AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0295030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295030 MtrunA17_Chr2g0328761 97.633 507 12 0 1 507 1 507 0.0 991
Msa0295030 MtrunA17_Chr3g0088471 59.579 522 177 3 16 506 17 535 0.0 605
Msa0295030 MtrunA17_Chr8g0352151 55.515 544 188 5 12 506 13 551 0.0 564
Msa0295030 MtrunA17_Chr8g0352171 60.734 354 139 0 154 507 35 388 4.17e-152 439
Msa0295030 MtrunA17_Chr5g0448591 43.067 476 236 3 31 506 109 549 2.76e-126 379
Msa0295030 MtrunA17_Chr7g0243421 44.195 267 149 0 239 505 4 270 2.22e-70 226
Msa0295030 MtrunA17_Chr7g0243411 45.498 211 81 2 29 236 110 289 8.98e-40 146
Msa0295030 MtrunA17_Chr4g0035751 25.527 474 284 14 36 495 95 513 1.00e-19 92.4
Msa0295030 MtrunA17_Chr4g0035741 25.208 480 289 15 36 500 108 532 5.76e-19 90.1
Msa0295030 MtrunA17_Chr4g0035791 24.000 475 301 11 36 500 106 530 3.04e-18 87.8
Msa0295030 MtrunA17_Chr8g0352161 72.549 51 14 0 66 116 3 53 1.01e-16 76.6
Msa0295030 MtrunA17_Chr4g0035811 24.421 475 299 13 36 500 134 558 3.77e-16 81.3
Msa0295030 MtrunA17_Chr4g0035761 24.319 477 297 15 36 500 109 533 6.27e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295030 AT1G51340.3 70.553 506 139 4 12 507 10 515 0.0 671
Msa0295030 AT1G51340.5 70.553 506 139 4 12 507 10 515 0.0 671
Msa0295030 AT1G51340.2 70.553 506 139 4 12 507 10 515 0.0 671
Msa0295030 AT1G51340.1 71.429 490 130 4 28 507 20 509 0.0 660
Msa0295030 AT3G08040.1 59.684 506 187 3 16 506 15 518 0.0 558
Msa0295030 AT1G51340.4 69.291 381 107 4 12 382 10 390 6.17e-168 480
Msa0295030 AT3G08040.2 58.911 404 155 2 103 506 22 414 5.60e-163 469
Msa0295030 AT4G38380.3 44.632 475 239 3 33 507 32 482 6.55e-128 382
Msa0295030 AT4G38380.2 44.632 475 239 3 33 507 104 554 1.83e-126 380
Msa0295030 AT4G38380.1 44.632 475 239 3 33 507 104 554 1.83e-126 380
Msa0295030 AT4G38380.4 44.754 467 234 3 41 507 2 444 2.47e-125 374
Msa0295030 AT4G38380.5 44.211 475 231 3 33 507 104 544 8.00e-125 376
Msa0295030 AT2G38330.1 44.654 477 230 2 31 507 73 515 5.36e-123 370
Msa0295030 AT2G21340.1 25.652 460 273 16 36 480 117 522 7.09e-17 84.0
Msa0295030 AT2G21340.2 25.217 460 272 16 36 480 117 519 9.70e-16 80.5
Msa0295030 AT4G39030.1 24.576 472 290 16 36 494 100 518 2.26e-15 79.3

Find 155 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAATCAGAAACGTCTTTA+AGG 0.166196 2_3:-47265860 None:intergenic
CTGGTGGATTCATTGGAATT+TGG 0.174098 2_3:+47269787 Msa0295030:CDS
GCTTCGTCAGCGCTATATTT+TGG 0.205113 2_3:+47267596 Msa0295030:CDS
ACATAATCATAGCTTATATT+TGG 0.219856 2_3:+47270047 Msa0295030:three_prime_UTR
ACTCATAATGACATGAAATA+TGG 0.232021 2_3:+47270261 Msa0295030:three_prime_UTR
ACGGCCTTCATTGGCCAATT+AGG 0.238684 2_3:+47266841 Msa0295030:CDS
TTCAAGTCTGTCTGCAAGTT+TGG 0.279500 2_3:+47268725 Msa0295030:CDS
GCGGATGGTCTGGCTGTTGC+CGG 0.285261 2_3:+47268766 Msa0295030:CDS
ATGCAGATGGGCGTGGTTCT+TGG 0.286776 2_3:+47269062 Msa0295030:intron
TATTTGATGGTGTCAACTTT+GGG 0.292922 2_3:+47269323 Msa0295030:CDS
TGGTTTCAGGCGATTCTTGC+AGG 0.293939 2_3:+47268864 Msa0295030:intron
TTCGCACTTGCATTCATTCT+TGG 0.295952 2_3:+47269086 Msa0295030:CDS
CTAAGACTATAGTGGAAATT+AGG 0.308006 2_3:+47265766 None:intergenic
AACATGATAACATACCTAAT+TGG 0.313690 2_3:-47266855 None:intergenic
AATTTCAAGTACTGCATTGC+AGG 0.318886 2_3:-47267862 None:intergenic
TGGTGGATTCATTGGAATTT+GGG 0.325300 2_3:+47269788 Msa0295030:CDS
GGACTTGTTTGAGACGAAAA+AGG 0.328496 2_3:-47265814 None:intergenic
AGAAAGGAATAACATGAAAA+AGG 0.329832 2_3:-47265930 None:intergenic
AAAATTACATAAACAACAAC+TGG 0.330624 2_3:+47270385 Msa0295030:three_prime_UTR
TGTTTGGCCTTTGTATTTGA+TGG 0.334770 2_3:+47269310 Msa0295030:CDS
AAAACCTTTATTGAACTTCA+TGG 0.337472 2_3:+47267664 Msa0295030:CDS
ATACAAAGGCCAAACAGTTC+AGG 0.350521 2_3:-47269303 None:intergenic
AACTCTTTGGTTTCAGCATC+CGG 0.351723 2_3:-47267389 None:intergenic
ACCTATTTGCACTTTCTTCA+AGG 0.352355 2_3:+47266478 Msa0295030:CDS
TGAAAGCTTTAATGTAGTTA+AGG 0.364155 2_3:+47267541 Msa0295030:CDS
AACTGCTACCCGAGTATTGC+AGG 0.367216 2_3:+47268923 Msa0295030:CDS
CATGAAATATGGGATCAAAA+AGG 0.368550 2_3:+47270272 Msa0295030:three_prime_UTR
TCATCTGCTGGTGGATTCAT+TGG 0.373915 2_3:+47269780 Msa0295030:CDS
TTTCACCTAAAACAGTGAAT+TGG 0.378901 2_3:+47266398 Msa0295030:intron
GCCCGCTGCAATGGCTTTGA+CGG 0.379476 2_3:+47266792 Msa0295030:CDS
CTTGCATTCATTCTTGGAAC+AGG 0.384448 2_3:+47269092 Msa0295030:CDS
TTATGATGCAGGATTGGAAC+TGG 0.389829 2_3:+47269969 Msa0295030:intron
TTTAATGTAGTTAAGGTTGA+TGG 0.390926 2_3:+47267548 Msa0295030:CDS
ACTCCCATGAAGTTCAATAA+AGG 0.391036 2_3:-47267668 None:intergenic
GTATTTAAATTAGACGATCT+TGG 0.391627 2_3:+47266745 Msa0295030:CDS
TACATACCAGTGGCATATAA+AGG 0.392262 2_3:-47267964 None:intergenic
CAGAAATAAGCAACGTTGCC+TGG 0.395145 2_3:-47267637 None:intergenic
GTCCCTTCTTGCGGATGGTC+TGG 0.395512 2_3:+47268756 Msa0295030:CDS
CATGATTGTGATATCTTGTT+GGG 0.399891 2_3:+47270169 Msa0295030:three_prime_UTR
TCTTCTTTCATTAGCGATGC+AGG 0.402072 2_3:+47267909 Msa0295030:CDS
TGGTCTGGCTGTTGCCGGGC+AGG 0.402764 2_3:+47268771 Msa0295030:CDS
AGGACTCAACTGAAATTAAC+AGG 0.404733 2_3:-47265985 None:intergenic
CTGTGAGCTTGCGTCGCTTA+AGG 0.406638 2_3:-47267330 None:intergenic
TCCTACACCTCATTAGAGTT+GGG 0.408785 2_3:+47269156 Msa0295030:CDS
TCTTCATTCTCAGGTTATAG+TGG 0.409610 2_3:+47269725 Msa0295030:intron
GTATTTGATGGTGTCAACTT+TGG 0.411044 2_3:+47269322 Msa0295030:CDS
AGAAATCATTTGAAAAGAAT+AGG 0.418081 2_3:+47270134 Msa0295030:three_prime_UTR
CACTCAACCCCTGAACTGTT+TGG 0.424826 2_3:+47269294 Msa0295030:CDS
CTCATAATGACATGAAATAT+GGG 0.425245 2_3:+47270262 Msa0295030:three_prime_UTR
ATGAGTTTAAGAGCCTTTGC+TGG 0.427946 2_3:+47269828 Msa0295030:CDS
TTGGTCGATACGGCCTTCAT+TGG 0.428017 2_3:+47266832 Msa0295030:CDS
TTGTGGTTCACATTAGTAAA+GGG 0.428110 2_3:+47270081 Msa0295030:three_prime_UTR
TTTCTGCGGTAAGAACTCTT+TGG 0.430202 2_3:-47267402 None:intergenic
AATTGCTTTGCCCGCTGCAA+TGG 0.438261 2_3:+47266783 Msa0295030:CDS
GTGATATCTTGTTGGGGCAT+CGG 0.441194 2_3:+47270176 Msa0295030:three_prime_UTR
CGACGCAAGCTCACAGGTAG+AGG 0.442007 2_3:+47267337 Msa0295030:CDS
GCCGTCAAAGCCATTGCAGC+GGG 0.444777 2_3:-47266793 None:intergenic
GCCCCACATTAACATATTTG+TGG 0.450475 2_3:+47265788 Msa0295030:five_prime_UTR
CTTGGAACAGGATTGCACTT+TGG 0.450496 2_3:+47269104 Msa0295030:CDS
TACTTGAAATTGAGATCTCT+TGG 0.450593 2_3:+47267874 Msa0295030:CDS
TGCAGGATTGGAACTGGGTC+AGG 0.452693 2_3:+47269975 Msa0295030:intron
GGCTGATCCTATAGCATCAT+TGG 0.454668 2_3:+47266813 Msa0295030:CDS
GCATGATTGTGATATCTTGT+TGG 0.456697 2_3:+47270168 Msa0295030:three_prime_UTR
CAGGACCATGGGAATTCCTT+AGG 0.460543 2_3:+47269994 Msa0295030:CDS
AGGAGCTAAGTGCGCTAGCC+TGG 0.461068 2_3:+47270014 Msa0295030:exon
CTTGGAAGCTGCGACACCTC+CGG 0.465998 2_3:+47267370 Msa0295030:CDS
TCCTTGAAGAAAGTGCAAAT+AGG 0.466690 2_3:-47266479 None:intergenic
AATTGCAGATGTTTGATGCT+TGG 0.468820 2_3:-47268362 None:intergenic
ATTGTGGTTCACATTAGTAA+AGG 0.475969 2_3:+47270080 Msa0295030:three_prime_UTR
TGCAGGTGCATTTGCTAACA+AGG 0.477862 2_3:+47268881 Msa0295030:CDS
TACAAAGGCCAAACAGTTCA+GGG 0.478905 2_3:-47269302 None:intergenic
CGGATGGTCTGGCTGTTGCC+GGG 0.479805 2_3:+47268767 Msa0295030:CDS
AAACCTTTATTGAACTTCAT+GGG 0.481789 2_3:+47267665 Msa0295030:CDS
GCACTTTCTTCAAGGATGCT+AGG 0.484597 2_3:+47266486 Msa0295030:CDS
TGGAACTGGGTCAGGACCAT+GGG 0.486703 2_3:+47269983 Msa0295030:CDS
CCTACTGCAGCAAGCTCCAC+TGG 0.487433 2_3:-47267218 None:intergenic
GTATCGACCAATGATGCTAT+AGG 0.489373 2_3:-47266820 None:intergenic
ATTTGGCCACAGTTTGATTG+TGG 0.495286 2_3:+47270064 Msa0295030:three_prime_UTR
GTCCTACACCTCATTAGAGT+TGG 0.498396 2_3:+47269155 Msa0295030:CDS
TGCTAACAAGGACTATGAAA+AGG 0.500938 2_3:+47268893 Msa0295030:CDS
GCAGTGTCCCTTCTTGCGGA+TGG 0.503081 2_3:+47268751 Msa0295030:CDS
CTTGTTTGTTCAAACTCCAC+AGG 0.509281 2_3:-47268325 None:intergenic
GCTAGCGCACTTAGCTCCTA+AGG 0.510397 2_3:-47270010 None:intergenic
CATACCTAATTGGCCAATGA+AGG 0.513148 2_3:-47266845 None:intergenic
AGTCTGTCTGCAAGTTTGGT+TGG 0.514353 2_3:+47268729 Msa0295030:CDS
GTAGCAGTCTAAGACTATAG+TGG 0.519360 2_3:+47265758 None:intergenic
CCTCATTAGAGTTGGGGTCC+CGG 0.519902 2_3:+47269163 Msa0295030:CDS
CCAGTGGAGCTTGCTGCAGT+AGG 0.523504 2_3:+47267218 Msa0295030:CDS
GATTATGTATTGATGTTGCC+AGG 0.524125 2_3:-47270032 None:intergenic
AGCTCACAGGTAGAGGAGAA+TGG 0.528973 2_3:+47267344 Msa0295030:CDS
GTCCACAAATATGTTAATGT+GGG 0.533008 2_3:-47265790 None:intergenic
TGTAGAACACCTGCAATACT+CGG 0.533112 2_3:-47268932 None:intergenic
CTTAAGCGACGCAAGCTCAC+AGG 0.533775 2_3:+47267331 Msa0295030:CDS
CTTCTTTCATTAGCGATGCA+GGG 0.537717 2_3:+47267910 Msa0295030:CDS
TGCAGATGTTTGATGCTTGG+AGG 0.538167 2_3:-47268359 None:intergenic
TTGGAACTGGGTCAGGACCA+TGG 0.539529 2_3:+47269982 Msa0295030:CDS
CAGCCAGACCATCCGCAAGA+AGG 0.542007 2_3:-47268759 None:intergenic
TGTCCACAAATATGTTAATG+TGG 0.542132 2_3:-47265791 None:intergenic
TAATATAATGCAGATGGGCG+TGG 0.542994 2_3:+47269055 Msa0295030:intron
TCTGCAATCTGAAAGAAGAA+AGG 0.543648 2_3:-47265946 None:intergenic
GGTAGAGGAGAATGGATGCT+TGG 0.544369 2_3:+47267352 Msa0295030:CDS
TATAGCATCATTGGTCGATA+CGG 0.544448 2_3:+47266822 Msa0295030:CDS
GAGCCTTTGCTGGCTTCTTG+AGG 0.546982 2_3:+47269838 Msa0295030:CDS
AAAACTCCTTTATATGCCAC+TGG 0.548051 2_3:+47267958 Msa0295030:CDS
ACGTTGCCTGGACGAGGCCA+AGG 0.550365 2_3:-47267625 None:intergenic
AGGTATCCTTGGCCTCGTCC+AGG 0.551223 2_3:+47267619 Msa0295030:CDS
GTATTCCGCATGGGTGTCAA+CGG 0.551236 2_3:+47268104 Msa0295030:CDS
CTCTATTCAATCAAGCATCA+AGG 0.567403 2_3:+47267252 Msa0295030:CDS
TGCTTGATTGAATAGAGCTA+TGG 0.567545 2_3:-47267246 None:intergenic
GGTAACATTCTGCGTGACAC+TGG 0.567656 2_3:+47268657 Msa0295030:CDS
GTTGGCAGTGTCCCTTCTTG+CGG 0.568099 2_3:+47268747 Msa0295030:CDS
GAGATCTCTTGGTGCTCCTG+CGG 0.568151 2_3:+47267885 Msa0295030:CDS
TGCATATTCAGCCTTCTCCA+TGG 0.574962 2_3:+47269357 Msa0295030:CDS
GCAACAAAACAAAACAACAT+TGG 0.576245 2_3:-47265835 None:intergenic
AGCCAGACCATCCGCAAGAA+GGG 0.579779 2_3:-47268758 None:intergenic
TATTAGATAGATACACTTGG+AGG 0.580107 2_3:-47270239 None:intergenic
GTGAATTGGCACTTCAGAGA+TGG 0.580452 2_3:+47266412 Msa0295030:intron
TAAGCAACGTTGCCTGGACG+AGG 0.584099 2_3:-47267631 None:intergenic
CATTTGAAAAGAATAGGCAT+TGG 0.586165 2_3:+47270140 Msa0295030:three_prime_UTR
TGAATCATATCTCACCTGCC+CGG 0.590246 2_3:-47268785 None:intergenic
GAAGTTACATACCATGGAGA+AGG 0.599442 2_3:-47269368 None:intergenic
ACAGACTTGAAATGCAGCCA+TGG 0.602463 2_3:-47268713 None:intergenic
ATTTGATGGTGTCAACTTTG+GGG 0.602557 2_3:+47269324 Msa0295030:CDS
CCGGGACCCCAACTCTAATG+AGG 0.604305 2_3:-47269163 None:intergenic
TACTTTCAGCTATACTCCTG+TGG 0.608095 2_3:+47268309 Msa0295030:CDS
TACTCGGGTAGCAGTTGTTG+AGG 0.609106 2_3:-47268916 None:intergenic
TGCATTGCAGGATGTAGCAT+AGG 0.609472 2_3:-47267850 None:intergenic
GAAGTTGTGACACTGACTAG+TGG 0.610876 2_3:-47267287 None:intergenic
GCTAATGAAAGAAGAACCGC+AGG 0.618157 2_3:-47267901 None:intergenic
ATTGGTCTCTACAGGTCCAG+TGG 0.619428 2_3:+47267202 Msa0295030:intron
GTAGAACACCTGCAATACTC+GGG 0.620615 2_3:-47268931 None:intergenic
CTATACATCTTCTAAAGCTG+AGG 0.626582 2_3:-47270210 None:intergenic
AAGTTGTGACACTGACTAGT+GGG 0.626798 2_3:-47267286 None:intergenic
CCCCAACTCTAATGAGGTGT+AGG 0.629440 2_3:-47269157 None:intergenic
AGCCGTCAAAGCCATTGCAG+CGG 0.630911 2_3:-47266794 None:intergenic
ATTATTCATGAGAGTCATTG+CGG 0.631200 2_3:+47268636 Msa0295030:CDS
TATGATGCAGGATTGGAACT+GGG 0.631342 2_3:+47269970 Msa0295030:intron
AGGTTGATGGAAGTAAGAGA+AGG 0.632842 2_3:+47267561 Msa0295030:CDS
ACACCACGGATCAACATCCA+TGG 0.637699 2_3:+47268696 Msa0295030:CDS
TTACCTCAAGAAGCCAGCAA+AGG 0.639714 2_3:-47269841 None:intergenic
CTGAGATATAACATGTGCAA+TGG 0.641731 2_3:-47268132 None:intergenic
CCTACACCTCATTAGAGTTG+GGG 0.644035 2_3:+47269157 Msa0295030:CDS
GTTGACACCATCAAATACAA+AGG 0.646571 2_3:-47269317 None:intergenic
TCCACAAATATGTTAATGTG+GGG 0.651252 2_3:-47265789 None:intergenic
GAGTATTAGATAGATACACT+TGG 0.652013 2_3:-47270242 None:intergenic
TATAGCGCTGACGAAGCTGA+AGG 0.652574 2_3:-47267590 None:intergenic
AAATTACATAAACAACAACT+GGG 0.667467 2_3:+47270386 Msa0295030:three_prime_UTR
TCTTTGGTTTCAGCATCCGG+AGG 0.669170 2_3:-47267386 None:intergenic
TAGCTCCTAAGGAATTCCCA+TGG 0.675106 2_3:-47269999 None:intergenic
ATGATTGTGATATCTTGTTG+GGG 0.678987 2_3:+47270170 Msa0295030:three_prime_UTR
ACAAAGGCCAAACAGTTCAG+GGG 0.700393 2_3:-47269301 None:intergenic
TGTGAACCACAATCAAACTG+TGG 0.714063 2_3:-47270070 None:intergenic
GCATCATTAGCTGCACACCA+CGG 0.714665 2_3:+47268682 Msa0295030:CDS
CAGCCATGGATGTTGATCCG+TGG 0.715332 2_3:-47268699 None:intergenic
CTGCACCGTTGACACCCATG+CGG 0.715966 2_3:-47268109 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATATATCATAATTTAG+AGG - chr2_3:47266281-47266300 None:intergenic 10.0%
!!! ACATATTCAATTTTTTTTGT+TGG + chr2_3:47266213-47266232 Msa0295030:intron 15.0%
!! AAAAATTAGAAGAAACAAAA+AGG - chr2_3:47266328-47266347 None:intergenic 15.0%
!!! TAGTTAGCAATTATATTTTT+AGG + chr2_3:47266591-47266610 Msa0295030:intron 15.0%
!! AAAAATGAACTAAAAATATG+AGG - chr2_3:47266639-47266658 None:intergenic 15.0%
!! AAAATATGAATAGAACTATA+GGG + chr2_3:47267066-47267085 Msa0295030:intron 15.0%
!!! ACTTAATTACATTGATTATT+TGG - chr2_3:47267134-47267153 None:intergenic 15.0%
!! TATAGTTTAATACAGATTTA+AGG + chr2_3:47268189-47268208 Msa0295030:intron 15.0%
!! GTATAAACTTTAAATAACAT+TGG - chr2_3:47268504-47268523 None:intergenic 15.0%
!! TTAAAGTTTATACACAAATT+TGG + chr2_3:47268511-47268530 Msa0295030:intron 15.0%
!! TAATTATAATATAATGCAGA+TGG + chr2_3:47269049-47269068 Msa0295030:intron 15.0%
!! AATTATAATATAATGCAGAT+GGG + chr2_3:47269050-47269069 Msa0295030:intron 15.0%
!!! AAATTTCTCCTTATTTTTTT+AGG + chr2_3:47270106-47270125 Msa0295030:three_prime_UTR 15.0%
!!! TTTATGTAATTTTGTCTTTT+GGG - chr2_3:47270378-47270397 None:intergenic 15.0%
!! AAAAAATTGAATATGTATCG+AGG - chr2_3:47266209-47266228 None:intergenic 20.0%
!! AATATCACATTGATAAACAT+TGG + chr2_3:47266298-47266317 Msa0295030:intron 20.0%
!! AATAATTGAAAAAATTGTGG+AGG - chr2_3:47266534-47266553 None:intergenic 20.0%
!! CACAATAATTGAAAAAATTG+TGG - chr2_3:47266537-47266556 None:intergenic 20.0%
!! AAAATATAATTGCTAACTAG+AGG - chr2_3:47266590-47266609 None:intergenic 20.0%
!! GAAAATATGAATAGAACTAT+AGG + chr2_3:47267065-47267084 Msa0295030:intron 20.0%
!! ACGATGATTGAAAAATAATA+TGG + chr2_3:47267808-47267827 Msa0295030:intron 20.0%
!!! ATAATATGGATTATTTGTAC+AGG + chr2_3:47267822-47267841 Msa0295030:intron 20.0%
!! AATTTATTCGTGTTCAAATT+TGG + chr2_3:47269187-47269206 Msa0295030:intron 20.0%
!! ACATAATCATAGCTTATATT+TGG + chr2_3:47270047-47270066 Msa0295030:three_prime_UTR 20.0%
!! AGAAATCATTTGAAAAGAAT+AGG + chr2_3:47270134-47270153 Msa0295030:three_prime_UTR 20.0%
!!! TGAAAACAATTTTACATGTA+CGG + chr2_3:47270315-47270334 Msa0295030:three_prime_UTR 20.0%
!!! GTTTATGTAATTTTGTCTTT+TGG - chr2_3:47270379-47270398 None:intergenic 20.0%
!! AAAATTACATAAACAACAAC+TGG + chr2_3:47270385-47270404 Msa0295030:three_prime_UTR 20.0%
!! AAATTACATAAACAACAACT+GGG + chr2_3:47270386-47270405 Msa0295030:three_prime_UTR 20.0%
! TATAATCAGAAACGTCTTTA+AGG - chr2_3:47265863-47265882 None:intergenic 25.0%
! AGAAAGGAATAACATGAAAA+AGG - chr2_3:47265933-47265952 None:intergenic 25.0%
! TGAAAAATAACACTATCTCA+AGG - chr2_3:47266048-47266067 None:intergenic 25.0%
!! ACCTTTTCTTTTCATTATGA+TGG + chr2_3:47266078-47266097 Msa0295030:intron 25.0%
! ACCATCATAATGAAAAGAAA+AGG - chr2_3:47266082-47266101 None:intergenic 25.0%
! AATTAGAAGAAACAAAAAGG+TGG - chr2_3:47266325-47266344 None:intergenic 25.0%
!!! AAAGAGAGTTTGTTTTCTAT+AGG + chr2_3:47266440-47266459 Msa0295030:CDS 25.0%
! TTTCATAATTCCATGTACTT+AGG + chr2_3:47266689-47266708 Msa0295030:intron 25.0%
! GTATTTAAATTAGACGATCT+TGG + chr2_3:47266745-47266764 Msa0295030:CDS 25.0%
! AACATGATAACATACCTAAT+TGG - chr2_3:47266858-47266877 None:intergenic 25.0%
!! TAGTAATCAGGAAATTTTCT+TGG - chr2_3:47267485-47267504 None:intergenic 25.0%
!! TGAAAGCTTTAATGTAGTTA+AGG + chr2_3:47267541-47267560 Msa0295030:CDS 25.0%
! TTTAATGTAGTTAAGGTTGA+TGG + chr2_3:47267548-47267567 Msa0295030:CDS 25.0%
! AAAACCTTTATTGAACTTCA+TGG + chr2_3:47267664-47267683 Msa0295030:CDS 25.0%
! AAACCTTTATTGAACTTCAT+GGG + chr2_3:47267665-47267684 Msa0295030:CDS 25.0%
!! ATATCTCAGTATGTTTTACT+TGG + chr2_3:47268146-47268165 Msa0295030:intron 25.0%
! CAAAATCAAATAGAAGCAAA+AGG - chr2_3:47268250-47268269 None:intergenic 25.0%
! TTCAAATTAACTGTAAATGC+AGG + chr2_3:47268282-47268301 Msa0295030:intron 25.0%
!! TTATAAACCCTTACCATTTT+TGG - chr2_3:47268399-47268418 None:intergenic 25.0%
! AATCCTTATTATCTACGAAA+TGG + chr2_3:47268417-47268436 Msa0295030:intron 25.0%
! AAACCATTTCGTAGATAATA+AGG - chr2_3:47268423-47268442 None:intergenic 25.0%
!!! AAACCAAGATGATGTTTTTT+CGG - chr2_3:47268850-47268869 None:intergenic 25.0%
! GTTTATAGTCCTTGTTAAAA+AGG - chr2_3:47268977-47268996 None:intergenic 25.0%
! TTTGAACACGAATAAATTAC+CGG - chr2_3:47269185-47269204 None:intergenic 25.0%
! AATGAAAGTTCTACTCTTTA+GGG - chr2_3:47269243-47269262 None:intergenic 25.0%
! ATTAAAATATAGACTCTCCA+TGG - chr2_3:47269437-47269456 None:intergenic 25.0%
! TTTCAATGATTCTTCAAGAT+TGG - chr2_3:47269465-47269484 None:intergenic 25.0%
!!! AGAATATGAAAGAAAGCATT+AGG - chr2_3:47269889-47269908 None:intergenic 25.0%
! TCTCAAGACCTAAAAAAATA+AGG - chr2_3:47270117-47270136 None:intergenic 25.0%
! ACTCATAATGACATGAAATA+TGG + chr2_3:47270261-47270280 Msa0295030:three_prime_UTR 25.0%
! CTCATAATGACATGAAATAT+GGG + chr2_3:47270262-47270281 Msa0295030:three_prime_UTR 25.0%
!! ACGGATTTCTTTTCTTTTTT+TGG + chr2_3:47270334-47270353 Msa0295030:three_prime_UTR 25.0%
!! CGGATTTCTTTTCTTTTTTT+GGG + chr2_3:47270335-47270354 Msa0295030:three_prime_UTR 25.0%
TCCACAAATATGTTAATGTG+GGG - chr2_3:47265792-47265811 None:intergenic 30.0%
GTCCACAAATATGTTAATGT+GGG - chr2_3:47265793-47265812 None:intergenic 30.0%
TGTCCACAAATATGTTAATG+TGG - chr2_3:47265794-47265813 None:intergenic 30.0%
GCAACAAAACAAAACAACAT+TGG - chr2_3:47265838-47265857 None:intergenic 30.0%
AACTCTAGCTATGAAATCAA+TGG - chr2_3:47266012-47266031 None:intergenic 30.0%
TTGATTTCATAGCTAGAGTT+TGG + chr2_3:47266012-47266031 Msa0295030:intron 30.0%
!!! TTGTTTTTTCTTTGAGTGAG+AGG + chr2_3:47266113-47266132 Msa0295030:intron 30.0%
!!! TGTTTTTTCTTTGAGTGAGA+GGG + chr2_3:47266114-47266133 Msa0295030:intron 30.0%
GTCAGTATTTAACCACATAA+TGG + chr2_3:47266235-47266254 Msa0295030:intron 30.0%
CACATATATTCTCCATTATG+TGG - chr2_3:47266250-47266269 None:intergenic 30.0%
TTTCACCTAAAACAGTGAAT+TGG + chr2_3:47266398-47266417 Msa0295030:intron 30.0%
!! GTTTGTTTTCTATAGGTGAT+TGG + chr2_3:47266447-47266466 Msa0295030:CDS 30.0%
GAAAAAATTGTGGAGGAAAT+AGG - chr2_3:47266527-47266546 None:intergenic 30.0%
AAGAGTTAAACCTAAGTACA+TGG - chr2_3:47266702-47266721 None:intergenic 30.0%
TCTTGCTCTACTAATTTGAA+CGG - chr2_3:47266960-47266979 None:intergenic 30.0%
!! CATCAAGTGTTGGATATTAT+TGG + chr2_3:47267184-47267203 Msa0295030:intron 30.0%
ACATTCGTATGTTAGTAATC+AGG - chr2_3:47267497-47267516 None:intergenic 30.0%
ACATTACGAGACTTACTTAT+AGG + chr2_3:47267716-47267735 Msa0295030:intron 30.0%
TACTTGAAATTGAGATCTCT+TGG + chr2_3:47267874-47267893 Msa0295030:CDS 30.0%
CGGAATACAAAAATGAAAAG+CGG - chr2_3:47268092-47268111 None:intergenic 30.0%
!! TTTCATTTTTGTATTCCGCA+TGG + chr2_3:47268094-47268113 Msa0295030:CDS 30.0%
!! TTCATTTTTGTATTCCGCAT+GGG + chr2_3:47268095-47268114 Msa0295030:CDS 30.0%
AGGAAATTAAGAGACAAGAT+AGG - chr2_3:47268230-47268249 None:intergenic 30.0%
! TTCAGCAGAGATATATTTTC+TGG + chr2_3:47268456-47268475 Msa0295030:intron 30.0%
! TCAGCAGAGATATATTTTCT+GGG + chr2_3:47268457-47268476 Msa0295030:intron 30.0%
!! ATTACCGATTTGAACGTAAA+AGG - chr2_3:47268570-47268589 None:intergenic 30.0%
ATGACAATAATGAAATGGGA+AGG - chr2_3:47268605-47268624 None:intergenic 30.0%
CTGCATGACAATAATGAAAT+GGG - chr2_3:47268609-47268628 None:intergenic 30.0%
ATTATTCATGAGAGTCATTG+CGG + chr2_3:47268636-47268655 Msa0295030:CDS 30.0%
GATATGATTCATTACTCTCT+CGG + chr2_3:47268797-47268816 Msa0295030:intron 30.0%
AAAAACATCATCTTGGTTTC+AGG + chr2_3:47268851-47268870 Msa0295030:intron 30.0%
TTGAACACGAATAAATTACC+GGG - chr2_3:47269184-47269203 None:intergenic 30.0%
ATTCGTGTTCAAATTTGGAA+AGG + chr2_3:47269192-47269211 Msa0295030:intron 30.0%
GAATGAAAGTTCTACTCTTT+AGG - chr2_3:47269244-47269263 None:intergenic 30.0%
!! TATTTGATGGTGTCAACTTT+GGG + chr2_3:47269323-47269342 Msa0295030:CDS 30.0%
GATCAAAGCAGATTAAAACA+TGG - chr2_3:47269396-47269415 None:intergenic 30.0%
TCAATGAACTATTATGATGC+AGG + chr2_3:47269958-47269977 Msa0295030:intron 30.0%
ATTGTGGTTCACATTAGTAA+AGG + chr2_3:47270080-47270099 Msa0295030:three_prime_UTR 30.0%
TTGTGGTTCACATTAGTAAA+GGG + chr2_3:47270081-47270100 Msa0295030:three_prime_UTR 30.0%
CATTTGAAAAGAATAGGCAT+TGG + chr2_3:47270140-47270159 Msa0295030:three_prime_UTR 30.0%
CATGATTGTGATATCTTGTT+GGG + chr2_3:47270169-47270188 Msa0295030:three_prime_UTR 30.0%
ATGATTGTGATATCTTGTTG+GGG + chr2_3:47270170-47270189 Msa0295030:three_prime_UTR 30.0%
TATTAGATAGATACACTTGG+AGG - chr2_3:47270242-47270261 None:intergenic 30.0%
GAGTATTAGATAGATACACT+TGG - chr2_3:47270245-47270264 None:intergenic 30.0%
CATGAAATATGGGATCAAAA+AGG + chr2_3:47270272-47270291 Msa0295030:three_prime_UTR 30.0%
TCTGCAATCTGAAAGAAGAA+AGG - chr2_3:47265949-47265968 None:intergenic 35.0%
AGGACTCAACTGAAATTAAC+AGG - chr2_3:47265988-47266007 None:intergenic 35.0%
CTAGCTATGAAATCAATGGA+AGG - chr2_3:47266008-47266027 None:intergenic 35.0%
CATCAACTTAACAACAGTGA+TGG - chr2_3:47266180-47266199 None:intergenic 35.0%
! AAGTGCCAATTCACTGTTTT+AGG - chr2_3:47266406-47266425 None:intergenic 35.0%
ACCTATTTGCACTTTCTTCA+AGG + chr2_3:47266478-47266497 Msa0295030:CDS 35.0%
! TCCTTGAAGAAAGTGCAAAT+AGG - chr2_3:47266482-47266501 None:intergenic 35.0%
! AATACTAGTCTGCAGTAAGA+AGG - chr2_3:47266730-47266749 None:intergenic 35.0%
TATAGCATCATTGGTCGATA+CGG + chr2_3:47266822-47266841 Msa0295030:CDS 35.0%
!!! GCTATGTCTATCGACTTTTT+TGG - chr2_3:47266938-47266957 None:intergenic 35.0%
TGTTGATCCAACTCGAAAAA+TGG + chr2_3:47267097-47267116 Msa0295030:intron 35.0%
!!! CTTCTATCCATTTTTCGAGT+TGG - chr2_3:47267107-47267126 None:intergenic 35.0%
TGTTATAACGCATCAAGTGT+TGG + chr2_3:47267174-47267193 Msa0295030:intron 35.0%
! TGGATATTATTGGTCTCTAC+AGG + chr2_3:47267194-47267213 Msa0295030:intron 35.0%
TGCTTGATTGAATAGAGCTA+TGG - chr2_3:47267249-47267268 None:intergenic 35.0%
CTCTATTCAATCAAGCATCA+AGG + chr2_3:47267252-47267271 Msa0295030:CDS 35.0%
! AGAAGAATGGTACTTTTCTG+CGG - chr2_3:47267419-47267438 None:intergenic 35.0%
CTATCAGGAAAGTAGAAGAA+TGG - chr2_3:47267432-47267451 None:intergenic 35.0%
! TGTGTTGACAAACTCAGATT+CGG + chr2_3:47267514-47267533 Msa0295030:intron 35.0%
!!! CTATATTTTGGAGGTATCCT+TGG + chr2_3:47267608-47267627 Msa0295030:CDS 35.0%
ACTCCCATGAAGTTCAATAA+AGG - chr2_3:47267671-47267690 None:intergenic 35.0%
GGTCGAATCATTAAAGATGT+AGG - chr2_3:47267776-47267795 None:intergenic 35.0%
TTAATGATTCGACCTCGTAT+CGG + chr2_3:47267782-47267801 Msa0295030:intron 35.0%
! AATTTCAAGTACTGCATTGC+AGG - chr2_3:47267865-47267884 None:intergenic 35.0%
AAAACTCCTTTATATGCCAC+TGG + chr2_3:47267958-47267977 Msa0295030:CDS 35.0%
TACATACCAGTGGCATATAA+AGG - chr2_3:47267967-47267986 None:intergenic 35.0%
!! GTATGTTTGTTGTAATCCAG+TGG + chr2_3:47268037-47268056 Msa0295030:intron 35.0%
CTGAGATATAACATGTGCAA+TGG - chr2_3:47268135-47268154 None:intergenic 35.0%
AATTGCAGATGTTTGATGCT+TGG - chr2_3:47268365-47268384 None:intergenic 35.0%
!! TTCGATCGATTTGCCAAAAA+TGG + chr2_3:47268383-47268402 Msa0295030:CDS 35.0%
! TCGATTTGCCAAAAATGGTA+AGG + chr2_3:47268388-47268407 Msa0295030:intron 35.0%
CGATTTGCCAAAAATGGTAA+GGG + chr2_3:47268389-47268408 Msa0295030:intron 35.0%
! CAGCAGAGATATATTTTCTG+GGG + chr2_3:47268458-47268477 Msa0295030:intron 35.0%
! CACTCCTTTTACGTTCAAAT+CGG + chr2_3:47268563-47268582 Msa0295030:intron 35.0%
CCTGCATGACAATAATGAAA+TGG - chr2_3:47268610-47268629 None:intergenic 35.0%
CCATTTCATTATTGTCATGC+AGG + chr2_3:47268607-47268626 Msa0295030:intron 35.0%
CTTCCGAAAAAACATCATCT+TGG + chr2_3:47268844-47268863 Msa0295030:intron 35.0%
TGCTAACAAGGACTATGAAA+AGG + chr2_3:47268893-47268912 Msa0295030:CDS 35.0%
! ATCGCTGATCCTTTTTAACA+AGG + chr2_3:47268965-47268984 Msa0295030:intron 35.0%
TTCAAAAAGCAATTAGCGAG+CGG - chr2_3:47269001-47269020 None:intergenic 35.0%
! TGTTTGGCCTTTGTATTTGA+TGG + chr2_3:47269310-47269329 Msa0295030:CDS 35.0%
GTTGACACCATCAAATACAA+AGG - chr2_3:47269320-47269339 None:intergenic 35.0%
!! GTATTTGATGGTGTCAACTT+TGG + chr2_3:47269322-47269341 Msa0295030:CDS 35.0%
!! ATTTGATGGTGTCAACTTTG+GGG + chr2_3:47269324-47269343 Msa0295030:CDS 35.0%
ATGGATGAAGTTACATACCA+TGG - chr2_3:47269377-47269396 None:intergenic 35.0%
!! TTTATTTTCAGCCTTCTCCA+TGG + chr2_3:47269417-47269436 Msa0295030:intron 35.0%
GATGCAGTTTCAAATATACG+CGG + chr2_3:47269487-47269506 Msa0295030:intron 35.0%
TGTTTGTGTTAGCGCTTTAT+AGG + chr2_3:47269609-47269628 Msa0295030:intron 35.0%
AAAACATTGTAGCGAGAGTT+TGG - chr2_3:47269644-47269663 None:intergenic 35.0%
ATGAAGTTAACGACGATTAG+TGG + chr2_3:47269683-47269702 Msa0295030:intron 35.0%
TCATGTCATTCTTCATTCTC+AGG + chr2_3:47269716-47269735 Msa0295030:intron 35.0%
TCTTCATTCTCAGGTTATAG+TGG + chr2_3:47269725-47269744 Msa0295030:intron 35.0%
!!! CTACTTATTTTGTCATCTGC+TGG + chr2_3:47269768-47269787 Msa0295030:CDS 35.0%
!! TGGTGGATTCATTGGAATTT+GGG + chr2_3:47269788-47269807 Msa0295030:CDS 35.0%
GAACTATTATGATGCAGGAT+TGG + chr2_3:47269963-47269982 Msa0295030:intron 35.0%
! GATTATGTATTGATGTTGCC+AGG - chr2_3:47270035-47270054 None:intergenic 35.0%
GCATGATTGTGATATCTTGT+TGG + chr2_3:47270168-47270187 Msa0295030:three_prime_UTR 35.0%
!! CTATACATCTTCTAAAGCTG+AGG - chr2_3:47270213-47270232 None:intergenic 35.0%
GCCCCACATTAACATATTTG+TGG + chr2_3:47265788-47265807 Msa0295030:five_prime_UTR 40.0%
! GGACTTGTTTGAGACGAAAA+AGG - chr2_3:47265817-47265836 None:intergenic 40.0%
! GTATCGACCAATGATGCTAT+AGG - chr2_3:47266823-47266842 None:intergenic 40.0%
CATACCTAATTGGCCAATGA+AGG - chr2_3:47266848-47266867 None:intergenic 40.0%
CTCAAATCTTGTGCATGTGT+TGG - chr2_3:47266997-47267016 None:intergenic 40.0%
TATCCATTCACTTGTGAGAC+AGG - chr2_3:47267029-47267048 None:intergenic 40.0%
! AAGTTGTGACACTGACTAGT+GGG - chr2_3:47267289-47267308 None:intergenic 40.0%
! CAGTGTCACAACTTCTTTTG+TGG + chr2_3:47267295-47267314 Msa0295030:CDS 40.0%
! AACTCTTTGGTTTCAGCATC+CGG - chr2_3:47267392-47267411 None:intergenic 40.0%
TTTCTGCGGTAAGAACTCTT+TGG - chr2_3:47267405-47267424 None:intergenic 40.0%
! GGTTTTCCTGTTGAGAAACA+AGG - chr2_3:47267464-47267483 None:intergenic 40.0%
!! AGGTTGATGGAAGTAAGAGA+AGG + chr2_3:47267561-47267580 Msa0295030:CDS 40.0%
TCTTCTTTCATTAGCGATGC+AGG + chr2_3:47267909-47267928 Msa0295030:CDS 40.0%
CTTCTTTCATTAGCGATGCA+GGG + chr2_3:47267910-47267929 Msa0295030:CDS 40.0%
TACTTTCAGCTATACTCCTG+TGG + chr2_3:47268309-47268328 Msa0295030:CDS 40.0%
CTTGTTTGTTCAAACTCCAC+AGG - chr2_3:47268328-47268347 None:intergenic 40.0%
TGAACGTAAAAGGAGTGACA+TGG - chr2_3:47268560-47268579 None:intergenic 40.0%
TTCAAGTCTGTCTGCAAGTT+TGG + chr2_3:47268725-47268744 Msa0295030:CDS 40.0%
TGTAGAACACCTGCAATACT+CGG - chr2_3:47268935-47268954 None:intergenic 40.0%
TAATATAATGCAGATGGGCG+TGG + chr2_3:47269055-47269074 Msa0295030:intron 40.0%
TTCGCACTTGCATTCATTCT+TGG + chr2_3:47269086-47269105 Msa0295030:CDS 40.0%
CTTGCATTCATTCTTGGAAC+AGG + chr2_3:47269092-47269111 Msa0295030:CDS 40.0%
TCCTACACCTCATTAGAGTT+GGG + chr2_3:47269156-47269175 Msa0295030:CDS 40.0%
TACAAAGGCCAAACAGTTCA+GGG - chr2_3:47269305-47269324 None:intergenic 40.0%
ATACAAAGGCCAAACAGTTC+AGG - chr2_3:47269306-47269325 None:intergenic 40.0%
GAAGTTACATACCATGGAGA+AGG - chr2_3:47269371-47269390 None:intergenic 40.0%
ATATAGACTCTCCATGGAGA+AGG - chr2_3:47269431-47269450 None:intergenic 40.0%
!!! CTTATTTTGTCATCTGCTGG+TGG + chr2_3:47269771-47269790 Msa0295030:CDS 40.0%
!! CTGGTGGATTCATTGGAATT+TGG + chr2_3:47269787-47269806 Msa0295030:CDS 40.0%
ATGAGTTTAAGAGCCTTTGC+TGG + chr2_3:47269828-47269847 Msa0295030:CDS 40.0%
TCCAAGACACTTGCAACATT+TGG + chr2_3:47269920-47269939 Msa0295030:intron 40.0%
TCCAAATGTTGCAAGTGTCT+TGG - chr2_3:47269924-47269943 None:intergenic 40.0%
TTATGATGCAGGATTGGAAC+TGG + chr2_3:47269969-47269988 Msa0295030:intron 40.0%
TATGATGCAGGATTGGAACT+GGG + chr2_3:47269970-47269989 Msa0295030:intron 40.0%
ATTTGGCCACAGTTTGATTG+TGG + chr2_3:47270064-47270083 Msa0295030:three_prime_UTR 40.0%
TGTGAACCACAATCAAACTG+TGG - chr2_3:47270073-47270092 None:intergenic 40.0%
GTGAATTGGCACTTCAGAGA+TGG + chr2_3:47266412-47266431 Msa0295030:intron 45.0%
GCACTTTCTTCAAGGATGCT+AGG + chr2_3:47266486-47266505 Msa0295030:CDS 45.0%
GGCTGATCCTATAGCATCAT+TGG + chr2_3:47266813-47266832 Msa0295030:CDS 45.0%
AAGCCTGTCTCACAAGTGAA+TGG + chr2_3:47267023-47267042 Msa0295030:intron 45.0%
! GAAGTTGTGACACTGACTAG+TGG - chr2_3:47267290-47267309 None:intergenic 45.0%
! CACAACTTCTTTTGTGGCTG+AGG + chr2_3:47267301-47267320 Msa0295030:CDS 45.0%
TCCTGTTGAGAAACAAGGCT+TGG - chr2_3:47267459-47267478 None:intergenic 45.0%
! GCTTCGTCAGCGCTATATTT+TGG + chr2_3:47267596-47267615 Msa0295030:CDS 45.0%
!! TCGTCAGCGCTATATTTTGG+AGG + chr2_3:47267599-47267618 Msa0295030:CDS 45.0%
CAGAAATAAGCAACGTTGCC+TGG - chr2_3:47267640-47267659 None:intergenic 45.0%
TGCATTGCAGGATGTAGCAT+AGG - chr2_3:47267853-47267872 None:intergenic 45.0%
GCTAATGAAAGAAGAACCGC+AGG - chr2_3:47267904-47267923 None:intergenic 45.0%
!! GTTTGTTGTAATCCAGTGGC+AGG + chr2_3:47268041-47268060 Msa0295030:intron 45.0%
TGCAGATGTTTGATGCTTGG+AGG - chr2_3:47268362-47268381 None:intergenic 45.0%
ACGTAAAAGGAGTGACATGG+AGG - chr2_3:47268557-47268576 None:intergenic 45.0%
ACAGACTTGAAATGCAGCCA+TGG - chr2_3:47268716-47268735 None:intergenic 45.0%
AGTCTGTCTGCAAGTTTGGT+TGG + chr2_3:47268729-47268748 Msa0295030:CDS 45.0%
TGAATCATATCTCACCTGCC+CGG - chr2_3:47268788-47268807 None:intergenic 45.0%
! TGCAGGTGCATTTGCTAACA+AGG + chr2_3:47268881-47268900 Msa0295030:CDS 45.0%
GTAGAACACCTGCAATACTC+GGG - chr2_3:47268934-47268953 None:intergenic 45.0%
CTTGGAACAGGATTGCACTT+TGG + chr2_3:47269104-47269123 Msa0295030:CDS 45.0%
GTCCTACACCTCATTAGAGT+TGG + chr2_3:47269155-47269174 Msa0295030:CDS 45.0%
CCTACACCTCATTAGAGTTG+GGG + chr2_3:47269157-47269176 Msa0295030:CDS 45.0%
GTTGAGTGAGTGCTACAAAC+TGG - chr2_3:47269282-47269301 None:intergenic 45.0%
ACAAAGGCCAAACAGTTCAG+GGG - chr2_3:47269304-47269323 None:intergenic 45.0%
TGCATATTCAGCCTTCTCCA+TGG + chr2_3:47269357-47269376 Msa0295030:CDS 45.0%
GCTAACACAAACACAGACAC+TGG - chr2_3:47269602-47269621 None:intergenic 45.0%
!! TCATCTGCTGGTGGATTCAT+TGG + chr2_3:47269780-47269799 Msa0295030:CDS 45.0%
TTACCTCAAGAAGCCAGCAA+AGG - chr2_3:47269844-47269863 None:intergenic 45.0%
TAGCTCCTAAGGAATTCCCA+TGG - chr2_3:47270002-47270021 None:intergenic 45.0%
GTGATATCTTGTTGGGGCAT+CGG + chr2_3:47270176-47270195 Msa0295030:three_prime_UTR 45.0%
!! AAGTTTATATAAAAATAAAT+TGG - chr2_3:47270424-47270443 None:intergenic 5.0%
!!! ATTTATTTTTATATAAACTT+TGG + chr2_3:47270424-47270443 Msa0295030:three_prime_UTR 5.0%
AATTGCTTTGCCCGCTGCAA+TGG + chr2_3:47266783-47266802 Msa0295030:CDS 50.0%
TTGGTCGATACGGCCTTCAT+TGG + chr2_3:47266832-47266851 Msa0295030:CDS 50.0%
ACGGCCTTCATTGGCCAATT+AGG + chr2_3:47266841-47266860 Msa0295030:CDS 50.0%
! ATTGGTCTCTACAGGTCCAG+TGG + chr2_3:47267202-47267221 Msa0295030:intron 50.0%
AGCTCACAGGTAGAGGAGAA+TGG + chr2_3:47267344-47267363 Msa0295030:CDS 50.0%
GGTAGAGGAGAATGGATGCT+TGG + chr2_3:47267352-47267371 Msa0295030:CDS 50.0%
! TCTTTGGTTTCAGCATCCGG+AGG - chr2_3:47267389-47267408 None:intergenic 50.0%
ACAAGGCTTGGCAGACTATC+AGG - chr2_3:47267447-47267466 None:intergenic 50.0%
!! GCCAAGCCTTGTTTCTCAAC+AGG + chr2_3:47267455-47267474 Msa0295030:intron 50.0%
!! TATAGCGCTGACGAAGCTGA+AGG - chr2_3:47267593-47267612 None:intergenic 50.0%
! AATCATCGTGTGCCGATACG+AGG - chr2_3:47267797-47267816 None:intergenic 50.0%
TGTCGACGCATACATACCAG+TGG - chr2_3:47267977-47267996 None:intergenic 50.0%
TTCGTCAAATCTCCTGCCAC+TGG - chr2_3:47268056-47268075 None:intergenic 50.0%
GTATTCCGCATGGGTGTCAA+CGG + chr2_3:47268104-47268123 Msa0295030:CDS 50.0%
GGTAACATTCTGCGTGACAC+TGG + chr2_3:47268657-47268676 Msa0295030:CDS 50.0%
GCATCATTAGCTGCACACCA+CGG + chr2_3:47268682-47268701 Msa0295030:CDS 50.0%
ACACCACGGATCAACATCCA+TGG + chr2_3:47268696-47268715 Msa0295030:CDS 50.0%
TGGTTTCAGGCGATTCTTGC+AGG + chr2_3:47268864-47268883 Msa0295030:intron 50.0%
TACTCGGGTAGCAGTTGTTG+AGG - chr2_3:47268919-47268938 None:intergenic 50.0%
! AACTGCTACCCGAGTATTGC+AGG + chr2_3:47268923-47268942 Msa0295030:CDS 50.0%
CCCCAACTCTAATGAGGTGT+AGG - chr2_3:47269160-47269179 None:intergenic 50.0%
CACTCAACCCCTGAACTGTT+TGG + chr2_3:47269294-47269313 Msa0295030:CDS 50.0%
CAGGACCATGGGAATTCCTT+AGG + chr2_3:47269994-47270013 Msa0295030:CDS 50.0%
AGCCGTCAAAGCCATTGCAG+CGG - chr2_3:47266797-47266816 None:intergenic 55.0%
CTGTGAGCTTGCGTCGCTTA+AGG - chr2_3:47267333-47267352 None:intergenic 55.0%
CTTAAGCGACGCAAGCTCAC+AGG + chr2_3:47267331-47267350 Msa0295030:CDS 55.0%
TAAGCAACGTTGCCTGGACG+AGG - chr2_3:47267634-47267653 None:intergenic 55.0%
!! GAGATCTCTTGGTGCTCCTG+CGG + chr2_3:47267885-47267904 Msa0295030:CDS 55.0%
! GCGATGCAGGGAGTTTTTCG+AGG + chr2_3:47267922-47267941 Msa0295030:CDS 55.0%
CAGCCATGGATGTTGATCCG+TGG - chr2_3:47268702-47268721 None:intergenic 55.0%
GTTGGCAGTGTCCCTTCTTG+CGG + chr2_3:47268747-47268766 Msa0295030:CDS 55.0%
AGCCAGACCATCCGCAAGAA+GGG - chr2_3:47268761-47268780 None:intergenic 55.0%
ATGCAGATGGGCGTGGTTCT+TGG + chr2_3:47269062-47269081 Msa0295030:intron 55.0%
CCTCATTAGAGTTGGGGTCC+CGG + chr2_3:47269163-47269182 Msa0295030:CDS 55.0%
!! GAGCCTTTGCTGGCTTCTTG+AGG + chr2_3:47269838-47269857 Msa0295030:CDS 55.0%
TGCAGGATTGGAACTGGGTC+AGG + chr2_3:47269975-47269994 Msa0295030:intron 55.0%
TTGGAACTGGGTCAGGACCA+TGG + chr2_3:47269982-47270001 Msa0295030:CDS 55.0%
TGGAACTGGGTCAGGACCAT+GGG + chr2_3:47269983-47270002 Msa0295030:CDS 55.0%
GCTAGCGCACTTAGCTCCTA+AGG - chr2_3:47270013-47270032 None:intergenic 55.0%
!! GCCCGCTGCAATGGCTTTGA+CGG + chr2_3:47266792-47266811 Msa0295030:CDS 60.0%
GCCGTCAAAGCCATTGCAGC+GGG - chr2_3:47266796-47266815 None:intergenic 60.0%
CCTACTGCAGCAAGCTCCAC+TGG - chr2_3:47267221-47267240 None:intergenic 60.0%
!! CCAGTGGAGCTTGCTGCAGT+AGG + chr2_3:47267218-47267237 Msa0295030:CDS 60.0%
CGACGCAAGCTCACAGGTAG+AGG + chr2_3:47267337-47267356 Msa0295030:CDS 60.0%
CTTGGAAGCTGCGACACCTC+CGG + chr2_3:47267370-47267389 Msa0295030:CDS 60.0%
AGGTATCCTTGGCCTCGTCC+AGG + chr2_3:47267619-47267638 Msa0295030:CDS 60.0%
CTGCACCGTTGACACCCATG+CGG - chr2_3:47268112-47268131 None:intergenic 60.0%
GCAGTGTCCCTTCTTGCGGA+TGG + chr2_3:47268751-47268770 Msa0295030:CDS 60.0%
GTCCCTTCTTGCGGATGGTC+TGG + chr2_3:47268756-47268775 Msa0295030:CDS 60.0%
CAGCCAGACCATCCGCAAGA+AGG - chr2_3:47268762-47268781 None:intergenic 60.0%
CCGGGACCCCAACTCTAATG+AGG - chr2_3:47269166-47269185 None:intergenic 60.0%
AGGAGCTAAGTGCGCTAGCC+TGG + chr2_3:47270014-47270033 Msa0295030:exon 60.0%
ACGTTGCCTGGACGAGGCCA+AGG - chr2_3:47267628-47267647 None:intergenic 65.0%
GCGGATGGTCTGGCTGTTGC+CGG + chr2_3:47268766-47268785 Msa0295030:CDS 65.0%
CGGATGGTCTGGCTGTTGCC+GGG + chr2_3:47268767-47268786 Msa0295030:CDS 65.0%
TGGTCTGGCTGTTGCCGGGC+AGG + chr2_3:47268771-47268790 Msa0295030:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 47265772 47270447 47265772 ID=Msa0295030;Name=Msa0295030
chr2_3 mRNA 47265772 47270447 47265772 ID=Msa0295030-mRNA-1;Parent=Msa0295030;Name=Msa0295030-mRNA-1;_AED=0.19;_eAED=0.19;_QI=245|1|1|1|0.92|0.85|14|425|507
chr2_3 exon 47265772 47265998 47265772 ID=Msa0295030-mRNA-1:exon:14748;Parent=Msa0295030-mRNA-1
chr2_3 exon 47266413 47266507 47266413 ID=Msa0295030-mRNA-1:exon:14749;Parent=Msa0295030-mRNA-1
chr2_3 exon 47266741 47266862 47266741 ID=Msa0295030-mRNA-1:exon:14750;Parent=Msa0295030-mRNA-1
chr2_3 exon 47267216 47267425 47267216 ID=Msa0295030-mRNA-1:exon:14751;Parent=Msa0295030-mRNA-1
chr2_3 exon 47267531 47267697 47267531 ID=Msa0295030-mRNA-1:exon:14752;Parent=Msa0295030-mRNA-1
chr2_3 exon 47267844 47267979 47267844 ID=Msa0295030-mRNA-1:exon:14753;Parent=Msa0295030-mRNA-1
chr2_3 exon 47268057 47268153 47268057 ID=Msa0295030-mRNA-1:exon:14754;Parent=Msa0295030-mRNA-1
chr2_3 exon 47268304 47268404 47268304 ID=Msa0295030-mRNA-1:exon:14755;Parent=Msa0295030-mRNA-1
chr2_3 exon 47268629 47268792 47268629 ID=Msa0295030-mRNA-1:exon:14756;Parent=Msa0295030-mRNA-1
chr2_3 exon 47268873 47268944 47268873 ID=Msa0295030-mRNA-1:exon:14757;Parent=Msa0295030-mRNA-1
chr2_3 exon 47269068 47269184 47269068 ID=Msa0295030-mRNA-1:exon:14758;Parent=Msa0295030-mRNA-1
chr2_3 exon 47269283 47269378 47269283 ID=Msa0295030-mRNA-1:exon:14759;Parent=Msa0295030-mRNA-1
chr2_3 exon 47269738 47269859 47269738 ID=Msa0295030-mRNA-1:exon:14760;Parent=Msa0295030-mRNA-1
chr2_3 exon 47269980 47270447 47269980 ID=Msa0295030-mRNA-1:exon:14761;Parent=Msa0295030-mRNA-1
chr2_3 five_prime_UTR 47265772 47265998 47265772 ID=Msa0295030-mRNA-1:five_prime_utr;Parent=Msa0295030-mRNA-1
chr2_3 five_prime_UTR 47266413 47266430 47266413 ID=Msa0295030-mRNA-1:five_prime_utr;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47266431 47266507 47266431 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47266741 47266862 47266741 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47267216 47267425 47267216 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47267531 47267697 47267531 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47267844 47267979 47267844 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47268057 47268153 47268057 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47268304 47268404 47268304 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47268629 47268792 47268629 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47268873 47268944 47268873 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47269068 47269184 47269068 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47269283 47269378 47269283 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47269738 47269859 47269738 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 CDS 47269980 47270022 47269980 ID=Msa0295030-mRNA-1:cds;Parent=Msa0295030-mRNA-1
chr2_3 three_prime_UTR 47270023 47270447 47270023 ID=Msa0295030-mRNA-1:three_prime_utr;Parent=Msa0295030-mRNA-1
Gene Sequence

>Msa0295030

ATGGCAGAGAAAGAGAGTTTGTTTTCTATAGGTGATTGGATGAGAATACCTATTTGCACTTTCTTCAAGGATGCTAGACTAGTATTTAAATTAGACGATCTTGGTCGCGAAATATTGTCAATTGCTTTGCCCGCTGCAATGGCTTTGACGGCTGATCCTATAGCATCATTGGTCGATACGGCCTTCATTGGCCAATTAGGTCCAGTGGAGCTTGCTGCAGTAGGAGTTTCCATAGCTCTATTCAATCAAGCATCAAGGATCTTTATATTCCCACTAGTCAGTGTCACAACTTCTTTTGTGGCTGAGGAAGATGCCTTAAGCGACGCAAGCTCACAGGTAGAGGAGAATGGATGCTTGGAAGCTGCGACACCTCCGGATGCTGAAACCAAAGAGTTCTTACCGCAGAAAAATTCGGTAGTTGAAAGCTTTAATGTAGTTAAGGTTGATGGAAGTAAGAGAAGGCAAATTCCTTCAGCTTCGTCAGCGCTATATTTTGGAGGTATCCTTGGCCTCGTCCAGGCAACGTTGCTTATTTCTGCAGCAAAACCTTTATTGAACTTCATGGGAGTGACTTCTGATTCTCCTATGCTACATCCTGCAATGCAGTACTTGAAATTGAGATCTCTTGGTGCTCCTGCGGTTCTTCTTTCATTAGCGATGCAGGGAGTTTTTCGAGGATTTAAAGACACTAAAACTCCTTTATATGCCACTGTGGCAGGAGATTTGACGAATATAGCACTAGATCCGCTTTTCATTTTTGTATTCCGCATGGGTGTCAACGGTGCAGCCATTGCACATGTTATATCTCAGTATCTACTTTCAGCTATACTCCTGTGGAGTTTGAACAAACAAGTTGATCTTATACCTCCAAGCATCAAACATCTGCAATTCGATCGATTTGCCAAAAATGGTTTTCTATTATTCATGAGAGTCATTGCGGTAACATTCTGCGTGACACTGGCTGCATCATTAGCTGCACACCACGGATCAACATCCATGGCTGCATTTCAAGTCTGTCTGCAAGTTTGGTTGGCAGTGTCCCTTCTTGCGGATGGTCTGGCTGTTGCCGGGCAGGCGATTCTTGCAGGTGCATTTGCTAACAAGGACTATGAAAAGGCCTCAACAACTGCTACCCGAGTATTGCAGATGGGCGTGGTTCTTGGATTCGCACTTGCATTCATTCTTGGAACAGGATTGCACTTTGGAGCTAAACTATTTACAAAAGATGATGATGTCCTACACCTCATTAGAGTTGGGGTCCCGTTTGTAGCACTCACTCAACCCCTGAACTGTTTGGCCTTTGTATTTGATGGTGTCAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCCATGGTTATAGTGGCAATTATTAGCATAATTTGTCTACTTATTTTGTCATCTGCTGGTGGATTCATTGGAATTTGGGTTGCATTGACAATCTATATGAGTTTAAGAGCCTTTGCTGGCTTCTTGAGGATTGGAACTGGGTCAGGACCATGGGAATTCCTTAGGAGCTAA
Protein sequence

>Msa0295030

MAEKESLFSIGDWMRIPICTFFKDARLVFKLDDLGREILSIALPAAMALTADPIASLVDTAFIGQLGPVELAAVGVSIALFNQASRIFIFPLVSVTTSFVAEEDALSDASSQVEENGCLEAATPPDAETKEFLPQKNSVVESFNVVKVDGSKRRQIPSASSALYFGGILGLVQATLLISAAKPLLNFMGVTSDSPMLHPAMQYLKLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATVAGDLTNIALDPLFIFVFRMGVNGAAIAHVISQYLLSAILLWSLNKQVDLIPPSIKHLQFDRFAKNGFLLFMRVIAVTFCVTLAASLAAHHGSTSMAAFQVCLQVWLAVSLLADGLAVAGQAILAGAFANKDYEKASTTATRVLQMGVVLGFALAFILGTGLHFGAKLFTKDDDVLHLIRVGVPFVALTQPLNCLAFVFDGVNFGASDFAYSAFSMVIVAIISIICLLILSSAGGFIGIWVALTIYMSLRAFAGFLRIGTGSGPWEFLRS*