Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1222140 | KAE9603504.1 | 81.232 | 357 | 31 | 4 | 1 | 356 | 1 | 322 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1222140 | sp|P26360|ATPG3_IPOBA | 75.350 | 357 | 56 | 4 | 1 | 356 | 1 | 326 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0620250 | Msa1222140 | 0.811142 | 8.117182e-51 | -8.615850e-47 |
| Msa1133010 | Msa1222140 | 0.824527 | 7.689758e-54 | -8.615850e-47 |
| Msa1222140 | Msa1334040 | 0.946073 | 9.244137e-105 | -8.615850e-47 |
| Msa0579800 | Msa1222140 | 0.807438 | 5.054975e-50 | -8.615850e-47 |
| Msa0880430 | Msa1222140 | 0.805513 | 1.287156e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1222140 | MtrunA17_Chr4g0073341 | 91.573 | 356 | 1 | 1 | 1 | 356 | 1 | 327 | 0.0 | 645 |
| Msa1222140 | MtrunA17_Chr2g0288451 | 27.750 | 400 | 192 | 14 | 17 | 354 | 9 | 373 | 1.77e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1222140 | AT2G33040.1 | 72.599 | 354 | 64 | 4 | 1 | 354 | 1 | 321 | 0.0 | 507 |
| Msa1222140 | AT4G04640.1 | 27.865 | 384 | 188 | 11 | 15 | 353 | 32 | 371 | 7.12e-26 | 107 |
Find 102 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTTGACCAGATATTTC+TGG | 0.183476 | 8_1:+86348831 | Msa1222140:three_prime_UTR |
| CGTTCTATTTCCACTCAAAT+TGG | 0.218648 | 8_1:+86344126 | Msa1222140:CDS |
| AACTCGCCTTGGGGATTTCT+TGG | 0.218664 | 8_1:+86348813 | Msa1222140:three_prime_UTR |
| AAACGATTATTATTATAAAA+AGG | 0.224110 | 8_1:-86348782 | None:intergenic |
| CAAAGGCCAATAGTTATTAT+TGG | 0.237572 | 8_1:-86348923 | None:intergenic |
| ACATACTTTGTCTCTTTATC+AGG | 0.264351 | 8_1:-86345244 | None:intergenic |
| GCCTTGAGCAAGTTGAATTC+TGG | 0.280287 | 8_1:+86344935 | Msa1222140:CDS |
| TGCAGAGATCAATCTTCTAT+TGG | 0.301364 | 8_1:+86344096 | Msa1222140:intron |
| TTATTTCCAATAATAACTAT+TGG | 0.339761 | 8_1:+86348917 | Msa1222140:three_prime_UTR |
| TGGTTTGTGGCAGCCATTTA+CGG | 0.342195 | 8_1:+86344393 | Msa1222140:CDS |
| AGAGACAAAGTATGTCATAT+TGG | 0.347992 | 8_1:+86345252 | Msa1222140:CDS |
| AGTGGTGTTGATTGGTGGTT+GGG | 0.356057 | 8_1:-86343968 | None:intergenic |
| TTGTACGTACGCAAGAAAAC+TGG | 0.369183 | 8_1:-86346402 | None:intergenic |
| GTCTGACCCTCACTTATAAT+AGG | 0.386053 | 8_1:+86348433 | Msa1222140:CDS |
| TTCAAGGCGAAACTCGCCTT+GGG | 0.387468 | 8_1:+86348803 | Msa1222140:three_prime_UTR |
| CCAAACCTATTTGCTACTAT+AGG | 0.389570 | 8_1:+86345220 | Msa1222140:CDS |
| GAGACAAAGTATGTCATATT+GGG | 0.404543 | 8_1:+86345253 | Msa1222140:CDS |
| TCACCGAGAAGAGCCGTAAA+TGG | 0.407251 | 8_1:-86344406 | None:intergenic |
| CAGGTCCTATAGTAGCAAAT+AGG | 0.408714 | 8_1:-86345225 | None:intergenic |
| CAGCCATTTACGGCTCTTCT+CGG | 0.412957 | 8_1:+86344403 | Msa1222140:CDS |
| TTATAATAATAATCGTTTCA+AGG | 0.413740 | 8_1:+86348787 | Msa1222140:three_prime_UTR |
| TTGTAGGTGTTATTTGGGCA+AGG | 0.419437 | 8_1:-86348997 | None:intergenic |
| CTGAAAATTCACGTGGTTTG+TGG | 0.419923 | 8_1:+86344380 | Msa1222140:CDS |
| TGAGATTCTGGTAATGGTAA+TGG | 0.420483 | 8_1:+86345195 | Msa1222140:CDS |
| AAAACAATTCCAGAAATATC+TGG | 0.429809 | 8_1:-86348840 | None:intergenic |
| GACAGCTCTAGCAGGAATGC+TGG | 0.431443 | 8_1:+86348396 | Msa1222140:CDS |
| TGGAGGAAGTCTCGGTGAAC+TGG | 0.443236 | 8_1:+86346318 | Msa1222140:CDS |
| CCTTGCTCCTTGCTCACTGC+AGG | 0.446628 | 8_1:-86348361 | None:intergenic |
| GAATTGATTGAGATTATCTC+TGG | 0.446916 | 8_1:+86348635 | Msa1222140:CDS |
| CCTATAGTAGCAAATAGGTT+TGG | 0.452616 | 8_1:-86345220 | None:intergenic |
| TGTAGGTGTTATTTGGGCAA+GGG | 0.459087 | 8_1:-86348996 | None:intergenic |
| TTGTTTGTGCAGTGAGAAAT+CGG | 0.465696 | 8_1:+86344272 | Msa1222140:intron |
| ATGACGATATTGAGATATAT+CGG | 0.467507 | 8_1:+86348714 | Msa1222140:three_prime_UTR |
| TCTTCAGACAAAGGTCTTTG+TGG | 0.469713 | 8_1:+86344878 | Msa1222140:CDS |
| GATCGGAGAGTGGTGTTGAT+TGG | 0.474940 | 8_1:-86343976 | None:intergenic |
| GAGTGGTGTTGATTGGTGGT+TGG | 0.475949 | 8_1:-86343969 | None:intergenic |
| GTCATTGTCAAATATAATAC+AGG | 0.476926 | 8_1:-86348696 | None:intergenic |
| AAGACCTTTGTCTGAAGAAA+CGG | 0.482952 | 8_1:-86344873 | None:intergenic |
| CTGGATTCGTATGAGATTGA+AGG | 0.483416 | 8_1:+86346337 | Msa1222140:CDS |
| CGATATTGAGATATATCGGT+TGG | 0.487663 | 8_1:+86348718 | Msa1222140:three_prime_UTR |
| CTCGAACTGTTATTTACTTG+TGG | 0.488869 | 8_1:+86348949 | Msa1222140:three_prime_UTR |
| CCACGTCTGTCAAGATAAGC+AGG | 0.495862 | 8_1:+86344912 | Msa1222140:CDS |
| AGAGATCAATCTTCTATTGG+AGG | 0.496751 | 8_1:+86344099 | Msa1222140:intron |
| TGCTTAACTCTTCAATGAGA+AGG | 0.497288 | 8_1:-86343769 | None:intergenic |
| ACAGCTCTAGCAGGAATGCT+GGG | 0.501839 | 8_1:+86348397 | Msa1222140:CDS |
| CATGTAGATTGTTGAAAGAG+AGG | 0.506420 | 8_1:+86346288 | Msa1222140:intron |
| GTTGAAAGAGAGGCTGAAGC+TGG | 0.508534 | 8_1:+86346298 | Msa1222140:CDS |
| CGGAGAGTGGTGTTGATTGG+TGG | 0.512550 | 8_1:-86343973 | None:intergenic |
| TTTCAAGGCGAAACTCGCCT+TGG | 0.515735 | 8_1:+86348802 | Msa1222140:three_prime_UTR |
| AACTACGTGCTGTTCAAACC+AGG | 0.516036 | 8_1:+86344356 | Msa1222140:CDS |
| GATGAGAGGAGATCGGAGAG+TGG | 0.516462 | 8_1:-86343986 | None:intergenic |
| CTGCCATGGACAGCTCTAGC+AGG | 0.525991 | 8_1:+86348388 | Msa1222140:CDS |
| GAATATTCAGAAAATTACTA+AGG | 0.532506 | 8_1:+86344309 | Msa1222140:CDS |
| GCTGAAGCTGGAGGAAGTCT+CGG | 0.540570 | 8_1:+86346310 | Msa1222140:CDS |
| TCTGGAGCATCAGCACTGAC+AGG | 0.540615 | 8_1:+86348653 | Msa1222140:CDS |
| GCTGCTGCACTCCGACGCGA+AGG | 0.542082 | 8_1:+86343919 | Msa1222140:CDS |
| AATTACTAAGGCTATGAAGA+TGG | 0.542804 | 8_1:+86344321 | Msa1222140:CDS |
| TGTTGCTAGTAGTGAAATGA+AGG | 0.545444 | 8_1:-86343806 | None:intergenic |
| TGGATTCGTATGAGATTGAA+GGG | 0.556021 | 8_1:+86346338 | Msa1222140:CDS |
| AATGAAAGTACCAATTTGAG+TGG | 0.558490 | 8_1:-86344136 | None:intergenic |
| TCAGACAAAGGTCTTTGTGG+TGG | 0.558554 | 8_1:+86344881 | Msa1222140:CDS |
| GTATGTCATATTGGGAGAGA+AGG | 0.558989 | 8_1:+86345261 | Msa1222140:CDS |
| GCTTAACTCTTCAATGAGAA+GGG | 0.565107 | 8_1:-86343768 | None:intergenic |
| GAGAATGCCTGCAGTGAGCA+AGG | 0.566041 | 8_1:+86348354 | Msa1222140:CDS |
| AAAGATACCTATTATAAGTG+AGG | 0.568709 | 8_1:-86348440 | None:intergenic |
| CTGCTGCACTCCGACGCGAA+GGG | 0.583053 | 8_1:+86343920 | Msa1222140:CDS |
| AAGATACCTATTATAAGTGA+GGG | 0.587593 | 8_1:-86348439 | None:intergenic |
| GGTCATGTTCAATGCGGTGT+TGG | 0.590854 | 8_1:+86348332 | Msa1222140:intron |
| CGTTGTACAATTTCTACCAA+CGG | 0.590879 | 8_1:+86346044 | Msa1222140:CDS |
| GATAATCTCAATCAATTCAG+TGG | 0.592679 | 8_1:-86348630 | None:intergenic |
| AGGAGCAAGGATGTCTGCCA+TGG | 0.594950 | 8_1:+86348374 | Msa1222140:CDS |
| AGGGAGAGATGAGAGGAGAT+CGG | 0.599654 | 8_1:-86343993 | None:intergenic |
| ACGAAAGAATCTCAAATCGA+TGG | 0.600840 | 8_1:+86343891 | Msa1222140:exon |
| GAATCTCAAATCGATGGCGA+TGG | 0.602234 | 8_1:+86343897 | Msa1222140:exon |
| AATAACAGTTCGAGAAACAA+AGG | 0.603461 | 8_1:-86348940 | None:intergenic |
| GAATCCTCTGAATTATACTC+AGG | 0.606536 | 8_1:+86345348 | Msa1222140:CDS |
| ATTACCGTTTCTTCAGACAA+AGG | 0.610426 | 8_1:+86344869 | Msa1222140:CDS |
| ACGAACAAGGGAGAGATGAG+AGG | 0.612203 | 8_1:-86344000 | None:intergenic |
| ATTCCTGCTAGAGCTGTCCA+TGG | 0.613830 | 8_1:-86348391 | None:intergenic |
| GAAAGAGAGGCTGAAGCTGG+AGG | 0.621120 | 8_1:+86346301 | Msa1222140:CDS |
| CCTGCAGTGAGCAAGGAGCA+AGG | 0.624108 | 8_1:+86348361 | Msa1222140:CDS |
| CTAACCTGAGTATAATTCAG+AGG | 0.633689 | 8_1:-86345352 | None:intergenic |
| TCGCTGAGAGAGAGAAAGAG+AGG | 0.639910 | 8_1:-86343865 | None:intergenic |
| CAGCTCTAGCAGGAATGCTG+GGG | 0.652373 | 8_1:+86348398 | Msa1222140:CDS |
| CATATTGGGAGAGAAGGCTA+AGG | 0.655816 | 8_1:+86345267 | Msa1222140:CDS |
| CCTGCTTATCTTGACAGACG+TGG | 0.656536 | 8_1:-86344912 | None:intergenic |
| ACCAGAATTCAACTTGCTCA+AGG | 0.662579 | 8_1:-86344936 | None:intergenic |
| TCAAGGCGAAACTCGCCTTG+GGG | 0.669714 | 8_1:+86348804 | Msa1222140:three_prime_UTR |
| TACGCAAGAAAACTGGAACT+CGG | 0.672354 | 8_1:-86346395 | None:intergenic |
| CACGTCTGTCAAGATAAGCA+GGG | 0.673248 | 8_1:+86344913 | Msa1222140:CDS |
| CTAAACGCTTCCCTTCGCGT+CGG | 0.678943 | 8_1:-86343930 | None:intergenic |
| ACCAGGGCTGAAAATTCACG+TGG | 0.682606 | 8_1:+86344373 | Msa1222140:CDS |
| GGTGGTTGGGAAGACATGAG+AGG | 0.683704 | 8_1:-86343955 | None:intergenic |
| GATAGTATAGTTGACACCGT+TGG | 0.683787 | 8_1:-86346060 | None:intergenic |
| GGATTCGTATGAGATTGAAG+GGG | 0.696951 | 8_1:+86346339 | Msa1222140:CDS |
| ACTACGTGCTGTTCAAACCA+GGG | 0.699734 | 8_1:+86344357 | Msa1222140:CDS |
| GATTCGTATGAGATTGAAGG+GGG | 0.707101 | 8_1:+86346340 | Msa1222140:CDS |
| CGTTGGTAGAAATTGTACAA+CGG | 0.712891 | 8_1:-86346043 | None:intergenic |
| GGTCAACCAAGAAATCCCCA+AGG | 0.723576 | 8_1:-86348819 | None:intergenic |
| TATATAGGTCATGTTCAATG+CGG | 0.738383 | 8_1:+86348326 | Msa1222140:intron |
| AATAGATGAAAGTACCTCGG+GGG | 0.741176 | 8_1:-86346082 | None:intergenic |
| ACGTGGAGTATGATGCACTG+AGG | 0.781586 | 8_1:+86345998 | Msa1222140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAAAGAATAATAATTA+GGG | - | chr8_1:86344174-86344193 | None:intergenic | 10.0% |
| !! | AAATGAAAAGAATAATAATT+AGG | - | chr8_1:86344175-86344194 | None:intergenic | 10.0% |
| !! | AAACGATTATTATTATAAAA+AGG | - | chr8_1:86348785-86348804 | None:intergenic | 10.0% |
| !! | CAAATTGTAACAAAATAAAA+AGG | - | chr8_1:86344462-86344481 | None:intergenic | 15.0% |
| !!! | TCCTAAATTAAATTGTTTTA+AGG | + | chr8_1:86345427-86345446 | Msa1222140:intron | 15.0% |
| !!! | TCCTTAAAACAATTTAATTT+AGG | - | chr8_1:86345431-86345450 | None:intergenic | 15.0% |
| !! | TTAAGGAATATTGAAAAATA+TGG | + | chr8_1:86345444-86345463 | Msa1222140:intron | 15.0% |
| !!! | ATGTTTAAATAGCTTATTTT+GGG | - | chr8_1:86345823-86345842 | None:intergenic | 15.0% |
| !!! | AATGTTTAAATAGCTTATTT+TGG | - | chr8_1:86345824-86345843 | None:intergenic | 15.0% |
| !! | AACAATTAAAACTAAACAAT+GGG | - | chr8_1:86345937-86345956 | None:intergenic | 15.0% |
| !! | TTGAAATTATATACAACATT+CGG | + | chr8_1:86347515-86347534 | Msa1222140:intron | 15.0% |
| !!! | ATACTTTATTTGTTGTATAT+AGG | + | chr8_1:86348311-86348330 | Msa1222140:intron | 15.0% |
| !! | TTATAATAATAATCGTTTCA+AGG | + | chr8_1:86348787-86348806 | Msa1222140:three_prime_UTR | 15.0% |
| !! | TTATTTCCAATAATAACTAT+TGG | + | chr8_1:86348917-86348936 | Msa1222140:three_prime_UTR | 15.0% |
| !! | TGTTAGATTTATGATGAATT+AGG | + | chr8_1:86344207-86344226 | Msa1222140:intron | 20.0% |
| !!! | AATAAATTTTGACTGTGTTA+TGG | + | chr8_1:86344239-86344258 | Msa1222140:intron | 20.0% |
| !! | GAATATTCAGAAAATTACTA+AGG | + | chr8_1:86344309-86344328 | Msa1222140:CDS | 20.0% |
| !! | CGTTATCTTATAAACAATTT+AGG | - | chr8_1:86345141-86345160 | None:intergenic | 20.0% |
| !! | AGATATATATGTAAAACACA+AGG | - | chr8_1:86345512-86345531 | None:intergenic | 20.0% |
| !! | TTGAAAACAAAGTTTACAAT+TGG | + | chr8_1:86345531-86345550 | Msa1222140:intron | 20.0% |
| !! | TTCAATATTCAACAACAAAA+AGG | - | chr8_1:86345696-86345715 | None:intergenic | 20.0% |
| !! | TTCAATATTCAACAACAAAA+AGG | - | chr8_1:86345696-86345715 | None:intergenic | 20.0% |
| !!! | TGTTTAAATAGCTTATTTTG+GGG | - | chr8_1:86345822-86345841 | None:intergenic | 20.0% |
| !! | CAACAATTAAAACTAAACAA+TGG | - | chr8_1:86345938-86345957 | None:intergenic | 20.0% |
| !!! | GTTTTAATTGTTGTATTTTC+AGG | + | chr8_1:86345945-86345964 | Msa1222140:intron | 20.0% |
| !!! | TATTGCAAAATAAGTTTTCA+TGG | - | chr8_1:86346211-86346230 | None:intergenic | 20.0% |
| !!! | AAAACTTATTTTGCAATATC+AGG | + | chr8_1:86346213-86346232 | Msa1222140:intron | 20.0% |
| !! | TAGAATATAAAATGCTATCT+GGG | + | chr8_1:86346608-86346627 | Msa1222140:intron | 20.0% |
| !! | TTAAGATGATTATGATTTCA+TGG | + | chr8_1:86346804-86346823 | Msa1222140:intron | 20.0% |
| !! | TAACTAAGTATAAATAGGTA+CGG | - | chr8_1:86347085-86347104 | None:intergenic | 20.0% |
| !! | CGAAATAACTAAGTATAAAT+AGG | - | chr8_1:86347090-86347109 | None:intergenic | 20.0% |
| !!! | TTTTGATCAAAATAGTAGAA+GGG | + | chr8_1:86347168-86347187 | Msa1222140:intron | 20.0% |
| !!! | AATTTTAAAAAATGAAGGTC+CGG | - | chr8_1:86347286-86347305 | None:intergenic | 20.0% |
| !! | AAGTATAAAAGAAACGAAAA+AGG | - | chr8_1:86347778-86347797 | None:intergenic | 20.0% |
| !! | TTTATCATTATAAACTTGAC+AGG | - | chr8_1:86347985-86348004 | None:intergenic | 20.0% |
| !! | ATAAGTATAATTTGAAAGAG+AGG | - | chr8_1:86348285-86348304 | None:intergenic | 20.0% |
| !!! | TTTAGACAAAATTTTTGTTC+TGG | + | chr8_1:86348501-86348520 | Msa1222140:intron | 20.0% |
| ! | AGAACTGTATTAAAAAGCTA+GGG | + | chr8_1:86343840-86343859 | Msa1222140:five_prime_UTR | 25.0% |
| ! | GAAAAGGATTAAAGAGAAAA+TGG | - | chr8_1:86344050-86344069 | None:intergenic | 25.0% |
| ! | TTGTATGATTGTGCAATAAT+TGG | + | chr8_1:86344506-86344525 | Msa1222140:intron | 25.0% |
| ! | TCCTATTCATCAAAAATCAA+GGG | - | chr8_1:86344732-86344751 | None:intergenic | 25.0% |
| ! | TTCCTATTCATCAAAAATCA+AGG | - | chr8_1:86344733-86344752 | None:intergenic | 25.0% |
| !!! | ATATTTTGAGATTCTGGTAA+TGG | + | chr8_1:86345189-86345208 | Msa1222140:CDS | 25.0% |
| ! | CTAGATATATGTAAAACACA+AGG | - | chr8_1:86345394-86345413 | None:intergenic | 25.0% |
| !!! | TCCTGAATTAGTTTGTTATA+AGG | + | chr8_1:86345554-86345573 | Msa1222140:intron | 25.0% |
| ! | TCCTTATAACAAACTAATTC+AGG | - | chr8_1:86345558-86345577 | None:intergenic | 25.0% |
| !! | TTTTCTGACTGAATATAATG+TGG | + | chr8_1:86345624-86345643 | Msa1222140:intron | 25.0% |
| !!! | AAAAAGGTTTTAATGTCACT+GGG | - | chr8_1:86345680-86345699 | None:intergenic | 25.0% |
| !!! | GTTTAAATAGCTTATTTTGG+GGG | - | chr8_1:86345821-86345840 | None:intergenic | 25.0% |
| ! | AGCTATTTAAACATTCATTG+TGG | + | chr8_1:86345829-86345848 | Msa1222140:intron | 25.0% |
| !!! | TTTAATAGATGAAAGTACCT+CGG | - | chr8_1:86346088-86346107 | None:intergenic | 25.0% |
| ! | CTAATTCAAATTGACGAAAT+GGG | - | chr8_1:86346474-86346493 | None:intergenic | 25.0% |
| ! | ACTAATTCAAATTGACGAAA+TGG | - | chr8_1:86346475-86346494 | None:intergenic | 25.0% |
| !! | CAGATAGCATTTTATATTCT+AGG | - | chr8_1:86346609-86346628 | None:intergenic | 25.0% |
| ! | CTAGAATATAAAATGCTATC+TGG | + | chr8_1:86346607-86346626 | Msa1222140:intron | 25.0% |
| ! | AAAATTTGGTATAGAGAGTA+AGG | - | chr8_1:86346669-86346688 | None:intergenic | 25.0% |
| !!! | AAACTTGTTACAAAGTCAAT+AGG | - | chr8_1:86346771-86346790 | None:intergenic | 25.0% |
| ! | ATCATAATCATCTTAATGCA+AGG | - | chr8_1:86346800-86346819 | None:intergenic | 25.0% |
| ! | TGATATCACTTTACTTTCAA+AGG | + | chr8_1:86346865-86346884 | Msa1222140:intron | 25.0% |
| !! | TAGATATTTTCAAAACCACT+AGG | - | chr8_1:86346939-86346958 | None:intergenic | 25.0% |
| !! | GATCAAAAGCAAGATAATTT+TGG | - | chr8_1:86347156-86347175 | None:intergenic | 25.0% |
| !! | CTTTTGATCAAAATAGTAGA+AGG | + | chr8_1:86347167-86347186 | Msa1222140:intron | 25.0% |
| !!! | ATTTTAAAAAATGAAGGTCC+GGG | - | chr8_1:86347285-86347304 | None:intergenic | 25.0% |
| !!! | CGGCAAATTTTAAAAAATGA+AGG | - | chr8_1:86347291-86347310 | None:intergenic | 25.0% |
| !! | TTGTAGTTAGTTGATATTGT+TGG | + | chr8_1:86347569-86347588 | Msa1222140:intron | 25.0% |
| ! | ATTAGAGGATGCATATAATA+TGG | + | chr8_1:86347617-86347636 | Msa1222140:intron | 25.0% |
| ! | TTAGAGGATGCATATAATAT+GGG | + | chr8_1:86347618-86347637 | Msa1222140:intron | 25.0% |
| ! | ATAATATGGGTGAAGTAATA+AGG | + | chr8_1:86347631-86347650 | Msa1222140:intron | 25.0% |
| ! | TAATATGGGTGAAGTAATAA+GGG | + | chr8_1:86347632-86347651 | Msa1222140:intron | 25.0% |
| ! | CCAAATAAAACTATGTAGTT+GGG | - | chr8_1:86348071-86348090 | None:intergenic | 25.0% |
| ! | TCCAAATAAAACTATGTAGT+TGG | - | chr8_1:86348072-86348091 | None:intergenic | 25.0% |
| ! | AATCAATAAGCACAATATTC+AGG | - | chr8_1:86348183-86348202 | None:intergenic | 25.0% |
| ! | AAGATACCTATTATAAGTGA+GGG | - | chr8_1:86348442-86348461 | None:intergenic | 25.0% |
| ! | AAAGATACCTATTATAAGTG+AGG | - | chr8_1:86348443-86348462 | None:intergenic | 25.0% |
| ! | GTCATTGTCAAATATAATAC+AGG | - | chr8_1:86348699-86348718 | None:intergenic | 25.0% |
| ! | ATGACGATATTGAGATATAT+CGG | + | chr8_1:86348714-86348733 | Msa1222140:three_prime_UTR | 25.0% |
| !!! | TTGGTTTCTTTTGAAATTGT+TGG | + | chr8_1:86348737-86348756 | Msa1222140:three_prime_UTR | 25.0% |
| ! | AAAACAATTCCAGAAATATC+TGG | - | chr8_1:86348843-86348862 | None:intergenic | 25.0% |
| CAGAACTGTATTAAAAAGCT+AGG | + | chr8_1:86343839-86343858 | Msa1222140:five_prime_UTR | 30.0% | |
| AATGAAGAGGCTAATTGAAA+AGG | - | chr8_1:86344066-86344085 | None:intergenic | 30.0% | |
| GCAATAGAAATGAAATGAAG+AGG | - | chr8_1:86344079-86344098 | None:intergenic | 30.0% | |
| !! | AATGAAAGTACCAATTTGAG+TGG | - | chr8_1:86344139-86344158 | None:intergenic | 30.0% |
| AATTACTAAGGCTATGAAGA+TGG | + | chr8_1:86344321-86344340 | Msa1222140:CDS | 30.0% | |
| ! | ACCCTTGATTTTTGATGAAT+AGG | + | chr8_1:86344728-86344747 | Msa1222140:intron | 30.0% |
| ! | GGTTCCTTTTATATTCTTTC+AGG | + | chr8_1:86344821-86344840 | Msa1222140:intron | 30.0% |
| AACGCCTGAAAGAATATAAA+AGG | - | chr8_1:86344828-86344847 | None:intergenic | 30.0% | |
| AAATACAAGTGATGCAATTG+TGG | - | chr8_1:86345025-86345044 | None:intergenic | 30.0% | |
| TTGAAATTGCAGACAATTGT+GGG | - | chr8_1:86345049-86345068 | None:intergenic | 30.0% | |
| !!! | AAAGGTTCTAAATTTTGTCG+GGG | - | chr8_1:86345092-86345111 | None:intergenic | 30.0% |
| !!! | CAAAGGTTCTAAATTTTGTC+GGG | - | chr8_1:86345093-86345112 | None:intergenic | 30.0% |
| !!! | GCAAAGGTTCTAAATTTTGT+CGG | - | chr8_1:86345094-86345113 | None:intergenic | 30.0% |
| AACAGTATTTCACATTGCAA+AGG | - | chr8_1:86345110-86345129 | None:intergenic | 30.0% | |
| !!! | GCTGAAATATTTTGAGATTC+TGG | + | chr8_1:86345183-86345202 | Msa1222140:CDS | 30.0% |
| ACATACTTTGTCTCTTTATC+AGG | - | chr8_1:86345247-86345266 | None:intergenic | 30.0% | |
| AGAGACAAAGTATGTCATAT+TGG | + | chr8_1:86345252-86345271 | Msa1222140:CDS | 30.0% | |
| GAGACAAAGTATGTCATATT+GGG | + | chr8_1:86345253-86345272 | Msa1222140:CDS | 30.0% | |
| AATATGGACATTGCTCTTAA+TGG | + | chr8_1:86345460-86345479 | Msa1222140:intron | 30.0% | |
| !! | CAAAAAGGTTTTAATGTCAC+TGG | - | chr8_1:86345681-86345700 | None:intergenic | 30.0% |
| ATATTCAACAACAAAAAGGC+AGG | - | chr8_1:86345720-86345739 | None:intergenic | 30.0% | |
| CTAAACAATGGGTATATACT+CGG | - | chr8_1:86345926-86345945 | None:intergenic | 30.0% | |
| !! | TTAATAGATGAAAGTACCTC+GGG | - | chr8_1:86346087-86346106 | None:intergenic | 30.0% |
| GGGAAAAACTTCATTACAAT+AGG | - | chr8_1:86346126-86346145 | None:intergenic | 30.0% | |
| ! | ATTGTAATGAAGTTTTTCCC+AGG | + | chr8_1:86346126-86346145 | Msa1222140:intron | 30.0% |
| TTGACAATATTTCATGTCAG+GGG | - | chr8_1:86346153-86346172 | None:intergenic | 30.0% | |
| CTTGACAATATTTCATGTCA+GGG | - | chr8_1:86346154-86346173 | None:intergenic | 30.0% | |
| ACTTGACAATATTTCATGTC+AGG | - | chr8_1:86346155-86346174 | None:intergenic | 30.0% | |
| AGTATACAACAAAGTTTGTC+AGG | - | chr8_1:86346440-86346459 | None:intergenic | 30.0% | |
| ATTCAAAATATGACACTGCA+AGG | + | chr8_1:86346526-86346545 | Msa1222140:intron | 30.0% | |
| TAGAGGAAAGTGAGAAAATT+TGG | - | chr8_1:86346683-86346702 | None:intergenic | 30.0% | |
| GATGATTATGATTTCATGGA+TGG | + | chr8_1:86346808-86346827 | Msa1222140:intron | 30.0% | |
| AAGTATAAATAGGTACGGTT+CGG | - | chr8_1:86347080-86347099 | None:intergenic | 30.0% | |
| GAGTATATATGAACTCTGAA+TGG | - | chr8_1:86347471-86347490 | None:intergenic | 30.0% | |
| TATATACAACATTCGGTATC+TGG | + | chr8_1:86347522-86347541 | Msa1222140:intron | 30.0% | |
| GTTAGATAACTAGTTAGAGA+CGG | + | chr8_1:86347591-86347610 | Msa1222140:intron | 30.0% | |
| TTAGATAACTAGTTAGAGAC+GGG | + | chr8_1:86347592-86347611 | Msa1222140:intron | 30.0% | |
| AATATGGGTGAAGTAATAAG+GGG | + | chr8_1:86347633-86347652 | Msa1222140:intron | 30.0% | |
| GAAAATATGAACAACACTTG+AGG | - | chr8_1:86347703-86347722 | None:intergenic | 30.0% | |
| ACTGACCATTTAATTATGAG+AGG | + | chr8_1:86347837-86347856 | Msa1222140:intron | 30.0% | |
| CTGACCATTTAATTATGAGA+GGG | + | chr8_1:86347838-86347857 | Msa1222140:intron | 30.0% | |
| !!! | CCCAACTACATAGTTTTATT+TGG | + | chr8_1:86348068-86348087 | Msa1222140:intron | 30.0% |
| CTTGTTAACACAAAAGAATC+AGG | - | chr8_1:86348142-86348161 | None:intergenic | 30.0% | |
| CTCAATAAAAAAGCAGCAAA+AGG | - | chr8_1:86348222-86348241 | None:intergenic | 30.0% | |
| TATATAGGTCATGTTCAATG+CGG | + | chr8_1:86348326-86348345 | Msa1222140:intron | 30.0% | |
| AGTTACTGATGCAATTATAC+AGG | - | chr8_1:86348532-86348551 | None:intergenic | 30.0% | |
| GATAATCTCAATCAATTCAG+TGG | - | chr8_1:86348633-86348652 | None:intergenic | 30.0% | |
| GAATTGATTGAGATTATCTC+TGG | + | chr8_1:86348635-86348654 | Msa1222140:CDS | 30.0% | |
| !!! | GGAATTGTTTTTTGATGTTG+AGG | + | chr8_1:86348852-86348871 | Msa1222140:three_prime_UTR | 30.0% |
| CAAAGGCCAATAGTTATTAT+TGG | - | chr8_1:86348926-86348945 | None:intergenic | 30.0% | |
| AATAACAGTTCGAGAAACAA+AGG | - | chr8_1:86348943-86348962 | None:intergenic | 30.0% | |
| GCTTAACTCTTCAATGAGAA+GGG | - | chr8_1:86343771-86343790 | None:intergenic | 35.0% | |
| TGCTTAACTCTTCAATGAGA+AGG | - | chr8_1:86343772-86343791 | None:intergenic | 35.0% | |
| TGTTGCTAGTAGTGAAATGA+AGG | - | chr8_1:86343809-86343828 | None:intergenic | 35.0% | |
| ACGAAAGAATCTCAAATCGA+TGG | + | chr8_1:86343891-86343910 | Msa1222140:exon | 35.0% | |
| TGCAGAGATCAATCTTCTAT+TGG | + | chr8_1:86344096-86344115 | Msa1222140:intron | 35.0% | |
| AGAGATCAATCTTCTATTGG+AGG | + | chr8_1:86344099-86344118 | Msa1222140:intron | 35.0% | |
| CGTTCTATTTCCACTCAAAT+TGG | + | chr8_1:86344126-86344145 | Msa1222140:CDS | 35.0% | |
| TTGTTTGTGCAGTGAGAAAT+CGG | + | chr8_1:86344272-86344291 | Msa1222140:intron | 35.0% | |
| GACTGAAAACAAAGACTGAA+TGG | + | chr8_1:86344530-86344549 | Msa1222140:intron | 35.0% | |
| TTGATTGTAACCACACATGT+CGG | + | chr8_1:86344626-86344645 | Msa1222140:intron | 35.0% | |
| GAATGTGTGTCTAGTATTGT+TGG | - | chr8_1:86344677-86344696 | None:intergenic | 35.0% | |
| ! | ACACATTCAATCAGAAGTGT+GGG | + | chr8_1:86344689-86344708 | Msa1222140:intron | 35.0% |
| CATCAAAAATCAAGGGTGAA+GGG | - | chr8_1:86344725-86344744 | None:intergenic | 35.0% | |
| TCATCAAAAATCAAGGGTGA+AGG | - | chr8_1:86344726-86344745 | None:intergenic | 35.0% | |
| ATGAATAGGAATTGTCCACA+CGG | + | chr8_1:86344742-86344761 | Msa1222140:intron | 35.0% | |
| !! | TTTTGTGTCATTGCTCATTG+TGG | + | chr8_1:86344800-86344819 | Msa1222140:intron | 35.0% |
| ATTACCGTTTCTTCAGACAA+AGG | + | chr8_1:86344869-86344888 | Msa1222140:CDS | 35.0% | |
| AAGACCTTTGTCTGAAGAAA+CGG | - | chr8_1:86344876-86344895 | None:intergenic | 35.0% | |
| TTGTTGTCTGTGTATTGTGA+TGG | + | chr8_1:86344971-86344990 | Msa1222140:intron | 35.0% | |
| CTTGAAATTGCAGACAATTG+TGG | - | chr8_1:86345050-86345069 | None:intergenic | 35.0% | |
| CACAATTGTCTGCAATTTCA+AGG | + | chr8_1:86345048-86345067 | Msa1222140:intron | 35.0% | |
| !! | TGAGATTCTGGTAATGGTAA+TGG | + | chr8_1:86345195-86345214 | Msa1222140:CDS | 35.0% |
| CCTATAGTAGCAAATAGGTT+TGG | - | chr8_1:86345223-86345242 | None:intergenic | 35.0% | |
| ! | CCAAACCTATTTGCTACTAT+AGG | + | chr8_1:86345220-86345239 | Msa1222140:CDS | 35.0% |
| GAATCCTCTGAATTATACTC+AGG | + | chr8_1:86345348-86345367 | Msa1222140:CDS | 35.0% | |
| CTAACCTGAGTATAATTCAG+AGG | - | chr8_1:86345355-86345374 | None:intergenic | 35.0% | |
| AATATGAACGTCACTCTAAC+TGG | + | chr8_1:86345586-86345605 | Msa1222140:intron | 35.0% | |
| TCTGACTGAATATAATGTGG+TGG | + | chr8_1:86345627-86345646 | Msa1222140:intron | 35.0% | |
| ! | AAAACTGTTCAGCTTTTGTG+AGG | + | chr8_1:86345742-86345761 | Msa1222140:intron | 35.0% |
| !!! | GTATTTTCAGGTTTCTGTCT+TGG | + | chr8_1:86345957-86345976 | Msa1222140:intron | 35.0% |
| ! | TGATGACATTCTGAAAAACG+TGG | + | chr8_1:86345981-86346000 | Msa1222140:CDS | 35.0% |
| ! | CGTTGGTAGAAATTGTACAA+CGG | - | chr8_1:86346046-86346065 | None:intergenic | 35.0% |
| CGTTGTACAATTTCTACCAA+CGG | + | chr8_1:86346044-86346063 | Msa1222140:CDS | 35.0% | |
| !! | TAATAGATGAAAGTACCTCG+GGG | - | chr8_1:86346086-86346105 | None:intergenic | 35.0% |
| TATTGTCAAGTTTCGACGTT+TGG | + | chr8_1:86346164-86346183 | Msa1222140:intron | 35.0% | |
| TTACATCACACCATTGAAAC+AGG | - | chr8_1:86346259-86346278 | None:intergenic | 35.0% | |
| CATGTAGATTGTTGAAAGAG+AGG | + | chr8_1:86346288-86346307 | Msa1222140:intron | 35.0% | |
| TGGATTCGTATGAGATTGAA+GGG | + | chr8_1:86346338-86346357 | Msa1222140:CDS | 35.0% | |
| ! | TATAAAATGCTATCTGGGAC+CGG | + | chr8_1:86346613-86346632 | Msa1222140:intron | 35.0% |
| ! | GCTTAATTTGATCCCTGTTA+TGG | - | chr8_1:86346647-86346666 | None:intergenic | 35.0% |
| TATTTCCAAATAGCCAGGTA+GGG | - | chr8_1:86346713-86346732 | None:intergenic | 35.0% | |
| TTATTTCCAAATAGCCAGGT+AGG | - | chr8_1:86346714-86346733 | None:intergenic | 35.0% | |
| GGAATTATTTCCAAATAGCC+AGG | - | chr8_1:86346718-86346737 | None:intergenic | 35.0% | |
| GTTACAAAGTCAATAGGAAG+CGG | - | chr8_1:86346765-86346784 | None:intergenic | 35.0% | |
| !! | AAACTGCTCTAGAATGTTCT+TGG | - | chr8_1:86346845-86346864 | None:intergenic | 35.0% |
| !!! | CATGATTTGTTGTGACCTTT+TGG | + | chr8_1:86346976-86346995 | Msa1222140:intron | 35.0% |
| ! | CTTAGTTATTTCGTCGTAGT+TGG | + | chr8_1:86347097-86347116 | Msa1222140:intron | 35.0% |
| ! | ATGTTTTATACCAACGTACC+CGG | + | chr8_1:86347264-86347283 | Msa1222140:intron | 35.0% |
| TATGAACTCTGAATGGAATG+CGG | - | chr8_1:86347464-86347483 | None:intergenic | 35.0% | |
| CTCACATATAAGCTGTAAAG+TGG | + | chr8_1:86347488-86347507 | Msa1222140:intron | 35.0% | |
| CAAGCCCTCTCATAATTAAA+TGG | - | chr8_1:86347845-86347864 | None:intergenic | 35.0% | |
| GAAGAAAAGAAACACATCAC+TGG | + | chr8_1:86347899-86347918 | Msa1222140:intron | 35.0% | |
| TAAACACCTCTTATACTGCA+GGG | + | chr8_1:86347922-86347941 | Msa1222140:intron | 35.0% | |
| GGACATACCATAACATCAAA+AGG | + | chr8_1:86348089-86348108 | Msa1222140:intron | 35.0% | |
| AAAGAATCAGGAACAAGGTT+GGG | - | chr8_1:86348130-86348149 | None:intergenic | 35.0% | |
| AAAAGAATCAGGAACAAGGT+TGG | - | chr8_1:86348131-86348150 | None:intergenic | 35.0% | |
| ACACAAAAGAATCAGGAACA+AGG | - | chr8_1:86348135-86348154 | None:intergenic | 35.0% | |
| TTGAGAACTTTGACGTTTGA+AGG | + | chr8_1:86348254-86348273 | Msa1222140:intron | 35.0% | |
| ACTGATGCAATTATACAGGA+TGG | - | chr8_1:86348528-86348547 | None:intergenic | 35.0% | |
| ! | AGACTAGTCAGTGAAATCAT+AGG | - | chr8_1:86348570-86348589 | None:intergenic | 35.0% |
| CGATATTGAGATATATCGGT+TGG | + | chr8_1:86348718-86348737 | Msa1222140:three_prime_UTR | 35.0% | |
| ! | CTCGAACTGTTATTTACTTG+TGG | + | chr8_1:86348949-86348968 | Msa1222140:three_prime_UTR | 35.0% |
| GAGTGAGAAAGAACGAACAA+GGG | - | chr8_1:86344015-86344034 | None:intergenic | 40.0% | |
| AGAGTGAGAAAGAACGAACA+AGG | - | chr8_1:86344016-86344035 | None:intergenic | 40.0% | |
| CTGAAAATTCACGTGGTTTG+TGG | + | chr8_1:86344380-86344399 | Msa1222140:CDS | 40.0% | |
| CACACATTCAATCAGAAGTG+TGG | + | chr8_1:86344688-86344707 | Msa1222140:intron | 40.0% | |
| TCTTCAGACAAAGGTCTTTG+TGG | + | chr8_1:86344878-86344897 | Msa1222140:CDS | 40.0% | |
| ! | ACCAGAATTCAACTTGCTCA+AGG | - | chr8_1:86344939-86344958 | None:intergenic | 40.0% |
| AAGTGATGCAATTGTGGATG+TGG | - | chr8_1:86345019-86345038 | None:intergenic | 40.0% | |
| CAGGTCCTATAGTAGCAAAT+AGG | - | chr8_1:86345228-86345247 | None:intergenic | 40.0% | |
| GTATGTCATATTGGGAGAGA+AGG | + | chr8_1:86345261-86345280 | Msa1222140:CDS | 40.0% | |
| !! | GGTTTTAATGTCACTGGGTT+GGG | - | chr8_1:86345675-86345694 | None:intergenic | 40.0% |
| !! | AGGTTTTAATGTCACTGGGT+TGG | - | chr8_1:86345676-86345695 | None:intergenic | 40.0% |
| ! | TGCTTTCTTTGGCAGCTTTT+GGG | - | chr8_1:86345794-86345813 | None:intergenic | 40.0% |
| ! | ATGCTTTCTTTGGCAGCTTT+TGG | - | chr8_1:86345795-86345814 | None:intergenic | 40.0% |
| TTGGGGGAAAATGCTTTCTT+TGG | - | chr8_1:86345805-86345824 | None:intergenic | 40.0% | |
| GATAGTATAGTTGACACCGT+TGG | - | chr8_1:86346063-86346082 | None:intergenic | 40.0% | |
| !! | AATAGATGAAAGTACCTCGG+GGG | - | chr8_1:86346085-86346104 | None:intergenic | 40.0% |
| !! | GTGCTTTTTGCCTGTTTCAA+TGG | + | chr8_1:86346246-86346265 | Msa1222140:intron | 40.0% |
| CTGGATTCGTATGAGATTGA+AGG | + | chr8_1:86346337-86346356 | Msa1222140:CDS | 40.0% | |
| GGATTCGTATGAGATTGAAG+GGG | + | chr8_1:86346339-86346358 | Msa1222140:CDS | 40.0% | |
| GATTCGTATGAGATTGAAGG+GGG | + | chr8_1:86346340-86346359 | Msa1222140:CDS | 40.0% | |
| TACGCAAGAAAACTGGAACT+CGG | - | chr8_1:86346398-86346417 | None:intergenic | 40.0% | |
| TTGTACGTACGCAAGAAAAC+TGG | - | chr8_1:86346405-86346424 | None:intergenic | 40.0% | |
| TTAGTCTAATTGCCGTACGT+AGG | + | chr8_1:86346490-86346509 | Msa1222140:intron | 40.0% | |
| !! | TGATTCTGAAGTCCTACGTA+CGG | - | chr8_1:86346505-86346524 | None:intergenic | 40.0% |
| ! | ATAAAATGCTATCTGGGACC+GGG | + | chr8_1:86346614-86346633 | Msa1222140:intron | 40.0% |
| ATTTCCAAATAGCCAGGTAG+GGG | - | chr8_1:86346712-86346731 | None:intergenic | 40.0% | |
| ! | ACTTTCTCTCAGAGCATTCA+AGG | + | chr8_1:86346905-86346924 | Msa1222140:intron | 40.0% |
| TTCAAGGACATGTTACCTAG+TGG | + | chr8_1:86346921-86346940 | Msa1222140:intron | 40.0% | |
| !! | GTTGTGACCTTTTGGTTACT+AGG | + | chr8_1:86346984-86347003 | Msa1222140:intron | 40.0% |
| AGAGCTTCCTAGTAACCAAA+AGG | - | chr8_1:86346994-86347013 | None:intergenic | 40.0% | |
| TTGGTGCAGCAAAAACGTAA+GGG | + | chr8_1:86347116-86347135 | Msa1222140:intron | 40.0% | |
| AAATTTGCCGTATTACGCAC+CGG | + | chr8_1:86347301-86347320 | Msa1222140:intron | 40.0% | |
| TAGCTATGATGCATAGGTAC+GGG | - | chr8_1:86347353-86347372 | None:intergenic | 40.0% | |
| CTAGCTATGATGCATAGGTA+CGG | - | chr8_1:86347354-86347373 | None:intergenic | 40.0% | |
| TATGCATCATAGCTAGGAAG+CGG | + | chr8_1:86347358-86347377 | Msa1222140:intron | 40.0% | |
| CTTCTCTTGATGCTTTCTCT+CGG | - | chr8_1:86347403-86347422 | None:intergenic | 40.0% | |
| !! | GAGAGAAAGCATCAAGAGAA+GGG | + | chr8_1:86347402-86347421 | Msa1222140:intron | 40.0% |
| AGTTAGAGACGGGAAATTAG+AGG | + | chr8_1:86347602-86347621 | Msa1222140:intron | 40.0% | |
| !!! | AGGGGTTTTGTTCTGTAGTT+TGG | + | chr8_1:86347651-86347670 | Msa1222140:intron | 40.0% |
| !!! | GGGGTTTTGTTCTGTAGTTT+GGG | + | chr8_1:86347652-86347671 | Msa1222140:intron | 40.0% |
| GTAAACACCTCTTATACTGC+AGG | + | chr8_1:86347921-86347940 | Msa1222140:intron | 40.0% | |
| ! | CTATGTAGTTGGGAGTGTAA+TGG | - | chr8_1:86348061-86348080 | None:intergenic | 40.0% |
| ! | AGATGGGCCTTTTGATGTTA+TGG | - | chr8_1:86348099-86348118 | None:intergenic | 40.0% |
| GTCTGACCCTCACTTATAAT+AGG | + | chr8_1:86348433-86348452 | Msa1222140:CDS | 40.0% | |
| CTTGGTTGACCAGATATTTC+TGG | + | chr8_1:86348831-86348850 | Msa1222140:three_prime_UTR | 40.0% | |
| GAATCTCAAATCGATGGCGA+TGG | + | chr8_1:86343897-86343916 | Msa1222140:exon | 45.0% | |
| !! | AGTGGTGTTGATTGGTGGTT+GGG | - | chr8_1:86343971-86343990 | None:intergenic | 45.0% |
| ! | AACTACGTGCTGTTCAAACC+AGG | + | chr8_1:86344356-86344375 | Msa1222140:CDS | 45.0% |
| ! | ACTACGTGCTGTTCAAACCA+GGG | + | chr8_1:86344357-86344376 | Msa1222140:CDS | 45.0% |
| ! | TGGTTTGTGGCAGCCATTTA+CGG | + | chr8_1:86344393-86344412 | Msa1222140:CDS | 45.0% |
| GTCAGTGCTTCATTGGTGAA+GGG | - | chr8_1:86344557-86344576 | None:intergenic | 45.0% | |
| TGTCAGTGCTTCATTGGTGA+AGG | - | chr8_1:86344558-86344577 | None:intergenic | 45.0% | |
| TGTGTGTGTCAGTGCTTCAT+TGG | - | chr8_1:86344564-86344583 | None:intergenic | 45.0% | |
| ACAAATTAGTACGCACCGTG+TGG | - | chr8_1:86344760-86344779 | None:intergenic | 45.0% | |
| TCAGACAAAGGTCTTTGTGG+TGG | + | chr8_1:86344881-86344900 | Msa1222140:CDS | 45.0% | |
| CACGTCTGTCAAGATAAGCA+GGG | + | chr8_1:86344913-86344932 | Msa1222140:CDS | 45.0% | |
| ! | GCCTTGAGCAAGTTGAATTC+TGG | + | chr8_1:86344935-86344954 | Msa1222140:CDS | 45.0% |
| CATATTGGGAGAGAAGGCTA+AGG | + | chr8_1:86345267-86345286 | Msa1222140:CDS | 45.0% | |
| ATGTGGTGGTTGCTTAATGC+TGG | + | chr8_1:86345641-86345660 | Msa1222140:intron | 45.0% | |
| TGGTTGCTTAATGCTGGCAA+GGG | + | chr8_1:86345647-86345666 | Msa1222140:intron | 45.0% | |
| TATTTCATGTCAGGGGACCT+GGG | - | chr8_1:86346146-86346165 | None:intergenic | 45.0% | |
| ATATTTCATGTCAGGGGACC+TGG | - | chr8_1:86346147-86346166 | None:intergenic | 45.0% | |
| ! | TAAAATGCTATCTGGGACCG+GGG | + | chr8_1:86346615-86346634 | Msa1222140:intron | 45.0% |
| GTTGTGTGGAGGGATAGATA+TGG | - | chr8_1:86346739-86346758 | None:intergenic | 45.0% | |
| ATAGGAAGCGGAAAGTTGTG+TGG | - | chr8_1:86346753-86346772 | None:intergenic | 45.0% | |
| !! | TACTAGGAAGCTCTGAAGCA+TGG | + | chr8_1:86347000-86347019 | Msa1222140:intron | 45.0% |
| !! | ACTAGGAAGCTCTGAAGCAT+GGG | + | chr8_1:86347001-86347020 | Msa1222140:intron | 45.0% |
| AAGCATGGGTACTCCAAACA+TGG | + | chr8_1:86347015-86347034 | Msa1222140:intron | 45.0% | |
| ! | CTCCAAACATGGAGAAGTAC+CGG | + | chr8_1:86347026-86347045 | Msa1222140:intron | 45.0% |
| !! | TCCAAACATGGAGAAGTACC+GGG | + | chr8_1:86347027-86347046 | Msa1222140:intron | 45.0% |
| GTTGGTGCAGCAAAAACGTA+AGG | + | chr8_1:86347115-86347134 | Msa1222140:intron | 45.0% | |
| ATGATGCATAGGTACGGGTA+CGG | - | chr8_1:86347348-86347367 | None:intergenic | 45.0% | |
| CGTACCTATGCATCATAGCT+AGG | + | chr8_1:86347352-86347371 | Msa1222140:intron | 45.0% | |
| GCTTCCTAGCTATGATGCAT+AGG | - | chr8_1:86347359-86347378 | None:intergenic | 45.0% | |
| !! | CGAGAGAAAGCATCAAGAGA+AGG | + | chr8_1:86347401-86347420 | Msa1222140:intron | 45.0% |
| ! | TTGAGGCATTTGAGAGACCT+GGG | - | chr8_1:86347686-86347705 | None:intergenic | 45.0% |
| TCACAACCCTGCAGTATAAG+AGG | - | chr8_1:86347931-86347950 | None:intergenic | 45.0% | |
| CTTGACAGGTCACTACTTTG+TGG | - | chr8_1:86347971-86347990 | None:intergenic | 45.0% | |
| AGTGGTGTACTTGGACTCTT+GGG | - | chr8_1:86348031-86348050 | None:intergenic | 45.0% | |
| ! | TGTAGTTGGGAGTGTAATGG+AGG | - | chr8_1:86348058-86348077 | None:intergenic | 45.0% |
| !!! | TTGTTTATATAAATTTTATA+AGG | + | chr8_1:86347809-86347828 | Msa1222140:intron | 5.0% |
| TCGCTGAGAGAGAGAAAGAG+AGG | - | chr8_1:86343868-86343887 | None:intergenic | 50.0% | |
| !! | GAGTGGTGTTGATTGGTGGT+TGG | - | chr8_1:86343972-86343991 | None:intergenic | 50.0% |
| !! | GATCGGAGAGTGGTGTTGAT+TGG | - | chr8_1:86343979-86343998 | None:intergenic | 50.0% |
| AGGGAGAGATGAGAGGAGAT+CGG | - | chr8_1:86343996-86344015 | None:intergenic | 50.0% | |
| ACGAACAAGGGAGAGATGAG+AGG | - | chr8_1:86344003-86344022 | None:intergenic | 50.0% | |
| ACCAGGGCTGAAAATTCACG+TGG | + | chr8_1:86344373-86344392 | Msa1222140:CDS | 50.0% | |
| ! | ACCACGTGAATTTTCAGCCC+TGG | - | chr8_1:86344377-86344396 | None:intergenic | 50.0% |
| CAGCCATTTACGGCTCTTCT+CGG | + | chr8_1:86344403-86344422 | Msa1222140:CDS | 50.0% | |
| TCACCGAGAAGAGCCGTAAA+TGG | - | chr8_1:86344409-86344428 | None:intergenic | 50.0% | |
| CCTGCTTATCTTGACAGACG+TGG | - | chr8_1:86344915-86344934 | None:intergenic | 50.0% | |
| CCACGTCTGTCAAGATAAGC+AGG | + | chr8_1:86344912-86344931 | Msa1222140:CDS | 50.0% | |
| GTGGTTGCTTAATGCTGGCA+AGG | + | chr8_1:86345646-86345665 | Msa1222140:intron | 50.0% | |
| ACGTGGAGTATGATGCACTG+AGG | + | chr8_1:86345998-86346017 | Msa1222140:CDS | 50.0% | |
| GTCAACTATACTATCCCCCG+AGG | + | chr8_1:86346068-86346087 | Msa1222140:CDS | 50.0% | |
| GTTGAAAGAGAGGCTGAAGC+TGG | + | chr8_1:86346298-86346317 | Msa1222140:CDS | 50.0% | |
| ACCGGGGTGAAATCCATAAC+AGG | + | chr8_1:86346631-86346650 | Msa1222140:intron | 50.0% | |
| CCCTGTTATGGATTTCACCC+CGG | - | chr8_1:86346635-86346654 | None:intergenic | 50.0% | |
| CCGGGGTGAAATCCATAACA+GGG | + | chr8_1:86346632-86346651 | Msa1222140:intron | 50.0% | |
| GAAGCGGAAAGTTGTGTGGA+GGG | - | chr8_1:86346749-86346768 | None:intergenic | 50.0% | |
| ACCCGGTACTTCTCCATGTT+TGG | - | chr8_1:86347031-86347050 | None:intergenic | 50.0% | |
| AAATGAAGGTCCGGGTACGT+TGG | - | chr8_1:86347277-86347296 | None:intergenic | 50.0% | |
| !! | ATGGGTACCGGTGCGTAATA+CGG | - | chr8_1:86347311-86347330 | None:intergenic | 50.0% |
| CTAGGAAGCGGTCAAAGCAT+AGG | + | chr8_1:86347370-86347389 | Msa1222140:intron | 50.0% | |
| GAAGCGGTCAAAGCATAGGA+AGG | + | chr8_1:86347374-86347393 | Msa1222140:intron | 50.0% | |
| CATTTGAGAGACCTGGGATC+TGG | - | chr8_1:86347680-86347699 | None:intergenic | 50.0% | |
| ! | CTTGAGGCATTTGAGAGACC+TGG | - | chr8_1:86347687-86347706 | None:intergenic | 50.0% |
| TGTACTTGGACTCTTGGGGA+AGG | - | chr8_1:86348026-86348045 | None:intergenic | 50.0% | |
| GTGGTGTACTTGGACTCTTG+GGG | - | chr8_1:86348030-86348049 | None:intergenic | 50.0% | |
| CAGTGGTGTACTTGGACTCT+TGG | - | chr8_1:86348032-86348051 | None:intergenic | 50.0% | |
| ! | AGTTGGGAGTGTAATGGAGG+AGG | - | chr8_1:86348055-86348074 | None:intergenic | 50.0% |
| AGGTTGGGCGTAGACAAGAT+GGG | - | chr8_1:86348115-86348134 | None:intergenic | 50.0% | |
| AAGGTTGGGCGTAGACAAGA+TGG | - | chr8_1:86348116-86348135 | None:intergenic | 50.0% | |
| GGTCATGTTCAATGCGGTGT+TGG | + | chr8_1:86348332-86348351 | Msa1222140:intron | 50.0% | |
| ATTCCTGCTAGAGCTGTCCA+TGG | - | chr8_1:86348394-86348413 | None:intergenic | 50.0% | |
| ! | ACAGCTCTAGCAGGAATGCT+GGG | + | chr8_1:86348397-86348416 | Msa1222140:CDS | 50.0% |
| TTTCAAGGCGAAACTCGCCT+TGG | + | chr8_1:86348802-86348821 | Msa1222140:three_prime_UTR | 50.0% | |
| TTCAAGGCGAAACTCGCCTT+GGG | + | chr8_1:86348803-86348822 | Msa1222140:three_prime_UTR | 50.0% | |
| AACTCGCCTTGGGGATTTCT+TGG | + | chr8_1:86348813-86348832 | Msa1222140:three_prime_UTR | 50.0% | |
| GGTCAACCAAGAAATCCCCA+AGG | - | chr8_1:86348822-86348841 | None:intergenic | 50.0% | |
| CTAAACGCTTCCCTTCGCGT+CGG | - | chr8_1:86343933-86343952 | None:intergenic | 55.0% | |
| GGTGGTTGGGAAGACATGAG+AGG | - | chr8_1:86343958-86343977 | None:intergenic | 55.0% | |
| !! | CGGAGAGTGGTGTTGATTGG+TGG | - | chr8_1:86343976-86343995 | None:intergenic | 55.0% |
| GATGAGAGGAGATCGGAGAG+TGG | - | chr8_1:86343989-86344008 | None:intergenic | 55.0% | |
| GCGTTCGATACCGACATGTG+TGG | - | chr8_1:86344639-86344658 | None:intergenic | 55.0% | |
| GTATCGAACGCTGACGAGTG+AGG | + | chr8_1:86344648-86344667 | Msa1222140:intron | 55.0% | |
| GAAAGAGAGGCTGAAGCTGG+AGG | + | chr8_1:86346301-86346320 | Msa1222140:CDS | 55.0% | |
| GCTGAAGCTGGAGGAAGTCT+CGG | + | chr8_1:86346310-86346329 | Msa1222140:CDS | 55.0% | |
| TGGAGGAAGTCTCGGTGAAC+TGG | + | chr8_1:86346318-86346337 | Msa1222140:CDS | 55.0% | |
| CAAATAGCCAGGTAGGGGCT+AGG | - | chr8_1:86346707-86346726 | None:intergenic | 55.0% | |
| CTAGCCCCTACCTGGCTATT+TGG | + | chr8_1:86346705-86346724 | Msa1222140:intron | 55.0% | |
| GGAAGCGGAAAGTTGTGTGG+AGG | - | chr8_1:86346750-86346769 | None:intergenic | 55.0% | |
| !! | AGAAGTACCGGGTACGCGTA+TGG | + | chr8_1:86347038-86347057 | Msa1222140:intron | 55.0% |
| ATAGGTACGGGTACGGTACC+CGG | - | chr8_1:86347341-86347360 | None:intergenic | 55.0% | |
| TAGTTTGGGAGCCAGATCCC+AGG | + | chr8_1:86347666-86347685 | Msa1222140:intron | 55.0% | |
| !! | GAAGGACGGGGTTTTTGGGA+AGG | - | chr8_1:86348008-86348027 | None:intergenic | 55.0% |
| ! | TGGGGAAGGACGGGGTTTTT+GGG | - | chr8_1:86348012-86348031 | None:intergenic | 55.0% |
| ! | TTGGGGAAGGACGGGGTTTT+TGG | - | chr8_1:86348013-86348032 | None:intergenic | 55.0% |
| TTGGACTCTTGGGGAAGGAC+GGG | - | chr8_1:86348021-86348040 | None:intergenic | 55.0% | |
| CTTGGACTCTTGGGGAAGGA+CGG | - | chr8_1:86348022-86348041 | None:intergenic | 55.0% | |
| ! | GAGTGTAATGGAGGAGGCAG+TGG | - | chr8_1:86348049-86348068 | None:intergenic | 55.0% |
| GAGAATGCCTGCAGTGAGCA+AGG | + | chr8_1:86348354-86348373 | Msa1222140:CDS | 55.0% | |
| AGGAGCAAGGATGTCTGCCA+TGG | + | chr8_1:86348374-86348393 | Msa1222140:CDS | 55.0% | |
| ! | GACAGCTCTAGCAGGAATGC+TGG | + | chr8_1:86348396-86348415 | Msa1222140:CDS | 55.0% |
| ! | CAGCTCTAGCAGGAATGCTG+GGG | + | chr8_1:86348398-86348417 | Msa1222140:CDS | 55.0% |
| !! | TCTGGAGCATCAGCACTGAC+AGG | + | chr8_1:86348653-86348672 | Msa1222140:CDS | 55.0% |
| TCAAGGCGAAACTCGCCTTG+GGG | + | chr8_1:86348804-86348823 | Msa1222140:three_prime_UTR | 55.0% | |
| CCAGGTAGGGGCTAGGTTAG+AGG | - | chr8_1:86346700-86346719 | None:intergenic | 60.0% | |
| CCTCTAACCTAGCCCCTACC+TGG | + | chr8_1:86346697-86346716 | Msa1222140:intron | 60.0% | |
| ACGAGTGCCATACGCGTACC+CGG | - | chr8_1:86347048-86347067 | None:intergenic | 60.0% | |
| ACCGGTACCCATACCCGTAC+CGG | + | chr8_1:86347319-86347338 | Msa1222140:intron | 60.0% | |
| ACGGTACCCGGTACGGGTAT+GGG | - | chr8_1:86347329-86347348 | None:intergenic | 60.0% | |
| TACGGTACCCGGTACGGGTA+TGG | - | chr8_1:86347330-86347349 | None:intergenic | 60.0% | |
| TACGGGTACGGTACCCGGTA+CGG | - | chr8_1:86347336-86347355 | None:intergenic | 60.0% | |
| TGGACTCTTGGGGAAGGACG+GGG | - | chr8_1:86348020-86348039 | None:intergenic | 60.0% | |
| GGAGGAGGCAGTGGTGTACT+TGG | - | chr8_1:86348040-86348059 | None:intergenic | 60.0% | |
| CCTTGCTCCTTGCTCACTGC+AGG | - | chr8_1:86348364-86348383 | None:intergenic | 60.0% | |
| CCTGCAGTGAGCAAGGAGCA+AGG | + | chr8_1:86348361-86348380 | Msa1222140:CDS | 60.0% | |
| ! | CTGCCATGGACAGCTCTAGC+AGG | + | chr8_1:86348388-86348407 | Msa1222140:CDS | 60.0% |
| CTGCTGCACTCCGACGCGAA+GGG | + | chr8_1:86343920-86343939 | Msa1222140:CDS | 65.0% | |
| CCCGGTACGGGTATGGGTAC+CGG | - | chr8_1:86347323-86347342 | None:intergenic | 65.0% | |
| CCGGTACCCATACCCGTACC+GGG | + | chr8_1:86347320-86347339 | Msa1222140:intron | 65.0% | |
| ACGGGTACGGTACCCGGTAC+GGG | - | chr8_1:86347335-86347354 | None:intergenic | 65.0% | |
| GCTGCTGCACTCCGACGCGA+AGG | + | chr8_1:86343919-86343938 | Msa1222140:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 86343743 | 86349006 | 86343743 | ID=Msa1222140;Name=Msa1222140 |
| chr8_1 | mRNA | 86343743 | 86349006 | 86343743 | ID=Msa1222140-mRNA-1;Parent=Msa1222140;Name=Msa1222140-mRNA-1;_AED=0.11;_eAED=0.11;_QI=167|0.87|0.88|1|1|1|9|327|356 |
| chr8_1 | exon | 86343743 | 86344016 | 86343743 | ID=Msa1222140-mRNA-1:exon:30993;Parent=Msa1222140-mRNA-1 |
| chr8_1 | exon | 86344101 | 86344147 | 86344101 | ID=Msa1222140-mRNA-1:exon:30994;Parent=Msa1222140-mRNA-1 |
| chr8_1 | exon | 86344284 | 86344436 | 86344284 | ID=Msa1222140-mRNA-1:exon:30995;Parent=Msa1222140-mRNA-1 |
| chr8_1 | exon | 86344843 | 86344956 | 86344843 | ID=Msa1222140-mRNA-1:exon:30996;Parent=Msa1222140-mRNA-1 |
| chr8_1 | exon | 86345155 | 86345369 | 86345155 | ID=Msa1222140-mRNA-1:exon:30997;Parent=Msa1222140-mRNA-1 |
| chr8_1 | exon | 86345967 | 86346089 | 86345967 | ID=Msa1222140-mRNA-1:exon:30998;Parent=Msa1222140-mRNA-1 |
| chr8_1 | exon | 86346295 | 86346414 | 86346295 | ID=Msa1222140-mRNA-1:exon:30999;Parent=Msa1222140-mRNA-1 |
| chr8_1 | exon | 86348333 | 86348454 | 86348333 | ID=Msa1222140-mRNA-1:exon:31000;Parent=Msa1222140-mRNA-1 |
| chr8_1 | exon | 86348610 | 86349006 | 86348610 | ID=Msa1222140-mRNA-1:exon:31001;Parent=Msa1222140-mRNA-1 |
| chr8_1 | five_prime_UTR | 86343743 | 86343909 | 86343743 | ID=Msa1222140-mRNA-1:five_prime_utr;Parent=Msa1222140-mRNA-1 |
| chr8_1 | CDS | 86343910 | 86344016 | 86343910 | ID=Msa1222140-mRNA-1:cds;Parent=Msa1222140-mRNA-1 |
| chr8_1 | CDS | 86344101 | 86344147 | 86344101 | ID=Msa1222140-mRNA-1:cds;Parent=Msa1222140-mRNA-1 |
| chr8_1 | CDS | 86344284 | 86344436 | 86344284 | ID=Msa1222140-mRNA-1:cds;Parent=Msa1222140-mRNA-1 |
| chr8_1 | CDS | 86344843 | 86344956 | 86344843 | ID=Msa1222140-mRNA-1:cds;Parent=Msa1222140-mRNA-1 |
| chr8_1 | CDS | 86345155 | 86345369 | 86345155 | ID=Msa1222140-mRNA-1:cds;Parent=Msa1222140-mRNA-1 |
| chr8_1 | CDS | 86345967 | 86346089 | 86345967 | ID=Msa1222140-mRNA-1:cds;Parent=Msa1222140-mRNA-1 |
| chr8_1 | CDS | 86346295 | 86346414 | 86346295 | ID=Msa1222140-mRNA-1:cds;Parent=Msa1222140-mRNA-1 |
| chr8_1 | CDS | 86348333 | 86348454 | 86348333 | ID=Msa1222140-mRNA-1:cds;Parent=Msa1222140-mRNA-1 |
| chr8_1 | CDS | 86348610 | 86348679 | 86348610 | ID=Msa1222140-mRNA-1:cds;Parent=Msa1222140-mRNA-1 |
| chr8_1 | three_prime_UTR | 86348680 | 86349006 | 86348680 | ID=Msa1222140-mRNA-1:three_prime_utr;Parent=Msa1222140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
