AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0011920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011920 MtrunA17_Chr1g0160491 81.041 269 16 3 23 291 55 288 7.81e-145 432
Msa0011920 MtrunA17_Chr3g0119141 67.073 164 32 1 106 269 24 165 3.05e-67 207
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0011920 AT2G01440.1 28.261 276 147 10 23 291 12 243 1.13e-14 75.1

Find 256 sgRNAs with CRISPR-Local

Find 1634 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCTGTTTCAGAAATTATT+TGG 0.134771 1_1:-17973334 Msa0011920:three_prime_UTR
GGCCCCTGAGTTGGTGTAAT+TGG 0.159367 1_1:+17962956 None:intergenic
ACTTGTTCGCAATACTATTT+AGG 0.171715 1_1:+17979066 None:intergenic
TGCTCTGAAAGTTCGATAAT+TGG 0.181246 1_1:+17963216 None:intergenic
CTTGCATGCATTGAAGTTAT+TGG 0.181327 1_1:-17972748 Msa0011920:three_prime_UTR
CTTGCAGGTATTTGCTCTTA+TGG 0.204641 1_1:-17980838 Msa0011920:intron
ACCCTTGCACTTGCTTTATA+TGG 0.221439 1_1:-17965764 Msa0011920:three_prime_UTR
GCCACTCAAGTAATTGAAAT+TGG 0.233843 1_1:-17963039 Msa0011920:three_prime_UTR
GACATTGATTGAGGTGTTAA+AGG 0.244357 1_1:+17980477 None:intergenic
TAAATGTTGTTTAAAATCTT+TGG 0.247622 1_1:+17980620 None:intergenic
AATTCCTCTCTAATGTCTTT+AGG 0.250188 1_1:+17975149 None:intergenic
CATAACATCCCTGATCTAAT+TGG 0.250534 1_1:-17980813 Msa0011920:CDS
AAATTATTTGGGATTTAAAA+AGG 0.251974 1_1:-17973322 Msa0011920:three_prime_UTR
AAAGACATTAGAGAGGAATT+TGG 0.258509 1_1:-17975146 Msa0011920:three_prime_UTR
GAATACATGTAGTAGTTCTT+TGG 0.280156 1_1:-17980249 Msa0011920:exon
TCTCTAATGTCTTTAGGAAT+TGG 0.285234 1_1:+17975155 None:intergenic
TGGGTTTCATCTTGCTAATA+TGG 0.287027 1_1:-17962839 Msa0011920:three_prime_UTR
GCAATTTCCTGCACTTAAAC+TGG 0.298836 1_1:-17961978 Msa0011920:three_prime_UTR
CTCAAAGACTGATGATTATA+TGG 0.304409 1_1:-17965828 Msa0011920:three_prime_UTR
TGCAGACAGCGTTGAATTCT+CGG 0.309005 1_1:-17967240 Msa0011920:three_prime_UTR
TCGACTTCCAATCTGGTAAT+AGG 0.310055 1_1:+17962751 None:intergenic
AAGAAACGTTAGGGAAGTTT+AGG 0.311725 1_1:-17963086 Msa0011920:three_prime_UTR
GTTATCTCAGACCGGTTTCC+AGG 0.312908 1_1:-17963156 Msa0011920:three_prime_UTR
TACCAAGACCTTCGAGCATT+TGG 0.317152 1_1:+17973492 None:intergenic
GGTCTATTTCAACAACCTTC+TGG 0.326080 1_1:+17981956 None:intergenic
TAAATCTTCAATTTCGAGTC+TGG 0.326921 1_1:-17965873 Msa0011920:three_prime_UTR
TCCAATGAATCGGCTACTTC+AGG 0.327507 1_1:-17973294 Msa0011920:intron
CTGTCTCACCAAGAAGGTTT+TGG 0.334829 1_1:-17973393 Msa0011920:three_prime_UTR
TTCTGAAACAAATATCATTT+CGG 0.340676 1_1:-17980646 Msa0011920:CDS
GATATTTCCATCAATTACTT+TGG 0.341300 1_1:-17980712 Msa0011920:CDS
AGTTATTGGCTCTGGCTATC+AGG 0.341562 1_1:-17972734 Msa0011920:intron
TTTGAAGGGTAGATACAATA+TGG 0.347129 1_1:+17976312 None:intergenic
AAGGAGCTCCAAAACCTTCT+TGG 0.359567 1_1:+17973385 None:intergenic
GCTTGCGTTGCTTGAAAACT+TGG 0.369982 1_1:-17967488 Msa0011920:three_prime_UTR
ATCAAATATAAGTCTCTTGC+GGG 0.371310 1_1:+17974224 None:intergenic
TAGTTTGACAGGCTCTTCTT+TGG 0.382831 1_1:-17961846 Msa0011920:three_prime_UTR
TTGGAGAAGTCTTATCTTCA+AGG 0.382863 1_1:-17980078 Msa0011920:intron
TAGCATATGATCGTGGAAAA+TGG 0.383067 1_1:+17980152 None:intergenic
GGTGAAGATGTTAAACTAGA+AGG 0.386289 1_1:+17980528 None:intergenic
CTTCCATTTCCAATTAGATC+AGG 0.386903 1_1:+17980804 None:intergenic
AATATTGACGTTCTTGAAGA+TGG 0.388935 1_1:-17976366 Msa0011920:three_prime_UTR
TGACCGGAAGTAAGAGTATA+GGG 0.389140 1_1:+17973362 None:intergenic
GGATATTAGTGAAGCTGATC+TGG 0.391300 1_1:-17974247 Msa0011920:three_prime_UTR
CGATTGAAATTTCTCCGGTC+TGG 0.391448 1_1:+17967285 None:intergenic
ATCCCTGATCTAATTGGAAA+TGG 0.392081 1_1:-17980807 Msa0011920:CDS
TAACTATTAGGCGGCTTTCA+TGG 0.392532 1_1:-17967551 Msa0011920:intron
GTTTGAACCCAACATTCCTT+CGG 0.393103 1_1:-17976284 Msa0011920:three_prime_UTR
CGAGTTTCCTATTACCAGAT+TGG 0.393606 1_1:-17962758 Msa0011920:three_prime_UTR
AGCTGTTTCAGAAATTATTT+GGG 0.398821 1_1:-17973333 Msa0011920:three_prime_UTR
GCCCCTGAGTTGGTGTAATT+GGG 0.399144 1_1:+17962957 None:intergenic
AAAGCAAGTGCAAGGGTCCT+TGG 0.400244 1_1:+17965770 None:intergenic
TCAGCTTCACTAATATCCTT+TGG 0.401300 1_1:+17974252 None:intergenic
CAAGCAAGTGTTTATAATGC+TGG 0.403142 1_1:+17967506 None:intergenic
GAGATAACTCATTAAGTGTA+AGG 0.403540 1_1:+17980376 None:intergenic
GGAGAAATTTCAATCGTCAT+TGG 0.404798 1_1:-17967278 Msa0011920:three_prime_UTR
CATATAATCATCAGTCTTTG+AGG 0.409324 1_1:+17965829 None:intergenic
GTTTGAACAGGAATCCTTCC+TGG 0.409760 1_1:+17964081 None:intergenic
ACCTGAAGTAGCCGATTCAT+TGG 0.412932 1_1:+17973293 None:intergenic
TTTGAACCCAACATTCCTTC+GGG 0.416108 1_1:-17976283 Msa0011920:three_prime_UTR
ATATAAAATTGTCACCTTGT+AGG 0.418463 1_1:+17964020 None:intergenic
CCTTCATCGTTTGAAAGTAC+TGG 0.419728 1_1:-17962875 Msa0011920:three_prime_UTR
TGCATTGAAGTTATTGGCTC+TGG 0.419747 1_1:-17972742 Msa0011920:three_prime_UTR
ATCAATGTCTTCAATATATG+AGG 0.420240 1_1:-17980463 Msa0011920:CDS
GTAGTCATGAATTAGCCTTT+AGG 0.421104 1_1:-17961819 Msa0011920:three_prime_UTR
TTGAATAACCAGTCTTTCCT+TGG 0.423676 1_1:+17982731 None:intergenic
CAGGAAATTGCTCCAGATCA+TGG 0.427300 1_1:+17961990 None:intergenic
CACCAGGTCCACGTAATAAT+AGG 0.429367 1_1:+17962815 None:intergenic
CTTAAGTGCTTCCCATGATC+TGG 0.430962 1_1:-17962002 Msa0011920:three_prime_UTR
CGTTGCTTCTTAGTTAATCC+AGG 0.431264 1_1:+17980330 None:intergenic
ATATTTCCATCAATTACTTT+GGG 0.431693 1_1:-17980711 Msa0011920:CDS
TTCCAAATGCTCGAAGGTCT+TGG 0.432542 1_1:-17973494 Msa0011920:three_prime_UTR
CATGCTCAATATCCGATTCC+CGG 0.435529 1_1:+17979174 None:intergenic
ACATCTGTCAATTGCTTACC+TGG 0.436492 1_1:-17980348 Msa0011920:CDS
CTCAAGTGGGTTTGTATGAT+GGG 0.437453 1_1:-17980680 Msa0011920:CDS
TGTAATGTAAATAGTTTGAC+AGG 0.439782 1_1:-17961857 Msa0011920:three_prime_UTR
AAAGACTGAAGAATCACTTC+AGG 0.440610 1_1:+17982796 None:intergenic
GGGCAGTATTTGATGTTTGT+TGG 0.441166 1_1:-17980097 Msa0011920:three_prime_UTR
TATTGTATCTACCCTTCAAA+AGG 0.443035 1_1:-17976309 Msa0011920:three_prime_UTR
TGATGGATGAGTTGGAAGAT+GGG 0.443050 1_1:-17963260 Msa0011920:three_prime_UTR
CCTCAAGTGGGTTTGTATGA+TGG 0.443194 1_1:-17980681 Msa0011920:CDS
AGCATGTAACCGACAAAGTT+GGG 0.443905 1_1:-17979157 Msa0011920:three_prime_UTR
ACAACCATCATCGATGCATC+TGG 0.444936 1_1:+17963006 None:intergenic
CGATTCTTTACGTGTAGTTA+CGG 0.445185 1_1:-17980186 Msa0011920:three_prime_UTR
ATCTCGTAGTGATCTTTAGT+AGG 0.446993 1_1:+17976399 None:intergenic
GCTCTGAAAGTTCGATAATT+GGG 0.448698 1_1:+17963217 None:intergenic
AGACAGCCGCTTTGCCTGCT+AGG 0.450136 1_1:-17961944 Msa0011920:three_prime_UTR
CTTCCCTATACTCTTACTTC+CGG 0.450519 1_1:-17973365 Msa0011920:three_prime_UTR
CTGTAAATTTATGCTTCATC+CGG 0.455705 1_1:+17981980 None:intergenic
TACAATTGTGGTTTATTACA+TGG 0.458064 1_1:-17963132 Msa0011920:three_prime_UTR
AATTATCACTAGCGCGAAAA+CGG 0.459791 1_1:-17982644 Msa0011920:intron
CACAATTGTATCCTGGAAAC+CGG 0.460527 1_1:+17963145 None:intergenic
TTGCTTGGCAAGAAACAATC+TGG 0.461165 1_1:-17962790 Msa0011920:three_prime_UTR
ATGATGGATGAGTTGGAAGA+TGG 0.462197 1_1:-17963261 Msa0011920:three_prime_UTR
GCACTACCCAAAGTAATTGA+TGG 0.462197 1_1:+17980705 None:intergenic
GTCCAACTCGGCCCCTGAGT+TGG 0.463318 1_1:+17962947 None:intergenic
CAAAACCTTCTTGGTGAGAC+AGG 0.464022 1_1:+17973394 None:intergenic
AAGCAAGTGCAAGGGTCCTT+GGG 0.468900 1_1:+17965771 None:intergenic
AAGAGGAAGATTTAACAGTA+AGG 0.469294 1_1:-17967168 Msa0011920:intron
TTGACCGGAAGTAAGAGTAT+AGG 0.470071 1_1:+17973361 None:intergenic
TCGATGGTATATGTTTGAAC+AGG 0.470456 1_1:+17964069 None:intergenic
TGATGTCCCGAAGGAATGTT+GGG 0.475017 1_1:+17976277 None:intergenic
CGTAACTACACGTAAAGAAT+CGG 0.475916 1_1:+17980187 None:intergenic
TCAGATTGCAGACCGGGAAT+CGG 0.476393 1_1:-17979186 Msa0011920:three_prime_UTR
ATTGCCGTCGACTTCCAATC+TGG 0.478317 1_1:+17962744 None:intergenic
AAATGAAATCTAAAATGAAT+CGG 0.481089 1_1:-17980776 Msa0011920:CDS
ATTGTATCTACCCTTCAAAA+GGG 0.481958 1_1:-17976308 Msa0011920:three_prime_UTR
CCAACTGTTGCTTTACTCAC+TGG 0.482345 1_1:-17967448 Msa0011920:three_prime_UTR
CGTGGACCTGGTGACTTGCT+TGG 0.483435 1_1:-17962805 Msa0011920:three_prime_UTR
TGGCCTCTCTTTAGCGCAAA+GGG 0.484083 1_1:+17976332 None:intergenic
TCTTGGTACACAAGTAGAAA+AGG 0.485150 1_1:-17973477 Msa0011920:three_prime_UTR
CAATCTGGTAATAGGAAACT+CGG 0.485660 1_1:+17962759 None:intergenic
CAGTGCTCTTTACACCATGC+TGG 0.486632 1_1:+17981935 None:intergenic
ACCAATTTCAATTACTTGAG+TGG 0.489380 1_1:+17963038 None:intergenic
TCCTTTGTCACTTCCCTCGA+TGG 0.489814 1_1:+17964053 None:intergenic
GGAATTGGATCAACAATGAC+TGG 0.492228 1_1:+17975170 None:intergenic
TGGTTGTCAGATTGCAGACC+GGG 0.492299 1_1:-17979192 Msa0011920:three_prime_UTR
CGCTGTCTGCAAACAAACTG+TGG 0.492730 1_1:+17967252 None:intergenic
AAAGGCCGGTTCCAATGAAT+CGG 0.493622 1_1:-17973304 Msa0011920:three_prime_UTR
CACTGTAAAGTTGCGTAAGA+AGG 0.494160 1_1:-17981917 Msa0011920:intron
TGAAACAGCTTGCAGTTGAC+CGG 0.494944 1_1:+17973346 None:intergenic
GGGAAGTGACAAAGGATTTG+AGG 0.495742 1_1:-17964046 Msa0011920:three_prime_UTR
AGTAGCCGATTCATTGGAAC+CGG 0.496130 1_1:+17973299 None:intergenic
TCATTACTTGAGGTGATTGT+TGG 0.496922 1_1:-17979212 Msa0011920:three_prime_UTR
TTTCATGGTTCCAACTGAGT+TGG 0.497308 1_1:-17967536 Msa0011920:three_prime_UTR
GTGATGAATTCTGAGAGGTT+TGG 0.497651 1_1:-17962985 Msa0011920:three_prime_UTR
GAGCATGTAACCGACAAAGT+TGG 0.500156 1_1:-17979158 Msa0011920:three_prime_UTR
TATATTGAAGACATTGATTG+AGG 0.503798 1_1:+17980468 None:intergenic
ATACTCTTCCAAGGAAAGAC+TGG 0.504338 1_1:-17982739 Msa0011920:CDS
GCACACGGGGACATTTATGA+TGG 0.504771 1_1:-17980118 Msa0011920:three_prime_UTR
TTGTTCAATTTCATTACTTG+AGG 0.510057 1_1:-17979222 Msa0011920:three_prime_UTR
AGACGCACATGTTGCTGCAC+TGG 0.511644 1_1:-17962713 Msa0011920:intron
TGACACTTTCAGGGTGATGT+TGG 0.512220 1_1:-17972796 Msa0011920:intron
AATGACGATTGAAATTTCTC+CGG 0.513924 1_1:+17967280 None:intergenic
TTTGGGTAGTGCTCCTCAAG+TGG 0.515223 1_1:-17980694 Msa0011920:CDS
CCAGATGATGATGGATGAGT+TGG 0.516635 1_1:-17963268 Msa0011920:intron
CACCAACTCAGGGGCCGAGT+TGG 0.517789 1_1:-17962949 Msa0011920:three_prime_UTR
CCTGCACTTAAACTGGAGCT+TGG 0.519333 1_1:-17961971 Msa0011920:three_prime_UTR
ACTACTACATGTATTCCAAA+AGG 0.521249 1_1:+17980256 None:intergenic
AAGTGCAAGGGTCCTTGGGA+TGG 0.523030 1_1:+17965775 None:intergenic
AATAAACCACAATTGTATCC+TGG 0.525067 1_1:+17963138 None:intergenic
GCCTTGTTCCGCGTCCAACT+CGG 0.525727 1_1:+17962935 None:intergenic
GGAAGATTCTCAAAAGAAAG+TGG 0.525817 1_1:-17980418 Msa0011920:CDS
TGGCCCAATTACACCAACTC+AGG 0.527566 1_1:-17962960 Msa0011920:three_prime_UTR
CGCTTTGGTGTGATTCAAAG+AGG 0.530319 1_1:-17967185 Msa0011920:three_prime_UTR
ACTTATAAACATCAGCCTAA+AGG 0.533109 1_1:+17961804 None:intergenic
CACCATATAAAGCAAGTGCA+AGG 0.534499 1_1:+17965762 None:intergenic
TTGGGTAGTGCTCCTCAAGT+GGG 0.534669 1_1:-17980693 Msa0011920:CDS
TTCTTGCCAAGCAAGTCACC+AGG 0.535464 1_1:+17962799 None:intergenic
AACTGTGGGTTTCACACGGT+GGG 0.537750 1_1:-17980294 Msa0011920:CDS
AAAATTGGATCAAGTTACTA+GGG 0.539797 1_1:-17980439 Msa0011920:CDS
AGTGCAAGGGTCCTTGGGAT+GGG 0.539907 1_1:+17965776 None:intergenic
ACAATTGTGGTTTATTACAT+GGG 0.540012 1_1:-17963131 Msa0011920:three_prime_UTR
TGGAAATATCCTACACATCA+AGG 0.540440 1_1:+17980725 None:intergenic
CAGATAACCGACTTACCACC+AGG 0.541332 1_1:-17964099 Msa0011920:three_prime_UTR
AGGAAATTGCTCCAGATCAT+GGG 0.542959 1_1:+17961991 None:intergenic
ACCCTTTCTGCACTAAAATG+AGG 0.543447 1_1:-17982708 Msa0011920:CDS
AGGATTTGAGGATGCCTACA+AGG 0.545223 1_1:-17964034 Msa0011920:intron
CTCGGCCTTACGTATTGCTG+TGG 0.546224 1_1:-17967222 Msa0011920:three_prime_UTR
GACTTGATCAATCACCTAGC+AGG 0.546791 1_1:+17961930 None:intergenic
TTCCATTTCCAATTAGATCA+GGG 0.547110 1_1:+17980805 None:intergenic
GTGGATGAGCAGCATCGCTT+TGG 0.547311 1_1:-17967200 Msa0011920:three_prime_UTR
TTTCAGGGTGATGTTGGATG+TGG 0.549338 1_1:-17972790 Msa0011920:intron
ATCTCAAAGTTATCTCAGAC+CGG 0.549467 1_1:-17963164 Msa0011920:three_prime_UTR
CGGTTTCCAGGATACAATTG+TGG 0.550814 1_1:-17963144 Msa0011920:three_prime_UTR
GAAGATTCTCAAAAGAAAGT+GGG 0.551057 1_1:-17980417 Msa0011920:CDS
CAAAATTATCGCAATGAACA+AGG 0.551136 1_1:+17961878 None:intergenic
CTCAGGGGCCGAGTTGGACG+CGG 0.553537 1_1:-17962943 Msa0011920:three_prime_UTR
ATGATGTCCCGAAGGAATGT+TGG 0.554639 1_1:+17976276 None:intergenic
CCAAGCTCCAGTTTAAGTGC+AGG 0.555098 1_1:+17961971 None:intergenic
ATGTTGCAGGGTATCCAGAC+CGG 0.555872 1_1:-17967299 Msa0011920:intron
TGTTCCAGATGCATCGATGA+TGG 0.557877 1_1:-17963010 Msa0011920:three_prime_UTR
CATCAAATATAAGTCTCTTG+CGG 0.558668 1_1:+17974223 None:intergenic
GGCCTTACGTATTGCTGTGG+TGG 0.559193 1_1:-17967219 Msa0011920:three_prime_UTR
GTTTATAAGTTGATCGAACA+AGG 0.562817 1_1:-17961791 Msa0011920:three_prime_UTR
ACGTTAGGGAAGTTTAGGAC+TGG 0.563325 1_1:-17963081 Msa0011920:three_prime_UTR
CCAGTACTTTCAAACGATGA+AGG 0.564004 1_1:+17962875 None:intergenic
GCCGAGTTGGACGCGGAACA+AGG 0.565761 1_1:-17962936 Msa0011920:three_prime_UTR
TTGGTTGTCAGATTGCAGAC+CGG 0.566943 1_1:-17979193 Msa0011920:three_prime_UTR
GGTACACAAGTAGAAAAGGA+TGG 0.572043 1_1:-17973473 Msa0011920:three_prime_UTR
CGTAAAGAATCGGATTAATG+TGG 0.572302 1_1:+17980197 None:intergenic
GATGGATGAGTTGGAAGATG+GGG 0.572787 1_1:-17963259 Msa0011920:three_prime_UTR
TGTATCTACCCTTCAAAAGG+GGG 0.574846 1_1:-17976306 Msa0011920:three_prime_UTR
TATCCCTTTGCGCTAAAGAG+AGG 0.577247 1_1:-17976335 Msa0011920:three_prime_UTR
ATGGCCTCTCTTTAGCGCAA+AGG 0.577278 1_1:+17976331 None:intergenic
ACGACATCTCCTTGATGTGT+AGG 0.579277 1_1:-17980734 Msa0011920:CDS
GCATAAATTTACAGACCAGA+AGG 0.582627 1_1:-17981971 Msa0011920:CDS
TACTGGAGCAATCATCAGAT+GGG 0.589389 1_1:-17962858 Msa0011920:three_prime_UTR
TGGATCAACAATGACTGGCA+AGG 0.594831 1_1:+17975175 None:intergenic
ATCTTCAATTTCGAGTCTGG+AGG 0.595795 1_1:-17965870 Msa0011920:three_prime_UTR
GCAGACATGGCAAGAACATG+TGG 0.598690 1_1:+17965803 None:intergenic
ATGGTCCTGTCTCACCAAGA+AGG 0.599941 1_1:-17973399 Msa0011920:three_prime_UTR
TCCTTCGGGACATCATTGCA+AGG 0.600821 1_1:-17976269 Msa0011920:intron
GATTGAGGTGTTAAAGGACA+AGG 0.601011 1_1:+17980483 None:intergenic
GAAGGATTGACATACAAAGA+AGG 0.601579 1_1:+17980546 None:intergenic
TTGTATCTACCCTTCAAAAG+GGG 0.603929 1_1:-17976307 Msa0011920:three_prime_UTR
GGCCCAATTACACCAACTCA+GGG 0.604595 1_1:-17962959 Msa0011920:three_prime_UTR
GTACACAAGTAGAAAAGGAT+GGG 0.605428 1_1:-17973472 Msa0011920:three_prime_UTR
ACACTGTGTGTACAAAGGAA+TGG 0.606966 1_1:-17973418 Msa0011920:three_prime_UTR
GTACTGGAGCAATCATCAGA+TGG 0.606977 1_1:-17962859 Msa0011920:three_prime_UTR
TAAAAGTAAAACGTGTGCCA+CGG 0.607986 1_1:+17979096 None:intergenic
ACAAGCGCGGATTATTCGCA+AGG 0.610496 1_1:-17967410 Msa0011920:intron
CGGAAGTAAGAGTATAGGGA+AGG 0.611652 1_1:+17973366 None:intergenic
GTTCAAACATATACCATCGA+GGG 0.613078 1_1:-17964066 Msa0011920:three_prime_UTR
ATCCACCACAGCAATACGTA+AGG 0.613184 1_1:+17967217 None:intergenic
ACCATCGAGGGAAGTGACAA+AGG 0.613822 1_1:-17964054 Msa0011920:three_prime_UTR
CCAGTGAGTAAAGCAACAGT+TGG 0.614716 1_1:+17967448 None:intergenic
TGGATTGCAACCAACTCAGT+TGG 0.614757 1_1:+17967526 None:intergenic
AATCTGGTAATAGGAAACTC+GGG 0.616903 1_1:+17962760 None:intergenic
AATCCTTCCTGGTGGTAAGT+CGG 0.617389 1_1:+17964092 None:intergenic
ACCATATAAAGCAAGTGCAA+GGG 0.617593 1_1:+17965763 None:intergenic
ATGGATGAGTTGGAAGATGG+GGG 0.618804 1_1:-17963258 Msa0011920:three_prime_UTR
GTTGCTTGAAAACTTGGACG+AGG 0.619505 1_1:-17967482 Msa0011920:three_prime_UTR
GCTGTCTGCAAACAAACTGT+GGG 0.622441 1_1:+17967253 None:intergenic
AGAACTGTTATACTCTTCCA+AGG 0.623568 1_1:-17982748 Msa0011920:CDS
CGATTCTTCAGAGGTAAGAG+AGG 0.624675 1_1:-17980595 Msa0011920:CDS
TGGGATGGGAGTAGCAGACA+TGG 0.625483 1_1:+17965790 None:intergenic
CCATCATACAAACCCACTTG+AGG 0.625602 1_1:+17980681 None:intergenic
TTCAGGGTGATGTTGGATGT+GGG 0.626703 1_1:-17972789 Msa0011920:intron
ACCTTGCAATGATGTCCCGA+AGG 0.628557 1_1:+17976268 None:intergenic
TGGTGATATGTCACTGACAC+AGG 0.629735 1_1:-17965744 Msa0011920:intron
GACCTATTATTACGTGGACC+TGG 0.631359 1_1:-17962817 Msa0011920:three_prime_UTR
GAATTCTGAGAGGTTTGGAA+TGG 0.632033 1_1:-17962980 Msa0011920:three_prime_UTR
TTTCAAACGATGAAGGCCAC+TGG 0.635677 1_1:+17962882 None:intergenic
ACATTTATACGATTCTTCAG+AGG 0.636619 1_1:-17980604 Msa0011920:CDS
CTAATCTACAGAATGCACAC+GGG 0.637931 1_1:-17980132 Msa0011920:three_prime_UTR
GCAGAAGCAGCACGAAGCTG+AGG 0.639554 1_1:+17963189 None:intergenic
AAATAACACTGTGTGTACAA+AGG 0.641684 1_1:-17973423 Msa0011920:three_prime_UTR
ATTACCAGATTGGAAGTCGA+CGG 0.641804 1_1:-17962748 Msa0011920:three_prime_UTR
CACACGGGGACATTTATGAT+GGG 0.644132 1_1:-17980117 Msa0011920:three_prime_UTR
ATTTGTTTCAGAATATGTTG+TGG 0.648943 1_1:+17980656 None:intergenic
CAATTATTCCAAATGCTCGA+AGG 0.649656 1_1:-17973500 Msa0011920:three_prime_UTR
AGATAACTGTGGGTTTCACA+CGG 0.649674 1_1:-17980298 Msa0011920:CDS
TTAATATCATCAACTGCCAG+TGG 0.651291 1_1:-17962898 Msa0011920:three_prime_UTR
GTGAGCAACTAGATAACTGT+GGG 0.657830 1_1:-17980308 Msa0011920:CDS
AGAAGGTGATGCTTCAGAGA+CGG 0.667800 1_1:+17980563 None:intergenic
TGTCTGCTACTCCCATCCCA+AGG 0.667833 1_1:-17965787 Msa0011920:three_prime_UTR
GCTAATCTACAGAATGCACA+CGG 0.668201 1_1:-17980133 Msa0011920:three_prime_UTR
CATAGCATGTGTGAGTGGCA+AGG 0.670366 1_1:-17979030 Msa0011920:intron
CGTGAGCAACTAGATAACTG+TGG 0.671660 1_1:-17980309 Msa0011920:CDS
AAGATTCTCAAAAGAAAGTG+GGG 0.672414 1_1:-17980416 Msa0011920:CDS
TAACCGACTTACCACCAGGA+AGG 0.674759 1_1:-17964095 Msa0011920:three_prime_UTR
AATATGGACCTATTATTACG+TGG 0.675630 1_1:-17962823 Msa0011920:three_prime_UTR
TGTAGATTAGCATATGATCG+TGG 0.678884 1_1:+17980145 None:intergenic
AATTCCTAAAGACATTAGAG+AGG 0.682353 1_1:-17975153 Msa0011920:three_prime_UTR
AGAGACATAGCATGTGTGAG+TGG 0.682414 1_1:-17979035 Msa0011920:three_prime_UTR
CAATCACCTAGCAGGCAAAG+CGG 0.695432 1_1:+17961938 None:intergenic
GTTGTTGAAATAGACCAGCA+TGG 0.696927 1_1:-17981949 Msa0011920:CDS
TGAACAGGAATCCTTCCTGG+TGG 0.697461 1_1:+17964084 None:intergenic
CAACCCCACTAAAACAAGCG+CGG 0.702736 1_1:-17967423 Msa0011920:three_prime_UTR
ACTACATGTATTCCAAAAGG+CGG 0.712337 1_1:+17980259 None:intergenic
TGATTGATCAAGTCTTGATG+TGG 0.713708 1_1:-17961921 Msa0011920:three_prime_UTR
TAACTGTGGGTTTCACACGG+TGG 0.714444 1_1:-17980295 Msa0011920:CDS
TGTTCAAACATATACCATCG+AGG 0.717968 1_1:-17964067 Msa0011920:three_prime_UTR
TAATCTACAGAATGCACACG+GGG 0.721253 1_1:-17980131 Msa0011920:three_prime_UTR
TGGTTGTGATGAATTCTGAG+AGG 0.736566 1_1:-17962990 Msa0011920:three_prime_UTR
GCCCAATTACACCAACTCAG+GGG 0.737840 1_1:-17962958 Msa0011920:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATTAT+GGG + chr1_1:17969846-17969865 None:intergenic 0.0%
!! ATATATATATATATATATTA+TGG + chr1_1:17969847-17969866 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTATATTT+TGG - chr1_1:17969875-17969894 Msa0011920:intron 0.0%
!!! AACTTTTTTTTTAAAAAACT+TGG + chr1_1:17962214-17962233 None:intergenic 10.0%
!!! TATATAATGATTTTCTATAT+TGG + chr1_1:17967480-17967499 None:intergenic 10.0%
!!! TTTTTATAATAAGATTCATT+AGG - chr1_1:17967623-17967642 Msa0011920:intron 10.0%
!!! TTTTATTTATAATACTATGT+GGG + chr1_1:17967675-17967694 None:intergenic 10.0%
!! ATTAACATAATTTCTTATTA+GGG + chr1_1:17967865-17967884 None:intergenic 10.0%
!! ACAAATTAAAAAGAAAATAT+GGG + chr1_1:17969137-17969156 None:intergenic 10.0%
!! TACAAATTAAAAAGAAAATA+TGG + chr1_1:17969138-17969157 None:intergenic 10.0%
!!! TTTTTATTTTATTTTTGTTG+AGG - chr1_1:17969584-17969603 Msa0011920:intron 10.0%
!! AAAATTATAAGAATTTCATA+GGG + chr1_1:17977190-17977209 None:intergenic 10.0%
!! TAAAATTATAAGAATTTCAT+AGG + chr1_1:17977191-17977210 None:intergenic 10.0%
!!! ATTTTAATATAGTTACATTA+TGG - chr1_1:17977399-17977418 Msa0011920:intron 10.0%
!! TGGTTTAATTATTTATTATA+AGG + chr1_1:17980111-17980130 None:intergenic 10.0%
!!! TAATTAATGACTTTTTTATT+TGG + chr1_1:17980142-17980161 None:intergenic 10.0%
!!! TGGTTTTTATTATTTATTTA+AGG + chr1_1:17980177-17980196 None:intergenic 10.0%
!!! GGATTTTTTTTATTTTTTTT+GGG + chr1_1:17981946-17981965 None:intergenic 10.0%
!!! AGGATTTTTTTTATTTTTTT+TGG + chr1_1:17981947-17981966 None:intergenic 10.0%
!!! CAAAATCTTTTCAAAATAAA+AGG + chr1_1:17962258-17962277 None:intergenic 15.0%
!! ATTACTTACAATATTACAAT+AGG + chr1_1:17962303-17962322 None:intergenic 15.0%
!! TTGTAAGTAATATTGTAAAA+AGG - chr1_1:17962312-17962331 Msa0011920:intron 15.0%
!! TATATTTCAAAGTTGTAAAT+AGG - chr1_1:17962751-17962770 Msa0011920:three_prime_UTR 15.0%
!!! AAATGAAATCTAAAATGAAT+CGG - chr1_1:17963745-17963764 Msa0011920:intron 15.0%
!!! TAAATGTTGTTTAAAATCTT+TGG + chr1_1:17963904-17963923 None:intergenic 15.0%
!! TATTTAAAGATATTAGCAAA+AGG + chr1_1:17965218-17965237 None:intergenic 15.0%
!!! CCTTGATATTTTTATTATTT+GGG - chr1_1:17965758-17965777 Msa0011920:three_prime_UTR 15.0%
!!! TTGTTTTTTTTTTAAAACCA+AGG + chr1_1:17966372-17966391 None:intergenic 15.0%
!!! TTGGTTTTAAAAAAAAAACA+AGG - chr1_1:17966371-17966390 Msa0011920:intron 15.0%
!!! TGGTTTTAAAAAAAAAACAA+GGG - chr1_1:17966372-17966391 Msa0011920:intron 15.0%
!!! TTTGAATTTTGATATTATGT+TGG - chr1_1:17966532-17966551 Msa0011920:intron 15.0%
!! TCTTTCATATATATAAGTTT+AGG - chr1_1:17967507-17967526 Msa0011920:three_prime_UTR 15.0%
!!! CTTTTATTTATAATACTATG+TGG + chr1_1:17967676-17967695 None:intergenic 15.0%
!! GATTAACATAATTTCTTATT+AGG + chr1_1:17967866-17967885 None:intergenic 15.0%
!!! TAACTTCAAAATATTTTACA+AGG + chr1_1:17967904-17967923 None:intergenic 15.0%
!!! TTTGTAAAATTATTCTTTTG+CGG - chr1_1:17968310-17968329 Msa0011920:intron 15.0%
!! TAATCTTATGATTTATGAAT+AGG + chr1_1:17968665-17968684 None:intergenic 15.0%
!!! CAATTATATTTCTGTAATTT+TGG - chr1_1:17969158-17969177 Msa0011920:intron 15.0%
!!! ATGATTTGTTTACTTTAATT+AGG - chr1_1:17969953-17969972 Msa0011920:intron 15.0%
!! TTAGGATCATTAAAATTATT+AGG - chr1_1:17969971-17969990 Msa0011920:intron 15.0%
!!! TTGAAAAAGTTTTTATAAGT+GGG - chr1_1:17970680-17970699 Msa0011920:intron 15.0%
!!! TAAATTTTTCTTTAATGTTC+TGG - chr1_1:17970801-17970820 Msa0011920:intron 15.0%
!!! AAATTATTTGGGATTTAAAA+AGG - chr1_1:17971199-17971218 Msa0011920:intron 15.0%
!! AAATAAAAATAGCCAAAATA+AGG + chr1_1:17978404-17978423 None:intergenic 15.0%
!! TAAATTTAACTAAAGAAGTT+AGG + chr1_1:17978439-17978458 None:intergenic 15.0%
!! ATAAAATAACTGAGAAAATA+AGG + chr1_1:17978629-17978648 None:intergenic 15.0%
!! AATGAGATATGAATTAAATT+AGG - chr1_1:17979559-17979578 Msa0011920:intron 15.0%
!! TATTGTTGTATACTAATATT+TGG + chr1_1:17979843-17979862 None:intergenic 15.0%
!!! TTTTTTATTTGGTAACTATT+TGG + chr1_1:17980131-17980150 None:intergenic 15.0%
!! AAAATCATAAATTATATGTC+AGG + chr1_1:17980256-17980275 None:intergenic 15.0%
!!! AATTTTGTAAAGAATTTTTG+TGG - chr1_1:17980308-17980327 Msa0011920:CDS 15.0%
!! ATAAAAGCAATAAAAAAACT+GGG + chr1_1:17981889-17981908 None:intergenic 15.0%
!! TATAAAAGCAATAAAAAAAC+TGG + chr1_1:17981890-17981909 None:intergenic 15.0%
!! AAATGCAAACAATATATTTA+GGG + chr1_1:17982058-17982077 None:intergenic 15.0%
!! AATATATCAACTAATAAAGT+TGG + chr1_1:17982132-17982151 None:intergenic 15.0%
!!! TTATTAGTTGATATATTGTT+AGG - chr1_1:17982135-17982154 Msa0011920:intron 15.0%
!!! TATTAGTTGATATATTGTTA+GGG - chr1_1:17982136-17982155 Msa0011920:intron 15.0%
!! TATATTAACAGGTAAAAAAA+AGG + chr1_1:17982775-17982794 None:intergenic 15.0%
!!! AAGTCAAATTTTATATTAAC+AGG + chr1_1:17982786-17982805 None:intergenic 15.0%
!!! TTTTTAAAAAACTTGGTATC+TGG + chr1_1:17962207-17962226 None:intergenic 20.0%
!! ATATTGTAAAAAGGATACAA+TGG - chr1_1:17962321-17962340 Msa0011920:intron 20.0%
!!! GTTTTGATGAATGTTATAAT+TGG - chr1_1:17962355-17962374 Msa0011920:intron 20.0%
!! ACACTTATACCTATATATAA+AGG + chr1_1:17962413-17962432 None:intergenic 20.0%
!!! ACATTTTCGAAAACTTAAAA+GGG + chr1_1:17962517-17962536 None:intergenic 20.0%
!!! AAAAGTTTTCTATAAATCAC+TGG + chr1_1:17962727-17962746 None:intergenic 20.0%
!! TAGAAGAATATCTTATACAT+AGG - chr1_1:17962839-17962858 Msa0011920:three_prime_UTR 20.0%
!!! TCCTTTTGTTAATACTTAAA+TGG - chr1_1:17962967-17962986 Msa0011920:three_prime_UTR 20.0%
!! TCCATTTAAGTATTAACAAA+AGG + chr1_1:17962971-17962990 None:intergenic 20.0%
!! TATAAAAAGTAATGACCAAA+TGG + chr1_1:17963558-17963577 None:intergenic 20.0%
!! ATCAATGTTACATTTAATAC+AGG + chr1_1:17963649-17963668 None:intergenic 20.0%
!!! TTGAAATTTATTTTACTTGC+AGG - chr1_1:17963668-17963687 Msa0011920:intron 20.0%
!!! TCATTTTAGATTTCATTTCA+CGG + chr1_1:17963743-17963762 None:intergenic 20.0%
!! ATATTTCCATCAATTACTTT+GGG - chr1_1:17963810-17963829 Msa0011920:intron 20.0%
!!! TTCTGAAACAAATATCATTT+CGG - chr1_1:17963875-17963894 Msa0011920:intron 20.0%
!! TTCAATATATGAGGAAAAAT+TGG - chr1_1:17964067-17964086 Msa0011920:three_prime_UTR 20.0%
!!! AGAAAGAAAAAAAAAAGTGT+AGG + chr1_1:17964542-17964561 None:intergenic 20.0%
!! TTATGACAGTAAATAAAACT+TGG + chr1_1:17964797-17964816 None:intergenic 20.0%
!! TTAGGTAAAAGACATATAAA+TGG + chr1_1:17964948-17964967 None:intergenic 20.0%
!! TTGCTAATATCTTTAAATAC+AGG - chr1_1:17965219-17965238 Msa0011920:intron 20.0%
!! TGCTAATATCTTTAAATACA+GGG - chr1_1:17965220-17965239 Msa0011920:intron 20.0%
!! ACATAGTTCATTTATATCAA+AGG + chr1_1:17965648-17965667 None:intergenic 20.0%
!!! GCCTTGATATTTTTATTATT+TGG - chr1_1:17965757-17965776 Msa0011920:three_prime_UTR 20.0%
!! CCCAAATAATAAAAATATCA+AGG + chr1_1:17965761-17965780 None:intergenic 20.0%
!!! GGATTTAATGTTTTGAATTT+TGG - chr1_1:17966501-17966520 Msa0011920:intron 20.0%
!!! TTTCGTAATGTTTTGAATTT+TGG - chr1_1:17966567-17966586 Msa0011920:intron 20.0%
!! TAAAACCTTTCATAAGATTT+AGG - chr1_1:17966617-17966636 Msa0011920:intron 20.0%
!! TATATCATAGTAGTTAATAG+CGG + chr1_1:17966839-17966858 None:intergenic 20.0%
!! TGTTTACTTATTGTGTTTAA+TGG - chr1_1:17967180-17967199 Msa0011920:three_prime_UTR 20.0%
!!! AGAATAGTGTTATTAGTATA+AGG - chr1_1:17967349-17967368 Msa0011920:intron 20.0%
!! AATATTCACATATAAGATGA+GGG + chr1_1:17968034-17968053 None:intergenic 20.0%
!! AAATATTCACATATAAGATG+AGG + chr1_1:17968035-17968054 None:intergenic 20.0%
!!! TAATTTTTGCTTTTTGAAGT+AGG - chr1_1:17968088-17968107 Msa0011920:intron 20.0%
!!! TGATCAATCTTTATTTTAGT+TGG + chr1_1:17968424-17968443 None:intergenic 20.0%
!! TCTATTATCAAATACTTGAT+TGG - chr1_1:17968797-17968816 Msa0011920:intron 20.0%
!!! AGATATCATAAGATATTTTC+AGG + chr1_1:17968847-17968866 None:intergenic 20.0%
!! ATTATAAGCTGTTGAAATTT+GGG + chr1_1:17969106-17969125 None:intergenic 20.0%
!! AATTATAAGCTGTTGAAATT+TGG + chr1_1:17969107-17969126 None:intergenic 20.0%
!!! ATTTCTGTAATTTTGGTATT+AGG - chr1_1:17969165-17969184 Msa0011920:intron 20.0%
!! AATTATTAGGCATATTATAC+AGG - chr1_1:17969984-17970003 Msa0011920:intron 20.0%
!! ATCTATTTGAAAGTTACTAA+TGG - chr1_1:17970475-17970494 Msa0011920:intron 20.0%
!! TATCATCTTGATGTTAAATT+TGG - chr1_1:17970646-17970665 Msa0011920:intron 20.0%
!!! GTTGAAAAAGTTTTTATAAG+TGG - chr1_1:17970679-17970698 Msa0011920:intron 20.0%
!! AAGAACGATAAATTATTACA+AGG + chr1_1:17970931-17970950 None:intergenic 20.0%
!! AAAAAGTAATGCTAGAAATT+GGG - chr1_1:17971336-17971355 Msa0011920:intron 20.0%
!! AACAACATGCAAAATAAAAA+GGG + chr1_1:17971820-17971839 None:intergenic 20.0%
!! TAACAACATGCAAAATAAAA+AGG + chr1_1:17971821-17971840 None:intergenic 20.0%
!!! TTACAATTTTGTAAGTAACT+AGG + chr1_1:17972008-17972027 None:intergenic 20.0%
!! ATTAGTTATGTATGGATATA+TGG + chr1_1:17972411-17972430 None:intergenic 20.0%
!! AAGATATTAAAGGATATTGA+AGG + chr1_1:17976814-17976833 None:intergenic 20.0%
!!! ATTTGATAGTTGTATTTGAA+AGG + chr1_1:17978360-17978379 None:intergenic 20.0%
!! TAAATTTATGATGCTTATAG+AGG - chr1_1:17978451-17978470 Msa0011920:intron 20.0%
!! TAAAATAAAAAACGCAATGA+AGG + chr1_1:17978566-17978585 None:intergenic 20.0%
!! TTAAACTTATTCAAGCAAAA+GGG + chr1_1:17978863-17978882 None:intergenic 20.0%
!! TTTAAACTTATTCAAGCAAA+AGG + chr1_1:17978864-17978883 None:intergenic 20.0%
!! AATCAAACCATCTTAAAATT+TGG + chr1_1:17979221-17979240 None:intergenic 20.0%
!!! AATTTTAAGATGGTTTGATT+TGG - chr1_1:17979221-17979240 Msa0011920:three_prime_UTR 20.0%
!! TAAATAACTAAGGGTAATAT+TGG + chr1_1:17979517-17979536 None:intergenic 20.0%
!! CAAAAAAGTGAGAATTAAAA+CGG - chr1_1:17979657-17979676 Msa0011920:intron 20.0%
!! TTAGTATACAACAATAAGAA+TGG - chr1_1:17979847-17979866 Msa0011920:intron 20.0%
!!! TAAGAATGGTCATAATTTTT+TGG - chr1_1:17979861-17979880 Msa0011920:intron 20.0%
!! AATAAATAATAAAAACCAGC+TGG - chr1_1:17980179-17980198 Msa0011920:three_prime_UTR 20.0%
!! TCATCTCAAGTATATATTAA+TGG + chr1_1:17980650-17980669 None:intergenic 20.0%
!! ATACTATATTTATAGTGAGT+AGG + chr1_1:17980814-17980833 None:intergenic 20.0%
!!! TATTGATAGCTCTAATATAA+AGG - chr1_1:17980925-17980944 Msa0011920:intron 20.0%
!! AAATATATAATTCCCTGATT+GGG + chr1_1:17980985-17981004 None:intergenic 20.0%
!! AAAATATATAATTCCCTGAT+TGG + chr1_1:17980986-17981005 None:intergenic 20.0%
!! AGAGTATGATTGTAAAATAA+CGG + chr1_1:17981118-17981137 None:intergenic 20.0%
!!! ACAATTTTACATCAATACAT+GGG + chr1_1:17981224-17981243 None:intergenic 20.0%
!!! ATGTATTGATGTAAAATTGT+GGG - chr1_1:17981224-17981243 Msa0011920:intron 20.0%
!! ATTTAAGCTGATTATTAACT+GGG + chr1_1:17981864-17981883 None:intergenic 20.0%
!! TATTTAAGCTGATTATTAAC+TGG + chr1_1:17981865-17981884 None:intergenic 20.0%
!! TAAAAGCAATAAAAAAACTG+GGG + chr1_1:17981888-17981907 None:intergenic 20.0%
!! AATGCAAACAATATATTTAG+GGG + chr1_1:17982057-17982076 None:intergenic 20.0%
!! CAAATGCAAACAATATATTT+AGG + chr1_1:17982059-17982078 None:intergenic 20.0%
! TACGTATCTCCTTTATATAT+AGG - chr1_1:17962401-17962420 Msa0011920:intron 25.0%
! AAAATTAAGGACAAAGACAT+GGG - chr1_1:17962447-17962466 Msa0011920:intron 25.0%
!! CACATTTTCGAAAACTTAAA+AGG + chr1_1:17962518-17962537 None:intergenic 25.0%
! AGTAGAAAGTCAAAAACAAA+AGG + chr1_1:17962702-17962721 None:intergenic 25.0%
!! ATCTTATACATAGGATTTTG+AGG - chr1_1:17962848-17962867 Msa0011920:three_prime_UTR 25.0%
!! TCTTATACATAGGATTTTGA+GGG - chr1_1:17962849-17962868 Msa0011920:three_prime_UTR 25.0%
! CATTGTTTGTGATTTACAAT+AGG - chr1_1:17962999-17963018 Msa0011920:three_prime_UTR 25.0%
! TAAATCCAACACTAATATAG+AGG + chr1_1:17963142-17963161 None:intergenic 25.0%
! AAAGATCCAATACAATAGTA+AGG - chr1_1:17963269-17963288 Msa0011920:intron 25.0%
! TAATATTGATAGATGCCATT+TGG - chr1_1:17963540-17963559 Msa0011920:intron 25.0%
! GATATTTCCATCAATTACTT+TGG - chr1_1:17963809-17963828 Msa0011920:intron 25.0%
! ATTTGTTTCAGAATATGTTG+TGG + chr1_1:17963868-17963887 None:intergenic 25.0%
!! AAAGAATCATCTTTTCGTAA+TGG + chr1_1:17964017-17964036 None:intergenic 25.0%
!! TATATTGAAGACATTGATTG+AGG + chr1_1:17964056-17964075 None:intergenic 25.0%
! ATCAATGTCTTCAATATATG+AGG - chr1_1:17964058-17964077 Msa0011920:three_prime_UTR 25.0%
! AAAAATTGGATCAAGTTACT+AGG - chr1_1:17964081-17964100 Msa0011920:three_prime_UTR 25.0%
! AAAATTGGATCAAGTTACTA+GGG - chr1_1:17964082-17964101 Msa0011920:three_prime_UTR 25.0%
!!! GGATTTTCAGATTTTAAAGA+TGG - chr1_1:17964293-17964312 Msa0011920:intron 25.0%
!!! TTCAGATTTTAAAGATGGAT+TGG - chr1_1:17964298-17964317 Msa0011920:intron 25.0%
! GATAAAAACTAGCATAAATC+TGG + chr1_1:17964495-17964514 None:intergenic 25.0%
!! TAGTTTTTATCCTTCTCTAT+TGG - chr1_1:17964504-17964523 Msa0011920:intron 25.0%
!!! ATGGAAAGTATCACAAATAA+TGG - chr1_1:17964667-17964686 Msa0011920:intron 25.0%
! GATAATGACAAATATATGTC+GGG + chr1_1:17964775-17964794 None:intergenic 25.0%
! GGATAATGACAAATATATGT+CGG + chr1_1:17964776-17964795 None:intergenic 25.0%
! TATTTACTGTCATAACTAGT+TGG - chr1_1:17964802-17964821 Msa0011920:intron 25.0%
! ACAAAAGCAATGAAAACAAT+GGG + chr1_1:17964903-17964922 None:intergenic 25.0%
! AACAAAAGCAATGAAAACAA+TGG + chr1_1:17964904-17964923 None:intergenic 25.0%
!!! TTGTTTTCATTGCTTTTGTT+AGG - chr1_1:17964904-17964923 Msa0011920:intron 25.0%
! TTGTTCAATTTCATTACTTG+AGG - chr1_1:17965299-17965318 Msa0011920:intron 25.0%
!! TACATTAGTGATTTGCAAAA+GGG + chr1_1:17965786-17965805 None:intergenic 25.0%
!!! TTTTGCTTCCTTTTTTAAAG+AGG - chr1_1:17965932-17965951 Msa0011920:intron 25.0%
! GTTGGAAATATACAGAAAAA+TGG - chr1_1:17966032-17966051 Msa0011920:intron 25.0%
! TTTCACGTAAAATGAAATAG+CGG + chr1_1:17966337-17966356 None:intergenic 25.0%
! AGATTAAAACTAACTTTGTG+GGG + chr1_1:17967392-17967411 None:intergenic 25.0%
! CAGATTAAAACTAACTTTGT+GGG + chr1_1:17967393-17967412 None:intergenic 25.0%
! TCAGATTAAAACTAACTTTG+TGG + chr1_1:17967394-17967413 None:intergenic 25.0%
!!! ACAAAGTTAGTTTTAATCTG+AGG - chr1_1:17967393-17967412 Msa0011920:intron 25.0%
!!! CAACTACAGAATTTTAGTTA+CGG + chr1_1:17967534-17967553 None:intergenic 25.0%
! ACTAGTTAATCATATTCTGT+AGG - chr1_1:17967775-17967794 Msa0011920:intron 25.0%
! AAAATACCAAAGTTAATGAC+TGG - chr1_1:17967808-17967827 Msa0011920:intron 25.0%
! ATATTCACATATAAGATGAG+GGG + chr1_1:17968033-17968052 None:intergenic 25.0%
! GTATATTCTTACGAAATTCT+TGG + chr1_1:17968067-17968086 None:intergenic 25.0%
!! TCTTTTGCGGAAAAATTTAT+AGG - chr1_1:17968323-17968342 Msa0011920:intron 25.0%
! AATTCTTTCCATATTGCAAA+AGG + chr1_1:17968362-17968381 None:intergenic 25.0%
! TGGAGTTAAGAAGTTAATTA+GGG + chr1_1:17968733-17968752 None:intergenic 25.0%
! TTGGAGTTAAGAAGTTAATT+AGG + chr1_1:17968734-17968753 None:intergenic 25.0%
!! AAATCATGTATGTGCTATTA+TGG - chr1_1:17968898-17968917 Msa0011920:intron 25.0%
!!! AAAACTGGCTTGATAAAATA+AGG + chr1_1:17969066-17969085 None:intergenic 25.0%
! TTATAAGCTGTTGAAATTTG+GGG + chr1_1:17969105-17969124 None:intergenic 25.0%
! ATAATTGCAAACCAAAAACT+AGG + chr1_1:17969210-17969229 None:intergenic 25.0%
! TGCATAAGTGTTACAATATT+AGG - chr1_1:17969552-17969571 Msa0011920:intron 25.0%
! GCATAAGTGTTACAATATTA+GGG - chr1_1:17969553-17969572 Msa0011920:intron 25.0%
! CATAAGTGTTACAATATTAG+GGG - chr1_1:17969554-17969573 Msa0011920:intron 25.0%
!! TGTACATTTTCCTTCTTTTA+TGG + chr1_1:17969668-17969687 None:intergenic 25.0%
! TAAAAGAAGGAAAATGTACA+TGG - chr1_1:17969668-17969687 Msa0011920:intron 25.0%
! AAAAGAAGGAAAATGTACAT+GGG - chr1_1:17969669-17969688 Msa0011920:intron 25.0%
! TAAATCCTAACAAACTATCT+GGG + chr1_1:17969916-17969935 None:intergenic 25.0%
! ATAAATCCTAACAAACTATC+TGG + chr1_1:17969917-17969936 None:intergenic 25.0%
! TGAATTAAGCCTATATAGAA+TGG - chr1_1:17970038-17970057 Msa0011920:intron 25.0%
! CAATTGAATCCATTCTATAT+AGG + chr1_1:17970050-17970069 None:intergenic 25.0%
! AATTGTGTAGTTAAATCACA+TGG - chr1_1:17970065-17970084 Msa0011920:intron 25.0%
!!! TGAGTCAGTAATTTTTTCTT+AGG + chr1_1:17970145-17970164 None:intergenic 25.0%
! TTCTTCAATGCTAAAAAAAC+AGG - chr1_1:17970226-17970245 Msa0011920:intron 25.0%
!! CTAAAAAAACAGGCATATTT+TGG - chr1_1:17970236-17970255 Msa0011920:intron 25.0%
! AAATAGATACCTAAAAGAGA+TGG + chr1_1:17970463-17970482 None:intergenic 25.0%
! TTATTTAAAAAGCTACTCCA+CGG + chr1_1:17970552-17970571 None:intergenic 25.0%
!! AAGCTGTTTCAGAAATTATT+TGG - chr1_1:17971187-17971206 Msa0011920:intron 25.0%
!! AGCTGTTTCAGAAATTATTT+GGG - chr1_1:17971188-17971207 Msa0011920:intron 25.0%
! GAAAAAGTAATGCTAGAAAT+TGG - chr1_1:17971335-17971354 Msa0011920:intron 25.0%
! AATTCACACATGAAAGTTAT+TGG + chr1_1:17971415-17971434 None:intergenic 25.0%
!!! CTAAAGTGATGGATATTTAT+AGG - chr1_1:17971870-17971889 Msa0011920:intron 25.0%
! GTATTAAATTAGTAACACTC+TGG + chr1_1:17971949-17971968 None:intergenic 25.0%
! ATAGAACAGATAATTGACAA+TGG - chr1_1:17971975-17971994 Msa0011920:intron 25.0%
! ATAAGAGAATTGAGTAGTAT+CGG + chr1_1:17972093-17972112 None:intergenic 25.0%
!! TTTGAGAAGTATAACCAAAT+GGG + chr1_1:17972122-17972141 None:intergenic 25.0%
!!! ATTGAAGGATTAGTTATGTA+TGG + chr1_1:17972419-17972438 None:intergenic 25.0%
!!! GTTTTTTCCTTAAAAGATCT+TGG + chr1_1:17973328-17973347 None:intergenic 25.0%
! TGGAACAGTCAATAAATATA+AGG + chr1_1:17973812-17973831 None:intergenic 25.0%
!! ATGTGCTTTTCAATGAATAT+CGG + chr1_1:17974404-17974423 None:intergenic 25.0%
! TAACTATAAGTGCTTATCAT+CGG + chr1_1:17974451-17974470 None:intergenic 25.0%
!! TACAATTTTCTCAGAACATT+TGG + chr1_1:17974576-17974595 None:intergenic 25.0%
! TGAAATAAAAACTGAGTGAA+TGG - chr1_1:17974830-17974849 Msa0011920:intron 25.0%
! ATAACCAGTAACATATGTAA+AGG - chr1_1:17975018-17975037 Msa0011920:intron 25.0%
! TAACCAGTAACATATGTAAA+GGG - chr1_1:17975019-17975038 Msa0011920:intron 25.0%
!!! AGACGAGTTTTATTATTGAA+TGG - chr1_1:17975157-17975176 Msa0011920:three_prime_UTR 25.0%
!!! GACGAGTTTTATTATTGAAT+GGG - chr1_1:17975158-17975177 Msa0011920:three_prime_UTR 25.0%
! GCAGAAATAGTATTTACAAT+AGG - chr1_1:17975268-17975287 Msa0011920:intron 25.0%
! AGTATTTACAATAGGAGAAT+TGG - chr1_1:17975276-17975295 Msa0011920:intron 25.0%
!! ACAGAAACATTATTTGCTTT+TGG - chr1_1:17975301-17975320 Msa0011920:intron 25.0%
! ACAGAACAAATCGAAATTTA+GGG - chr1_1:17975578-17975597 Msa0011920:intron 25.0%
!! AATCGAAATTTAGGGTTTAA+TGG - chr1_1:17975586-17975605 Msa0011920:intron 25.0%
! TAATGGTGAAAAAAATTGAG+AGG - chr1_1:17975603-17975622 Msa0011920:intron 25.0%
! ACCATCAAAATGTTTAGAAA+AGG - chr1_1:17976221-17976240 Msa0011920:intron 25.0%
!! TCCTTTTCTAAACATTTTGA+TGG + chr1_1:17976225-17976244 None:intergenic 25.0%
!! TCGTCTTACATTTTCTATTA+TGG + chr1_1:17976588-17976607 None:intergenic 25.0%
! AGATCATTGGAAGATATTAA+AGG + chr1_1:17976824-17976843 None:intergenic 25.0%
! AGTATTGTTGTATAGGAATT+CGG - chr1_1:17977534-17977553 Msa0011920:intron 25.0%
! TGTATTTATGTTGTAGTATG+TGG - chr1_1:17977605-17977624 Msa0011920:intron 25.0%
! GTATTTATGTTGTAGTATGT+GGG - chr1_1:17977606-17977625 Msa0011920:intron 25.0%
! TTTGTAGAGAAAAAATGCTT+TGG - chr1_1:17977778-17977797 Msa0011920:intron 25.0%
! TACAATGAATCTAAGCTAAA+TGG + chr1_1:17978134-17978153 None:intergenic 25.0%
! TATTTCATTTCCCTTCATAA+AGG - chr1_1:17978328-17978347 Msa0011920:intron 25.0%
!! TTTTGCATTAGAATGATGAA+CGG + chr1_1:17978815-17978834 None:intergenic 25.0%
!!! ACTTTATAAGCTGATTTTGT+GGG - chr1_1:17978964-17978983 Msa0011920:intron 25.0%
! AGACTTAGAATTTGGATTTA+GGG + chr1_1:17979001-17979020 None:intergenic 25.0%
! TAGACTTAGAATTTGGATTT+AGG + chr1_1:17979002-17979021 None:intergenic 25.0%
! AAGCTGAATAATAAAGATCT+AGG + chr1_1:17979026-17979045 None:intergenic 25.0%
!!! TGTTAGTCTTAGAAATTACA+TGG - chr1_1:17979259-17979278 Msa0011920:intron 25.0%
!!! GTTAGTCTTAGAAATTACAT+GGG - chr1_1:17979260-17979279 Msa0011920:intron 25.0%
!!! TTAGTCTTAGAAATTACATG+GGG - chr1_1:17979261-17979280 Msa0011920:intron 25.0%
! TTTGAAAGTGACAGTTAAAT+CGG + chr1_1:17979467-17979486 None:intergenic 25.0%
! TTACCCTTAGTTATTTATTG+CGG - chr1_1:17979520-17979539 Msa0011920:intron 25.0%
!!! TAAATTTGTTTTAGCAACTG+CGG - chr1_1:17979693-17979712 Msa0011920:intron 25.0%
!! GAGAAAACTGTTTGAAATAA+AGG - chr1_1:17979799-17979818 Msa0011920:intron 25.0%
!! AAAACTGTTTGAAATAAAGG+AGG - chr1_1:17979802-17979821 Msa0011920:intron 25.0%
!! AAACTGTTTGAAATAAAGGA+GGG - chr1_1:17979803-17979822 Msa0011920:intron 25.0%
!!! TGGTCATAATTTTTTGGAAA+CGG - chr1_1:17979867-17979886 Msa0011920:intron 25.0%
! AAAATGTGTTTATAAGTGGT+GGG + chr1_1:17980005-17980024 None:intergenic 25.0%
! AAAAATGTGTTTATAAGTGG+TGG + chr1_1:17980006-17980025 None:intergenic 25.0%
! CTGAAAAATGTGTTTATAAG+TGG + chr1_1:17980009-17980028 None:intergenic 25.0%
!! CACTTATAAACACATTTTTC+AGG - chr1_1:17980007-17980026 Msa0011920:intron 25.0%
! ATATAAAATTGTCACCTTGT+AGG + chr1_1:17980504-17980523 None:intergenic 25.0%
!! TGCTTAATTTTCCAGTTTTT+TGG - chr1_1:17980554-17980573 Msa0011920:CDS 25.0%
! GTATATATTAATGGCATGTA+AGG + chr1_1:17980641-17980660 None:intergenic 25.0%
! ATCACACACCTATTATATTA+GGG + chr1_1:17981079-17981098 None:intergenic 25.0%
!!! AAGTTGATAAGATTAGAACA+TGG - chr1_1:17981177-17981196 Msa0011920:intron 25.0%
! ATAAGATTAGAACATGGATT+TGG - chr1_1:17981183-17981202 Msa0011920:intron 25.0%
!! CAATTTTACATCAATACATG+GGG + chr1_1:17981223-17981242 None:intergenic 25.0%
!! CACAATTTTACATCAATACA+TGG + chr1_1:17981225-17981244 None:intergenic 25.0%
!! CATGTATTGATGTAAAATTG+TGG - chr1_1:17981223-17981242 Msa0011920:intron 25.0%
! TACAATTGTGGTTTATTACA+TGG - chr1_1:17981389-17981408 Msa0011920:intron 25.0%
! ACAATTGTGGTTTATTACAT+GGG - chr1_1:17981390-17981409 Msa0011920:intron 25.0%
! AAGAAAAAGAAGAAACGTTA+GGG - chr1_1:17981426-17981445 Msa0011920:intron 25.0%
! AATATATTTAGGGGTTAACT+AGG + chr1_1:17982048-17982067 None:intergenic 25.0%
! CAAAAAGTAAGAACTTAAAC+AGG + chr1_1:17982093-17982112 None:intergenic 25.0%
!!! CTGTTTAAGTTCTTACTTTT+TGG - chr1_1:17982091-17982110 Msa0011920:intron 25.0%
! GCTGTTAATTTATATTGTTC+AGG - chr1_1:17982259-17982278 Msa0011920:intron 25.0%
! AATGAGATGGTAAAATATCT+TGG + chr1_1:17982368-17982387 None:intergenic 25.0%
! TAGTTTATGCTATACTTCAA+TGG - chr1_1:17982392-17982411 Msa0011920:intron 25.0%
! TGTAATGTAAATAGTTTGAC+AGG - chr1_1:17982664-17982683 Msa0011920:CDS 25.0%
! ATACCGCACTCAAATAATTT+TGG - chr1_1:17961962-17961981 Msa0011920:three_prime_UTR 30.0%
CTACCAAAATTATTTGAGTG+CGG + chr1_1:17961968-17961987 None:intergenic 30.0%
TGTGTTAAACTAGTTCATAC+AGG - chr1_1:17962107-17962126 Msa0011920:intron 30.0%
GTGTTAAACTAGTTCATACA+GGG - chr1_1:17962108-17962127 Msa0011920:intron 30.0%
AAAAAGTTCCCTTTACAATG+TGG - chr1_1:17962226-17962245 Msa0011920:intron 30.0%
AAAAGTTCCCTTTACAATGT+GGG - chr1_1:17962227-17962246 Msa0011920:intron 30.0%
AGGAATAATCTCACAACAAT+AGG + chr1_1:17962283-17962302 None:intergenic 30.0%
TATAGGTATAAGTGTATGTG+AGG - chr1_1:17962418-17962437 Msa0011920:intron 30.0%
GAAAATTAAGGACAAAGACA+TGG - chr1_1:17962446-17962465 Msa0011920:intron 30.0%
! TTTGTTGCTTGTTTCATTTC+AGG - chr1_1:17962477-17962496 Msa0011920:intron 30.0%
! AGTTTTCGAAAATGTGTTAC+CGG - chr1_1:17962522-17962541 Msa0011920:intron 30.0%
CTGTAAATTTATGCTTCATC+CGG + chr1_1:17962544-17962563 None:intergenic 30.0%
!!! TTTTGTAGTGTTAATTTGCG+TGG - chr1_1:17962638-17962657 Msa0011920:intron 30.0%
! CTTATACATAGGATTTTGAG+GGG - chr1_1:17962850-17962869 Msa0011920:three_prime_UTR 30.0%
!! TTATACATAGGATTTTGAGG+GGG - chr1_1:17962851-17962870 Msa0011920:three_prime_UTR 30.0%
!! TAGTGTTGGATTTAAGTTGT+TGG - chr1_1:17963148-17963167 Msa0011920:three_prime_UTR 30.0%
!! AGTGTTGGATTTAAGTTGTT+GGG - chr1_1:17963149-17963168 Msa0011920:three_prime_UTR 30.0%
TTGAGTATATATAGCAAGCT+TGG - chr1_1:17963314-17963333 Msa0011920:intron 30.0%
TGAGTATATATAGCAAGCTT+GGG - chr1_1:17963315-17963334 Msa0011920:intron 30.0%
TCAATTGAGATTGTGATGTA+TGG - chr1_1:17963377-17963396 Msa0011920:intron 30.0%
ACAAGATTGATGAAAGAATG+CGG + chr1_1:17963517-17963536 None:intergenic 30.0%
TTCCATTTCCAATTAGATCA+GGG + chr1_1:17963719-17963738 None:intergenic 30.0%
ACATTTATACGATTCTTCAG+AGG - chr1_1:17963917-17963936 Msa0011920:intron 30.0%
GAAGATTCTCAAAAGAAAGT+GGG - chr1_1:17964104-17964123 Msa0011920:intron 30.0%
AAGATTCTCAAAAGAAAGTG+GGG - chr1_1:17964105-17964124 Msa0011920:intron 30.0%
GAGATAACTCATTAAGTGTA+AGG + chr1_1:17964148-17964167 None:intergenic 30.0%
ACTACTACATGTATTCCAAA+AGG + chr1_1:17964268-17964287 None:intergenic 30.0%
GAATACATGTAGTAGTTCTT+TGG - chr1_1:17964272-17964291 Msa0011920:intron 30.0%
!!! CTTTTTTTCTCACTTGAATG+AGG - chr1_1:17964560-17964579 Msa0011920:intron 30.0%
!! TATTTTTACAAAGCCTAGTG+AGG - chr1_1:17964690-17964709 Msa0011920:intron 30.0%
ACATCCTTATCTTTCAAAGT+GGG + chr1_1:17964747-17964766 None:intergenic 30.0%
GTCAGTTCATAACATAGTAT+TGG - chr1_1:17964988-17965007 Msa0011920:intron 30.0%
TGTGCTTAAACATTTGTTCA+AGG + chr1_1:17965019-17965038 None:intergenic 30.0%
TGAACAAATGTTTAAGCACA+AGG - chr1_1:17965019-17965038 Msa0011920:intron 30.0%
! TTCCCTATAGCTTAAACTTT+TGG - chr1_1:17965133-17965152 Msa0011920:intron 30.0%
! TCCCTATAGCTTAAACTTTT+GGG - chr1_1:17965134-17965153 Msa0011920:intron 30.0%
TCCCAAAAGTTTAAGCTATA+GGG + chr1_1:17965138-17965157 None:intergenic 30.0%
ATCCCAAAAGTTTAAGCTAT+AGG + chr1_1:17965139-17965158 None:intergenic 30.0%
ACTTGTTCGCAATACTATTT+AGG + chr1_1:17965458-17965477 None:intergenic 30.0%
TTTGCCTTCAATACTCATTT+AGG + chr1_1:17965618-17965637 None:intergenic 30.0%
!! CCAAGCAAGTATTTTATTTG+GGG + chr1_1:17965734-17965753 None:intergenic 30.0%
!! CCCAAGCAAGTATTTTATTT+GGG + chr1_1:17965735-17965754 None:intergenic 30.0%
CCCAAATAAAATACTTGCTT+GGG - chr1_1:17965732-17965751 Msa0011920:intron 30.0%
CCAAATAAAATACTTGCTTG+GGG - chr1_1:17965733-17965752 Msa0011920:intron 30.0%
! CTACATTAGTGATTTGCAAA+AGG + chr1_1:17965787-17965806 None:intergenic 30.0%
TCAATTAGTTCAGTATCCTT+CGG - chr1_1:17965839-17965858 Msa0011920:three_prime_UTR 30.0%
!!! TTCCTTTTTTAAAGAGGAGA+AGG - chr1_1:17965938-17965957 Msa0011920:intron 30.0%
! AACCTTCTCCTCTTTAAAAA+AGG + chr1_1:17965943-17965962 None:intergenic 30.0%
!!! TTTTTTAAAGAGGAGAAGGT+TGG - chr1_1:17965942-17965961 Msa0011920:intron 30.0%
!! TTTTTAAAGAGGAGAAGGTT+GGG - chr1_1:17965943-17965962 Msa0011920:intron 30.0%
AACAAAGCCTTAGAGAATTT+GGG + chr1_1:17965973-17965992 None:intergenic 30.0%
AAACAAAGCCTTAGAGAATT+TGG + chr1_1:17965974-17965993 None:intergenic 30.0%
!! AAATTCTCTAAGGCTTTGTT+TGG - chr1_1:17965973-17965992 Msa0011920:intron 30.0%
!! AATTCTCTAAGGCTTTGTTT+GGG - chr1_1:17965974-17965993 Msa0011920:intron 30.0%
TAAACCAGAGTAGTTAATAG+CGG - chr1_1:17966178-17966197 Msa0011920:intron 30.0%
TGAAAATACAAGATTCTCCT+TGG - chr1_1:17966352-17966371 Msa0011920:intron 30.0%
CTTCCTTCTTTCATTCTTTA+CGG - chr1_1:17966439-17966458 Msa0011920:intron 30.0%
!! CGTAATGTTTTGAATTTTGG+TGG - chr1_1:17966570-17966589 Msa0011920:intron 30.0%
AACCTTTCATAAGATTTAGG+TGG - chr1_1:17966620-17966639 Msa0011920:intron 30.0%
AACCACCTAAATCTTATGAA+AGG + chr1_1:17966625-17966644 None:intergenic 30.0%
TGTGATTTATGAATGTGTCA+TGG - chr1_1:17966655-17966674 Msa0011920:intron 30.0%
GTGATTTATGAATGTGTCAT+GGG - chr1_1:17966656-17966675 Msa0011920:intron 30.0%
TCCTAACAGTTATGAAATAG+CGG - chr1_1:17966752-17966771 Msa0011920:intron 30.0%
GAACTCAAAAATTGTATTGG+GGG + chr1_1:17966888-17966907 None:intergenic 30.0%
GGAACTCAAAAATTGTATTG+GGG + chr1_1:17966889-17966908 None:intergenic 30.0%
GGGAACTCAAAAATTGTATT+GGG + chr1_1:17966890-17966909 None:intergenic 30.0%
TAAAAAAATCCCCCTCATTT+GGG + chr1_1:17966912-17966931 None:intergenic 30.0%
ATAAAAAAATCCCCCTCATT+TGG + chr1_1:17966913-17966932 None:intergenic 30.0%
AAATAGAAGACATTGGGAAT+GGG + chr1_1:17966971-17966990 None:intergenic 30.0%
TGGAAGAAATAGAAGACATT+GGG + chr1_1:17966977-17966996 None:intergenic 30.0%
!! GCTTTAGATATTTTGCACTT+AGG + chr1_1:17967061-17967080 None:intergenic 30.0%
GAAGTTTGAACATATACTAG+TGG + chr1_1:17967094-17967113 None:intergenic 30.0%
TGTGTTTAATGGAAGACTTT+CGG - chr1_1:17967191-17967210 Msa0011920:three_prime_UTR 30.0%
!! CTTGGCAGTATTTTATTTGT+AGG + chr1_1:17967304-17967323 None:intergenic 30.0%
TAGAAACAAAGACTTCTTCT+TGG + chr1_1:17967322-17967341 None:intergenic 30.0%
TAACTTTGTGGGGTTAAATT+CGG + chr1_1:17967382-17967401 None:intergenic 30.0%
AAATAGAGCTTATCAAGCAA+GGG + chr1_1:17967423-17967442 None:intergenic 30.0%
TAAATAGAGCTTATCAAGCA+AGG + chr1_1:17967424-17967443 None:intergenic 30.0%
TTGCTTGATAAGCTCTATTT+AGG - chr1_1:17967423-17967442 Msa0011920:three_prime_UTR 30.0%
CGTTGCTGAAAATCATTTAA+GGG + chr1_1:17967560-17967579 None:intergenic 30.0%
! CCTTAAATGATTTTCAGCAA+CGG - chr1_1:17967558-17967577 Msa0011920:intron 30.0%
! CTTAAATGATTTTCAGCAAC+GGG - chr1_1:17967559-17967578 Msa0011920:intron 30.0%
CACATTGTAAAGTTAACTCT+AGG - chr1_1:17967704-17967723 Msa0011920:intron 30.0%
TAGGAAACATCCTAAAGTTA+AGG - chr1_1:17967723-17967742 Msa0011920:intron 30.0%
AGGAAACATCCTAAAGTTAA+GGG - chr1_1:17967724-17967743 Msa0011920:intron 30.0%
TGTGCTTATCTTAACGTTTA+AGG + chr1_1:17967837-17967856 None:intergenic 30.0%
TGAAGTTATTCTAAGTTCGT+CGG - chr1_1:17967916-17967935 Msa0011920:intron 30.0%
TATTCACATATAAGATGAGG+GGG + chr1_1:17968032-17968051 None:intergenic 30.0%
AATATTGACGTTCTTGAAGA+TGG - chr1_1:17968155-17968174 Msa0011920:intron 30.0%
TTTGAAGGGTAGATACAATA+TGG + chr1_1:17968212-17968231 None:intergenic 30.0%
TATTGTATCTACCCTTCAAA+AGG - chr1_1:17968212-17968231 Msa0011920:intron 30.0%
ATTGTATCTACCCTTCAAAA+GGG - chr1_1:17968213-17968232 Msa0011920:intron 30.0%
TGCGGAAAAATTTATAGGTT+AGG - chr1_1:17968328-17968347 Msa0011920:intron 30.0%
GCGGAAAAATTTATAGGTTA+GGG - chr1_1:17968329-17968348 Msa0011920:intron 30.0%
! GTTAGAAACCTTTTGCAATA+TGG - chr1_1:17968351-17968370 Msa0011920:intron 30.0%
! TATCGATTGAATGAGATGAT+AGG - chr1_1:17968488-17968507 Msa0011920:intron 30.0%
ATTGAAAGATAAGCTACAGA+AGG - chr1_1:17968511-17968530 Msa0011920:intron 30.0%
TGAATTCCTAATCGTCTTAA+AGG - chr1_1:17968630-17968649 Msa0011920:intron 30.0%
GAATTCCTAATCGTCTTAAA+GGG - chr1_1:17968631-17968650 Msa0011920:intron 30.0%
GGAGTTAAGAAGTTAATTAG+GGG + chr1_1:17968732-17968751 None:intergenic 30.0%
!! TAATGGGAAGTTTTCAAGAT+TGG + chr1_1:17968753-17968772 None:intergenic 30.0%
AACTGTTAGGACTGAATAAT+GGG + chr1_1:17968769-17968788 None:intergenic 30.0%
TAACTGTTAGGACTGAATAA+TGG + chr1_1:17968770-17968789 None:intergenic 30.0%
ATTATTCAGTCCTAACAGTT+AGG - chr1_1:17968769-17968788 Msa0011920:intron 30.0%
TAGTACATTCCTTTCAAAGT+TGG - chr1_1:17968935-17968954 Msa0011920:intron 30.0%
AGCTATATACCAACTTTGAA+AGG + chr1_1:17968947-17968966 None:intergenic 30.0%
TGGTATATAGCTTCCAATTT+AGG - chr1_1:17968955-17968974 Msa0011920:intron 30.0%
TGTTAGTCAAAAGATTTGAG+AGG + chr1_1:17969282-17969301 None:intergenic 30.0%
! TCTCTAATGTCTTTAGGAAT+TGG + chr1_1:17969369-17969388 None:intergenic 30.0%
AATTCCTAAAGACATTAGAG+AGG - chr1_1:17969368-17969387 Msa0011920:intron 30.0%
AATTCCTCTCTAATGTCTTT+AGG + chr1_1:17969375-17969394 None:intergenic 30.0%
AAAGACATTAGAGAGGAATT+TGG - chr1_1:17969375-17969394 Msa0011920:intron 30.0%
! ATTTTCCTTCTTTTATGGCA+TGG + chr1_1:17969663-17969682 None:intergenic 30.0%
!! TTAGTAAGCTTTAGATTGAG+AGG - chr1_1:17969795-17969814 Msa0011920:intron 30.0%
!! TAGTAAGCTTTAGATTGAGA+GGG - chr1_1:17969796-17969815 Msa0011920:intron 30.0%
!!! TTTTGGAATTCACAAACCAA+AGG - chr1_1:17970253-17970272 Msa0011920:intron 30.0%
ATCAAATATAAGTCTCTTGC+GGG + chr1_1:17970300-17970319 None:intergenic 30.0%
CATCAAATATAAGTCTCTTG+CGG + chr1_1:17970301-17970320 None:intergenic 30.0%
!!! TGATGAATTTTTTTACCTGC+AGG - chr1_1:17970316-17970335 Msa0011920:intron 30.0%
! TATGTGAATCCATCTCTTTT+AGG - chr1_1:17970451-17970470 Msa0011920:intron 30.0%
TTAATCCATACCAAGAACAA+TGG + chr1_1:17970501-17970520 None:intergenic 30.0%
AAAAGAACTGAAGCATACAA+AGG + chr1_1:17970606-17970625 None:intergenic 30.0%
CAATAGAAACTCTTACAGTT+GGG + chr1_1:17970747-17970766 None:intergenic 30.0%
TCAATAGAAACTCTTACAGT+TGG + chr1_1:17970748-17970767 None:intergenic 30.0%
AAGTGCAATTCAAATGCATT+GGG + chr1_1:17970831-17970850 None:intergenic 30.0%
GATAGAGCGCAATATATAAT+GGG + chr1_1:17970902-17970921 None:intergenic 30.0%
TGATAGAGCGCAATATATAA+TGG + chr1_1:17970903-17970922 None:intergenic 30.0%
AAATAACACTGTGTGTACAA+AGG - chr1_1:17971098-17971117 Msa0011920:intron 30.0%
! TATTTGGGATTTAAAAAGGC+CGG - chr1_1:17971203-17971222 Msa0011920:intron 30.0%
CAGATCTTTCAAGATAATTC+TGG - chr1_1:17971462-17971481 Msa0011920:intron 30.0%
!!! AACCAACCTTTTTTGTTCTT+TGG - chr1_1:17971493-17971512 Msa0011920:intron 30.0%
!!! ACCAACCTTTTTTGTTCTTT+GGG - chr1_1:17971494-17971513 Msa0011920:intron 30.0%
TTATCCCCAAAGAACAAAAA+AGG + chr1_1:17971502-17971521 None:intergenic 30.0%
! CTTTTATCATCCAATCTCAA+AGG + chr1_1:17971558-17971577 None:intergenic 30.0%
! TTTTATTGAGGCTTCCTTTT+GGG + chr1_1:17971589-17971608 None:intergenic 30.0%
!! TGTCTGAGAATGTTTTATTG+AGG + chr1_1:17971601-17971620 None:intergenic 30.0%
AATGAAGGGAATAAATTGAC+AGG + chr1_1:17971845-17971864 None:intergenic 30.0%
TCACTTTAGTGACAAATGAA+GGG + chr1_1:17971859-17971878 None:intergenic 30.0%
ATCACTTTAGTGACAAATGA+AGG + chr1_1:17971860-17971879 None:intergenic 30.0%
TTCATTTGTCACTAAAGTGA+TGG - chr1_1:17971859-17971878 Msa0011920:intron 30.0%
!! AGAAACATAAACTGACTTGA+AGG - chr1_1:17971907-17971926 Msa0011920:intron 30.0%
TAAGAGAATTGAGTAGTATC+GGG + chr1_1:17972092-17972111 None:intergenic 30.0%
! GTTTGAGAAGTATAACCAAA+TGG + chr1_1:17972123-17972142 None:intergenic 30.0%
GAGTAACTTAATCAAACACA+TGG + chr1_1:17972198-17972217 None:intergenic 30.0%
! GAGTTTTTCATTACAGTTAC+AGG - chr1_1:17972284-17972303 Msa0011920:intron 30.0%
! GGAGTATTAAAGGATATTGA+AGG + chr1_1:17972434-17972453 None:intergenic 30.0%
CTAATCCATTAGAATCTCAA+TGG + chr1_1:17973023-17973042 None:intergenic 30.0%
!! CTAATGGATTAGACATAAAC+TGG - chr1_1:17973031-17973050 Msa0011920:intron 30.0%
TTGACTGAAAAACAAATGTC+TGG - chr1_1:17973063-17973082 Msa0011920:intron 30.0%
!! AGCTTTAAACCAGAAATCAT+GGG - chr1_1:17973172-17973191 Msa0011920:intron 30.0%
ATCTTTGTTCATCTACTCTA+AGG + chr1_1:17973449-17973468 None:intergenic 30.0%
TTAGAGTAGATGAACAAAGA+TGG - chr1_1:17973448-17973467 Msa0011920:three_prime_UTR 30.0%
TGGCATAAAATCCAAATTGA+AGG - chr1_1:17973482-17973501 Msa0011920:three_prime_UTR 30.0%
! TATTTATTGACTGTTCCATC+AGG - chr1_1:17973814-17973833 Msa0011920:intron 30.0%
GTATTCATAGGATGAATACT+AGG - chr1_1:17974060-17974079 Msa0011920:intron 30.0%
! TGAGTTATAGAAGTGTGATT+AGG - chr1_1:17974282-17974301 Msa0011920:intron 30.0%
! TCTCTTGAGTGTATTTTTCT+TGG + chr1_1:17974498-17974517 None:intergenic 30.0%
ACAATCACAAGTTCCAATAT+AGG + chr1_1:17974521-17974540 None:intergenic 30.0%
TTTCAACGTGTATTCTTCAT+AGG + chr1_1:17974815-17974834 None:intergenic 30.0%
CTTGCTTAAAAAGAAATCTG+AGG + chr1_1:17974948-17974967 None:intergenic 30.0%
ATCAACAAAGGTGATGTAAT+AGG - chr1_1:17974994-17975013 Msa0011920:intron 30.0%
AACCAGTAACATATGTAAAG+GGG - chr1_1:17975020-17975039 Msa0011920:intron 30.0%
!! TCAGTGTAAACTAGTTCTAA+TGG - chr1_1:17975058-17975077 Msa0011920:intron 30.0%
GTACAATAAGTAGTTTGAGA+CGG - chr1_1:17975082-17975101 Msa0011920:intron 30.0%
AAAAAATTTCCTTTGCCACT+TGG + chr1_1:17975246-17975265 None:intergenic 30.0%
!! TTTGCTTTTGGAAGAATTGA+AGG - chr1_1:17975313-17975332 Msa0011920:intron 30.0%
! TACACTAATGAGATTTTTCG+TGG - chr1_1:17975531-17975550 Msa0011920:intron 30.0%
GACAGAACAAATCGAAATTT+AGG - chr1_1:17975577-17975596 Msa0011920:intron 30.0%
! ATCAGATCTATATTGGTAAC+GGG + chr1_1:17975657-17975676 None:intergenic 30.0%
GATCAGATCTATATTGGTAA+CGG + chr1_1:17975658-17975677 None:intergenic 30.0%
TTACCAATATAGATCTGATC+TGG - chr1_1:17975658-17975677 Msa0011920:intron 30.0%
ACTATAAGTTACATGATACG+AGG - chr1_1:17975717-17975736 Msa0011920:intron 30.0%
!! TCTAAACATTTTGATGGTTC+TGG + chr1_1:17976219-17976238 None:intergenic 30.0%
TTCAGATTCAGAATTAACAG+AGG - chr1_1:17976251-17976270 Msa0011920:intron 30.0%
ATTCAAAACTCTTGAAGATG+CGG + chr1_1:17976327-17976346 None:intergenic 30.0%
!!! TCAAGAGTTTTGAATTTCAC+TGG - chr1_1:17976332-17976351 Msa0011920:three_prime_UTR 30.0%
! GAGTTTTTCATTACAGTTAC+AGG - chr1_1:17972284-17972303 Msa0011920:intron 30.0%
GATATATAGTGATGTAACAC+TGG + chr1_1:17976777-17976796 None:intergenic 30.0%
TGATATCCTATACATCTGAT+AGG + chr1_1:17976869-17976888 None:intergenic 30.0%
ATGTATAGGATATCATAACC+AGG - chr1_1:17976874-17976893 Msa0011920:intron 30.0%
AAAAATCCAATTGAAAAGCC+TGG + chr1_1:17976895-17976914 None:intergenic 30.0%
TATTCAAGATATGATGTTGC+AGG - chr1_1:17977209-17977228 Msa0011920:intron 30.0%
ATTCAAGATATGATGTTGCA+GGG - chr1_1:17977210-17977229 Msa0011920:intron 30.0%
AATGACGATTGAAATTTCTC+CGG + chr1_1:17977244-17977263 None:intergenic 30.0%
AAGAGGAAGATTTAACAGTA+AGG - chr1_1:17977353-17977372 Msa0011920:intron 30.0%
GTCTTCAACCAAAAACTAAA+TGG + chr1_1:17977487-17977506 None:intergenic 30.0%
GAAGCTTAGTATTGTTGTAT+AGG - chr1_1:17977527-17977546 Msa0011920:intron 30.0%
CAATAGAGAGTTGAATAATC+AGG + chr1_1:17977566-17977585 None:intergenic 30.0%
TCTATTGACGTTCTTCAATT+GGG - chr1_1:17977579-17977598 Msa0011920:intron 30.0%
AAAAAATGCTTTGGCTATAC+TGG - chr1_1:17977787-17977806 Msa0011920:intron 30.0%
AGGTTTACAATTGATCATTC+CGG + chr1_1:17977819-17977838 None:intergenic 30.0%
TATCTACCAAGGTATGAATA+AGG + chr1_1:17977856-17977875 None:intergenic 30.0%
ATACCTTGGTAGATATAGTT+AGG - chr1_1:17977861-17977880 Msa0011920:intron 30.0%
TAGTAGAGTCAATGCAATTT+AGG - chr1_1:17978162-17978181 Msa0011920:intron 30.0%
AATGATAGTTGAAGTCTTGA+AGG - chr1_1:17978212-17978231 Msa0011920:intron 30.0%
ATGATAGTTGAAGTCTTGAA+GGG - chr1_1:17978213-17978232 Msa0011920:intron 30.0%
AAGGATGTATCCTTTATGAA+GGG + chr1_1:17978341-17978360 None:intergenic 30.0%
AAAGGATGTATCCTTTATGA+AGG + chr1_1:17978342-17978361 None:intergenic 30.0%
ATAGCCAAAATAAGGATAGA+GGG + chr1_1:17978396-17978415 None:intergenic 30.0%
AATAGCCAAAATAAGGATAG+AGG + chr1_1:17978397-17978416 None:intergenic 30.0%
! AATAAGAAACATCCTTTTGC+AGG + chr1_1:17978532-17978551 None:intergenic 30.0%
! TAAATCTTCAATTTCGAGTC+TGG - chr1_1:17978648-17978667 Msa0011920:intron 30.0%
CATATAATCATCAGTCTTTG+AGG + chr1_1:17978695-17978714 None:intergenic 30.0%
CTCAAAGACTGATGATTATA+TGG - chr1_1:17978693-17978712 Msa0011920:intron 30.0%
TTTGCATTAGAATGATGAAC+GGG + chr1_1:17978814-17978833 None:intergenic 30.0%
CAAAATCAGCTTATAAAGTG+AGG + chr1_1:17978963-17978982 None:intergenic 30.0%
!! CACTTTATAAGCTGATTTTG+TGG - chr1_1:17978963-17978982 Msa0011920:intron 30.0%
!! CTTTATAAGCTGATTTTGTG+GGG - chr1_1:17978965-17978984 Msa0011920:intron 30.0%
! TCTAGGATAGACTTAGAATT+TGG + chr1_1:17979009-17979028 None:intergenic 30.0%
! TAGTATGGACTAATGTATGT+GGG + chr1_1:17979117-17979136 None:intergenic 30.0%
!! ACCTTATAAGCCAGTTTTAT+GGG - chr1_1:17979176-17979195 Msa0011920:three_prime_UTR 30.0%
!! CATCTGTCCAAATTTTAAGA+TGG - chr1_1:17979211-17979230 Msa0011920:three_prime_UTR 30.0%
!! TTTAAGATGGTTTGATTTGG+TGG - chr1_1:17979224-17979243 Msa0011920:three_prime_UTR 30.0%
! TAGTCTTAGAAATTACATGG+GGG - chr1_1:17979262-17979281 Msa0011920:intron 30.0%
TTACTAGATGTAATGACTCA+TGG - chr1_1:17979303-17979322 Msa0011920:intron 30.0%
TACTAGATGTAATGACTCAT+GGG - chr1_1:17979304-17979323 Msa0011920:intron 30.0%
! ATGTTGGATCTGAAACTTTA+CGG - chr1_1:17979340-17979359 Msa0011920:intron 30.0%
AAGAGACACTTAAAAAGGAA+CGG + chr1_1:17979426-17979445 None:intergenic 30.0%
!!! TCCTTTTTAAGTGTCTCTTT+TGG - chr1_1:17979427-17979446 Msa0011920:intron 30.0%
TCCAAAAGAGACACTTAAAA+AGG + chr1_1:17979431-17979450 None:intergenic 30.0%
TCTCCGCAATAAATAACTAA+GGG + chr1_1:17979526-17979545 None:intergenic 30.0%
TTGTAGCTATCTAATCTCAA+AGG + chr1_1:17979769-17979788 None:intergenic 30.0%
!! CTACATCTTAGAGTTTTGAT+TGG - chr1_1:17979935-17979954 Msa0011920:intron 30.0%
!! CTTATAAACCGGTTTTGTAA+GGG + chr1_1:17979972-17979991 None:intergenic 30.0%
! TTCTACATCAGTTACTTTGT+TGG - chr1_1:17980206-17980225 Msa0011920:three_prime_UTR 30.0%
! TTTGTGGTTATCGTTTTACA+AGG - chr1_1:17980324-17980343 Msa0011920:CDS 30.0%
! ATTTTTATCTGCACTGTCAT+TGG - chr1_1:17980531-17980550 Msa0011920:CDS 30.0%
TATATGTTATATGTACCACC+AGG - chr1_1:17980731-17980750 Msa0011920:CDS 30.0%
ATATGTTATATGTACCACCA+GGG - chr1_1:17980732-17980751 Msa0011920:CDS 30.0%
ATATTAAAGCTCTGTTCAGT+TGG - chr1_1:17980888-17980907 Msa0011920:intron 30.0%
! TGTATCACATCACATCTTTT+TGG - chr1_1:17980958-17980977 Msa0011920:intron 30.0%
CACCTATTATATTAGGGATT+GGG + chr1_1:17981073-17981092 None:intergenic 30.0%
ACACCTATTATATTAGGGAT+TGG + chr1_1:17981074-17981093 None:intergenic 30.0%
CATCACACACCTATTATATT+AGG + chr1_1:17981080-17981099 None:intergenic 30.0%
ATCATACTCTGTCAATCATT+TGG - chr1_1:17981128-17981147 Msa0011920:intron 30.0%
AATAAACCACAATTGTATCC+TGG + chr1_1:17981386-17981405 None:intergenic 30.0%
GAAGAAAAAGAAGAAACGTT+AGG - chr1_1:17981425-17981444 Msa0011920:intron 30.0%
ACCAATTTCAATTACTTGAG+TGG + chr1_1:17981486-17981505 None:intergenic 30.0%
AATATGGACCTATTATTACG+TGG - chr1_1:17981698-17981717 Msa0011920:intron 30.0%
GATTATTAACTGGGTAACTA+TGG + chr1_1:17981855-17981874 None:intergenic 30.0%
TGTATACTAACGATACGATT+AGG - chr1_1:17981910-17981929 Msa0011920:intron 30.0%
!!! CTCTGACCACTATTTTTATT+GGG - chr1_1:17981995-17982014 Msa0011920:CDS 30.0%
CACAATCCCAATAAAAATAG+TGG + chr1_1:17982004-17982023 None:intergenic 30.0%
TTAACAGCAGCATAAAATGT+TGG + chr1_1:17982247-17982266 None:intergenic 30.0%
CATAAACTAGTACAATGAGA+TGG + chr1_1:17982381-17982400 None:intergenic 30.0%
CAAAATTATCGCAATGAACA+AGG + chr1_1:17982646-17982665 None:intergenic 30.0%
ACTTATAAACATCAGCCTAA+AGG + chr1_1:17982720-17982739 None:intergenic 30.0%
!! GTTTATAAGTTGATCGAACA+AGG - chr1_1:17982730-17982749 Msa0011920:CDS 30.0%
AAAGACTGAAGAATCACTTC+AGG + chr1_1:17961728-17961747 None:intergenic 35.0%
AGAACTGTTATACTCTTCCA+AGG - chr1_1:17961773-17961792 Msa0011920:three_prime_UTR 35.0%
TTGAATAACCAGTCTTTCCT+TGG + chr1_1:17961793-17961812 None:intergenic 35.0%
!! ACCTCATTTTAGTGCAGAAA+GGG + chr1_1:17961817-17961836 None:intergenic 35.0%
!! TACCTCATTTTAGTGCAGAA+AGG + chr1_1:17961818-17961837 None:intergenic 35.0%
! TTTTCGCGCTAGTGATAATT+AGG + chr1_1:17961877-17961896 None:intergenic 35.0%
AATTATCACTAGCGCGAAAA+CGG - chr1_1:17961877-17961896 Msa0011920:three_prime_UTR 35.0%
! TAAGTTCCTTTTGAACCTCA+TGG - chr1_1:17962000-17962019 Msa0011920:three_prime_UTR 35.0%
! AAGTTCCTTTTGAACCTCAT+GGG - chr1_1:17962001-17962020 Msa0011920:three_prime_UTR 35.0%
CAGAAATTGTTAGAACCAGA+GGG + chr1_1:17962089-17962108 None:intergenic 35.0%
ACAGAAATTGTTAGAACCAG+AGG + chr1_1:17962090-17962109 None:intergenic 35.0%
TGTGAGGATGGTGAAAATTA+AGG - chr1_1:17962434-17962453 Msa0011920:intron 35.0%
GCATAAATTTACAGACCAGA+AGG - chr1_1:17962550-17962569 Msa0011920:intron 35.0%
AGGATAGGATTAAATGACAG+TGG - chr1_1:17962790-17962809 Msa0011920:three_prime_UTR 35.0%
TTAAGCAAGTGTTCGAAGTT+TGG + chr1_1:17962927-17962946 None:intergenic 35.0%
CAAAAGGAAAATGTCGTCTA+AGG + chr1_1:17962955-17962974 None:intergenic 35.0%
AGAATACTTACTCACAAACC+AGG + chr1_1:17963192-17963211 None:intergenic 35.0%
!! GTAAGTATTCTAGCTTAGAC+CGG - chr1_1:17963201-17963220 Msa0011920:three_prime_UTR 35.0%
!! TAAGTATTCTAGCTTAGACC+GGG - chr1_1:17963202-17963221 Msa0011920:three_prime_UTR 35.0%
ACAGCTCCTTACTATTGTAT+TGG + chr1_1:17963278-17963297 None:intergenic 35.0%
ATTGAGATTGTGATGTATGG+AGG - chr1_1:17963380-17963399 Msa0011920:intron 35.0%
GTGATGTATGGAGGAATTTA+TGG - chr1_1:17963389-17963408 Msa0011920:intron 35.0%
ATGTATGGAGGAATTTATGG+TGG - chr1_1:17963392-17963411 Msa0011920:intron 35.0%
TGTATGGAGGAATTTATGGT+GGG - chr1_1:17963393-17963412 Msa0011920:intron 35.0%
CATAACATCCCTGATCTAAT+TGG - chr1_1:17963708-17963727 Msa0011920:intron 35.0%
ATCCCTGATCTAATTGGAAA+TGG - chr1_1:17963714-17963733 Msa0011920:intron 35.0%
CTTCCATTTCCAATTAGATC+AGG + chr1_1:17963720-17963739 None:intergenic 35.0%
TGGAAATATCCTACACATCA+AGG + chr1_1:17963799-17963818 None:intergenic 35.0%
GAAGGATTGACATACAAAGA+AGG + chr1_1:17963978-17963997 None:intergenic 35.0%
GGTGAAGATGTTAAACTAGA+AGG + chr1_1:17963996-17964015 None:intergenic 35.0%
! GACATTGATTGAGGTGTTAA+AGG + chr1_1:17964047-17964066 None:intergenic 35.0%
GGAAGATTCTCAAAAGAAAG+TGG - chr1_1:17964103-17964122 Msa0011920:intron 35.0%
ACTACATGTATTCCAAAAGG+CGG + chr1_1:17964265-17964284 None:intergenic 35.0%
CGTAAAGAATCGGATTAATG+TGG + chr1_1:17964327-17964346 None:intergenic 35.0%
CGTAACTACACGTAAAGAAT+CGG + chr1_1:17964337-17964356 None:intergenic 35.0%
CGATTCTTTACGTGTAGTTA+CGG - chr1_1:17964335-17964354 Msa0011920:intron 35.0%
TAGCATATGATCGTGGAAAA+TGG + chr1_1:17964372-17964391 None:intergenic 35.0%
TGTAGATTAGCATATGATCG+TGG + chr1_1:17964379-17964398 None:intergenic 35.0%
! TTGGAGAAGTCTTATCTTCA+AGG - chr1_1:17964443-17964462 Msa0011920:intron 35.0%
CTGGTTAACAAATGATACAC+AGG + chr1_1:17964476-17964495 None:intergenic 35.0%
TTCATTGCATTGCAAAGGTT+GGG + chr1_1:17964625-17964644 None:intergenic 35.0%
TTTCATTGCATTGCAAAGGT+TGG + chr1_1:17964626-17964645 None:intergenic 35.0%
ACAGTTTCATTGCATTGCAA+AGG + chr1_1:17964630-17964649 None:intergenic 35.0%
! TGTTCCCACTTTGAAAGATA+AGG - chr1_1:17964740-17964759 Msa0011920:intron 35.0%
GACATCCTTATCTTTCAAAG+TGG + chr1_1:17964748-17964767 None:intergenic 35.0%
TCGAGAGGGAAATAACTTAA+TGG + chr1_1:17964835-17964854 None:intergenic 35.0%
! ATTAAGTTATTTCCCTCTCG+AGG - chr1_1:17964834-17964853 Msa0011920:intron 35.0%
ATAAGCCACTTATGTAGAAC+AGG + chr1_1:17964860-17964879 None:intergenic 35.0%
! ATGAAAACAATGGGTTTGAG+AGG + chr1_1:17964894-17964913 None:intergenic 35.0%
! ACCTAACAGCATAAGCTTTT+TGG - chr1_1:17964962-17964981 Msa0011920:intron 35.0%
TCCAAAAAGCTTATGCTGTT+AGG + chr1_1:17964966-17964985 None:intergenic 35.0%
TAGTTGCTTCATGACATCAT+AGG - chr1_1:17965158-17965177 Msa0011920:intron 35.0%
AGTTGCTTCATGACATCATA+GGG - chr1_1:17965159-17965178 Msa0011920:intron 35.0%
AAACTTTGTATTTCCGTTGC+AGG - chr1_1:17965262-17965281 Msa0011920:intron 35.0%
AACTTTGTATTTCCGTTGCA+GGG - chr1_1:17965263-17965282 Msa0011920:intron 35.0%
TCATTACTTGAGGTGATTGT+TGG - chr1_1:17965309-17965328 Msa0011920:intron 35.0%
!!! CTTTGTTTTCCCAACTTTGT+CGG + chr1_1:17965376-17965395 None:intergenic 35.0%
! CATTTGAAGAGATTTTTCCG+TGG - chr1_1:17965408-17965427 Msa0011920:intron 35.0%
TAAAAGTAAAACGTGTGCCA+CGG + chr1_1:17965428-17965447 None:intergenic 35.0%
!! GGCACACGTTTTACTTTTAA+AGG - chr1_1:17965429-17965448 Msa0011920:intron 35.0%
!! TACAGCAGAAAAATGGGTTA+GGG + chr1_1:17965541-17965560 None:intergenic 35.0%
TTGCAGTACAGCAGAAAAAT+GGG + chr1_1:17965547-17965566 None:intergenic 35.0%
!! GAGTATTGAAGGCAAATGAT+AGG - chr1_1:17965622-17965641 Msa0011920:intron 35.0%
TGCATTGCATTCTTAATGTG+AGG - chr1_1:17965680-17965699 Msa0011920:intron 35.0%
CCCCAAATAAAATACTTGCT+TGG - chr1_1:17965731-17965750 Msa0011920:intron 35.0%
! CCCCAAGCAAGTATTTTATT+TGG + chr1_1:17965736-17965755 None:intergenic 35.0%
!! TGAGCTAGACTTTTGAGTAA+TGG - chr1_1:17965815-17965834 Msa0011920:three_prime_UTR 35.0%
TTCAGTATCCTTCGGTATAT+TGG - chr1_1:17965847-17965866 Msa0011920:three_prime_UTR 35.0%
ATTGGCTGTTGAATTGTACA+CGG - chr1_1:17965865-17965884 Msa0011920:three_prime_UTR 35.0%
TGTCTGAAAACCCATGTTTA+AGG - chr1_1:17965903-17965922 Msa0011920:intron 35.0%
GTCTGAAAACCCATGTTTAA+GGG - chr1_1:17965904-17965923 Msa0011920:intron 35.0%
!! TTTTAAAGAGGAGAAGGTTG+GGG - chr1_1:17965944-17965963 Msa0011920:intron 35.0%
GAGAGAAACTGAAGCTATTA+GGG + chr1_1:17966420-17966439 None:intergenic 35.0%
AGAGAGAAACTGAAGCTATT+AGG + chr1_1:17966421-17966440 None:intergenic 35.0%
! ACCGCTATTTCATAACTGTT+AGG + chr1_1:17966756-17966775 None:intergenic 35.0%
! TATCCCGCTATAGCATTTTT+GGG - chr1_1:17966791-17966810 Msa0011920:intron 35.0%
!! TAGTAGTTAATAGCGGATAG+CGG + chr1_1:17966832-17966851 None:intergenic 35.0%
TCAAAAATTGTATTGGGGGA+GGG + chr1_1:17966884-17966903 None:intergenic 35.0%
GGGGAACTCAAAAATTGTAT+TGG + chr1_1:17966891-17966910 None:intergenic 35.0%
AAAAAAATCCCCCTCATTTG+GGG + chr1_1:17966911-17966930 None:intergenic 35.0%
GAAATAGAAGACATTGGGAA+TGG + chr1_1:17966972-17966991 None:intergenic 35.0%
GTGGAAGAAATAGAAGACAT+TGG + chr1_1:17966978-17966997 None:intergenic 35.0%
!! TTTGCACTTAGGCTTTGTTT+GGG + chr1_1:17967050-17967069 None:intergenic 35.0%
!!! TTTTGCACTTAGGCTTTGTT+TGG + chr1_1:17967051-17967070 None:intergenic 35.0%
GTGTTTAATGGAAGACTTTC+GGG - chr1_1:17967192-17967211 Msa0011920:three_prime_UTR 35.0%
AACTTTGTGGGGTTAAATTC+GGG + chr1_1:17967381-17967400 None:intergenic 35.0%
CCGTTGCTGAAAATCATTTA+AGG + chr1_1:17967561-17967580 None:intergenic 35.0%
GGATTTCGTCCCAAAATTAA+CGG - chr1_1:17967745-17967764 Msa0011920:intron 35.0%
GATTTCGTCCCAAAATTAAC+GGG - chr1_1:17967746-17967765 Msa0011920:intron 35.0%
! GTACCTTACCCGTTAATTTT+GGG + chr1_1:17967757-17967776 None:intergenic 35.0%
! AGTACCTTACCCGTTAATTT+TGG + chr1_1:17967758-17967777 None:intergenic 35.0%
ATAAGATGAGGGGGAAAAAA+AGG + chr1_1:17968023-17968042 None:intergenic 35.0%
ATCTCGTAGTGATCTTTAGT+AGG + chr1_1:17968125-17968144 None:intergenic 35.0%
TTGTATCTACCCTTCAAAAG+GGG - chr1_1:17968214-17968233 Msa0011920:intron 35.0%
ATGGAAAGAATTCCCAAAAC+TGG - chr1_1:17968370-17968389 Msa0011920:intron 35.0%
TGGAAAGAATTCCCAAAACT+GGG - chr1_1:17968371-17968390 Msa0011920:intron 35.0%
! ATTCATTTCTGCCCAGTTTT+GGG + chr1_1:17968385-17968404 None:intergenic 35.0%
! TATTCATTTCTGCCCAGTTT+TGG + chr1_1:17968386-17968405 None:intergenic 35.0%
TAGAAAATGCTCTCTAGTGA+GGG + chr1_1:17968591-17968610 None:intergenic 35.0%
ATAGATCGTTCCTAACTGTT+AGG + chr1_1:17968782-17968801 None:intergenic 35.0%
!! TTTATCAAGCCAGTTTTGTC+AGG - chr1_1:17969069-17969088 Msa0011920:intron 35.0%
GTATTAGGAGACTAAGAGAT+TGG - chr1_1:17969180-17969199 Msa0011920:intron 35.0%
!! AGATTGGTTCTCCTAGTTTT+TGG - chr1_1:17969196-17969215 Msa0011920:intron 35.0%
TGTATGTTATGCTAGTACTG+TGG - chr1_1:17969229-17969248 Msa0011920:intron 35.0%
TATGACCATGCCATAAAAGA+AGG - chr1_1:17969655-17969674 Msa0011920:intron 35.0%
CACTCTTTCTACATATGCAA+TGG - chr1_1:17970111-17970130 Msa0011920:intron 35.0%
TTAAAGTATGCAGAAGCAGA+TGG + chr1_1:17970193-17970212 None:intergenic 35.0%
TCAGCTTCACTAATATCCTT+TGG + chr1_1:17970272-17970291 None:intergenic 35.0%
TTACTAATGGCCATTGTTCT+TGG - chr1_1:17970488-17970507 Msa0011920:intron 35.0%
! ATGCTTCAGTTCTTTTTGCT+TGG - chr1_1:17970610-17970629 Msa0011920:intron 35.0%
! CTTTTTGCTTGGTCAATGTT+TGG - chr1_1:17970621-17970640 Msa0011920:intron 35.0%
GCTCAATTGCATGTAAGTTT+AGG + chr1_1:17970780-17970799 None:intergenic 35.0%
GAAGTGCAATTCAAATGCAT+TGG + chr1_1:17970832-17970851 None:intergenic 35.0%
ATGCATTTGAATTGCACTTC+TGG - chr1_1:17970832-17970851 Msa0011920:intron 35.0%
!! GCAATATATAATGGGCGAAA+AGG + chr1_1:17970894-17970913 None:intergenic 35.0%
! TCTACTGTCTTTTGTCAGTT+AGG - chr1_1:17970997-17971016 Msa0011920:intron 35.0%
CAATTATTCCAAATGCTCGA+AGG - chr1_1:17971021-17971040 Msa0011920:intron 35.0%
TCTTGGTACACAAGTAGAAA+AGG - chr1_1:17971044-17971063 Msa0011920:intron 35.0%
GTACACAAGTAGAAAAGGAT+GGG - chr1_1:17971049-17971068 Msa0011920:intron 35.0%
!!! GTACACACAGTGTTATTTTC+TGG + chr1_1:17971096-17971115 None:intergenic 35.0%
ATCCGTATTTACATGCTTGA+GGG + chr1_1:17971377-17971396 None:intergenic 35.0%
AATCCGTATTTACATGCTTG+AGG + chr1_1:17971378-17971397 None:intergenic 35.0%
AAGATCTGATGTTTAGACCT+GGG + chr1_1:17971450-17971469 None:intergenic 35.0%
AAAGATCTGATGTTTAGACC+TGG + chr1_1:17971451-17971470 None:intergenic 35.0%
!!! CCAACCTTTTTTGTTCTTTG+GGG - chr1_1:17971495-17971514 Msa0011920:intron 35.0%
!! GTAGAAAGTTCCTTTGAGAT+TGG - chr1_1:17971545-17971564 Msa0011920:intron 35.0%
!! GTTTTATTGAGGCTTCCTTT+TGG + chr1_1:17971590-17971609 None:intergenic 35.0%
TGTTATCTTGTGACACTTTC+AGG - chr1_1:17971715-17971734 Msa0011920:intron 35.0%
GTTATCTTGTGACACTTTCA+GGG - chr1_1:17971716-17971735 Msa0011920:intron 35.0%
CTTGCATGCATTGAAGTTAT+TGG - chr1_1:17971773-17971792 Msa0011920:intron 35.0%
ACAGATAATTGACAATGGAG+TGG - chr1_1:17971980-17971999 Msa0011920:intron 35.0%
GAAGTATAACCAAATGGGAA+AGG + chr1_1:17972117-17972136 None:intergenic 35.0%
AATCAAACACATGGCAGTAT+AGG + chr1_1:17972189-17972208 None:intergenic 35.0%
ACACAAAGAAAAGCTAGAAG+AGG + chr1_1:17972239-17972258 None:intergenic 35.0%
TTCATTACAGTTACAGGAAG+AGG - chr1_1:17972290-17972309 Msa0011920:intron 35.0%
! TGGAGACAAAAAGCTTCTTT+TGG - chr1_1:17972570-17972589 Msa0011920:intron 35.0%
!!! CTTATTTTGTGTGTGCGAAA+AGG + chr1_1:17972600-17972619 None:intergenic 35.0%
CATGTTATCACAAGAACCTT+AGG - chr1_1:17972682-17972701 Msa0011920:intron 35.0%
TAGATCCGGACTTAATTTCA+TGG + chr1_1:17972837-17972856 None:intergenic 35.0%
TGCATGTGTATTCTTAGATC+CGG + chr1_1:17972851-17972870 None:intergenic 35.0%
!!! CGTATTTTGAGGCATCTTAA+GGG + chr1_1:17972988-17973007 None:intergenic 35.0%
!!! ACGTATTTTGAGGCATCTTA+AGG + chr1_1:17972989-17973008 None:intergenic 35.0%
TCCAATACGCAGTAATTACT+CGG + chr1_1:17973089-17973108 None:intergenic 35.0%
AGTAATTACTGCGTATTGGA+GGG - chr1_1:17973089-17973108 Msa0011920:intron 35.0%
!! CAGCTTTAAACCAGAAATCA+TGG - chr1_1:17973171-17973190 Msa0011920:intron 35.0%
TACACCTTTACTTCAACAGT+TGG + chr1_1:17973368-17973387 None:intergenic 35.0%
CAAACTACTCTCCTTCAATT+TGG + chr1_1:17973496-17973515 None:intergenic 35.0%
GTAAACAATGCCTTTCTCAA+TGG + chr1_1:17973649-17973668 None:intergenic 35.0%
! AGGCTTTATAACATGACTGA+TGG - chr1_1:17973732-17973751 Msa0011920:intron 35.0%
AGTCATCACCATATCTTTGA+TGG - chr1_1:17973764-17973783 Msa0011920:intron 35.0%
AAAGGCTTCCATCAAAGATA+TGG + chr1_1:17973775-17973794 None:intergenic 35.0%
TAAATATAAGGCACGTCTTG+TGG + chr1_1:17973800-17973819 None:intergenic 35.0%
AAATACCCATTTGCATCCAA+CGG - chr1_1:17973852-17973871 Msa0011920:intron 35.0%
!! TAAGGCTTGTTTAGTGGTTT+TGG - chr1_1:17973972-17973991 Msa0011920:intron 35.0%
!! AAGGCTTGTTTAGTGGTTTT+GGG - chr1_1:17973973-17973992 Msa0011920:intron 35.0%
AAGAGAGTTGGATGAAGTAT+GGG - chr1_1:17974012-17974031 Msa0011920:intron 35.0%
ATAGGATGAATACTAGGTAG+AGG - chr1_1:17974066-17974085 Msa0011920:intron 35.0%
!! TATGCTGGAATAGGTTTTGT+TGG - chr1_1:17974099-17974118 Msa0011920:intron 35.0%
!!! ATGCTGGAATAGGTTTTGTT+GGG - chr1_1:17974100-17974119 Msa0011920:intron 35.0%
!! AGTTTGGTGTGTTGTTAATG+TGG - chr1_1:17974214-17974233 Msa0011920:three_prime_UTR 35.0%
!! GTTTGGTGTGTTGTTAATGT+GGG - chr1_1:17974215-17974234 Msa0011920:three_prime_UTR 35.0%
GAAATCAGCTTCACAATCAA+CGG + chr1_1:17974364-17974383 None:intergenic 35.0%
! TTCATTGAAAAGCACATCCT+TGG - chr1_1:17974407-17974426 Msa0011920:intron 35.0%
TATAAGTGCTTATCATCGGA+AGG + chr1_1:17974447-17974466 None:intergenic 35.0%
TACACTCAAGAGACCTATAT+TGG - chr1_1:17974505-17974524 Msa0011920:intron 35.0%
TGGAACTTGTGATTGTTGTA+TGG - chr1_1:17974525-17974544 Msa0011920:intron 35.0%
!! GTTCTGAGAAAATTGTAGTC+AGG - chr1_1:17974579-17974598 Msa0011920:intron 35.0%
! GTACCATACGCTAAACTTTT+TGG + chr1_1:17974612-17974631 None:intergenic 35.0%
! GTAAAAGCATAATCCCAGTA+TGG - chr1_1:17974684-17974703 Msa0011920:intron 35.0%
TTCATTACCTTTGCCATACT+GGG + chr1_1:17974700-17974719 None:intergenic 35.0%
TGAGTACCATATCCACTATT+TGG - chr1_1:17974736-17974755 Msa0011920:intron 35.0%
TAAAGCTGTGCAATCTGATT+GGG + chr1_1:17974869-17974888 None:intergenic 35.0%
ATAAAGCTGTGCAATCTGAT+TGG + chr1_1:17974870-17974889 None:intergenic 35.0%
ATGCATTTACTAGGTTCTCA+TGG + chr1_1:17974976-17974995 None:intergenic 35.0%
CCTTTGTTGATGCATTTACT+AGG + chr1_1:17974985-17975004 None:intergenic 35.0%
CCTAGTAAATGCATCAACAA+AGG - chr1_1:17974982-17975001 Msa0011920:intron 35.0%
ACCAGTAACATATGTAAAGG+GGG - chr1_1:17975021-17975040 Msa0011920:intron 35.0%
! ACTAGTTTACACTGATCTGT+GGG + chr1_1:17975053-17975072 None:intergenic 35.0%
! AACTAGTTTACACTGATCTG+TGG + chr1_1:17975054-17975073 None:intergenic 35.0%
ATACGTTGAACATCACTACT+TGG - chr1_1:17975202-17975221 Msa0011920:intron 35.0%
! TTCTTGCTATGTGAAATCTC+AGG + chr1_1:17975464-17975483 None:intergenic 35.0%
AAAAAATTGAGAGGAACCAG+AGG - chr1_1:17975612-17975631 Msa0011920:intron 35.0%
GGTAGTCTGATGAATATTCT+GGG - chr1_1:17975693-17975712 Msa0011920:intron 35.0%
!! ATTCTGCTAGCTCTGTTAAT+TGG + chr1_1:17975759-17975778 None:intergenic 35.0%
TACAATGTCGAGTTTGTCAA+AGG + chr1_1:17976131-17976150 None:intergenic 35.0%
AGATTCAGAATTAACAGAGG+TGG - chr1_1:17976254-17976273 Msa0011920:intron 35.0%
TTCCCATGTATCAAAGTCAT+CGG - chr1_1:17976286-17976305 Msa0011920:three_prime_UTR 35.0%
TTCCGATGACTTTGATACAT+GGG + chr1_1:17976291-17976310 None:intergenic 35.0%
TTTCCGATGACTTTGATACA+TGG + chr1_1:17976292-17976311 None:intergenic 35.0%
!! TTTCTCTGAGATTGCAGAAA+AGG - chr1_1:17976448-17976467 Msa0011920:intron 35.0%
TTCATTACAGTTACAGGTAG+AGG - chr1_1:17976670-17976689 Msa0011920:intron 35.0%
TAGACAAAGATAAAGACCTC+TGG - chr1_1:17972326-17972345 Msa0011920:intron 35.0%
! TCATAACCAGGCTTTTCAAT+TGG - chr1_1:17976886-17976905 Msa0011920:intron 35.0%
GATACTCGTGTCTAACTATT+AGG - chr1_1:17976958-17976977 Msa0011920:intron 35.0%
CAAGCAAGTGTTTATAATGC+TGG + chr1_1:17977018-17977037 None:intergenic 35.0%
GGGTGCAAGAAAAGATTAAT+TGG + chr1_1:17977170-17977189 None:intergenic 35.0%
GGAGAAATTTCAATCGTCAT+TGG - chr1_1:17977243-17977262 Msa0011920:intron 35.0%
AGGAAGATTTAACAGTAAGG+TGG - chr1_1:17977356-17977375 Msa0011920:intron 35.0%
TGGTTCATTTCTCTTTGTCT+AGG - chr1_1:17977376-17977395 Msa0011920:intron 35.0%
AAATTTAGTGGCACAACACT+TGG + chr1_1:17977453-17977472 None:intergenic 35.0%
! AAGTGTTGTGCCACTAAATT+TGG - chr1_1:17977452-17977471 Msa0011920:intron 35.0%
!!! CAGCTATGCCATTTAGTTTT+TGG - chr1_1:17977476-17977495 Msa0011920:intron 35.0%
TTGTTGTATAGGAATTCGGT+AGG - chr1_1:17977538-17977557 Msa0011920:intron 35.0%
CTCTATTGACGTTCTTCAAT+TGG - chr1_1:17977578-17977597 Msa0011920:intron 35.0%
AGTCTTGGATCTGAAGAAAA+TGG + chr1_1:17977696-17977715 None:intergenic 35.0%
! TTTTCTTCAGATCCAAGACT+AGG - chr1_1:17977696-17977715 Msa0011920:intron 35.0%
TTTCTTCAGATCCAAGACTA+GGG - chr1_1:17977697-17977716 Msa0011920:intron 35.0%
ATTGTAAACCTGTCAACACT+CGG - chr1_1:17977828-17977847 Msa0011920:intron 35.0%
TCACCTAACTATATCTACCA+AGG + chr1_1:17977867-17977886 None:intergenic 35.0%
AACTATCTTGTAGTGAATGC+TGG - chr1_1:17977894-17977913 Msa0011920:intron 35.0%
AATTCAAATGATCAATCGCC+AGG - chr1_1:17977976-17977995 Msa0011920:intron 35.0%
TCTGCAACAAGTAGATAGTT+TGG - chr1_1:17978040-17978059 Msa0011920:intron 35.0%
GAAATGAATATGCAACAAGC+TGG - chr1_1:17978235-17978254 Msa0011920:intron 35.0%
!!! CTGGATAGTTTTGATTTCTG+TGG - chr1_1:17978254-17978273 Msa0011920:intron 35.0%
AGAATATTGAGTCCTGCAAA+AGG - chr1_1:17978517-17978536 Msa0011920:intron 35.0%
ACCATATAAAGCAAGTGCAA+GGG + chr1_1:17978761-17978780 None:intergenic 35.0%
! GTAGTATGGACTAATGTATG+TGG + chr1_1:17979118-17979137 None:intergenic 35.0%
! TAAAACTGGCTTATAAGGTG+AGG + chr1_1:17979175-17979194 None:intergenic 35.0%
! CACCTTATAAGCCAGTTTTA+TGG - chr1_1:17979175-17979194 Msa0011920:three_prime_UTR 35.0%
! TCCCATAAAACTGGCTTATA+AGG + chr1_1:17979180-17979199 None:intergenic 35.0%
CTAACTTCATCCCATAAAAC+TGG + chr1_1:17979189-17979208 None:intergenic 35.0%
!! CAGTTTTATGGGATGAAGTT+AGG - chr1_1:17979187-17979206 Msa0011920:three_prime_UTR 35.0%
ACTAGATGTAATGACTCATG+GGG - chr1_1:17979305-17979324 Msa0011920:intron 35.0%
TCAGTAGATTCCAATCTAGA+TGG - chr1_1:17979372-17979391 Msa0011920:intron 35.0%
CTCTCCGCAATAAATAACTA+AGG + chr1_1:17979527-17979546 None:intergenic 35.0%
TGAGAATTAAAACGGAACAG+AGG - chr1_1:17979665-17979684 Msa0011920:intron 35.0%
!!! TAATTTTTTGGAAACGGCAG+CGG - chr1_1:17979873-17979892 Msa0011920:intron 35.0%
!! AAACTCTAAGATGTAGAGTC+TGG + chr1_1:17979931-17979950 None:intergenic 35.0%
TAACTCAACCCTTACAAAAC+CGG - chr1_1:17979961-17979980 Msa0011920:intron 35.0%
!! CCTTATAAACCGGTTTTGTA+AGG + chr1_1:17979973-17979992 None:intergenic 35.0%
! CCTTACAAAACCGGTTTATA+AGG - chr1_1:17979970-17979989 Msa0011920:intron 35.0%
TCGATGGTATATGTTTGAAC+AGG + chr1_1:17980455-17980474 None:intergenic 35.0%
TGTTCAAACATATACCATCG+AGG - chr1_1:17980454-17980473 Msa0011920:CDS 35.0%
GTTCAAACATATACCATCGA+GGG - chr1_1:17980455-17980474 Msa0011920:CDS 35.0%
ACGCTCAATTACCAAAAAAC+TGG + chr1_1:17980568-17980587 None:intergenic 35.0%
TATTAGGGATTGGGTCAAAA+TGG + chr1_1:17981064-17981083 None:intergenic 35.0%
GACCCAATCCCTAATATAAT+AGG - chr1_1:17981068-17981087 Msa0011920:intron 35.0%
!! GCTCTGAAAGTTCGATAATT+GGG + chr1_1:17981307-17981326 None:intergenic 35.0%
!! TGCTCTGAAAGTTCGATAAT+TGG + chr1_1:17981308-17981327 None:intergenic 35.0%
ATCTCAAAGTTATCTCAGAC+CGG - chr1_1:17981357-17981376 Msa0011920:intron 35.0%
AAGAAACGTTAGGGAAGTTT+AGG - chr1_1:17981435-17981454 Msa0011920:intron 35.0%
GCCACTCAAGTAATTGAAAT+TGG - chr1_1:17981482-17981501 Msa0011920:intron 35.0%
TTAATATCATCAACTGCCAG+TGG - chr1_1:17981623-17981642 Msa0011920:intron 35.0%
TGGGTTTCATCTTGCTAATA+TGG - chr1_1:17981682-17981701 Msa0011920:intron 35.0%
AATCTGGTAATAGGAAACTC+GGG + chr1_1:17981764-17981783 None:intergenic 35.0%
CAATCTGGTAATAGGAAACT+CGG + chr1_1:17981765-17981784 None:intergenic 35.0%
CCAATAAAAATAGTGGTCAG+AGG + chr1_1:17981997-17982016 None:intergenic 35.0%
!!! CCTCTGACCACTATTTTTAT+TGG - chr1_1:17981994-17982013 Msa0011920:CDS 35.0%
TTTAAACCTCACCAATGCTT+TGG - chr1_1:17982162-17982181 Msa0011920:intron 35.0%
TTGTCCAAATTCCAAAGCAT+TGG + chr1_1:17982176-17982195 None:intergenic 35.0%
! TGTTGCTTCTACATGAAATG+TGG - chr1_1:17982318-17982337 Msa0011920:intron 35.0%
GTTGCTTCTACATGAAATGT+GGG - chr1_1:17982319-17982338 Msa0011920:intron 35.0%
TGATTGATCAAGTCTTGATG+TGG - chr1_1:17982600-17982619 Msa0011920:intron 35.0%
!! GTAGTCATGAATTAGCCTTT+AGG - chr1_1:17982702-17982721 Msa0011920:CDS 35.0%
!!! TCGAACAAGGCCATATTTTT+TGG - chr1_1:17982743-17982762 Msa0011920:CDS 35.0%
!!! ACAAGGCCATATTTTTTGGA+TGG - chr1_1:17982747-17982766 Msa0011920:CDS 35.0%
! AAGGTGCCATCCAAAAAATA+TGG + chr1_1:17982756-17982775 None:intergenic 35.0%
ATACTCTTCCAAGGAAAGAC+TGG - chr1_1:17961782-17961801 Msa0011920:three_prime_UTR 40.0%
ACCCTTTCTGCACTAAAATG+AGG - chr1_1:17961813-17961832 Msa0011920:three_prime_UTR 40.0%
GGAAGAACCCACATTGTAAA+GGG + chr1_1:17962237-17962256 None:intergenic 40.0%
AGGAAGAACCCACATTGTAA+AGG + chr1_1:17962238-17962257 None:intergenic 40.0%
GGTATAAGTGTATGTGAGGA+TGG - chr1_1:17962422-17962441 Msa0011920:intron 40.0%
GGTCTATTTCAACAACCTTC+TGG + chr1_1:17962568-17962587 None:intergenic 40.0%
GTTGTTGAAATAGACCAGCA+TGG - chr1_1:17962572-17962591 Msa0011920:intron 40.0%
CACTGTAAAGTTGCGTAAGA+AGG - chr1_1:17962604-17962623 Msa0011920:intron 40.0%
ACTGAATGGGGTCAACTATA+TGG + chr1_1:17963048-17963067 None:intergenic 40.0%
ATATAGTTGACCCCATTCAG+TGG - chr1_1:17963047-17963066 Msa0011920:three_prime_UTR 40.0%
TATAGTTGACCCCATTCAGT+GGG - chr1_1:17963048-17963067 Msa0011920:three_prime_UTR 40.0%
! AATGCCTTTTCCCACTGAAT+GGG + chr1_1:17963061-17963080 None:intergenic 40.0%
! AAATGCCTTTTCCCACTGAA+TGG + chr1_1:17963062-17963081 None:intergenic 40.0%
ACCTGCCTCTATATTAGTGT+TGG - chr1_1:17963134-17963153 Msa0011920:three_prime_UTR 40.0%
TCCAACACTAATATAGAGGC+AGG + chr1_1:17963138-17963157 None:intergenic 40.0%
!! GTTGGATTTAAGTTGTTGGG+TGG - chr1_1:17963152-17963171 Msa0011920:three_prime_UTR 40.0%
!! GTGGTTTGTTCTATTCTACC+TGG - chr1_1:17963171-17963190 Msa0011920:three_prime_UTR 40.0%
AGTAAGGAGCTGTGATTCAA+TGG - chr1_1:17963285-17963304 Msa0011920:intron 40.0%
CAGCTTATAGCAGACTGATT+TGG - chr1_1:17963345-17963364 Msa0011920:intron 40.0%
TGTGGCTGTATAACTCTTAC+AGG - chr1_1:17963416-17963435 Msa0011920:intron 40.0%
GATTGATGAAAGAATGCGGA+GGG + chr1_1:17963513-17963532 None:intergenic 40.0%
AGATTGATGAAAGAATGCGG+AGG + chr1_1:17963514-17963533 None:intergenic 40.0%
CTTGCAGGTATTTGCTCTTA+TGG - chr1_1:17963683-17963702 Msa0011920:intron 40.0%
GCACTACCCAAAGTAATTGA+TGG + chr1_1:17963819-17963838 None:intergenic 40.0%
! CTCAAGTGGGTTTGTATGAT+GGG - chr1_1:17963841-17963860 Msa0011920:intron 40.0%
! GATTGAGGTGTTAAAGGACA+AGG + chr1_1:17964041-17964060 None:intergenic 40.0%
ACATCTGTCAATTGCTTACC+TGG - chr1_1:17964173-17964192 Msa0011920:intron 40.0%
CGTTGCTTCTTAGTTAATCC+AGG + chr1_1:17964194-17964213 None:intergenic 40.0%
GTGAGCAACTAGATAACTGT+GGG - chr1_1:17964213-17964232 Msa0011920:intron 40.0%
AGATAACTGTGGGTTTCACA+CGG - chr1_1:17964223-17964242 Msa0011920:intron 40.0%
GCTAATCTACAGAATGCACA+CGG - chr1_1:17964388-17964407 Msa0011920:intron 40.0%
CTAATCTACAGAATGCACAC+GGG - chr1_1:17964389-17964408 Msa0011920:intron 40.0%
TAATCTACAGAATGCACACG+GGG - chr1_1:17964390-17964409 Msa0011920:intron 40.0%
GGGCAGTATTTGATGTTTGT+TGG - chr1_1:17964424-17964443 Msa0011920:intron 40.0%
AGTGCATATGCCAATAGAGA+AGG + chr1_1:17964517-17964536 None:intergenic 40.0%
TTCTCACTTGAATGAGGTTG+CGG - chr1_1:17964566-17964585 Msa0011920:intron 40.0%
! GGTAATATGCTTCTAGCTAC+TGG - chr1_1:17964588-17964607 Msa0011920:intron 40.0%
! ATGCTTCTAGCTACTGGATT+TGG - chr1_1:17964594-17964613 Msa0011920:intron 40.0%
GTTGTCACTGCTGCATTATA+TGG - chr1_1:17964648-17964667 Msa0011920:intron 40.0%
TGACAAATATATGTCGGGCA+GGG + chr1_1:17964770-17964789 None:intergenic 40.0%
ATGACAAATATATGTCGGGC+AGG + chr1_1:17964771-17964790 None:intergenic 40.0%
TATAGGGAAAGTCACGTGAA+TGG + chr1_1:17965122-17965141 None:intergenic 40.0%
ACTTTGTATTTCCGTTGCAG+GGG - chr1_1:17965264-17965283 Msa0011920:intron 40.0%
AGCATGTAACCGACAAAGTT+GGG - chr1_1:17965364-17965383 Msa0011920:intron 40.0%
! GTACAGCAGAAAAATGGGTT+AGG + chr1_1:17965542-17965561 None:intergenic 40.0%
CTTGCAGTACAGCAGAAAAA+TGG + chr1_1:17965548-17965567 None:intergenic 40.0%
!! CTCGCCTAAATGAGTATTGA+AGG - chr1_1:17965611-17965630 Msa0011920:intron 40.0%
TTGGGGTATGCAACTATACA+CGG + chr1_1:17965717-17965736 None:intergenic 40.0%
TTCAACAGCCAATATACCGA+AGG + chr1_1:17965858-17965877 None:intergenic 40.0%
TGAAAACCCATGTTTAAGGG+CGG - chr1_1:17965907-17965926 Msa0011920:intron 40.0%
AAAACACCGCCCTTAAACAT+GGG + chr1_1:17965916-17965935 None:intergenic 40.0%
TTTAAAGAGGAGAAGGTTGG+GGG - chr1_1:17965945-17965964 Msa0011920:intron 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - chr1_1:17965981-17966000 Msa0011920:intron 40.0%
! CTATCCCGCTATAGCATTTT+TGG - chr1_1:17966790-17966809 Msa0011920:intron 40.0%
! ATCCCGCTATAGCATTTTTG+GGG - chr1_1:17966792-17966811 Msa0011920:intron 40.0%
CTCAAAAATTGTATTGGGGG+AGG + chr1_1:17966885-17966904 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - chr1_1:17966897-17966916 Msa0011920:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG - chr1_1:17966898-17966917 Msa0011920:intron 40.0%
AAAAAATCCCCCTCATTTGG+GGG + chr1_1:17966910-17966929 None:intergenic 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG + chr1_1:17967006-17967025 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + chr1_1:17967043-17967062 None:intergenic 40.0%
TTTAATGGAAGACTTTCGGG+AGG - chr1_1:17967195-17967214 Msa0011920:three_prime_UTR 40.0%
TTAATGGAAGACTTTCGGGA+GGG - chr1_1:17967196-17967215 Msa0011920:three_prime_UTR 40.0%
ACTTTGTGGGGTTAAATTCG+GGG + chr1_1:17967380-17967399 None:intergenic 40.0%
ATTTAGGCTATGTCGCAATG+TGG - chr1_1:17967439-17967458 Msa0011920:three_prime_UTR 40.0%
TTTAGGCTATGTCGCAATGT+GGG - chr1_1:17967440-17967459 Msa0011920:three_prime_UTR 40.0%
GGACGAAATCCCTTAACTTT+AGG + chr1_1:17967736-17967755 None:intergenic 40.0%
AGGATGCCAGTCATTAACTT+TGG + chr1_1:17967817-17967836 None:intergenic 40.0%
TGTATCTACCCTTCAAAAGG+GGG - chr1_1:17968215-17968234 Msa0011920:intron 40.0%
GTTTGAACCCAACATTCCTT+CGG - chr1_1:17968237-17968256 Msa0011920:intron 40.0%
TTTGAACCCAACATTCCTTC+GGG - chr1_1:17968238-17968257 Msa0011920:intron 40.0%
GATTGTGACACGCAAGAATT+TGG + chr1_1:17968287-17968306 None:intergenic 40.0%
AGAAAATGCTCTCTAGTGAG+GGG + chr1_1:17968590-17968609 None:intergenic 40.0%
CTAGAAAATGCTCTCTAGTG+AGG + chr1_1:17968592-17968611 None:intergenic 40.0%
TTCCTAATCGTCTTAAAGGG+AGG - chr1_1:17968634-17968653 Msa0011920:intron 40.0%
!! AACCTCCCTTTAAGACGATT+AGG + chr1_1:17968639-17968658 None:intergenic 40.0%
AGCTTCCAATTTAGGAGACT+CGG - chr1_1:17968963-17968982 Msa0011920:intron 40.0%
GTATACCGAGTCTCCTAAAT+TGG + chr1_1:17968971-17968990 None:intergenic 40.0%
! TTTAGGAGACTCGGTATACA+CGG - chr1_1:17968972-17968991 Msa0011920:intron 40.0%
!! CAGTTTTGTCAGGATGAGTT+GGG - chr1_1:17969079-17969098 Msa0011920:intron 40.0%
GGAATTGGATCAACAATGAC+TGG + chr1_1:17969354-17969373 None:intergenic 40.0%
TCAGGTTTCATATGGTAGGT+AGG + chr1_1:17969460-17969479 None:intergenic 40.0%
ATGGTCAGGTTTCATATGGT+AGG + chr1_1:17969464-17969483 None:intergenic 40.0%
GACTATGGTCAGGTTTCATA+TGG + chr1_1:17969468-17969487 None:intergenic 40.0%
CAAAGTATGTGACTATGGTC+AGG + chr1_1:17969478-17969497 None:intergenic 40.0%
CTGACCATAGTCACATACTT+TGG - chr1_1:17969476-17969495 Msa0011920:intron 40.0%
ACAGCCAAAGTATGTGACTA+TGG + chr1_1:17969483-17969502 None:intergenic 40.0%
AGGTTGCTAGAAAGATAGCT+TGG + chr1_1:17969711-17969730 None:intergenic 40.0%
!! CTATCTGGGATGCTCTAAAA+TGG + chr1_1:17969902-17969921 None:intergenic 40.0%
!! AGCATCCCAGATAGTTTGTT+AGG - chr1_1:17969908-17969927 Msa0011920:intron 40.0%
GAAAGAGTGAAAACAGAGAC+AGG + chr1_1:17970100-17970119 None:intergenic 40.0%
GGATATTAGTGAAGCTGATC+TGG - chr1_1:17970274-17970293 Msa0011920:intron 40.0%
AAAACGATAATCTCACCTGC+AGG + chr1_1:17970334-17970353 None:intergenic 40.0%
ACCATTATCCAGCCTATGTT+TGG - chr1_1:17970415-17970434 Msa0011920:intron 40.0%
CCATTATCCAGCCTATGTTT+GGG - chr1_1:17970416-17970435 Msa0011920:intron 40.0%
AATGGCCATTGTTCTTGGTA+TGG - chr1_1:17970493-17970512 Msa0011920:intron 40.0%
AAGCATACAAAGGATGCGTT+TGG + chr1_1:17970596-17970615 None:intergenic 40.0%
ACATTCCTCTCGTTACAATC+TGG - chr1_1:17970705-17970724 Msa0011920:intron 40.0%
GAAAACCAGATTGTAACGAG+AGG + chr1_1:17970713-17970732 None:intergenic 40.0%
AGAAACTCTTACAGTTGGGT+TGG + chr1_1:17970743-17970762 None:intergenic 40.0%
ACTTCTGGTGAATTGTATGC+TGG - chr1_1:17970847-17970866 Msa0011920:intron 40.0%
CTTCTGGTGAATTGTATGCT+GGG - chr1_1:17970848-17970867 Msa0011920:intron 40.0%
GGTACACAAGTAGAAAAGGA+TGG - chr1_1:17971048-17971067 Msa0011920:intron 40.0%
ACACTGTGTGTACAAAGGAA+TGG - chr1_1:17971103-17971122 Msa0011920:intron 40.0%
CTTCCCTATACTCTTACTTC+CGG - chr1_1:17971156-17971175 Msa0011920:intron 40.0%
! TGACCGGAAGTAAGAGTATA+GGG + chr1_1:17971162-17971181 None:intergenic 40.0%
! TTGACCGGAAGTAAGAGTAT+AGG + chr1_1:17971163-17971182 None:intergenic 40.0%
TACATGAAGCAAGAAGTGGA+TGG + chr1_1:17971305-17971324 None:intergenic 40.0%
TACGTACATGAAGCAAGAAG+TGG + chr1_1:17971309-17971328 None:intergenic 40.0%
ACCCCTCAAGCATGTAAATA+CGG - chr1_1:17971372-17971391 Msa0011920:intron 40.0%
TCCGTATTTACATGCTTGAG+GGG + chr1_1:17971376-17971395 None:intergenic 40.0%
CCCCAAAGAACAAAAAAGGT+TGG + chr1_1:17971498-17971517 None:intergenic 40.0%
TAAAAGATCCTCCTCCCAAA+AGG - chr1_1:17971572-17971591 Msa0011920:intron 40.0%
!! TGCATTGAAGTTATTGGCTC+TGG - chr1_1:17971779-17971798 Msa0011920:intron 40.0%
! AGAATTGAGTAGTATCGGGT+GGG + chr1_1:17972088-17972107 None:intergenic 40.0%
TCTCTTATGCCTTTCCCATT+TGG - chr1_1:17972105-17972124 Msa0011920:intron 40.0%
AAAAGCTAGAAGAGGAGACA+GGG + chr1_1:17972231-17972250 None:intergenic 40.0%
! AAGGTTGCTGACATTGACTA+TGG + chr1_1:17972533-17972552 None:intergenic 40.0%
!!! TAGCTCCATGTGTTTTGATC+TGG - chr1_1:17972622-17972641 Msa0011920:intron 40.0%
TCATGCCAGATCAAAACACA+TGG + chr1_1:17972630-17972649 None:intergenic 40.0%
!!! TGTGTTTTGATCTGGCATGA+AGG - chr1_1:17972630-17972649 Msa0011920:intron 40.0%
TATCACAAGAACCTTAGGAG+TGG - chr1_1:17972687-17972706 Msa0011920:intron 40.0%
TACCCACAGTAACTCAGATT+TGG - chr1_1:17972744-17972763 Msa0011920:three_prime_UTR 40.0%
TATTGCCAGATCAAGTACAG+AGG + chr1_1:17972794-17972813 None:intergenic 40.0%
GTACTTGATCTGGCAATAAC+AGG - chr1_1:17972796-17972815 Msa0011920:intron 40.0%
!! CTTAATTTCATGGTGGGCAA+AGG + chr1_1:17972827-17972846 None:intergenic 40.0%
TCCGGACTTAATTTCATGGT+GGG + chr1_1:17972833-17972852 None:intergenic 40.0%
ATCCGGACTTAATTTCATGG+TGG + chr1_1:17972834-17972853 None:intergenic 40.0%
TACCTCTCCTCTCTCTATAT+TGG + chr1_1:17972929-17972948 None:intergenic 40.0%
AATATAGAGAGAGGAGAGGT+AGG - chr1_1:17972928-17972947 Msa0011920:intron 40.0%
ATATAGAGAGAGGAGAGGTA+GGG - chr1_1:17972929-17972948 Msa0011920:intron 40.0%
!! TCTTAAGGGTACTGTCAGTT+GGG + chr1_1:17972974-17972993 None:intergenic 40.0%
!! ATCTTAAGGGTACTGTCAGT+TGG + chr1_1:17972975-17972994 None:intergenic 40.0%
CCTCAAAATACGTTTGACAG+CGG - chr1_1:17972996-17973015 Msa0011920:intron 40.0%
GAGTAATTACTGCGTATTGG+AGG - chr1_1:17973088-17973107 Msa0011920:intron 40.0%
ACAATAGACCTACAGAGAGT+AGG - chr1_1:17973117-17973136 Msa0011920:intron 40.0%
AGAGAGTAGGATCTGAGAAA+GGG - chr1_1:17973130-17973149 Msa0011920:intron 40.0%
! GGTTTAAAGCTGTCTGAAGA+TGG + chr1_1:17973163-17973182 None:intergenic 40.0%
AAACCAGAAATCATGGGAGA+AGG - chr1_1:17973178-17973197 Msa0011920:intron 40.0%
GAAGTCAAACCTCAGTCAAA+TGG + chr1_1:17973280-17973299 None:intergenic 40.0%
AATACCGAGGAAATAGTCCA+AGG - chr1_1:17973300-17973319 Msa0011920:three_prime_UTR 40.0%
CTTAAAAGATCTTGGCACCT+TGG + chr1_1:17973320-17973339 None:intergenic 40.0%
!! CAAGGTGCCAAGATCTTTTA+AGG - chr1_1:17973318-17973337 Msa0011920:three_prime_UTR 40.0%
GACACCAACTGTTGAAGTAA+AGG - chr1_1:17973361-17973380 Msa0011920:three_prime_UTR 40.0%
GTTGACGACATAATTGTCAC+TGG + chr1_1:17973397-17973416 None:intergenic 40.0%
TCTAGTATGCAAGCTCAACA+AGG + chr1_1:17973566-17973585 None:intergenic 40.0%
CAATGGCACTCTTGAAGAAA+AGG + chr1_1:17973632-17973651 None:intergenic 40.0%
!! TTCAAGAGTGCCATTGAGAA+AGG - chr1_1:17973636-17973655 Msa0011920:intron 40.0%
! TAAGTGCCAACCTTTTGACA+AGG - chr1_1:17973681-17973700 Msa0011920:intron 40.0%
!! TTGTCTTTGGCCTTGTCAAA+AGG + chr1_1:17973694-17973713 None:intergenic 40.0%
TGACAAGGCCAAAGACAAAA+TGG - chr1_1:17973696-17973715 Msa0011920:intron 40.0%
! AGTTCGCACCATTTTGTCTT+TGG + chr1_1:17973707-17973726 None:intergenic 40.0%
AAAATGGTGCGAACTGTAAC+AGG - chr1_1:17973712-17973731 Msa0011920:intron 40.0%
CGCATCAAAGAAAATCCTGA+TGG + chr1_1:17973832-17973851 None:intergenic 40.0%
AATACCCATTTGCATCCAAC+GGG - chr1_1:17973853-17973872 Msa0011920:intron 40.0%
! ATCAGCTAAGGCTTGTTTAG+TGG - chr1_1:17973966-17973985 Msa0011920:intron 40.0%
CAAGAGAGTTGGATGAAGTA+TGG - chr1_1:17974011-17974030 Msa0011920:intron 40.0%
!!! GGAATAGGTTTTGTTGGGAT+TGG - chr1_1:17974105-17974124 Msa0011920:intron 40.0%
!!! GTTTTGTTGGGATTGGTTCA+GGG - chr1_1:17974112-17974131 Msa0011920:intron 40.0%
!!! TTCAGGGATAGGTTTTGAAC+TGG - chr1_1:17974128-17974147 Msa0011920:intron 40.0%
GAAGTGTGATTAGGAGATGT+AGG - chr1_1:17974291-17974310 Msa0011920:intron 40.0%
! GCTGATTTCCAATGAGAGTA+AGG - chr1_1:17974375-17974394 Msa0011920:intron 40.0%
! ATCGGTTTCCTTACTCTCAT+TGG + chr1_1:17974386-17974405 None:intergenic 40.0%
GTTATAGCCTTTGTGACAAG+TGG - chr1_1:17974467-17974486 Msa0011920:intron 40.0%
TTGTTGTATGGACGCAGTAA+AGG - chr1_1:17974537-17974556 Msa0011920:intron 40.0%
TGTTGTATGGACGCAGTAAA+GGG - chr1_1:17974538-17974557 Msa0011920:intron 40.0%
ACGCCAAAAAGTTTAGCGTA+TGG - chr1_1:17974606-17974625 Msa0011920:intron 40.0%
CAGCTGTGTATCTTATCAAC+AGG + chr1_1:17974662-17974681 None:intergenic 40.0%
! GTTGATAAGATACACAGCTG+TGG - chr1_1:17974662-17974681 Msa0011920:intron 40.0%
CTTCATTACCTTTGCCATAC+TGG + chr1_1:17974701-17974720 None:intergenic 40.0%
!! ACATCGCCAAATAGTGGATA+TGG + chr1_1:17974745-17974764 None:intergenic 40.0%
AACGTGTATTCTTCATAGGC+TGG + chr1_1:17974811-17974830 None:intergenic 40.0%
AAAGCTGTGCAATCTGATTG+GGG + chr1_1:17974868-17974887 None:intergenic 40.0%
CTAGTTTACACTGATCTGTG+GGG + chr1_1:17975052-17975071 None:intergenic 40.0%
!! TTTTTCTCCTCTTGCTGTCT+TGG + chr1_1:17975133-17975152 None:intergenic 40.0%
AGTAGTTGCACTAGAAGAAC+TGG - chr1_1:17975339-17975358 Msa0011920:intron 40.0%
AATTTCTGTCCTCCACTCAA+TGG + chr1_1:17975382-17975401 None:intergenic 40.0%
CAATGAGAGTCTTCTCAAAG+GGG + chr1_1:17975437-17975456 None:intergenic 40.0%
CCAATGAGAGTCTTCTCAAA+GGG + chr1_1:17975438-17975457 None:intergenic 40.0%
TCCAATGAGAGTCTTCTCAA+AGG + chr1_1:17975439-17975458 None:intergenic 40.0%
TCACATAGCAAGAATCAGCA+TGG - chr1_1:17975470-17975489 Msa0011920:intron 40.0%
! ATGAGATTTTTCGTGGTGTG+TGG - chr1_1:17975538-17975557 Msa0011920:intron 40.0%
!! ATCTATATTGGTAACGGGCA+AGG + chr1_1:17975652-17975671 None:intergenic 40.0%
GGTCCAGATCAGATCTATAT+TGG + chr1_1:17975664-17975683 None:intergenic 40.0%
GGGTAGTCTGATGAATATTC+TGG - chr1_1:17975692-17975711 Msa0011920:intron 40.0%
AATTTCATGCCCTCCTTTAC+TGG + chr1_1:17975823-17975842 None:intergenic 40.0%
ATAGAGATTGTAGTGTGGCA+TGG - chr1_1:17975852-17975871 Msa0011920:intron 40.0%
TATGATCCATGGAGCTACTT+TGG + chr1_1:17975915-17975934 None:intergenic 40.0%
AGTAAAGTTGCTACCTGTTC+CGG - chr1_1:17975983-17976002 Msa0011920:intron 40.0%
TACTGAACATGTGCTTCCAT+AGG - chr1_1:17976045-17976064 Msa0011920:intron 40.0%
GTCGAGTTTGTCAAAGGTTT+GGG + chr1_1:17976125-17976144 None:intergenic 40.0%
TGTCGAGTTTGTCAAAGGTT+TGG + chr1_1:17976126-17976145 None:intergenic 40.0%
TTTGAATTTCACTGGAGTCG+AGG - chr1_1:17976340-17976359 Msa0011920:three_prime_UTR 40.0%
TTGAATTTCACTGGAGTCGA+GGG - chr1_1:17976341-17976360 Msa0011920:three_prime_UTR 40.0%
ATCAGAAGACGACATTGATC+CGG + chr1_1:17976564-17976583 None:intergenic 40.0%
CGAGTCTATAGAGAGATCAT+TGG + chr1_1:17976837-17976856 None:intergenic 40.0%
TATACATCTGATAGGCGCAA+TGG + chr1_1:17976861-17976880 None:intergenic 40.0%
ATTGCGCCTATCAGATGTAT+AGG - chr1_1:17976860-17976879 Msa0011920:intron 40.0%
ACTCGTGTCTAACTATTAGG+CGG - chr1_1:17976961-17976980 Msa0011920:intron 40.0%
TAACTATTAGGCGGCTTTCA+TGG - chr1_1:17976970-17976989 Msa0011920:intron 40.0%
TTTCATGGTTCCAACTGAGT+TGG - chr1_1:17976985-17977004 Msa0011920:intron 40.0%
!!! TAATCCGCGCTTGTTTTAGT+GGG + chr1_1:17977105-17977124 None:intergenic 40.0%
!!! ATAATCCGCGCTTGTTTTAG+TGG + chr1_1:17977106-17977125 None:intergenic 40.0%
CACTTGGATGTTGTGGTATT+TGG + chr1_1:17977437-17977456 None:intergenic 40.0%
GCATAGCTGACCAAATTTAG+TGG + chr1_1:17977465-17977484 None:intergenic 40.0%
GATGTCGTTATTACCCACAA+CGG - chr1_1:17977631-17977650 Msa0011920:intron 40.0%
TTCTTCAGATCCAAGACTAG+GGG - chr1_1:17977698-17977717 Msa0011920:intron 40.0%
ATTTAAGTCTCCCCTAGTCT+TGG + chr1_1:17977711-17977730 None:intergenic 40.0%
GGGAGACTTAAATAACTCCT+TGG - chr1_1:17977718-17977737 Msa0011920:intron 40.0%
TAAATAACTCCTTGGTCTCG+AGG - chr1_1:17977726-17977745 Msa0011920:intron 40.0%
AATCAGTCCTCAAACTGCTT+TGG + chr1_1:17978010-17978029 None:intergenic 40.0%
ATTTCTGTGGTCCAGCATAA+GGG - chr1_1:17978267-17978286 Msa0011920:intron 40.0%
!! GACACCCTCTATCCTTATTT+TGG - chr1_1:17978389-17978408 Msa0011920:intron 40.0%
! ATCTTCAATTTCGAGTCTGG+AGG - chr1_1:17978651-17978670 Msa0011920:intron 40.0%
ACCCTTGCACTTGCTTTATA+TGG - chr1_1:17978757-17978776 Msa0011920:intron 40.0%
CACCATATAAAGCAAGTGCA+AGG + chr1_1:17978762-17978781 None:intergenic 40.0%
CAAAAGGGACACATAGATAG+AGG + chr1_1:17978848-17978867 None:intergenic 40.0%
! TGATTTTGTGGGGTTGAGTT+AGG - chr1_1:17978975-17978994 Msa0011920:intron 40.0%
TGTATGTGGGTGGAATAACA+GGG + chr1_1:17979104-17979123 None:intergenic 40.0%
ATGTATGTGGGTGGAATAAC+AGG + chr1_1:17979105-17979124 None:intergenic 40.0%
! TATGGACTAATGTATGTGGG+TGG + chr1_1:17979114-17979133 None:intergenic 40.0%
GTTCAGGAACATCAGTAGTA+TGG + chr1_1:17979132-17979151 None:intergenic 40.0%
TACTGATGTTCCTGAACAAG+AGG - chr1_1:17979135-17979154 Msa0011920:three_prime_UTR 40.0%
CTAGATGTAATGACTCATGG+GGG - chr1_1:17979306-17979325 Msa0011920:intron 40.0%
TAGATGTAATGACTCATGGG+GGG - chr1_1:17979307-17979326 Msa0011920:intron 40.0%
GATTCCAATCTAGATGGTGA+TGG - chr1_1:17979378-17979397 Msa0011920:intron 40.0%
GAAACCATCACCATCTAGAT+TGG + chr1_1:17979385-17979404 None:intergenic 40.0%
!! GGTTTTGTAAGGGTTGAGTT+AGG + chr1_1:17979962-17979981 None:intergenic 40.0%
! CAAAACCGGTTTATAAGGTG+AGG - chr1_1:17979975-17979994 Msa0011920:intron 40.0%
GCAATCCTCACCTTATAAAC+CGG + chr1_1:17979983-17980002 None:intergenic 40.0%
AGGCCATATTTCATCCAATG+TGG - chr1_1:17980027-17980046 Msa0011920:intron 40.0%
GGCCATATTTCATCCAATGT+GGG - chr1_1:17980028-17980047 Msa0011920:intron 40.0%
GCCATATTTCATCCAATGTG+GGG - chr1_1:17980029-17980048 Msa0011920:intron 40.0%
AATTGATAAGAGCCCCACAT+TGG + chr1_1:17980044-17980063 None:intergenic 40.0%
!! AGTGTCTGTGAGTGTTACTT+TGG - chr1_1:17980772-17980791 Msa0011920:CDS 40.0%
TAGTGAGTAGGAGTTGAACT+TGG + chr1_1:17980802-17980821 None:intergenic 40.0%
! ACATCTTTTTGGACCCAATC+AGG - chr1_1:17980969-17980988 Msa0011920:intron 40.0%
! CATCTTTTTGGACCCAATCA+GGG - chr1_1:17980970-17980989 Msa0011920:intron 40.0%
ATCAACTTAGAGCACATCTG+CGG + chr1_1:17981165-17981184 None:intergenic 40.0%
!! ATGATGGATGAGTTGGAAGA+TGG - chr1_1:17981260-17981279 Msa0011920:intron 40.0%
! TGATGGATGAGTTGGAAGAT+GGG - chr1_1:17981261-17981280 Msa0011920:intron 40.0%
CACAATTGTATCCTGGAAAC+CGG + chr1_1:17981379-17981398 None:intergenic 40.0%
TGGTTGTGATGAATTCTGAG+AGG - chr1_1:17981531-17981550 Msa0011920:intron 40.0%
! GTGATGAATTCTGAGAGGTT+TGG - chr1_1:17981536-17981555 Msa0011920:intron 40.0%
! GAATTCTGAGAGGTTTGGAA+TGG - chr1_1:17981541-17981560 Msa0011920:intron 40.0%
CCAGTACTTTCAAACGATGA+AGG + chr1_1:17981649-17981668 None:intergenic 40.0%
! CCTTCATCGTTTGAAAGTAC+TGG - chr1_1:17981646-17981665 Msa0011920:intron 40.0%
TACTGGAGCAATCATCAGAT+GGG - chr1_1:17981663-17981682 Msa0011920:intron 40.0%
TTGCTTGGCAAGAAACAATC+TGG - chr1_1:17981731-17981750 Msa0011920:intron 40.0%
CGAGTTTCCTATTACCAGAT+TGG - chr1_1:17981763-17981782 Msa0011920:intron 40.0%
TCGACTTCCAATCTGGTAAT+AGG + chr1_1:17981773-17981792 None:intergenic 40.0%
ATTACCAGATTGGAAGTCGA+CGG - chr1_1:17981773-17981792 Msa0011920:intron 40.0%
! CTGCTGCGCATAAGATTTTA+AGG + chr1_1:17981967-17981986 None:intergenic 40.0%
!! CAAATTCCAAAGCATTGGTG+AGG + chr1_1:17982171-17982190 None:intergenic 40.0%
!! CTCACCAATGCTTTGGAATT+TGG - chr1_1:17982169-17982188 Msa0011920:intron 40.0%
AGGAAATTGCTCCAGATCAT+GGG + chr1_1:17982533-17982552 None:intergenic 40.0%
GCAATTTCCTGCACTTAAAC+TGG - chr1_1:17982543-17982562 Msa0011920:intron 40.0%
TAGTTTGACAGGCTCTTCTT+TGG - chr1_1:17982675-17982694 Msa0011920:CDS 40.0%
GTCAACCCATGAGGTTCAAA+AGG + chr1_1:17962009-17962028 None:intergenic 45.0%
GGCTTTGCTCTGACTTTAAC+CGG - chr1_1:17962129-17962148 Msa0011920:intron 45.0%
TCCAAGAGCTGACTAATCTC+GGG + chr1_1:17962184-17962203 None:intergenic 45.0%
GTCCAAGAGCTGACTAATCT+CGG + chr1_1:17962185-17962204 None:intergenic 45.0%
TAGGATACAAGTGCTACGCT+AGG - chr1_1:17962770-17962789 Msa0011920:three_prime_UTR 45.0%
TACAAGTGCTACGCTAGGAT+AGG - chr1_1:17962775-17962794 Msa0011920:three_prime_UTR 45.0%
! ATGCCTTTTCCCACTGAATG+GGG + chr1_1:17963060-17963079 None:intergenic 45.0%
CAGTCTGCTATAAGCTGCAA+TGG + chr1_1:17963342-17963361 None:intergenic 45.0%
CATGTGAATTTCCAGTGACG+GGG + chr1_1:17963477-17963496 None:intergenic 45.0%
GCATGTGAATTTCCAGTGAC+GGG + chr1_1:17963478-17963497 None:intergenic 45.0%
GGCATGTGAATTTCCAGTGA+CGG + chr1_1:17963479-17963498 None:intergenic 45.0%
ACGACATCTCCTTGATGTGT+AGG - chr1_1:17963787-17963806 Msa0011920:intron 45.0%
CCATCATACAAACCCACTTG+AGG + chr1_1:17963843-17963862 None:intergenic 45.0%
! CCTCAAGTGGGTTTGTATGA+TGG - chr1_1:17963840-17963859 Msa0011920:intron 45.0%
CGATTCTTCAGAGGTAAGAG+AGG - chr1_1:17963926-17963945 Msa0011920:intron 45.0%
AGAAGGTGATGCTTCAGAGA+CGG + chr1_1:17963961-17963980 None:intergenic 45.0%
CGTGAGCAACTAGATAACTG+TGG - chr1_1:17964212-17964231 Msa0011920:intron 45.0%
! TACCAAAAACTGCCGCCTTT+TGG - chr1_1:17964250-17964269 Msa0011920:intron 45.0%
! TTCCAAAAGGCGGCAGTTTT+TGG + chr1_1:17964255-17964274 None:intergenic 45.0%
CACACGGGGACATTTATGAT+GGG - chr1_1:17964404-17964423 Msa0011920:intron 45.0%
TCTCACTTGAATGAGGTTGC+GGG - chr1_1:17964567-17964586 Msa0011920:intron 45.0%
GGATCTAAGTTTGCCTCACT+AGG + chr1_1:17964706-17964725 None:intergenic 45.0%
GGGAACACTCATCACTCATA+AGG + chr1_1:17964727-17964746 None:intergenic 45.0%
TGTCTATGCTTCAAGCCTCA+TGG - chr1_1:17965061-17965080 Msa0011920:intron 45.0%
GTCTATGCTTCAAGCCTCAT+GGG - chr1_1:17965062-17965081 Msa0011920:intron 45.0%
ACATCATAGGGCTTTGCATG+TGG - chr1_1:17965171-17965190 Msa0011920:intron 45.0%
TTGGTTGTCAGATTGCAGAC+CGG - chr1_1:17965328-17965347 Msa0011920:intron 45.0%
CATGCTCAATATCCGATTCC+CGG + chr1_1:17965350-17965369 None:intergenic 45.0%
GAGCATGTAACCGACAAAGT+TGG - chr1_1:17965363-17965382 Msa0011920:intron 45.0%
AGAGACATAGCATGTGTGAG+TGG - chr1_1:17965486-17965505 Msa0011920:intron 45.0%
CAAAACACCGCCCTTAAACA+TGG + chr1_1:17965917-17965936 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr1_1:17965985-17966004 Msa0011920:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr1_1:17965986-17966005 Msa0011920:intron 45.0%
AGTTAATAGCGGCGCTATAG+CGG - chr1_1:17966189-17966208 Msa0011920:intron 45.0%
TATCTCATAACGCTACGCCA+TGG + chr1_1:17966265-17966284 None:intergenic 45.0%
AAAACCGCTATGCAGTGTTG+CGG + chr1_1:17966303-17966322 None:intergenic 45.0%
GCGCCGTAAAGAATGAAAGA+AGG + chr1_1:17966445-17966464 None:intergenic 45.0%
GACCCCAAAAATGCTATAGC+GGG + chr1_1:17966797-17966816 None:intergenic 45.0%
CGACCCCAAAAATGCTATAG+CGG + chr1_1:17966798-17966817 None:intergenic 45.0%
! TTGTATTGGGGGAGGGTTTT+GGG + chr1_1:17966877-17966896 None:intergenic 45.0%
! ATTGTATTGGGGGAGGGTTT+TGG + chr1_1:17966878-17966897 None:intergenic 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG - chr1_1:17966899-17966918 Msa0011920:intron 45.0%
TAGAAGACATTGGGAATGGG+AGG + chr1_1:17966968-17966987 None:intergenic 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + chr1_1:17966997-17967016 None:intergenic 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG + chr1_1:17967010-17967029 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr1_1:17965986-17966005 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr1_1:17965985-17966004 None:intergenic 45.0%
TAATGGAAGACTTTCGGGAG+GGG - chr1_1:17967197-17967216 Msa0011920:three_prime_UTR 45.0%
TTTAGCTACCAACCCTTGCA+AGG - chr1_1:17967250-17967269 Msa0011920:three_prime_UTR 45.0%
TTAGCTACCAACCCTTGCAA+GGG - chr1_1:17967251-17967270 Msa0011920:three_prime_UTR 45.0%
TATGTCGCAATGTGGGACTT+GGG - chr1_1:17967447-17967466 Msa0011920:three_prime_UTR 45.0%
! AGGATGTAGTCTTGAGCACA+TGG - chr1_1:17967643-17967662 Msa0011920:intron 45.0%
! GGATGTAGTCTTGAGCACAT+GGG - chr1_1:17967644-17967663 Msa0011920:intron 45.0%
! CGTCCCAAAATTAACGGGTA+AGG - chr1_1:17967751-17967770 Msa0011920:intron 45.0%
TTCTAAGTTCGTCGGATGCT+TGG - chr1_1:17967924-17967943 Msa0011920:intron 45.0%
TATCCCTTTGCGCTAAAGAG+AGG - chr1_1:17968186-17968205 Msa0011920:intron 45.0%
! GGTTCAAACCCCCTTTTGAA+GGG + chr1_1:17968226-17968245 None:intergenic 45.0%
TGATGTCCCGAAGGAATGTT+GGG + chr1_1:17968247-17968266 None:intergenic 45.0%
ATGATGTCCCGAAGGAATGT+TGG + chr1_1:17968248-17968267 None:intergenic 45.0%
AGATGACAACCTTGCACTCA+AGG - chr1_1:17968544-17968563 Msa0011920:intron 45.0%
CCAACTCATCCTGACAAAAC+TGG + chr1_1:17969081-17969100 None:intergenic 45.0%
!! CCAGTTTTGTCAGGATGAGT+TGG - chr1_1:17969078-17969097 Msa0011920:intron 45.0%
TGGATCAACAATGACTGGCA+AGG + chr1_1:17969349-17969368 None:intergenic 45.0%
CTAGCTCAACTGGCAAAAGA+AGG + chr1_1:17969731-17969750 None:intergenic 45.0%
! CTTCTTTTGCCAGTTGAGCT+AGG - chr1_1:17969729-17969748 Msa0011920:intron 45.0%
CCCAAACATAGGCTGGATAA+TGG + chr1_1:17970419-17970438 None:intergenic 45.0%
GACACCATGTACCCAAACAT+AGG + chr1_1:17970430-17970449 None:intergenic 45.0%
!! AAGCAGCTTTTTAAGCTCCG+TGG - chr1_1:17970532-17970551 Msa0011920:intron 45.0%
TTCCAAATGCTCGAAGGTCT+TGG - chr1_1:17971027-17971046 Msa0011920:intron 45.0%
TACCAAGACCTTCGAGCATT+TGG + chr1_1:17971032-17971051 None:intergenic 45.0%
CAAAACCTTCTTGGTGAGAC+AGG + chr1_1:17971130-17971149 None:intergenic 45.0%
! CTGTCTCACCAAGAAGGTTT+TGG - chr1_1:17971128-17971147 Msa0011920:intron 45.0%
AAGGAGCTCCAAAACCTTCT+TGG + chr1_1:17971139-17971158 None:intergenic 45.0%
! CGGAAGTAAGAGTATAGGGA+AGG + chr1_1:17971158-17971177 None:intergenic 45.0%
TGAAACAGCTTGCAGTTGAC+CGG + chr1_1:17971178-17971197 None:intergenic 45.0%
! AAAGGCCGGTTCCAATGAAT+CGG - chr1_1:17971217-17971236 Msa0011920:intron 45.0%
! AGTAGCCGATTCATTGGAAC+CGG + chr1_1:17971225-17971244 None:intergenic 45.0%
TCCAATGAATCGGCTACTTC+AGG - chr1_1:17971227-17971246 Msa0011920:intron 45.0%
! ACCTGAAGTAGCCGATTCAT+TGG + chr1_1:17971231-17971250 None:intergenic 45.0%
GAATTCTAACAACAGCTCCC+AGG - chr1_1:17971430-17971449 Msa0011920:intron 45.0%
! TATTGAGGCTTCCTTTTGGG+AGG + chr1_1:17971586-17971605 None:intergenic 45.0%
TGACACTTTCAGGGTGATGT+TGG - chr1_1:17971725-17971744 Msa0011920:intron 45.0%
TTTCAGGGTGATGTTGGATG+TGG - chr1_1:17971731-17971750 Msa0011920:intron 45.0%
TTCAGGGTGATGTTGGATGT+GGG - chr1_1:17971732-17971751 Msa0011920:intron 45.0%
!! AGTTATTGGCTCTGGCTATC+AGG - chr1_1:17971787-17971806 Msa0011920:intron 45.0%
GATCATGTCTGTTCTCAGCT+TGG + chr1_1:17972051-17972070 None:intergenic 45.0%
! GAGAATTGAGTAGTATCGGG+TGG + chr1_1:17972089-17972108 None:intergenic 45.0%
AGGTTTCATGACGTGTACGA+TGG + chr1_1:17972150-17972169 None:intergenic 45.0%
AACACATGGCAGTATAGGAG+AGG + chr1_1:17972184-17972203 None:intergenic 45.0%
GAAAAGCTAGAAGAGGAGAC+AGG + chr1_1:17972232-17972251 None:intergenic 45.0%
AGTCAACATTCCCTAGTGAC+TGG - chr1_1:17972365-17972384 Msa0011920:intron 45.0%
GGTTCTCAAGCCTTCAAATC+TGG - chr1_1:17972495-17972514 Msa0011920:intron 45.0%
CTCAAGCCTTCAAATCTGGT+AGG - chr1_1:17972499-17972518 Msa0011920:intron 45.0%
AAGCCTTCAAATCTGGTAGG+AGG - chr1_1:17972502-17972521 Msa0011920:intron 45.0%
CTACCTCCTACCAGATTTGA+AGG + chr1_1:17972508-17972527 None:intergenic 45.0%
! CTTTTTGTCTCCAACGTTCC+TGG + chr1_1:17972563-17972582 None:intergenic 45.0%
AGTCTCTTTCACCACTCCTA+AGG + chr1_1:17972701-17972720 None:intergenic 45.0%
AAGAGACTCCTAACTCAGAG+AGG - chr1_1:17972713-17972732 Msa0011920:intron 45.0%
GGCCAAATCTGAGTTACTGT+GGG + chr1_1:17972749-17972768 None:intergenic 45.0%
TGGCCAAATCTGAGTTACTG+TGG + chr1_1:17972750-17972769 None:intergenic 45.0%
TTCAGCCTCTGTACTTGATC+TGG - chr1_1:17972786-17972805 Msa0011920:three_prime_UTR 45.0%
GCCCACCATGAAATTAAGTC+CGG - chr1_1:17972829-17972848 Msa0011920:intron 45.0%
GAATACACATGCACCAGAAG+TGG - chr1_1:17972858-17972877 Msa0011920:intron 45.0%
CAGTAGGCCAATATAGAGAG+AGG - chr1_1:17972919-17972938 Msa0011920:intron 45.0%
!! CTTAAGGGTACTGTCAGTTG+GGG + chr1_1:17972973-17972992 None:intergenic 45.0%
! CCGCTGTCAAACGTATTTTG+AGG + chr1_1:17972999-17973018 None:intergenic 45.0%
GCGGTCCATTGAGATTCTAA+TGG - chr1_1:17973015-17973034 Msa0011920:intron 45.0%
GCCGAGTAATTACTGCGTAT+TGG - chr1_1:17973085-17973104 Msa0011920:intron 45.0%
TCTCAGATCCTACTCTCTGT+AGG + chr1_1:17973128-17973147 None:intergenic 45.0%
CAGAGAGTAGGATCTGAGAA+AGG - chr1_1:17973129-17973148 Msa0011920:intron 45.0%
GAGAGTAGGATCTGAGAAAG+GGG - chr1_1:17973131-17973150 Msa0011920:intron 45.0%
AGAGTAGGATCTGAGAAAGG+GGG - chr1_1:17973132-17973151 Msa0011920:intron 45.0%
CTTCCTTCTCCCATGATTTC+TGG + chr1_1:17973184-17973203 None:intergenic 45.0%
TCTAGCCAAAACCAACATGC+AGG + chr1_1:17973218-17973237 None:intergenic 45.0%
AGAAGAGAGCCATTTGACTG+AGG - chr1_1:17973268-17973287 Msa0011920:intron 45.0%
! GAGGTTTGACTTCAATACCG+AGG - chr1_1:17973287-17973306 Msa0011920:intron 45.0%
CAAAGATGGATCGCATTTGC+TGG - chr1_1:17973462-17973481 Msa0011920:three_prime_UTR 45.0%
AAGCTCAACAAGGCTCTCTA+TGG + chr1_1:17973556-17973575 None:intergenic 45.0%
TTGTTTGTGTGCTCGTATCC+TGG - chr1_1:17973589-17973608 Msa0011920:intron 45.0%
!! CTTTGGCCTTGTCAAAAGGT+TGG + chr1_1:17973690-17973709 None:intergenic 45.0%
ATACCCATTTGCATCCAACG+GGG - chr1_1:17973854-17973873 Msa0011920:intron 45.0%
AAGCCAGGTAGAATCAGCTA+AGG - chr1_1:17973954-17973973 Msa0011920:intron 45.0%
! AAGCCTTAGCTGATTCTACC+TGG + chr1_1:17973960-17973979 None:intergenic 45.0%
GCATGTGTAAGCAAGAGAGT+TGG - chr1_1:17974000-17974019 Msa0011920:intron 45.0%
GGGACATGTAATACCAGTCT+TGG - chr1_1:17974032-17974051 Msa0011920:intron 45.0%
ATGAATACACGTGCCAAGAC+TGG + chr1_1:17974048-17974067 None:intergenic 45.0%
GTCTTGGCACGTGTATTCAT+AGG - chr1_1:17974048-17974067 Msa0011920:intron 45.0%
GGATGAATACTAGGTAGAGG+AGG - chr1_1:17974069-17974088 Msa0011920:intron 45.0%
GGTCTCTTGTATGCTGGAAT+AGG - chr1_1:17974090-17974109 Msa0011920:intron 45.0%
!!! GGTTTTGTTGGGATTGGTTC+AGG - chr1_1:17974111-17974130 Msa0011920:intron 45.0%
!!! AGGGATAGGTTTTGAACTGG+AGG - chr1_1:17974131-17974150 Msa0011920:intron 45.0%
!!! GGTTTTGAACTGGAGGATGA+TGG - chr1_1:17974138-17974157 Msa0011920:intron 45.0%
! TTTGAACTGGAGGATGATGG+TGG - chr1_1:17974141-17974160 Msa0011920:intron 45.0%
! TTGAACTGGAGGATGATGGT+GGG - chr1_1:17974142-17974161 Msa0011920:intron 45.0%
TGCTGTCAGTGATTCAGGAA+TGG - chr1_1:17974167-17974186 Msa0011920:intron 45.0%
GCTGTCAGTGATTCAGGAAT+GGG - chr1_1:17974168-17974187 Msa0011920:intron 45.0%
TTCAGGAATGGGAACAGAAC+TGG - chr1_1:17974179-17974198 Msa0011920:intron 45.0%
! GGTGTGTTGTTAATGTGGGT+TGG - chr1_1:17974219-17974238 Msa0011920:three_prime_UTR 45.0%
!! TGGGTTGGTGTACTAAGAAC+AGG - chr1_1:17974234-17974253 Msa0011920:three_prime_UTR 45.0%
GTTGGTGTACTAAGAACAGG+AGG - chr1_1:17974237-17974256 Msa0011920:three_prime_UTR 45.0%
ACAGGAGGTGAATTGTGAGA+AGG - chr1_1:17974252-17974271 Msa0011920:three_prime_UTR 45.0%
GTGTGATTAGGAGATGTAGG+TGG - chr1_1:17974294-17974313 Msa0011920:intron 45.0%
AGATGTAGGTGGTGAAGCAA+TGG - chr1_1:17974305-17974324 Msa0011920:intron 45.0%
GATGTAGGTGGTGAAGCAAT+GGG - chr1_1:17974306-17974325 Msa0011920:intron 45.0%
GGAATAGCAGCAGGTACAAA+TGG - chr1_1:17974327-17974346 Msa0011920:intron 45.0%
GCAGGTACAAATGGAGATAG+TGG - chr1_1:17974336-17974355 Msa0011920:intron 45.0%
AGGTCGTCTCTATATCTCCA+AGG + chr1_1:17974427-17974446 None:intergenic 45.0%
GGTTACTCCACTTGTCACAA+AGG + chr1_1:17974477-17974496 None:intergenic 45.0%
GCAAACTGAATTGCAGACGT+AGG - chr1_1:17974633-17974652 Msa0011920:intron 45.0%
GCATAATCCCAGTATGGCAA+AGG - chr1_1:17974690-17974709 Msa0011920:intron 45.0%
ACGGAAACATCGCCAAATAG+TGG + chr1_1:17974751-17974770 None:intergenic 45.0%
! ACCAAAATGGCATGGTGGAA+CGG + chr1_1:17974770-17974789 None:intergenic 45.0%
!!! CACCATGCCATTTTGGTGAT+GGG - chr1_1:17974773-17974792 Msa0011920:intron 45.0%
GCCCCCTTTACATATGTTAC+TGG + chr1_1:17975025-17975044 None:intergenic 45.0%
GTAACATATGTAAAGGGGGC+AGG - chr1_1:17975025-17975044 Msa0011920:intron 45.0%
! GTAGTTTGAGACGGAGTAGA+AGG - chr1_1:17975091-17975110 Msa0011920:intron 45.0%
AGCTTTACCAAGACAGCAAG+AGG - chr1_1:17975123-17975142 Msa0011920:intron 45.0%
GCACTAGAAGAACTGGAACT+TGG - chr1_1:17975346-17975365 Msa0011920:intron 45.0%
GGACAAGTAGAACCATTGAG+TGG - chr1_1:17975367-17975386 Msa0011920:intron 45.0%
CAAGTAGAACCATTGAGTGG+AGG - chr1_1:17975370-17975389 Msa0011920:intron 45.0%
!! AAAGGGGTGCTTGACAAAGA+TGG + chr1_1:17975421-17975440 None:intergenic 45.0%
! CCCTTTGAGAAGACTCTCAT+TGG - chr1_1:17975435-17975454 Msa0011920:intron 45.0%
GAGGAACCAGAGGAAATTAC+TGG - chr1_1:17975622-17975641 Msa0011920:intron 45.0%
ATCTGATCTGGACCCTCAAA+TGG - chr1_1:17975670-17975689 Msa0011920:intron 45.0%
TCTGATCTGGACCCTCAAAT+GGG - chr1_1:17975671-17975690 Msa0011920:intron 45.0%
CATCAGACTACCCCATTTGA+GGG + chr1_1:17975685-17975704 None:intergenic 45.0%
TCATCAGACTACCCCATTTG+AGG + chr1_1:17975686-17975705 None:intergenic 45.0%
GTTAATTGGTACCCAGACTC+TGG + chr1_1:17975745-17975764 None:intergenic 45.0%
! AAGGAGGGCATGAAATTCTG+AGG - chr1_1:17975826-17975845 Msa0011920:intron 45.0%
GGTGGATAGAGATTGTAGTG+TGG - chr1_1:17975847-17975866 Msa0011920:intron 45.0%
ATTGTAGTGTGGCATGGACA+AGG - chr1_1:17975858-17975877 Msa0011920:intron 45.0%
TAAGTCTTGACCTGTTCCCT+GGG + chr1_1:17975940-17975959 None:intergenic 45.0%
TTACTCCATCTCTCATGCCA+TGG + chr1_1:17975968-17975987 None:intergenic 45.0%
CTCGACATTGTACAGAACTC+CGG - chr1_1:17976139-17976158 Msa0011920:intron 45.0%
!! TTTGATGGTTCTGGTGAGCT+TGG + chr1_1:17976210-17976229 None:intergenic 45.0%
CAAAACTCTTGAAGATGCGG+CGG + chr1_1:17976324-17976343 None:intergenic 45.0%
! GCAGGTTGAACGTGTAATCA+AGG + chr1_1:17976396-17976415 None:intergenic 45.0%
TGATTACACGTTCAACCTGC+TGG - chr1_1:17976396-17976415 Msa0011920:three_prime_UTR 45.0%
TGGATTGCAACCAACTCAGT+TGG + chr1_1:17976998-17977017 None:intergenic 45.0%
GCTTGCGTTGCTTGAAAACT+TGG - chr1_1:17977033-17977052 Msa0011920:intron 45.0%
GTTGCTTGAAAACTTGGACG+AGG - chr1_1:17977039-17977058 Msa0011920:intron 45.0%
CCAGTGAGTAAAGCAACAGT+TGG + chr1_1:17977076-17977095 None:intergenic 45.0%
!! CCAACTGTTGCTTTACTCAC+TGG - chr1_1:17977073-17977092 Msa0011920:intron 45.0%
!!! AATCCGCGCTTGTTTTAGTG+GGG + chr1_1:17977104-17977123 None:intergenic 45.0%
CGATTGAAATTTCTCCGGTC+TGG + chr1_1:17977239-17977258 None:intergenic 45.0%
GCTGTCTGCAAACAAACTGT+GGG + chr1_1:17977271-17977290 None:intergenic 45.0%
! TGCAGACAGCGTTGAATTCT+CGG - chr1_1:17977281-17977300 Msa0011920:intron 45.0%
ATCCACCACAGCAATACGTA+AGG + chr1_1:17977307-17977326 None:intergenic 45.0%
! CGCTTTGGTGTGATTCAAAG+AGG - chr1_1:17977336-17977355 Msa0011920:intron 45.0%
TATTACCCACAACGGTCATC+AGG - chr1_1:17977639-17977658 Msa0011920:intron 45.0%
ATTACCCACAACGGTCATCA+GGG - chr1_1:17977640-17977659 Msa0011920:intron 45.0%
TATTCCCTGATGACCGTTGT+GGG + chr1_1:17977647-17977666 None:intergenic 45.0%
ATATTCCCTGATGACCGTTG+TGG + chr1_1:17977648-17977667 None:intergenic 45.0%
TTGGCTATACTGGAAGCAAC+CGG - chr1_1:17977797-17977816 Msa0011920:intron 45.0%
! TCGGTGCCTTATTCATACCT+TGG - chr1_1:17977847-17977866 Msa0011920:intron 45.0%
TTGCTCACCAAAGCAGTTTG+AGG - chr1_1:17978000-17978019 Msa0011920:intron 45.0%
ATAGTTTGGTCTCTGTGCTG+TGG - chr1_1:17978054-17978073 Msa0011920:intron 45.0%
TCCAGCATAAGTGTGAGTGT+TGG - chr1_1:17978077-17978096 Msa0011920:intron 45.0%
TCCAACACTCACACTTATGC+TGG + chr1_1:17978081-17978100 None:intergenic 45.0%
GATTTCTGTGGTCCAGCATA+AGG - chr1_1:17978266-17978285 Msa0011920:intron 45.0%
TTTCTGTGGTCCAGCATAAG+GGG - chr1_1:17978268-17978287 Msa0011920:intron 45.0%
TGGTGATATGTCACTGACAC+AGG - chr1_1:17978777-17978796 Msa0011920:intron 45.0%
GACACATAGATAGAGGAAGG+AGG + chr1_1:17978841-17978860 None:intergenic 45.0%
AGGGACACATAGATAGAGGA+AGG + chr1_1:17978844-17978863 None:intergenic 45.0%
GTAGTATCTCTAGTCGTCGT+AGG + chr1_1:17978911-17978930 None:intergenic 45.0%
GACGACTAGAGATACTACCT+AGG - chr1_1:17978913-17978932 Msa0011920:intron 45.0%
CTACCTAGGCAGTGCTTAAA+AGG - chr1_1:17978927-17978946 Msa0011920:intron 45.0%
!! AAGCCTTTTAAGCACTGCCT+AGG + chr1_1:17978933-17978952 None:intergenic 45.0%
TAGGCAGTGCTTAAAAGGCT+TGG - chr1_1:17978932-17978951 Msa0011920:intron 45.0%
!! ACTAAACATCCAGAGCGTTG+AGG + chr1_1:17979054-17979073 None:intergenic 45.0%
! ACGCTCTGGATGTTTAGTCT+TGG - chr1_1:17979056-17979075 Msa0011920:three_prime_UTR 45.0%
! CGCTCTGGATGTTTAGTCTT+GGG - chr1_1:17979057-17979076 Msa0011920:three_prime_UTR 45.0%
TCAACACAAGCCTCTTGTTC+AGG + chr1_1:17979148-17979167 None:intergenic 45.0%
!!! TTTGTTTTAGCAACTGCGGC+CGG - chr1_1:17979697-17979716 Msa0011920:intron 45.0%
GCCCCACATTGGATGAAATA+TGG + chr1_1:17980033-17980052 None:intergenic 45.0%
AATCCTTCCTGGTGGTAAGT+CGG + chr1_1:17980432-17980451 None:intergenic 45.0%
GTTTGAACAGGAATCCTTCC+TGG + chr1_1:17980443-17980462 None:intergenic 45.0%
GGGAAGTGACAAAGGATTTG+AGG - chr1_1:17980475-17980494 Msa0011920:CDS 45.0%
AGGATTTGAGGATGCCTACA+AGG - chr1_1:17980487-17980506 Msa0011920:CDS 45.0%
! GGGTTTTTGCCAGATGATGA+TGG - chr1_1:17981244-17981263 Msa0011920:intron 45.0%
CCAACTCATCCATCATCATC+TGG + chr1_1:17981256-17981275 None:intergenic 45.0%
!! CCAGATGATGATGGATGAGT+TGG - chr1_1:17981253-17981272 Msa0011920:intron 45.0%
! GATGGATGAGTTGGAAGATG+GGG - chr1_1:17981262-17981281 Msa0011920:intron 45.0%
! ATGGATGAGTTGGAAGATGG+GGG - chr1_1:17981263-17981282 Msa0011920:intron 45.0%
CGGTTTCCAGGATACAATTG+TGG - chr1_1:17981377-17981396 Msa0011920:intron 45.0%
! ACGTTAGGGAAGTTTAGGAC+TGG - chr1_1:17981440-17981459 Msa0011920:intron 45.0%
! TGTTCCAGATGCATCGATGA+TGG - chr1_1:17981511-17981530 Msa0011920:intron 45.0%
ACAACCATCATCGATGCATC+TGG + chr1_1:17981518-17981537 None:intergenic 45.0%
TTTCAAACGATGAAGGCCAC+TGG + chr1_1:17981642-17981661 None:intergenic 45.0%
GTACTGGAGCAATCATCAGA+TGG - chr1_1:17981662-17981681 Msa0011920:intron 45.0%
GACCTATTATTACGTGGACC+TGG - chr1_1:17981704-17981723 Msa0011920:intron 45.0%
CACCAGGTCCACGTAATAAT+AGG + chr1_1:17981709-17981728 None:intergenic 45.0%
CTTAAGTGCTTCCCATGATC+TGG - chr1_1:17982519-17982538 Msa0011920:intron 45.0%
CAGGAAATTGCTCCAGATCA+TGG + chr1_1:17982534-17982553 None:intergenic 45.0%
GACTTGATCAATCACCTAGC+AGG + chr1_1:17982594-17982613 None:intergenic 45.0%
!! CTTATTATAAAAAATTTAAA+CGG + chr1_1:17967616-17967635 None:intergenic 5.0%
! TTGAACCTCATGGGTTGACC+TGG - chr1_1:17962010-17962029 Msa0011920:three_prime_UTR 50.0%
AGGTACAAGTCTACACCACC+AGG + chr1_1:17962031-17962050 None:intergenic 50.0%
GGTGGTGTAGACTTGTACCT+CGG - chr1_1:17962031-17962050 Msa0011920:intron 50.0%
TTTGAACCTGAGACCTCGAG+AGG + chr1_1:17962065-17962084 None:intergenic 50.0%
GTCTCAGGTTCAAATCCCTC+TGG - chr1_1:17962071-17962090 Msa0011920:intron 50.0%
AATCCCACCATCCACTAGCA+GGG + chr1_1:17962157-17962176 None:intergenic 50.0%
TAATCCCACCATCCACTAGC+AGG + chr1_1:17962158-17962177 None:intergenic 50.0%
CCAAGAGCTGACTAATCTCG+GGG + chr1_1:17962183-17962202 None:intergenic 50.0%
CAGTGCTCTTTACACCATGC+TGG + chr1_1:17962589-17962608 None:intergenic 50.0%
GAGGGGGACTGATGAAATTG+AGG - chr1_1:17962867-17962886 Msa0011920:three_prime_UTR 50.0%
TGACCCCATTCAGTGGGAAA+AGG - chr1_1:17963054-17963073 Msa0011920:three_prime_UTR 50.0%
CGCAGATTAGAACGCAATCC+CGG + chr1_1:17963223-17963242 None:intergenic 50.0%
!! GGAGGAATTTATGGTGGGTG+TGG - chr1_1:17963398-17963417 Msa0011920:intron 50.0%
ATTATTGCCTACCCCGTCAC+TGG - chr1_1:17963463-17963482 Msa0011920:intron 50.0%
! TGAATTTCCAGTGACGGGGT+AGG + chr1_1:17963473-17963492 None:intergenic 50.0%
ATGCGGAGGGTGAAGAGAAT+AGG + chr1_1:17963500-17963519 None:intergenic 50.0%
TTTGGGTAGTGCTCCTCAAG+TGG - chr1_1:17963827-17963846 Msa0011920:intron 50.0%
TTGGGTAGTGCTCCTCAAGT+GGG - chr1_1:17963828-17963847 Msa0011920:intron 50.0%
TAACTGTGGGTTTCACACGG+TGG - chr1_1:17964226-17964245 Msa0011920:intron 50.0%
AACTGTGGGTTTCACACGGT+GGG - chr1_1:17964227-17964246 Msa0011920:intron 50.0%
GCACACGGGGACATTTATGA+TGG - chr1_1:17964403-17964422 Msa0011920:intron 50.0%
ATGTAGAACAGGCCTCGAGA+GGG + chr1_1:17964849-17964868 None:intergenic 50.0%
TATGTAGAACAGGCCTCGAG+AGG + chr1_1:17964850-17964869 None:intergenic 50.0%
CGAGGCCTGTTCTACATAAG+TGG - chr1_1:17964852-17964871 Msa0011920:intron 50.0%
ACTCTCACACAAAGCCCATG+AGG + chr1_1:17965079-17965098 None:intergenic 50.0%
TGGTTGTCAGATTGCAGACC+GGG - chr1_1:17965329-17965348 Msa0011920:intron 50.0%
TCAGATTGCAGACCGGGAAT+CGG - chr1_1:17965335-17965354 Msa0011920:intron 50.0%
CATAGCATGTGTGAGTGGCA+AGG - chr1_1:17965491-17965510 Msa0011920:intron 50.0%
GGCGAGCATCTAAGAACTTG+AGG + chr1_1:17965597-17965616 None:intergenic 50.0%
GGGGGATCCCAAATTCTCTA+AGG - chr1_1:17965963-17965982 Msa0011920:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr1_1:17965984-17966003 Msa0011920:intron 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - chr1_1:17965991-17966010 Msa0011920:intron 50.0%
AGCGCCGCTATTAACTACTC+TGG + chr1_1:17966185-17966204 None:intergenic 50.0%
TGGCTTATTGCATAGCGGTC+CGG + chr1_1:17966245-17966264 None:intergenic 50.0%
GACCGCTATGCAATAAGCCA+TGG - chr1_1:17966245-17966264 Msa0011920:intron 50.0%
CGCCATGGCTTATTGCATAG+CGG + chr1_1:17966250-17966269 None:intergenic 50.0%
GGCGTAGCGTTATGAGATAG+CGG - chr1_1:17966266-17966285 Msa0011920:intron 50.0%
! ATGAGATAGCGGCGCAATAG+CGG - chr1_1:17966277-17966296 Msa0011920:intron 50.0%
GAAATAGCGGTCATAGCGCT+AGG - chr1_1:17966765-17966784 Msa0011920:intron 50.0%
! TGTATTGGGGGAGGGTTTTG+GGG + chr1_1:17966876-17966895 None:intergenic 50.0%
TTGAGTTCCCCCAAATGAGG+GGG - chr1_1:17966900-17966919 Msa0011920:intron 50.0%
ACATTGGGAATGGGAGGAGA+GGG + chr1_1:17966962-17966981 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr1_1:17965984-17966003 None:intergenic 50.0%
! GGGGATGTTGTTCTAGGTCA+AGG - chr1_1:17967216-17967235 Msa0011920:three_prime_UTR 50.0%
TCCACCATAAGCCCTTGCAA+GGG + chr1_1:17967265-17967284 None:intergenic 50.0%
TTCCACCATAAGCCCTTGCA+AGG + chr1_1:17967266-17967285 None:intergenic 50.0%
TGTGGGGTTAAATTCGGGGA+AGG + chr1_1:17967376-17967395 None:intergenic 50.0%
CTATGTCGCAATGTGGGACT+TGG - chr1_1:17967446-17967465 Msa0011920:three_prime_UTR 50.0%
! TAGTCTTGAGCACATGGGCT+CGG - chr1_1:17967649-17967668 Msa0011920:intron 50.0%
TGGCCTCTCTTTAGCGCAAA+GGG + chr1_1:17968192-17968211 None:intergenic 50.0%
ATGGCCTCTCTTTAGCGCAA+AGG + chr1_1:17968193-17968212 None:intergenic 50.0%
! GGGTTCAAACCCCCTTTTGA+AGG + chr1_1:17968227-17968246 None:intergenic 50.0%
TCCTTCGGGACATCATTGCA+AGG - chr1_1:17968252-17968271 Msa0011920:intron 50.0%
ACCTTGCAATGATGTCCCGA+AGG + chr1_1:17968256-17968275 None:intergenic 50.0%
!! TGAGGGGAGAGTGCTATCTT+GGG + chr1_1:17968574-17968593 None:intergenic 50.0%
ACTCGGTATACACGGATCCT+TGG - chr1_1:17968980-17968999 Msa0011920:intron 50.0%
TATACACGGATCCTTGGCAG+CGG - chr1_1:17968986-17969005 Msa0011920:intron 50.0%
ATCTCAATATGCCGCTGCCA+AGG + chr1_1:17969000-17969019 None:intergenic 50.0%
CCATGTACCCAAACATAGGC+TGG + chr1_1:17970426-17970445 None:intergenic 50.0%
CCAGCCTATGTTTGGGTACA+TGG - chr1_1:17970423-17970442 Msa0011920:intron 50.0%
ATGGTCCTGTCTCACCAAGA+AGG - chr1_1:17971122-17971141 Msa0011920:intron 50.0%
! TTGAGTAGTATCGGGTGGGT+TGG + chr1_1:17972084-17972103 None:intergenic 50.0%
ATGGCAGTATAGGAGAGGAG+GGG + chr1_1:17972179-17972198 None:intergenic 50.0%
CATGGCAGTATAGGAGAGGA+GGG + chr1_1:17972180-17972199 None:intergenic 50.0%
ACATGGCAGTATAGGAGAGG+AGG + chr1_1:17972181-17972200 None:intergenic 50.0%
CTAGCAACTGCCAGTCACTA+GGG + chr1_1:17972378-17972397 None:intergenic 50.0%
ACTAGCAACTGCCAGTCACT+AGG + chr1_1:17972379-17972398 None:intergenic 50.0%
!! AGCTTGCGGGGGAGTATTAA+AGG + chr1_1:17972444-17972463 None:intergenic 50.0%
TCAGCAACCTTAACCTGTCC+AGG - chr1_1:17972542-17972561 Msa0011920:intron 50.0%
CAACGTTCCTGGACAGGTTA+AGG + chr1_1:17972552-17972571 None:intergenic 50.0%
CTTAACCTGTCCAGGAACGT+TGG - chr1_1:17972550-17972569 Msa0011920:intron 50.0%
CAGTCTCTCCTCTCTGAGTT+AGG + chr1_1:17972724-17972743 None:intergenic 50.0%
ATGCACCAGAAGTGGACCTA+CGG - chr1_1:17972866-17972885 Msa0011920:intron 50.0%
GGCCAATATAGAGAGAGGAG+AGG - chr1_1:17972924-17972943 Msa0011920:intron 50.0%
TAGGGATGGGTCTGACAAGA+AGG - chr1_1:17972947-17972966 Msa0011920:intron 50.0%
CATGGGAGAAGGAAGTGACT+TGG - chr1_1:17973189-17973208 Msa0011920:intron 50.0%
AGCCAAAACCAACATGCAGG+AGG + chr1_1:17973215-17973234 None:intergenic 50.0%
GGCACCTTGGACTATTTCCT+CGG + chr1_1:17973307-17973326 None:intergenic 50.0%
AGCTTGTCAAACCACGCTCT+AGG - chr1_1:17973517-17973536 Msa0011920:intron 50.0%
TTTGTGTGCTCGTATCCTGG+AGG - chr1_1:17973592-17973611 Msa0011920:intron 50.0%
TGTCACTCTTCCCTCCAACA+GGG + chr1_1:17973881-17973900 None:intergenic 50.0%
ATGTCACTCTTCCCTCCAAC+AGG + chr1_1:17973882-17973901 None:intergenic 50.0%
GGGAAGAGTGACATAAGTCC+AGG - chr1_1:17973888-17973907 Msa0011920:intron 50.0%
!!! TCCAGGCGTTGTTTTTCAGC+AGG - chr1_1:17973905-17973924 Msa0011920:intron 50.0%
!!! CCAGGCGTTGTTTTTCAGCA+GGG - chr1_1:17973906-17973925 Msa0011920:intron 50.0%
TGAATGCATTGCAGCAAGCC+AGG - chr1_1:17973939-17973958 Msa0011920:intron 50.0%
AGAGGAGGTCTCTTGTATGC+TGG - chr1_1:17974084-17974103 Msa0011920:intron 50.0%
!! GTTGGGATTGGTTCAGGGAT+AGG - chr1_1:17974117-17974136 Msa0011920:intron 50.0%
GGGATTGCTGTCAGTGATTC+AGG - chr1_1:17974162-17974181 Msa0011920:intron 50.0%
AGGAATGGGAACAGAACTGG+AGG - chr1_1:17974182-17974201 Msa0011920:intron 50.0%
CTGGAGGATGACGATGAGTT+TGG - chr1_1:17974198-17974217 Msa0011920:intron 50.0%
GGAGGTGAATTGTGAGAAGG+TGG - chr1_1:17974255-17974274 Msa0011920:three_prime_UTR 50.0%
GAAGCAATGGGAATAGCAGC+AGG - chr1_1:17974318-17974337 Msa0011920:intron 50.0%
!! TCCGTTCCACCATGCCATTT+TGG - chr1_1:17974766-17974785 Msa0011920:intron 50.0%
CCATCACCAAAATGGCATGG+TGG + chr1_1:17974775-17974794 None:intergenic 50.0%
!!! CCACCATGCCATTTTGGTGA+TGG - chr1_1:17974772-17974791 Msa0011920:intron 50.0%
CACCCATCACCAAAATGGCA+TGG + chr1_1:17974778-17974797 None:intergenic 50.0%
!!! TGCCATTTTGGTGATGGGTG+TGG - chr1_1:17974778-17974797 Msa0011920:intron 50.0%
!!! GCCATTTTGGTGATGGGTGT+GGG - chr1_1:17974779-17974798 Msa0011920:intron 50.0%
!!! CCATTTTGGTGATGGGTGTG+GGG - chr1_1:17974780-17974799 Msa0011920:intron 50.0%
TCTGATTGGGGAGGTGAGTT+AGG + chr1_1:17974856-17974875 None:intergenic 50.0%
TCCTAGTCTACTGTGCCAAG+TGG - chr1_1:17975228-17975247 Msa0011920:intron 50.0%
TCTACTGTGCCAAGTGGCAA+AGG - chr1_1:17975234-17975253 Msa0011920:intron 50.0%
GGTCTGCCAGTAATTTCCTC+TGG + chr1_1:17975631-17975650 None:intergenic 50.0%
CTGATCTGGACCCTCAAATG+GGG - chr1_1:17975672-17975691 Msa0011920:intron 50.0%
!! ACCAAAACCTCAGGCACTGA+TGG + chr1_1:17975791-17975810 None:intergenic 50.0%
!! TCAGTGCCTGAGGTTTTGGT+TGG - chr1_1:17975791-17975810 Msa0011920:intron 50.0%
TGCACTCCAACCAAAACCTC+AGG + chr1_1:17975800-17975819 None:intergenic 50.0%
TGGTTGGAGTGCACCAGTAA+AGG - chr1_1:17975807-17975826 Msa0011920:intron 50.0%
TTGGAGTGCACCAGTAAAGG+AGG - chr1_1:17975810-17975829 Msa0011920:intron 50.0%
TGGAGTGCACCAGTAAAGGA+GGG - chr1_1:17975811-17975830 Msa0011920:intron 50.0%
! GAGGGCATGAAATTCTGAGG+TGG - chr1_1:17975829-17975848 Msa0011920:intron 50.0%
TAGTGTGGCATGGACAAGGT+AGG - chr1_1:17975862-17975881 Msa0011920:intron 50.0%
CTCCATGGATCATAAGCCCA+GGG - chr1_1:17975921-17975940 Msa0011920:intron 50.0%
TTCCCTGGGCTTATGATCCA+TGG + chr1_1:17975926-17975945 None:intergenic 50.0%
CTAAGTCTTGACCTGTTCCC+TGG + chr1_1:17975941-17975960 None:intergenic 50.0%
!! GGTCAAGACTTAGCTTGCCA+TGG - chr1_1:17975948-17975967 Msa0011920:intron 50.0%
! CATGAATCCAGTACCGGAAC+AGG + chr1_1:17975999-17976018 None:intergenic 50.0%
! GTTCCGGTACTGGATTCATG+AGG - chr1_1:17975999-17976018 Msa0011920:intron 50.0%
TGGCCTCATGAATCCAGTAC+CGG + chr1_1:17976005-17976024 None:intergenic 50.0%
GTACTGGATTCATGAGGCCA+GGG - chr1_1:17976005-17976024 Msa0011920:intron 50.0%
TGTGCTTCCATAGGCACAGT+AGG - chr1_1:17976054-17976073 Msa0011920:intron 50.0%
GTTCAACCTGCTGGCATCAA+AGG - chr1_1:17976405-17976424 Msa0011920:three_prime_UTR 50.0%
CTATCTCCTTTGATGCCAGC+AGG + chr1_1:17976414-17976433 None:intergenic 50.0%
AGAAGACGACATTGATCCGG+TGG + chr1_1:17976561-17976580 None:intergenic 50.0%
CTGGCAACTGTCAGTCACTA+GGG + chr1_1:17976758-17976777 None:intergenic 50.0%
ACTGGCAACTGTCAGTCACT+AGG + chr1_1:17976759-17976778 None:intergenic 50.0%
CAACCCCACTAAAACAAGCG+CGG - chr1_1:17977098-17977117 Msa0011920:intron 50.0%
! ACAAGCGCGGATTATTCGCA+AGG - chr1_1:17977111-17977130 Msa0011920:intron 50.0%
! ATGTTGCAGGGTATCCAGAC+CGG - chr1_1:17977222-17977241 Msa0011920:intron 50.0%
CGCTGTCTGCAAACAAACTG+TGG + chr1_1:17977272-17977291 None:intergenic 50.0%
GGCACAACACTTGGATGTTG+TGG + chr1_1:17977444-17977463 None:intergenic 50.0%
TGAGAACTACCTCGAGACCA+AGG + chr1_1:17977738-17977757 None:intergenic 50.0%
GTCTCGAGGTAGTTCTCAGT+CGG - chr1_1:17977740-17977759 Msa0011920:intron 50.0%
CTCAGTCGGAGAATGTTCGA+TGG - chr1_1:17977754-17977773 Msa0011920:intron 50.0%
!! ATAAGGCACCGAGTGTTGAC+AGG + chr1_1:17977839-17977858 None:intergenic 50.0%
ACTGCTTTGGTGAGCAAACC+TGG + chr1_1:17977997-17978016 None:intergenic 50.0%
TTCTGTGGTCCAGCATAAGG+GGG - chr1_1:17978269-17978288 Msa0011920:intron 50.0%
GCAGACATGGCAAGAACATG+TGG + chr1_1:17978721-17978740 None:intergenic 50.0%
AAGCAAGTGCAAGGGTCCTT+GGG + chr1_1:17978753-17978772 None:intergenic 50.0%
AAAGCAAGTGCAAGGGTCCT+TGG + chr1_1:17978754-17978773 None:intergenic 50.0%
!! ATGTTTAGTCTTGGGCGCGA+GGG - chr1_1:17979065-17979084 Msa0011920:three_prime_UTR 50.0%
GGCGTTCTACTTTCCACTAC+TGG + chr1_1:17979748-17979767 None:intergenic 50.0%
AATAGTGGCAGGACATGTCC+AGG - chr1_1:17979896-17979915 Msa0011920:intron 50.0%
CTGATGTAGAATGAGCCAGC+TGG + chr1_1:17980197-17980216 None:intergenic 50.0%
! CAGATAACCGACTTACCACC+AGG - chr1_1:17980422-17980441 Msa0011920:CDS 50.0%
! TAACCGACTTACCACCAGGA+AGG - chr1_1:17980426-17980445 Msa0011920:CDS 50.0%
TGAACAGGAATCCTTCCTGG+TGG + chr1_1:17980440-17980459 None:intergenic 50.0%
ACCATCGAGGGAAGTGACAA+AGG - chr1_1:17980467-17980486 Msa0011920:CDS 50.0%
! TCCTTTGTCACTTCCCTCGA+TGG + chr1_1:17980471-17980490 None:intergenic 50.0%
! GTTATCTCAGACCGGTTTCC+AGG - chr1_1:17981365-17981384 Msa0011920:intron 50.0%
TGGCCCAATTACACCAACTC+AGG - chr1_1:17981561-17981580 Msa0011920:intron 50.0%
GGCCCAATTACACCAACTCA+GGG - chr1_1:17981562-17981581 Msa0011920:intron 50.0%
GCCCAATTACACCAACTCAG+GGG - chr1_1:17981563-17981582 Msa0011920:intron 50.0%
!! GCCCCTGAGTTGGTGTAATT+GGG + chr1_1:17981567-17981586 None:intergenic 50.0%
TTCTTGCCAAGCAAGTCACC+AGG + chr1_1:17981725-17981744 None:intergenic 50.0%
!! ATTGCCGTCGACTTCCAATC+TGG + chr1_1:17981780-17981799 None:intergenic 50.0%
CCAAGCTCCAGTTTAAGTGC+AGG + chr1_1:17982553-17982572 None:intergenic 50.0%
CCTGCACTTAAACTGGAGCT+TGG - chr1_1:17982550-17982569 Msa0011920:intron 50.0%
CAATCACCTAGCAGGCAAAG+CGG + chr1_1:17982586-17982605 None:intergenic 50.0%
! AACCTCATGGGTTGACCTGG+TGG - chr1_1:17962013-17962032 Msa0011920:intron 55.0%
TATGCTCCTCTCGAGGTCTC+AGG - chr1_1:17962056-17962075 Msa0011920:intron 55.0%
TTTAACCGGACCCCTGCTAG+TGG - chr1_1:17962143-17962162 Msa0011920:intron 55.0%
ATCCCACCATCCACTAGCAG+GGG + chr1_1:17962156-17962175 None:intergenic 55.0%
! CCCCGAGATTAGTCAGCTCT+TGG - chr1_1:17962180-17962199 Msa0011920:intron 55.0%
!! TAGCTCTGACTCCCCTGCAA+CGG + chr1_1:17965278-17965297 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - chr1_1:17965990-17966009 Msa0011920:intron 55.0%
TACGGCGCCTTTCATCTCCT+TGG - chr1_1:17966457-17966476 Msa0011920:intron 55.0%
!!! GGGTTTTGGGGGGTTATGGA+GGG + chr1_1:17966864-17966883 None:intergenic 55.0%
!!! AGGGTTTTGGGGGGTTATGG+AGG + chr1_1:17966865-17966884 None:intergenic 55.0%
!!! TATTGGGGGAGGGTTTTGGG+GGG + chr1_1:17966874-17966893 None:intergenic 55.0%
!! GTATTGGGGGAGGGTTTTGG+GGG + chr1_1:17966875-17966894 None:intergenic 55.0%
GACATTGGGAATGGGAGGAG+AGG + chr1_1:17966963-17966982 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr1_1:17967033-17967052 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr1_1:17965990-17966009 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr1_1:17965989-17966008 None:intergenic 55.0%
TCGGGAGGGGATGTTGTTCT+AGG - chr1_1:17967210-17967229 Msa0011920:three_prime_UTR 55.0%
CCATAAGCCCTTGCAAGGGT+TGG + chr1_1:17967261-17967280 None:intergenic 55.0%
CCAACCCTTGCAAGGGCTTA+TGG - chr1_1:17967258-17967277 Msa0011920:three_prime_UTR 55.0%
ACCCTTGCAAGGGCTTATGG+TGG - chr1_1:17967261-17967280 Msa0011920:three_prime_UTR 55.0%
! TTGGGGTAGCCTTGAGTGCA+AGG + chr1_1:17968556-17968575 None:intergenic 55.0%
!! GAGGGGAGAGTGCTATCTTG+GGG + chr1_1:17968573-17968592 None:intergenic 55.0%
!! GTGAGGGGAGAGTGCTATCT+TGG + chr1_1:17968575-17968594 None:intergenic 55.0%
TCCACGAGTCCTAGCTCAAC+TGG + chr1_1:17969741-17969760 None:intergenic 55.0%
!! TGAGGCTTCCTTTTGGGAGG+AGG + chr1_1:17971583-17971602 None:intergenic 55.0%
!! CGGGTGGGTTGGACTGATAA+GGG + chr1_1:17972073-17972092 None:intergenic 55.0%
!! TCGGGTGGGTTGGACTGATA+AGG + chr1_1:17972074-17972093 None:intergenic 55.0%
TGGCAGTATAGGAGAGGAGG+GGG + chr1_1:17972178-17972197 None:intergenic 55.0%
AGCTAGAAGAGGAGACAGGG+AGG + chr1_1:17972228-17972247 None:intergenic 55.0%
GACACGTGTCAGTCAGCTAG+AGG + chr1_1:17972345-17972364 None:intergenic 55.0%
GCTGCAACACACAGTCAGCT+TGG - chr1_1:17972474-17972493 Msa0011920:intron 55.0%
TGTCTCCAACGTTCCTGGAC+AGG + chr1_1:17972558-17972577 None:intergenic 55.0%
ATTTGGCCAGCGCTAAGCTG+CGG - chr1_1:17972761-17972780 Msa0011920:three_prime_UTR 55.0%
TGAATACCGCAGCTTAGCGC+TGG + chr1_1:17972770-17972789 None:intergenic 55.0%
GATGACCGTAGGTCCACTTC+TGG + chr1_1:17972874-17972893 None:intergenic 55.0%
GAAGTGGACCTACGGTCATC+AGG - chr1_1:17972874-17972893 Msa0011920:intron 55.0%
GGTCAGATCCTGATGACCGT+AGG + chr1_1:17972885-17972904 None:intergenic 55.0%
CCTACTGTGATGCAGACTGG+GGG + chr1_1:17972906-17972925 None:intergenic 55.0%
GCCTACTGTGATGCAGACTG+GGG + chr1_1:17972907-17972926 None:intergenic 55.0%
GGCCTACTGTGATGCAGACT+GGG + chr1_1:17972908-17972927 None:intergenic 55.0%
TGGCCTACTGTGATGCAGAC+TGG + chr1_1:17972909-17972928 None:intergenic 55.0%
AGAGAGAGGAGAGGTAGGGA+TGG - chr1_1:17972933-17972952 Msa0011920:intron 55.0%
GAGAGAGGAGAGGTAGGGAT+GGG - chr1_1:17972934-17972953 Msa0011920:intron 55.0%
GTAGGATCTGAGAAAGGGGG+TGG - chr1_1:17973135-17973154 Msa0011920:intron 55.0%
! TGACTTGGCCTCCTGCATGT+TGG - chr1_1:17973204-17973223 Msa0011920:intron 55.0%
!!! GGCCTCCTGCATGTTGGTTT+TGG - chr1_1:17973210-17973229 Msa0011920:intron 55.0%
GGCTCTCTATGGCCTCAAAC+AGG + chr1_1:17973545-17973564 None:intergenic 55.0%
AAGGCACGTCTTGTGGCGAA+AGG + chr1_1:17973793-17973812 None:intergenic 55.0%
GGTCCCCGTTGGATGCAAAT+GGG + chr1_1:17973860-17973879 None:intergenic 55.0%
CCCTGCTGAAAAACAACGCC+TGG + chr1_1:17973909-17973928 None:intergenic 55.0%
CCCCACACCCATCACCAAAA+TGG + chr1_1:17974783-17974802 None:intergenic 55.0%
GCTGTGCAATCTGATTGGGG+AGG + chr1_1:17974865-17974884 None:intergenic 55.0%
GCCACTTGGCACAGTAGACT+AGG + chr1_1:17975232-17975251 None:intergenic 55.0%
TGATACGAGGCTCCAGAGTC+TGG - chr1_1:17975730-17975749 Msa0011920:intron 55.0%
GATACGAGGCTCCAGAGTCT+GGG - chr1_1:17975731-17975750 Msa0011920:intron 55.0%
GAGTTAGCCATCAGTGCCTG+AGG - chr1_1:17975781-17975800 Msa0011920:intron 55.0%
! GCCATCAGTGCCTGAGGTTT+TGG - chr1_1:17975787-17975806 Msa0011920:intron 55.0%
TGTGGCATGGACAAGGTAGG+AGG - chr1_1:17975865-17975884 Msa0011920:intron 55.0%
ATGGACAAGGTAGGAGGAGG+TGG - chr1_1:17975871-17975890 Msa0011920:intron 55.0%
TGGGGTCCAAAGTAGCTCCA+TGG - chr1_1:17975906-17975925 Msa0011920:intron 55.0%
GCTCCATGGATCATAAGCCC+AGG - chr1_1:17975920-17975939 Msa0011920:intron 55.0%
GGATCATAAGCCCAGGGAAC+AGG - chr1_1:17975927-17975946 Msa0011920:intron 55.0%
GCTTGCCATGGCATGAGAGA+TGG - chr1_1:17975960-17975979 Msa0011920:intron 55.0%
GTTGCTACCTGTTCCGGTAC+TGG - chr1_1:17975989-17976008 Msa0011920:intron 55.0%
! GGTACTGGATTCATGAGGCC+AGG - chr1_1:17976004-17976023 Msa0011920:intron 55.0%
CTACGAGCCTACTGTGCCTA+TGG + chr1_1:17976064-17976083 None:intergenic 55.0%
!! GATGGTTCTGGTGAGCTTGG+TGG + chr1_1:17976207-17976226 None:intergenic 55.0%
GATAGCGCAGCTACCGTCAA+CGG - chr1_1:17976488-17976507 Msa0011920:intron 55.0%
AAGGTTTGGGTGGAAGCCAC+CGG - chr1_1:17976542-17976561 Msa0011920:intron 55.0%
CTCGGCCTTACGTATTGCTG+TGG - chr1_1:17977299-17977318 Msa0011920:intron 55.0%
GGCCTTACGTATTGCTGTGG+TGG - chr1_1:17977302-17977321 Msa0011920:intron 55.0%
GTGGATGAGCAGCATCGCTT+TGG - chr1_1:17977321-17977340 Msa0011920:intron 55.0%
! TCCAGCATAAGGGGGAGTGT+TGG - chr1_1:17978277-17978296 Msa0011920:intron 55.0%
TCCAACACTCCCCCTTATGC+TGG + chr1_1:17978281-17978300 None:intergenic 55.0%
TGGGATGGGAGTAGCAGACA+TGG + chr1_1:17978734-17978753 None:intergenic 55.0%
TGTCTGCTACTCCCATCCCA+AGG - chr1_1:17978734-17978753 Msa0011920:intron 55.0%
AGTGCAAGGGTCCTTGGGAT+GGG + chr1_1:17978748-17978767 None:intergenic 55.0%
AAGTGCAAGGGTCCTTGGGA+TGG + chr1_1:17978749-17978768 None:intergenic 55.0%
!! GATGTTTAGTCTTGGGCGCG+AGG - chr1_1:17979064-17979083 Msa0011920:three_prime_UTR 55.0%
TGGAAACGGCAGCGGAATAG+TGG - chr1_1:17979881-17979900 Msa0011920:intron 55.0%
! AGAGTCTGGTTCGATCCTCC+TGG + chr1_1:17979917-17979936 None:intergenic 55.0%
CATCAATCACACGACCCTGG+TGG + chr1_1:17980749-17980768 None:intergenic 55.0%
GCACATCAATCACACGACCC+TGG + chr1_1:17980752-17980771 None:intergenic 55.0%
!! GGCCCCTGAGTTGGTGTAAT+TGG + chr1_1:17981568-17981587 None:intergenic 55.0%
AGACGCACATGTTGCTGCAC+TGG - chr1_1:17981808-17981827 Msa0011920:intron 55.0%
CACCACCAGGTCAACCCATG+AGG + chr1_1:17962018-17962037 None:intergenic 60.0%
! CTCGAGAGGAGCATAGACCG+AGG + chr1_1:17962051-17962070 None:intergenic 60.0%
CTCGGTCTATGCTCCTCTCG+AGG - chr1_1:17962049-17962068 Msa0011920:intron 60.0%
ACCATCCACTAGCAGGGGTC+CGG + chr1_1:17962151-17962170 None:intergenic 60.0%
! GACCCCTGCTAGTGGATGGT+GGG - chr1_1:17962151-17962170 Msa0011920:intron 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG - chr1_1:17965995-17966014 Msa0011920:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr1_1:17965996-17966015 Msa0011920:intron 60.0%
GGCGCTATAGCGGCCAATAG+CGG - chr1_1:17966199-17966218 Msa0011920:intron 60.0%
!!! GGGAGGGTTTTGGGGGGTTA+TGG + chr1_1:17966868-17966887 None:intergenic 60.0%
! ATGGGAGGAGAGGGCTTTGG+AGG + chr1_1:17966953-17966972 None:intergenic 60.0%
GGAATGGGAGGAGAGGGCTT+TGG + chr1_1:17966956-17966975 None:intergenic 60.0%
GCCAGTTGAGCTAGGACTCG+TGG - chr1_1:17969737-17969756 Msa0011920:intron 60.0%
TAGGAGAGGAGGGGGGATTG+AGG + chr1_1:17972170-17972189 None:intergenic 60.0%
GGCAGTATAGGAGAGGAGGG+GGG + chr1_1:17972177-17972196 None:intergenic 60.0%
AGAAGAGGAGACAGGGAGGC+AGG + chr1_1:17972224-17972243 None:intergenic 60.0%
TCCCCCGCAAGCTAGACTGT+GGG - chr1_1:17972451-17972470 Msa0011920:intron 60.0%
! AGCCCCACAGTCTAGCTTGC+GGG + chr1_1:17972457-17972476 None:intergenic 60.0%
! CAGCCCCACAGTCTAGCTTG+CGG + chr1_1:17972458-17972477 None:intergenic 60.0%
CCCCCAGTCTGCATCACAGT+AGG - chr1_1:17972903-17972922 Msa0011920:intron 60.0%
TCAAACAGGCGCCTAGAGCG+TGG + chr1_1:17973531-17973550 None:intergenic 60.0%
! ACGCTCTAGGCGCCTGTTTG+AGG - chr1_1:17973530-17973549 Msa0011920:intron 60.0%
TGTGCTCGTATCCTGGAGGC+TGG - chr1_1:17973596-17973615 Msa0011920:intron 60.0%
GTGCTCGTATCCTGGAGGCT+GGG - chr1_1:17973597-17973616 Msa0011920:intron 60.0%
GTCTACATGACCCAGCCTCC+AGG + chr1_1:17973610-17973629 None:intergenic 60.0%
GGGTCCCCGTTGGATGCAAA+TGG + chr1_1:17973861-17973880 None:intergenic 60.0%
GGCATGGACAAGGTAGGAGG+AGG - chr1_1:17975868-17975887 Msa0011920:intron 60.0%
GAGGTGGCATACCACGAGGT+GGG - chr1_1:17975887-17975906 Msa0011920:intron 60.0%
AGGTGGCATACCACGAGGTG+GGG - chr1_1:17975888-17975907 Msa0011920:intron 60.0%
CTACTTTGGACCCCACCTCG+TGG + chr1_1:17975901-17975920 None:intergenic 60.0%
GGATTCATGAGGCCAGGGAG+AGG - chr1_1:17976010-17976029 Msa0011920:intron 60.0%
TGAGGCCAGGGAGAGGATGA+AGG - chr1_1:17976017-17976036 Msa0011920:intron 60.0%
GAGGCCAGGGAGAGGATGAA+GGG - chr1_1:17976018-17976037 Msa0011920:intron 60.0%
AGGCCAGGGAGAGGATGAAG+GGG - chr1_1:17976019-17976038 Msa0011920:intron 60.0%
GTACAGAACTCCGGCCACCA+CGG - chr1_1:17976148-17976167 Msa0011920:intron 60.0%
TGTTGTGGAGGGAACCGGCA+AGG - chr1_1:17976523-17976542 Msa0011920:intron 60.0%
TGGAGGGAACCGGCAAGGTT+TGG - chr1_1:17976528-17976547 Msa0011920:intron 60.0%
GGAGGGAACCGGCAAGGTTT+GGG - chr1_1:17976529-17976548 Msa0011920:intron 60.0%
GGCTTCCACCCAAACCTTGC+CGG + chr1_1:17976540-17976559 None:intergenic 60.0%
GACACGTGTCAGTCAGCCAG+AGG + chr1_1:17976725-17976744 None:intergenic 60.0%
GCTTGCACTCCTCAACGCTC+TGG - chr1_1:17979042-17979061 Msa0011920:three_prime_UTR 60.0%
! TTACATGGGGGCGCGTGTCA+TGG - chr1_1:17979274-17979293 Msa0011920:intron 60.0%
! GACTCATGGGGGGCATGTCA+TGG - chr1_1:17979317-17979336 Msa0011920:intron 60.0%
! GGGGGGCATGTCATGGATGT+TGG - chr1_1:17979324-17979343 Msa0011920:intron 60.0%
!! GTTTTAGCAACTGCGGCCGG+TGG - chr1_1:17979700-17979719 Msa0011920:intron 60.0%
GCTGGTCGTAGCGACGACAA+TGG - chr1_1:17979722-17979741 Msa0011920:intron 60.0%
GCGACGACAATGGCCAGTAG+TGG - chr1_1:17979732-17979751 Msa0011920:intron 60.0%
AACGGCAGCGGAATAGTGGC+AGG - chr1_1:17979885-17979904 Msa0011920:intron 60.0%
AGTGGCAGGACATGTCCAGG+AGG - chr1_1:17979899-17979918 Msa0011920:intron 60.0%
GCAGAAGCAGCACGAAGCTG+AGG + chr1_1:17981335-17981354 None:intergenic 60.0%
! GCCTTGTTCCGCGTCCAACT+CGG + chr1_1:17981589-17981608 None:intergenic 60.0%
!! CGTGGACCTGGTGACTTGCT+TGG - chr1_1:17981716-17981735 Msa0011920:intron 60.0%
! AGACAGCCGCTTTGCCTGCT+AGG - chr1_1:17982577-17982596 Msa0011920:intron 60.0%
ACCGGACCCCTGCTAGTGGA+TGG - chr1_1:17962147-17962166 Msa0011920:intron 65.0%
! GGACCCCTGCTAGTGGATGG+TGG - chr1_1:17962150-17962169 Msa0011920:intron 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG - chr1_1:17965994-17966013 Msa0011920:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - chr1_1:17965999-17966018 Msa0011920:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr1_1:17966000-17966019 Msa0011920:intron 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG - chr1_1:17966007-17966026 Msa0011920:intron 65.0%
GAAGGGAGGGGAGGGCTTTG+GGG - chr1_1:17966008-17966027 Msa0011920:intron 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG - chr1_1:17966009-17966028 Msa0011920:intron 65.0%
GCGGCCGCAACACTGCATAG+CGG - chr1_1:17966296-17966315 Msa0011920:intron 65.0%
! TAGCGGATAGCGGCGCGTAG+CGG + chr1_1:17966822-17966841 None:intergenic 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + chr1_1:17967028-17967047 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + chr1_1:17967029-17967048 None:intergenic 65.0%
GAGGAGACAGGGAGGCAGGA+GGG + chr1_1:17972220-17972239 None:intergenic 65.0%
AGAGGAGACAGGGAGGCAGG+AGG + chr1_1:17972221-17972240 None:intergenic 65.0%
CTCCCCCGCAAGCTAGACTG+TGG - chr1_1:17972450-17972469 Msa0011920:intron 65.0%
! CCCCACAGTCTAGCTTGCGG+GGG + chr1_1:17972455-17972474 None:intergenic 65.0%
CCCCCGCAAGCTAGACTGTG+GGG - chr1_1:17972452-17972471 Msa0011920:intron 65.0%
! GCCCCACAGTCTAGCTTGCG+GGG + chr1_1:17972456-17972475 None:intergenic 65.0%
GCATCCAACGGGGACCCTGT+TGG - chr1_1:17973864-17973883 Msa0011920:intron 65.0%
TCCAACGGGGACCCTGTTGG+AGG - chr1_1:17973867-17973886 Msa0011920:intron 65.0%
CCAACGGGGACCCTGTTGGA+GGG - chr1_1:17973868-17973887 Msa0011920:intron 65.0%
GGAGGAGGTGGCATACCACG+AGG - chr1_1:17975883-17975902 Msa0011920:intron 65.0%
GGAGGTGGCATACCACGAGG+TGG - chr1_1:17975886-17975905 Msa0011920:intron 65.0%
GGCCAGGGAGAGGATGAAGG+GGG - chr1_1:17976020-17976039 Msa0011920:intron 65.0%
GCCAGGGAGAGGATGAAGGG+GGG - chr1_1:17976021-17976040 Msa0011920:intron 65.0%
CCAGGGAGAGGATGAAGGGG+GGG - chr1_1:17976022-17976041 Msa0011920:intron 65.0%
! CTTGGTGGCTGCTCCACTCG+CGG + chr1_1:17976192-17976211 None:intergenic 65.0%
AGCGCAGCTACCGTCAACGG+TGG - chr1_1:17976491-17976510 Msa0011920:intron 65.0%
GCAGCTACCGTCAACGGTGG+AGG - chr1_1:17976494-17976513 Msa0011920:intron 65.0%
ACCGTCAACGGTGGAGGTCG+CGG - chr1_1:17976500-17976519 Msa0011920:intron 65.0%
ACCGCGACCTCCACCGTTGA+CGG + chr1_1:17976504-17976523 None:intergenic 65.0%
!! TGGAGGTCGCGGTGTTGTGG+AGG - chr1_1:17976511-17976530 Msa0011920:intron 65.0%
!! GGAGGTCGCGGTGTTGTGGA+GGG - chr1_1:17976512-17976531 Msa0011920:intron 65.0%
!! CGCGGTGTTGTGGAGGGAAC+CGG - chr1_1:17976518-17976537 Msa0011920:intron 65.0%
GGGAACCGGCAAGGTTTGGG+TGG - chr1_1:17976532-17976551 Msa0011920:intron 65.0%
TCGTCGCTACGACCAGCCAC+CGG + chr1_1:17979719-17979738 None:intergenic 65.0%
CACCAACTCAGGGGCCGAGT+TGG - chr1_1:17981572-17981591 Msa0011920:intron 65.0%
GTCCAACTCGGCCCCTGAGT+TGG + chr1_1:17981577-17981596 None:intergenic 65.0%
! GCCGAGTTGGACGCGGAACA+AGG - chr1_1:17981585-17981604 Msa0011920:intron 65.0%
GGGAAGGGAGGGGAGGGCTT+TGG - chr1_1:17966006-17966025 Msa0011920:intron 70.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG - chr1_1:17966010-17966029 Msa0011920:intron 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG - chr1_1:17966014-17966033 Msa0011920:intron 70.0%
CCAATAGCGGCCGCGCGATG+CGG - chr1_1:17966212-17966231 Msa0011920:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG + chr1_1:17967018-17967037 None:intergenic 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG + chr1_1:17967024-17967043 None:intergenic 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + chr1_1:17967025-17967044 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG + chr1_1:17967030-17967049 None:intergenic 70.0%
CCCTCCAACAGGGTCCCCGT+TGG + chr1_1:17973871-17973890 None:intergenic 70.0%
CCCCCCCTTCATCCTCTCCC+TGG + chr1_1:17976025-17976044 None:intergenic 70.0%
TCCACTCGCGGTGGTCGTGG+TGG + chr1_1:17976180-17976199 None:intergenic 70.0%
TGCTCCACTCGCGGTGGTCG+TGG + chr1_1:17976183-17976202 None:intergenic 70.0%
! CGGTGGAGGTCGCGGTGTTG+TGG - chr1_1:17976508-17976527 Msa0011920:intron 70.0%
TAGCAACTGCGGCCGGTGGC+TGG - chr1_1:17979704-17979723 Msa0011920:intron 70.0%
! CTCAGGGGCCGAGTTGGACG+CGG - chr1_1:17981578-17981597 Msa0011920:intron 70.0%
CCGCATCGCGCGGCCGCTAT+TGG + chr1_1:17966215-17966234 None:intergenic 75.0%
CGGTACCGCACCGCATCGCG+CGG + chr1_1:17966225-17966244 None:intergenic 75.0%
CGCGCGATGCGGTGCGGTAC+CGG - chr1_1:17966223-17966242 Msa0011920:intron 75.0%
GTGGCAGAGGCCGTGGTGGC+CGG + chr1_1:17976161-17976180 None:intergenic 75.0%
CGTGGTGGCAGAGGCCGTGG+TGG + chr1_1:17976165-17976184 None:intergenic 75.0%
GGTCGTGGTGGCAGAGGCCG+TGG + chr1_1:17976168-17976187 None:intergenic 75.0%
CGCGGTGGTCGTGGTGGCAG+AGG + chr1_1:17976174-17976193 None:intergenic 75.0%
GCCACCACGACCACCGCGAG+TGG - chr1_1:17976176-17976195 Msa0011920:intron 75.0%
GGTGGCTGCTCCACTCGCGG+TGG + chr1_1:17976189-17976208 None:intergenic 75.0%
! AGCGGCCGCGCGATGCGGTG+CGG - chr1_1:17966217-17966236 Msa0011920:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 17961686 17982857 17961686 ID=Msa0011920;Name=Msa0011920
chr1_1 mRNA 17961686 17982857 17961686 ID=Msa0011920-mRNA-1;Parent=Msa0011920;Name=Msa0011920-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.92|0.86|1|0.92|0.93|15|2509|302
chr1_1 exon 17961686 17962029 17961686 ID=Msa0011920-mRNA-1:exon:6553;Parent=Msa0011920-mRNA-1
chr1_1 exon 17962714 17963286 17962714 ID=Msa0011920-mRNA-1:exon:6552;Parent=Msa0011920-mRNA-1
chr1_1 exon 17964035 17964118 17964035 ID=Msa0011920-mRNA-1:exon:6551;Parent=Msa0011920-mRNA-1
chr1_1 exon 17965745 17965903 17965745 ID=Msa0011920-mRNA-1:exon:6550;Parent=Msa0011920-mRNA-1
chr1_1 exon 17967169 17967312 17967169 ID=Msa0011920-mRNA-1:exon:6549;Parent=Msa0011920-mRNA-1
chr1_1 exon 17967411 17967563 17967411 ID=Msa0011920-mRNA-1:exon:6548;Parent=Msa0011920-mRNA-1
chr1_1 exon 17972735 17972806 17972735 ID=Msa0011920-mRNA-1:exon:6547;Parent=Msa0011920-mRNA-1
chr1_1 exon 17973295 17973528 17973295 ID=Msa0011920-mRNA-1:exon:6546;Parent=Msa0011920-mRNA-1
chr1_1 exon 17974206 17974295 17974206 ID=Msa0011920-mRNA-1:exon:6545;Parent=Msa0011920-mRNA-1
chr1_1 exon 17975127 17975208 17975127 ID=Msa0011920-mRNA-1:exon:6544;Parent=Msa0011920-mRNA-1
chr1_1 exon 17976270 17976433 17976270 ID=Msa0011920-mRNA-1:exon:6543;Parent=Msa0011920-mRNA-1
chr1_1 exon 17979031 17979259 17979031 ID=Msa0011920-mRNA-1:exon:6542;Parent=Msa0011920-mRNA-1
chr1_1 exon 17980079 17980853 17980079 ID=Msa0011920-mRNA-1:exon:6541;Parent=Msa0011920-mRNA-1
chr1_1 exon 17981918 17982019 17981918 ID=Msa0011920-mRNA-1:exon:6540;Parent=Msa0011920-mRNA-1
chr1_1 exon 17982645 17982857 17982645 ID=Msa0011920-mRNA-1:exon:6539;Parent=Msa0011920-mRNA-1
chr1_1 CDS 17982645 17982857 17982645 ID=Msa0011920-mRNA-1:cds;Parent=Msa0011920-mRNA-1
chr1_1 CDS 17981918 17982019 17981918 ID=Msa0011920-mRNA-1:cds;Parent=Msa0011920-mRNA-1
chr1_1 CDS 17980260 17980853 17980260 ID=Msa0011920-mRNA-1:cds;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17980079 17980259 17980079 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17979031 17979259 17979031 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17976270 17976433 17976270 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17975127 17975208 17975127 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17974206 17974295 17974206 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17973295 17973528 17973295 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17972735 17972806 17972735 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17967411 17967563 17967411 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17967169 17967312 17967169 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17965745 17965903 17965745 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17964035 17964118 17964035 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17962714 17963286 17962714 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
chr1_1 three_prime_UTR 17961686 17962029 17961686 ID=Msa0011920-mRNA-1:three_prime_utr;Parent=Msa0011920-mRNA-1
Gene Sequence

>Msa0011920

ATGGTATCTTTATATCTTCATTTCATTGATGTTCTATATCCTGAAGTGATTCTTCAGTCTTTTCAGTGTATGAGTTGCAAGCAACTAAGAACTGTTATACTCTTCCAAGGAAAGACTGGTTATTCAAACCCTTTCTGCACTAAAATGAGGTATAATATTGCTTATTCTTCTCATTTCATCACTCTTAGCCTAATTATCACTAGCGCGAAAACGTTTTCGAAAATGTGTTACCGGATGAAGCATAAATTTACAGACCAGAAGGTTGTTGAAATAGACCAGCATGGTGTAAAGAGCACTGTAAAGTTGCGTAAGAAGGTATTTGCTCTTATGGATCATAACATCCCTGATCTAATTGGAAATGGAAGCCGTGAAATGAAATCTAAAATGAATCGGAAAGATACAGTAGATGATTACGACATCTCCTTGATGTGTAGGATATTTCCATCAATTACTTTGGGTAGTGCTCCTCAAGTGGGTTTGTATGATGGGACCACAACATATTCTGAAACAAATATCATTTCGGCAACCAAAGATTTTAAACAACATTTATACGATTCTTCAGAGGTAAGAGAGGTGCAAAATACCGTCTCTGAAGCATCACCTTCTTTGTATGTCAATCCTTCTAGTTTAACATCTTCACCATTACGAAAAGATGATTCTTTTCCTTGTCCTTTAACACCTCAATCAATGTCTTCAATATATGAGGAAAAATTGGATCAAGTTACTAGGGAAGATTCTCAAAAGAAAGTGGGGCTGCAGTCACAGTCAAACCTTACACTTAATGAGTTATCTCTCGACACATCTGTCAATTGCTTACCTGGATTAACTAAGAAGCAACGTGAGCAACTAGATAACTGTGGGTTTCACACGGTGGGTACCAAAAACTGCCGCCTTTTGGAATACATGTAG
Protein sequence

>Msa0011920

MVSLYLHFIDVLYPEVILQSFQCMSCKQLRTVILFQGKTGYSNPFCTKMRYNIAYSSHFITLSLIITSAKTFSKMCYRMKHKFTDQKVVEIDQHGVKSTVKLRKKVFALMDHNIPDLIGNGSREMKSKMNRKDTVDDYDISLMCRIFPSITLGSAPQVGLYDGTTTYSETNIISATKDFKQHLYDSSEVREVQNTVSEASPSLYVNPSSLTSSPLRKDDSFPCPLTPQSMSSIYEEKLDQVTREDSQKKVGLQSQSNLTLNELSLDTSVNCLPGLTKKQREQLDNCGFHTVGTKNCRLLEYM*