAATT+TGG | - | chr8_1:76429395-76429414 | Msa1215170:CDS | 30.0% | |
| AAGTGCCAATTACATTGTTT+AGG | - | chr8_1:76429438-76429457 | Msa1215170:CDS | 30.0% | |
| GGAAAGAAAAGATAGGATAT+CGG | + | chr8_1:76429586-76429605 | None:intergenic | 30.0% | |
| ! | GAATTCTGTTGTTGGTAAAA+AGG | + | chr8_1:76429636-76429655 | None:intergenic | 30.0% |
| TGCTTCTATCTACAGATTAT+TGG | - | chr8_1:76429776-76429795 | Msa1215170:CDS | 30.0% | |
| ! | CCATGTTATTCCATATCTTT+TGG | + | chr8_1:76429900-76429919 | None:intergenic | 30.0% |
| CCAAAAGATATGGAATAACA+TGG | - | chr8_1:76429897-76429916 | Msa1215170:CDS | 30.0% | |
| ! | TTTTCACAATGTTTTGCTTG+AGG | - | chr8_1:76430109-76430128 | Msa1215170:intron | 30.0% |
| AATTTCCATCTGAAGAAAGA+AGG | + | chr8_1:76430251-76430270 | None:intergenic | 30.0% | |
| AAAAAAAGCTCTCCATAGAA+GGG | + | chr8_1:76430310-76430329 | None:intergenic | 30.0% | |
| TAAAAAAAGCTCTCCATAGA+AGG | + | chr8_1:76430311-76430330 | None:intergenic | 30.0% | |
| AGCAAGTATTTCATACCATT+TGG | - | chr8_1:76430437-76430456 | Msa1215170:CDS | 30.0% | |
| ACAACAGCAAGAATAAAAAC+AGG | + | chr8_1:76430474-76430493 | None:intergenic | 30.0% | |
| !!! | GTTTTTATTCTTGCTGTTGT+AGG | - | chr8_1:76430474-76430493 | Msa1215170:CDS | 30.0% |
| !! | CATGTTGACTTAACTACAAA+AGG | + | chr8_1:76430579-76430598 | None:intergenic | 30.0% |
| ! | CTTTTGTAGTTAAGTCAACA+TGG | - | chr8_1:76430577-76430596 | Msa1215170:CDS | 30.0% |
| AATAATTCGAAGAATGAGCT+TGG | + | chr8_1:76430647-76430666 | None:intergenic | 30.0% | |
| TTCGAATTATTTACTCTTGC+AGG | - | chr8_1:76430656-76430675 | Msa1215170:CDS | 30.0% | |
| ATTATTTACTCTTGCAGGAA+AGG | - | chr8_1:76430661-76430680 | Msa1215170:exon | 30.0% | |
| TTGGAATTTCTTGTAGATAC+CGG | + | chr8_1:76430821-76430840 | None:intergenic | 30.0% | |
| GTTTGTGTTAAAAATGAGAC+TGG | + | chr8_1:76430872-76430891 | None:intergenic | 30.0% | |
| TTATTAAGGGTAGCAATAAC+AGG | + | chr8_1:76431203-76431222 | None:intergenic | 30.0% | |
| ATTGCTACCCTTAATAATGA+TGG | - | chr8_1:76431206-76431225 | Msa1215170:intron | 30.0% | |
| ACAAGCACCATCATTATTAA+GGG | + | chr8_1:76431216-76431235 | None:intergenic | 30.0% | |
| !! | AACCTTTGGCTTTCATTATA+AGG | + | chr8_1:76431284-76431303 | None:intergenic | 30.0% |
| TTCTAAATAAGGCAAACCTT+TGG | + | chr8_1:76431298-76431317 | None:intergenic | 30.0% | |
| AGGATTATACCGAATAAAAC+CGG | + | chr8_1:76431486-76431505 | None:intergenic | 30.0% | |
| ! | ATCAGATGATTTTGCAAAGA+AGG | - | chr8_1:76431593-76431612 | Msa1215170:intron | 30.0% |
| ! | TCAGATGATTTTGCAAAGAA+GGG | - | chr8_1:76431594-76431613 | Msa1215170:intron | 30.0% |
| ATAAGCAAATTACTTACACC+GGG | + | chr8_1:76431804-76431823 | None:intergenic | 30.0% | |
| ! | TTTTACACCGGAACATATAT+TGG | - | chr8_1:76432067-76432086 | Msa1215170:five_prime_UTR | 30.0% |
| TTTACACCGGAACATATATT+GGG | - | chr8_1:76432068-76432087 | Msa1215170:five_prime_UTR | 30.0% | |
| ! | GGTGGAAAAGATTAAGATTT+TGG | - | chr8_1:76432117-76432136 | Msa1215170:intron | 30.0% |
| !!! | TGCCAGAAAGAATTTTTTCT+AGG | + | chr8_1:76432151-76432170 | None:intergenic | 30.0% |
| ! | GCACATTCTAGAAAAGATTA+TGG | - | chr8_1:76432203-76432222 | Msa1215170:intron | 30.0% |
| ! | CTTTTTCCCTCATAATTTGA+TGG | - | chr8_1:76432226-76432245 | Msa1215170:intron | 30.0% |
| GGAATTCCATCAAATTATGA+GGG | + | chr8_1:76432235-76432254 | None:intergenic | 30.0% | |
| CAACAATAATTTACAAGCCA+AGG | + | chr8_1:76432319-76432338 | None:intergenic | 30.0% | |
| TTTGAGAAGATAACAAGGGT+CGG | + | chr8_1:76428417-76428436 | None:intergenic | 35.0% | |
| ! | GGATCTTTGAGAAGATAACA+AGG | + | chr8_1:76428422-76428441 | None:intergenic | 35.0% |
| !! | TTGTGAAGTGGAGTTGATAA+TGG | + | chr8_1:76428443-76428462 | None:intergenic | 35.0% |
| AGTTTCTATTATGGGTTTGC+AGG | - | chr8_1:76428597-76428616 | Msa1215170:CDS | 35.0% | |
| TGAGAATGAATTCTTCAAGC+AGG | - | chr8_1:76428625-76428644 | Msa1215170:CDS | 35.0% | |
| ATGAATTCTTCAAGCAGGAT+TGG | - | chr8_1:76428630-76428649 | Msa1215170:CDS | 35.0% | |
| CCTCCTTTCTAACATCATAT+TGG | + | chr8_1:76428801-76428820 | None:intergenic | 35.0% | |
| CCAATATGATGTTAGAAAGG+AGG | - | chr8_1:76428798-76428817 | Msa1215170:intron | 35.0% | |
| GTTCGTACAGTAAAAATTCC+AGG | + | chr8_1:76429075-76429094 | None:intergenic | 35.0% | |
| TGAGTTTACCTGATCACATT+AGG | - | chr8_1:76429468-76429487 | Msa1215170:CDS | 35.0% | |
| GAGTTTACCTGATCACATTA+GGG | - | chr8_1:76429469-76429488 | Msa1215170:CDS | 35.0% | |
| GCAAGGCTACATTGATATAA+GGG | + | chr8_1:76429546-76429565 | None:intergenic | 35.0% | |
| AGAAAAGTAAACAGTAGGCA+AGG | + | chr8_1:76429563-76429582 | None:intergenic | 35.0% | |
| ATCGGAGAAAAGTAAACAGT+AGG | + | chr8_1:76429568-76429587 | None:intergenic | 35.0% | |
| GCGTTAAGGAAAGAAAAGAT+AGG | + | chr8_1:76429593-76429612 | None:intergenic | 35.0% | |
| TCAGCCTCATAATCTATCAT+TGG | - | chr8_1:76429654-76429673 | Msa1215170:CDS | 35.0% | |
| AGTGCCAATGATAGATTATG+AGG | + | chr8_1:76429661-76429680 | None:intergenic | 35.0% | |
| GAAAAAACAACACTTCCTGT+TGG | + | chr8_1:76429728-76429747 | None:intergenic | 35.0% | |
| GATATGGAATAACATGGAGA+TGG | - | chr8_1:76429903-76429922 | Msa1215170:CDS | 35.0% | |
| ! | ACAATGTTTTGCTTGAGGAT+TGG | - | chr8_1:76430114-76430133 | Msa1215170:intron | 35.0% |
| GAAAACCTTCTTTCTTCAGA+TGG | - | chr8_1:76430243-76430262 | Msa1215170:CDS | 35.0% | |
| TCAGATGGAAATTGTCTCAA+AGG | - | chr8_1:76430258-76430277 | Msa1215170:CDS | 35.0% | |
| !! | TCAAAGGTATTCTGTTCTAC+AGG | - | chr8_1:76430274-76430293 | Msa1215170:CDS | 35.0% |
| ATACATCAATCATAGCTCGA+AGG | + | chr8_1:76430356-76430375 | None:intergenic | 35.0% | |
| AAATGCGGTTTATTCGGTAA+AGG | - | chr8_1:76430387-76430406 | Msa1215170:CDS | 35.0% | |
| AATGCGGTTTATTCGGTAAA+GGG | - | chr8_1:76430388-76430407 | Msa1215170:CDS | 35.0% | |
| ACAGCAAGAATAAAAACAGG+AGG | + | chr8_1:76430471-76430490 | None:intergenic | 35.0% | |
| !! | TTTATTCTTGCTGTTGTAGG+AGG | - | chr8_1:76430477-76430496 | Msa1215170:CDS | 35.0% |
| !! | TTATTCTTGCTGTTGTAGGA+GGG | - | chr8_1:76430478-76430497 | Msa1215170:CDS | 35.0% |
| TGTTAAAAATGAGACTGGCA+AGG | + | chr8_1:76430867-76430886 | None:intergenic | 35.0% | |
| ! | TTGGAATATTGGTTGGAGAA+CGG | - | chr8_1:76431067-76431086 | Msa1215170:intron | 35.0% |
| ATAAAGGCCATTGCTAAGAT+TGG | + | chr8_1:76431094-76431113 | None:intergenic | 35.0% | |
| CACAAGCACCATCATTATTA+AGG | + | chr8_1:76431217-76431236 | None:intergenic | 35.0% | |
| ! | CTTAATAATGATGGTGCTTG+TGG | - | chr8_1:76431215-76431234 | Msa1215170:intron | 35.0% |
| ! | GAAAACATTTGCTACACTCT+TGG | + | chr8_1:76431244-76431263 | None:intergenic | 35.0% |
| GACCTTATAATGAAAGCCAA+AGG | - | chr8_1:76431279-76431298 | Msa1215170:intron | 35.0% | |
| TAACTGCCTCATATATGGTT+CGG | + | chr8_1:76431328-76431347 | None:intergenic | 35.0% | |
| ACTGTTAACTGCCTCATATA+TGG | + | chr8_1:76431333-76431352 | None:intergenic | 35.0% | |
| TATATGAGGCAGTTAACAGT+AGG | - | chr8_1:76431333-76431352 | Msa1215170:intron | 35.0% | |
| ATGCCATTAAACATCTGAAG+CGG | + | chr8_1:76431375-76431394 | None:intergenic | 35.0% | |
| GATGTTTAATGGCATAGAGA+AGG | - | chr8_1:76431380-76431399 | Msa1215170:intron | 35.0% | |
| TGAGGATATACAGTTAACAG+AGG | - | chr8_1:76431638-76431657 | Msa1215170:five_prime_UTR | 35.0% | |
| ATTGTTTCCACAACAGTGTA+AGG | + | chr8_1:76431711-76431730 | None:intergenic | 35.0% | |
| !!! | CTTATACTTTTTCGAGAGGT+CGG | - | chr8_1:76431747-76431766 | Msa1215170:five_prime_UTR | 35.0% |
| TAAGCAAATTACTTACACCG+GGG | + | chr8_1:76431803-76431822 | None:intergenic | 35.0% | |
| TGCATACCCAATATATGTTC+CGG | + | chr8_1:76432077-76432096 | None:intergenic | 35.0% | |
| !! | ATCCTTTTCTGGTAAAAAGC+AGG | - | chr8_1:76432096-76432115 | Msa1215170:five_prime_UTR | 35.0% |
| CGGAATTCCATCAAATTATG+AGG | + | chr8_1:76432236-76432255 | None:intergenic | 35.0% | |
| CATAATTTGATGGAATTCCG+AGG | - | chr8_1:76432236-76432255 | Msa1215170:five_prime_UTR | 35.0% | |
| GAGTATAATAATTCGGACCT+CGG | + | chr8_1:76432256-76432275 | None:intergenic | 35.0% | |
| ATTCACACCCCAAAAAACTT+CGG | - | chr8_1:76432562-76432581 | Msa1215170:five_prime_UTR | 35.0% | |
| CGGATTCTCCATTAGAAAGA+TGG | + | chr8_1:76428381-76428400 | None:intergenic | 40.0% | |
| ACTTTCAATAGGGCAGACAT+TGG | + | chr8_1:76428482-76428501 | None:intergenic | 40.0% | |
| GGAAAAACCTCAACATTCAG+AGG | + | chr8_1:76429144-76429163 | None:intergenic | 40.0% | |
| ! | TGTTGAGGTTTTTCCTTCGT+AGG | - | chr8_1:76429149-76429168 | Msa1215170:CDS | 40.0% |
| ! | GTTGAGGTTTTTCCTTCGTA+GGG | - | chr8_1:76429150-76429169 | Msa1215170:CDS | 40.0% |
| TTATCTATGTCACCCTACGA+AGG | + | chr8_1:76429165-76429184 | None:intergenic | 40.0% | |
| GTAATTGGCACTTGACAGTT+TGG | + | chr8_1:76429431-76429450 | None:intergenic | 40.0% | |
| TGAGATTCCCTAATGTGATC+AGG | + | chr8_1:76429479-76429498 | None:intergenic | 40.0% | |
| GGCAAGGCTACATTGATATA+AGG | + | chr8_1:76429547-76429566 | None:intergenic | 40.0% | |
| ATGAGGCTGAATTCTGTTGT+TGG | + | chr8_1:76429644-76429663 | None:intergenic | 40.0% | |
| !! | TGTCAGGCTCTCTTGTTATT+GGG | - | chr8_1:76429813-76429832 | Msa1215170:CDS | 40.0% |
| TTATTAGATCCCGTCGATCA+CGG | + | chr8_1:76429949-76429968 | None:intergenic | 40.0% | |
| CGACGGGATCTAATAATATG+TGG | - | chr8_1:76429953-76429972 | Msa1215170:CDS | 40.0% | |
| ATAATATGTGGATCAGCAGC+TGG | - | chr8_1:76429965-76429984 | Msa1215170:CDS | 40.0% | |
| TAATATGTGGATCAGCAGCT+GGG | - | chr8_1:76429966-76429985 | Msa1215170:CDS | 40.0% | |
| CTTGTTTGCTCTTGAAGAGA+TGG | - | chr8_1:76430024-76430043 | Msa1215170:CDS | 40.0% | |
| ! | TGTTCAACGAGCTTGTTTCT+AGG | - | chr8_1:76430174-76430193 | Msa1215170:CDS | 40.0% |
| ! | AAGGTATTCTGTTCTACAGG+TGG | - | chr8_1:76430277-76430296 | Msa1215170:CDS | 40.0% |
| GTATGTCTAAGCGACAAATG+CGG | - | chr8_1:76430372-76430391 | Msa1215170:CDS | 40.0% | |
| AGCGACAAATGCGGTTTATT+CGG | - | chr8_1:76430381-76430400 | Msa1215170:CDS | 40.0% | |
| ATGCGGTTTATTCGGTAAAG+GGG | - | chr8_1:76430389-76430408 | Msa1215170:CDS | 40.0% | |
| TGTCAGTGTGCATGCTAAAT+AGG | + | chr8_1:76430912-76430931 | None:intergenic | 40.0% | |
| ATTCGAGCTTTCGTCAATGT+TGG | - | chr8_1:76430936-76430955 | Msa1215170:intron | 40.0% | |
| GATAATTGGCACAAACAGAC+CGG | + | chr8_1:76431019-76431038 | None:intergenic | 40.0% | |
| TTTGTGCCAATTATCGTGAC+TGG | - | chr8_1:76431024-76431043 | Msa1215170:intron | 40.0% | |
| AATGGCCTTTATGCTGTACT+TGG | - | chr8_1:76431102-76431121 | Msa1215170:intron | 40.0% | |
| GGGTAGCAATAACAGGTTAT+TGG | + | chr8_1:76431196-76431215 | None:intergenic | 40.0% | |
| TCGGCGTGAGTTTCTAAATA+AGG | + | chr8_1:76431309-76431328 | None:intergenic | 40.0% | |
| ACAGTAGGTGATGTAGTTAC+AGG | - | chr8_1:76431348-76431367 | Msa1215170:intron | 40.0% | |
| ! | TGCCATTAAACATCTGAAGC+GGG | + | chr8_1:76431374-76431393 | None:intergenic | 40.0% |
| ! | CATTGTGTGCTGTTGTTCTA+AGG | + | chr8_1:76431425-76431444 | None:intergenic | 40.0% |
| CTTAGAACAACAGCACACAA+TGG | - | chr8_1:76431423-76431442 | Msa1215170:intron | 40.0% | |
| ! | GATTTTGCAAAGAAGGGTTC+AGG | - | chr8_1:76431600-76431619 | Msa1215170:intron | 40.0% |
| ACAGTTAACAGAGGAAGAGA+TGG | - | chr8_1:76431647-76431666 | Msa1215170:five_prime_UTR | 40.0% | |
| CAGTTAACAGAGGAAGAGAT+GGG | - | chr8_1:76431648-76431667 | Msa1215170:five_prime_UTR | 40.0% | |
| !! | TAAGGCGAAGCATTGGTAAA+AGG | + | chr8_1:76431693-76431712 | None:intergenic | 40.0% |
| TGTTGTGGAAACAATGTCAC+TGG | - | chr8_1:76431716-76431735 | Msa1215170:five_prime_UTR | 40.0% | |
| !!! | GGCACTTATACTTTTTCGAG+AGG | - | chr8_1:76431743-76431762 | Msa1215170:five_prime_UTR | 40.0% |
| ! | ATTGGGTATGCATCCTTTTC+TGG | - | chr8_1:76432085-76432104 | Msa1215170:five_prime_UTR | 40.0% |
| !!! | CACCTGCTTTTTACCAGAAA+AGG | + | chr8_1:76432101-76432120 | None:intergenic | 40.0% |
| !! | CTTTTCTGGTAAAAAGCAGG+TGG | - | chr8_1:76432099-76432118 | Msa1215170:five_prime_UTR | 40.0% |
| GCAAGCTTAATTAAGCTTGC+TGG | + | chr8_1:76432185-76432204 | None:intergenic | 40.0% | |
| TTGTTACACAATGAGCTCCT+TGG | - | chr8_1:76432299-76432318 | Msa1215170:five_prime_UTR | 40.0% | |
| !! | ATAGCCTTGTTGTTCTGTGT+GGG | + | chr8_1:76432408-76432427 | None:intergenic | 40.0% |
| CAAGGCTATGTTCGTATAGA+TGG | - | chr8_1:76432419-76432438 | Msa1215170:five_prime_UTR | 40.0% | |
| !!! | GGTGTAACCGAAGTTTTTTG+GGG | + | chr8_1:76432572-76432591 | None:intergenic | 40.0% |
| !!! | GGGTGTAACCGAAGTTTTTT+GGG | + | chr8_1:76432573-76432592 | None:intergenic | 40.0% |
| !!! | TGGGTGTAACCGAAGTTTTT+TGG | + | chr8_1:76432574-76432593 | None:intergenic | 40.0% |
| AACGTTTGTGGCGTGAAACA+TGG | + | chr8_1:76428151-76428170 | None:intergenic | 45.0% | |
| AACGATGGCAACTTGTGAAG+TGG | + | chr8_1:76428455-76428474 | None:intergenic | 45.0% | |
| ACTTCACAAGTTGCCATCGT+TGG | - | chr8_1:76428454-76428473 | Msa1215170:three_prime_UTR | 45.0% | |
| AAGCAGGATTGGAGAAGTAG+AGG | - | chr8_1:76428641-76428660 | Msa1215170:CDS | 45.0% | |
| AGCAGGATTGGAGAAGTAGA+GGG | - | chr8_1:76428642-76428661 | Msa1215170:CDS | 45.0% | |
| !! | CTTGCTGTTGAGAATCTTGC+TGG | - | chr8_1:76428755-76428774 | Msa1215170:intron | 45.0% |
| TTCAGGCATATCAGAGGTGA+AGG | - | chr8_1:76429026-76429045 | Msa1215170:CDS | 45.0% | |
| GAGGTGAAGGCTTACCTAAA+TGG | - | chr8_1:76429039-76429058 | Msa1215170:CDS | 45.0% | |
| CAGGTGCATCAACACCATTT+AGG | + | chr8_1:76429056-76429075 | None:intergenic | 45.0% | |
| !! | CTAAATGGTGTTGATGCACC+TGG | - | chr8_1:76429054-76429073 | Msa1215170:CDS | 45.0% |
| TAACGAGCTCGTTAGTACGA+TGG | - | chr8_1:76429182-76429201 | Msa1215170:CDS | 45.0% | |
| AGCATGTGCTCTATGCGTTA+AGG | + | chr8_1:76429607-76429626 | None:intergenic | 45.0% | |
| ! | GTGTCAGGCTCTCTTGTTAT+TGG | - | chr8_1:76429812-76429831 | Msa1215170:CDS | 45.0% |
| !! | AGGCTCTCTTGTTATTGGGA+AGG | - | chr8_1:76429817-76429836 | Msa1215170:CDS | 45.0% |
| !! | TCTCTTGTTATTGGGAAGGC+AGG | - | chr8_1:76429821-76429840 | Msa1215170:CDS | 45.0% |
| !! | CTCTTGTTATTGGGAAGGCA+GGG | - | chr8_1:76429822-76429841 | Msa1215170:CDS | 45.0% |
| CAGGGAGGTTCCAAAAGATA+TGG | - | chr8_1:76429887-76429906 | Msa1215170:CDS | 45.0% | |
| TTAAGAACGACCGTGATCGA+CGG | - | chr8_1:76429936-76429955 | Msa1215170:CDS | 45.0% | |
| CTCTTGAAGAGATGGCATCT+TGG | - | chr8_1:76430032-76430051 | Msa1215170:CDS | 45.0% | |
| TGCGGTTTATTCGGTAAAGG+GGG | - | chr8_1:76430390-76430409 | Msa1215170:CDS | 45.0% | |
| CAGGAGGAACATCTACCAAA+TGG | + | chr8_1:76430455-76430474 | None:intergenic | 45.0% | |
| CGTAACGTTGTACACTGTTG+TGG | - | chr8_1:76430616-76430635 | Msa1215170:CDS | 45.0% | |
| ! | GTCTTCTTTTCGGATTGCCA+TGG | - | chr8_1:76430734-76430753 | Msa1215170:five_prime_UTR | 45.0% |
| ! | GTTGAGCCTTGTCCAACAAT+AGG | - | chr8_1:76430790-76430809 | Msa1215170:five_prime_UTR | 45.0% |
| GATCGACCTATTGTTGGACA+AGG | + | chr8_1:76430799-76430818 | None:intergenic | 45.0% | |
| TGTCCAACAATAGGTCGATC+CGG | - | chr8_1:76430799-76430818 | Msa1215170:five_prime_UTR | 45.0% | |
| ATACCGGATCGACCTATTGT+TGG | + | chr8_1:76430805-76430824 | None:intergenic | 45.0% | |
| GCAAGGCCATTGTAGTGATT+GGG | + | chr8_1:76430850-76430869 | None:intergenic | 45.0% | |
| GATGCACCAGTCACGATAAT+TGG | + | chr8_1:76431033-76431052 | None:intergenic | 45.0% | |
| CTCCAACCAATATTCCAACC+AGG | + | chr8_1:76431065-76431084 | None:intergenic | 45.0% | |
| GAACGGACCAATCTTAGCAA+TGG | - | chr8_1:76431084-76431103 | Msa1215170:intron | 45.0% | |
| GTGGAGGTTCGTCAATAACA+GGG | + | chr8_1:76431452-76431471 | None:intergenic | 45.0% | |
| TATTGACGAACCTCCACGTT+CGG | - | chr8_1:76431455-76431474 | Msa1215170:intron | 45.0% | |
| !!! | TCGGAAGCTCCGGTTTTATT+CGG | - | chr8_1:76431474-76431493 | Msa1215170:intron | 45.0% |
| ATGTGATAAGATGGTCGCGA+AGG | + | chr8_1:76431506-76431525 | None:intergenic | 45.0% | |
| TAACTATTCGCCACAGGTGA+TGG | + | chr8_1:76431552-76431571 | None:intergenic | 45.0% | |
| ACATCGTAACTATTCGCCAC+AGG | + | chr8_1:76431558-76431577 | None:intergenic | 45.0% | |
| AGGTGAACGTGTGAAGATTG+AGG | - | chr8_1:76431620-76431639 | Msa1215170:intron | 45.0% | |
| AACAGTGTAAGGCGAAGCAT+TGG | + | chr8_1:76431700-76431719 | None:intergenic | 45.0% | |
| GGAAACAATGTCACTGGCAA+AGG | - | chr8_1:76431722-76431741 | Msa1215170:five_prime_UTR | 45.0% | |
| TTACTTACACCGGGGATCTT+GGG | + | chr8_1:76431795-76431814 | None:intergenic | 45.0% | |
| ATTACTTACACCGGGGATCT+TGG | + | chr8_1:76431796-76431815 | None:intergenic | 45.0% | |
| ! | AACGCGGCATGATTTTACAC+CGG | - | chr8_1:76432055-76432074 | Msa1215170:five_prime_UTR | 45.0% |
| !! | CATAGCCTTGTTGTTCTGTG+TGG | + | chr8_1:76432409-76432428 | None:intergenic | 45.0% |
| GTGAAACATGGTGTGGTGGT+AGG | + | chr8_1:76428139-76428158 | None:intergenic | 50.0% | |
| TTGTGGCGTGAAACATGGTG+TGG | + | chr8_1:76428146-76428165 | None:intergenic | 50.0% | |
| AGAGGAGACGAGGAAAGGAA+AGG | + | chr8_1:76428250-76428269 | None:intergenic | 50.0% | |
| AAAACAGTCAGCGAGAGGAG+AGG | + | chr8_1:76428268-76428287 | None:intergenic | 50.0% | |
| TGGTGAAAACAGTCAGCGAG+AGG | + | chr8_1:76428273-76428292 | None:intergenic | 50.0% | |
| TCAGACACGTGAGGTTGACA+TGG | + | chr8_1:76428293-76428312 | None:intergenic | 50.0% | |
| TGTGTGGTTTCAGACACGTG+AGG | + | chr8_1:76428302-76428321 | None:intergenic | 50.0% | |
| ! | GAGTGTTGTGTCAGTGTGTG+TGG | + | chr8_1:76428318-76428337 | None:intergenic | 50.0% |
| TAACAAGGGTCGGCGAAGAA+GGG | + | chr8_1:76428407-76428426 | None:intergenic | 50.0% | |
| ATAACAAGGGTCGGCGAAGA+AGG | + | chr8_1:76428408-76428427 | None:intergenic | 50.0% | |
| GCAGGATTGGAGAAGTAGAG+GGG | - | chr8_1:76428643-76428662 | Msa1215170:CDS | 50.0% | |
| TTTATAGCACCTGCTGCTGC+TGG | - | chr8_1:76429003-76429022 | Msa1215170:CDS | 50.0% | |
| !! | TGCTGGTTCAGGCATATCAG+AGG | - | chr8_1:76429020-76429039 | Msa1215170:CDS | 50.0% |
| CGACACTCCTCTGAATGTTG+AGG | - | chr8_1:76429134-76429153 | Msa1215170:CDS | 50.0% | |
| !! | GGAAGCATTACAGCAGTGTC+AGG | - | chr8_1:76429797-76429816 | Msa1215170:CDS | 50.0% |
| CATGCACCTGTATGCACCAT+AGG | + | chr8_1:76429848-76429867 | None:intergenic | 50.0% | |
| TGCATGTGTGGCAGCATTGT+TGG | - | chr8_1:76429862-76429881 | Msa1215170:CDS | 50.0% | |
| GCATGTGTGGCAGCATTGTT+GGG | - | chr8_1:76429863-76429882 | Msa1215170:CDS | 50.0% | |
| TAAGAACGACCGTGATCGAC+GGG | - | chr8_1:76429937-76429956 | Msa1215170:CDS | 50.0% | |
| GCTGTTGTAGGAGGGTTACT+TGG | - | chr8_1:76430486-76430505 | Msa1215170:CDS | 50.0% | |
| TCAACAGCATCAGGAGGACA+AGG | + | chr8_1:76430775-76430794 | None:intergenic | 50.0% | |
| ! | TGTAGTGATTGGGAGGGCAT+TGG | + | chr8_1:76430840-76430859 | None:intergenic | 50.0% |
| TGCCCTCCCAATCACTACAA+TGG | - | chr8_1:76430841-76430860 | Msa1215170:five_prime_UTR | 50.0% | |
| GGCCATTGTAGTGATTGGGA+GGG | + | chr8_1:76430846-76430865 | None:intergenic | 50.0% | |
| AGGCCATTGTAGTGATTGGG+AGG | + | chr8_1:76430847-76430866 | None:intergenic | 50.0% | |
| GGCAAGGCCATTGTAGTGAT+TGG | + | chr8_1:76430851-76430870 | None:intergenic | 50.0% | |
| ATCGTGACTGGTGCATCGTA+TGG | - | chr8_1:76431036-76431055 | Msa1215170:intron | 50.0% | |
| TCGTGACTGGTGCATCGTAT+GGG | - | chr8_1:76431037-76431056 | Msa1215170:intron | 50.0% | |
| CGCCTGGTTGGAATATTGGT+TGG | - | chr8_1:76431060-76431079 | Msa1215170:intron | 50.0% | |
| AGATCCACCGAGAAGAGAAG+CGG | + | chr8_1:76431130-76431149 | None:intergenic | 50.0% | |
| CTCTTCTCGGTGGATCTATG+AGG | - | chr8_1:76431133-76431152 | Msa1215170:intron | 50.0% | |
| CTCACGCCGAACCATATATG+AGG | - | chr8_1:76431319-76431338 | Msa1215170:intron | 50.0% | |
| GGCCCGCTTCAGATGTTTAA+TGG | - | chr8_1:76431369-76431388 | Msa1215170:intron | 50.0% | |
| CGTGGAGGTTCGTCAATAAC+AGG | + | chr8_1:76431453-76431472 | None:intergenic | 50.0% | |
| AGCTTTCTTGCCATCACCTG+TGG | - | chr8_1:76431539-76431558 | Msa1215170:intron | 50.0% | |
| TGCTTCGCCTTACACTGTTG+TGG | - | chr8_1:76431701-76431720 | Msa1215170:five_prime_UTR | 50.0% | |
| CTTGTGATACCCAAGATCCC+CGG | - | chr8_1:76431783-76431802 | Msa1215170:five_prime_UTR | 50.0% | |
| !! | CTGTGGTGGGTATCTTAACG+CGG | - | chr8_1:76432039-76432058 | Msa1215170:five_prime_UTR | 50.0% |
| !! | CCTTGTTGTTCTGTGTGGGA+GGG | + | chr8_1:76432404-76432423 | None:intergenic | 50.0% |
| ATGGTGTGGTGGTAGGAGTG+TGG | + | chr8_1:76428132-76428151 | None:intergenic | 55.0% | |
| TGGCGTGAAACATGGTGTGG+TGG | + | chr8_1:76428143-76428162 | None:intergenic | 55.0% | |
| AGAGGAGAGGAGACGAGGAA+AGG | + | chr8_1:76428255-76428274 | None:intergenic | 55.0% | |
| AACAAGGGTCGGCGAAGAAG+GGG | + | chr8_1:76428406-76428425 | None:intergenic | 55.0% | |
| GCAGACATTGGCACCAACGA+TGG | + | chr8_1:76428470-76428489 | None:intergenic | 55.0% | |
| TATTGGGAAGGCAGGGCCTA+TGG | - | chr8_1:76429829-76429848 | Msa1215170:CDS | 55.0% | |
| GGTGCATACAGGTGCATGTG+TGG | - | chr8_1:76429850-76429869 | Msa1215170:CDS | 55.0% | |
| TGTGGCAGCATTGTTGGGTC+AGG | - | chr8_1:76429868-76429887 | Msa1215170:CDS | 55.0% | |
| GTGGCAGCATTGTTGGGTCA+GGG | - | chr8_1:76429869-76429888 | Msa1215170:CDS | 55.0% | |
| AAACAAGACGCCGCCAACAG+GGG | + | chr8_1:76430011-76430030 | None:intergenic | 55.0% | |
| CAAACAAGACGCCGCCAACA+GGG | + | chr8_1:76430012-76430031 | None:intergenic | 55.0% | |
| GGTGGAGAACTGCCCTTCTA+TGG | - | chr8_1:76430295-76430314 | Msa1215170:CDS | 55.0% | |
| ! | GGTCGGCATTTTGCAAGCCA+TGG | + | chr8_1:76430754-76430773 | None:intergenic | 55.0% |
| CAGCATCAGGAGGACAAGGT+CGG | + | chr8_1:76430771-76430790 | None:intergenic | 55.0% | |
| CAAGGCTCAACAGCATCAGG+AGG | + | chr8_1:76430781-76430800 | None:intergenic | 55.0% | |
| GGACAAGGCTCAACAGCATC+AGG | + | chr8_1:76430784-76430803 | None:intergenic | 55.0% | |
| TGTGGAATTGTTGCCCCAGC+CGG | - | chr8_1:76430997-76431016 | Msa1215170:intron | 55.0% | |
| TTGGCACAAACAGACCGGCT+GGG | + | chr8_1:76431014-76431033 | None:intergenic | 55.0% | |
| ATTGGCACAAACAGACCGGC+TGG | + | chr8_1:76431015-76431034 | None:intergenic | 55.0% | |
| TGGGCGCCTGGTTGGAATAT+TGG | - | chr8_1:76431056-76431075 | Msa1215170:intron | 55.0% | |
| CGGCGCCAAGTACAGCATAA+AGG | + | chr8_1:76431110-76431129 | None:intergenic | 55.0% | |
| CGGTGGATCTATGAGGACGA+CGG | - | chr8_1:76431140-76431159 | Msa1215170:intron | 55.0% | |
| AAAACCGGAGCTTCCGAACG+TGG | + | chr8_1:76431471-76431490 | None:intergenic | 55.0% | |
| GTGACTACAGAGATCGCCTG+TGG | - | chr8_1:76432022-76432041 | Msa1215170:five_prime_UTR | 55.0% | |
| ACTACAGAGATCGCCTGTGG+TGG | - | chr8_1:76432025-76432044 | Msa1215170:five_prime_UTR | 55.0% | |
| CTACAGAGATCGCCTGTGGT+GGG | - | chr8_1:76432026-76432045 | Msa1215170:five_prime_UTR | 55.0% | |
| CGCGTTAAGATACCCACCAC+AGG | + | chr8_1:76432041-76432060 | None:intergenic | 55.0% | |
| GAGGGTTGTTCTGTGTGGGA+GGG | + | chr8_1:76432386-76432405 | None:intergenic | 55.0% | |
| GTGGGAGGGTTGTTCTGTGT+GGG | + | chr8_1:76432390-76432409 | None:intergenic | 55.0% | |
| TGTGGGAGGGTTGTTCTGTG+TGG | + | chr8_1:76432391-76432410 | None:intergenic | 55.0% | |
| CCCTCCCACACAGAACAACA+AGG | - | chr8_1:76432401-76432420 | Msa1215170:five_prime_UTR | 55.0% | |
| !! | GCCTTGTTGTTCTGTGTGGG+AGG | + | chr8_1:76432405-76432424 | None:intergenic | 55.0% |
| ! | GTGGTGGTAGGAGTGTGGTG+TGG | + | chr8_1:76428127-76428146 | None:intergenic | 60.0% |
| ATGCCTGAACCAGCAGCAGC+AGG | + | chr8_1:76429015-76429034 | None:intergenic | 60.0% | |
| GCAGGGCCTATGGTGCATAC+AGG | - | chr8_1:76429839-76429858 | Msa1215170:CDS | 60.0% | |
| GCAGCATTGTTGGGTCAGGG+AGG | - | chr8_1:76429872-76429891 | Msa1215170:CDS | 60.0% | |
| GCAAACAAGACGCCGCCAAC+AGG | + | chr8_1:76430013-76430032 | None:intergenic | 60.0% | |
| TGGCACAAACAGACCGGCTG+GGG | + | chr8_1:76431013-76431032 | None:intergenic | 60.0% | |
| CTTGGCGCCGCTTCTCTTCT+CGG | - | chr8_1:76431120-76431139 | Msa1215170:intron | 60.0% | |
| ACCTCCACGTTCGGAAGCTC+CGG | - | chr8_1:76431464-76431483 | Msa1215170:intron | 60.0% | |
| GGTTGTTCTGTGTGGGAGGG+AGG | + | chr8_1:76432383-76432402 | None:intergenic | 60.0% | |
| GGAGGGTTGTTCTGTGTGGG+AGG | + | chr8_1:76432387-76432406 | None:intergenic | 60.0% | |
| CAGCGAGAGGAGAGGAGACG+AGG | + | chr8_1:76428260-76428279 | None:intergenic | 65.0% | |
| GGGTCGGCGAAGAAGGGGTT+CGG | + | chr8_1:76428401-76428420 | None:intergenic | 65.0% | |
| !! | GCACCTGCTGCTGCTGGTTC+AGG | - | chr8_1:76429009-76429028 | Msa1215170:CDS | 65.0% |
| ! | GCTGCTTTCCGTGCCCCTGT+TGG | - | chr8_1:76429995-76430014 | Msa1215170:CDS | 65.0% |
| GCTTTCCGTGCCCCTGTTGG+CGG | - | chr8_1:76429998-76430017 | Msa1215170:CDS | 65.0% | |
| TGGTGCATCGTATGGGCGCC+TGG | - | chr8_1:76431044-76431063 | Msa1215170:intron | 65.0% | |
| GCATCGTATGGGCGCCTGGT+TGG | - | chr8_1:76431048-76431067 | Msa1215170:intron | 65.0% | |
| ACCGGAGCTTCCGAACGTGG+AGG | + | chr8_1:76431468-76431487 | None:intergenic | 65.0% | |
| AGACGCCGCCAACAGGGGCA+CGG | + | chr8_1:76430006-76430025 | None:intergenic | 70.0% | |
| GGCGCCGCTTCTCTTCTCGG+TGG | - | chr8_1:76431123-76431142 | Msa1215170:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 76428062 | 76432677 | 76428062 | ID=Msa1215170;Name=Msa1215170 |
| chr8_1 | mRNA | 76428062 | 76432677 | 76428062 | ID=Msa1215170-mRNA-1;Parent=Msa1215170;Name=Msa1215170-mRNA-1;_AED=0.02;_eAED=0.02;_QI=1099|1|1|1|0.8|0.66|6|502|592 |
| chr8_1 | exon | 76428062 | 76428707 | 76428062 | ID=Msa1215170-mRNA-1:exon:26258;Parent=Msa1215170-mRNA-1 |
| chr8_1 | exon | 76428933 | 76430061 | 76428933 | ID=Msa1215170-mRNA-1:exon:26257;Parent=Msa1215170-mRNA-1 |
| chr8_1 | exon | 76430174 | 76430948 | 76430174 | ID=Msa1215170-mRNA-1:exon:26256;Parent=Msa1215170-mRNA-1 |
| chr8_1 | exon | 76431632 | 76431809 | 76431632 | ID=Msa1215170-mRNA-1:exon:26255;Parent=Msa1215170-mRNA-1 |
| chr8_1 | exon | 76431920 | 76432120 | 76431920 | ID=Msa1215170-mRNA-1:exon:26254;Parent=Msa1215170-mRNA-1 |
| chr8_1 | exon | 76432227 | 76432677 | 76432227 | ID=Msa1215170-mRNA-1:exon:26253;Parent=Msa1215170-mRNA-1 |
| chr8_1 | five_prime_UTR | 76432227 | 76432677 | 76432227 | ID=Msa1215170-mRNA-1:five_prime_utr;Parent=Msa1215170-mRNA-1 |
| chr8_1 | five_prime_UTR | 76431920 | 76432120 | 76431920 | ID=Msa1215170-mRNA-1:five_prime_utr;Parent=Msa1215170-mRNA-1 |
| chr8_1 | five_prime_UTR | 76431632 | 76431809 | 76431632 | ID=Msa1215170-mRNA-1:five_prime_utr;Parent=Msa1215170-mRNA-1 |
| chr8_1 | five_prime_UTR | 76430680 | 76430948 | 76430680 | ID=Msa1215170-mRNA-1:five_prime_utr;Parent=Msa1215170-mRNA-1 |
| chr8_1 | CDS | 76430174 | 76430679 | 76430174 | ID=Msa1215170-mRNA-1:cds;Parent=Msa1215170-mRNA-1 |
| chr8_1 | CDS | 76428933 | 76430061 | 76428933 | ID=Msa1215170-mRNA-1:cds;Parent=Msa1215170-mRNA-1 |
| chr8_1 | CDS | 76428564 | 76428707 | 76428564 | ID=Msa1215170-mRNA-1:cds;Parent=Msa1215170-mRNA-1 |
| chr8_1 | three_prime_UTR | 76428062 | 76428563 | 76428062 | ID=Msa1215170-mRNA-1:three_prime_utr;Parent=Msa1215170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
