Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227980 | XP_003626704.2 | 90.110 | 364 | 29 | 3 | 1 | 363 | 1 | 358 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227980 | sp|Q9M0B8|WTR37_ARATH | 50.829 | 362 | 165 | 5 | 14 | 363 | 1 | 361 | 2.76e-124 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0209140 | Msa1227980 | 0.807303 | 5.399020e-50 | -8.615850e-47 |
| Msa1227980 | Msa1271070 | 0.876856 | 1.001010e-68 | -8.615850e-47 |
| Msa1227980 | Msa1308170 | 0.842748 | 2.139771e-58 | -8.615850e-47 |
| Msa1227980 | Msa1373170 | 0.828914 | 6.895647e-55 | -8.615850e-47 |
| Msa1227980 | Msa1418240 | 0.812690 | 3.733453e-51 | -8.615850e-47 |
| Msa1184300 | Msa1227980 | 0.963360 | 5.453432e-122 | -8.615850e-47 |
| Msa0485240 | Msa1227980 | 0.802155 | 6.414384e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227980 | MtrunA17_Chr8g0334751 | 90.110 | 364 | 29 | 3 | 1 | 363 | 1 | 358 | 0.0 | 607 |
| Msa1227980 | MtrunA17_Chr8g0334761 | 76.374 | 364 | 83 | 1 | 3 | 363 | 2 | 365 | 0.0 | 569 |
| Msa1227980 | MtrunA17_Chr2g0310441 | 74.324 | 370 | 82 | 3 | 3 | 360 | 2 | 370 | 0.0 | 530 |
| Msa1227980 | MtrunA17_Chr8g0334771 | 72.386 | 373 | 87 | 4 | 3 | 360 | 2 | 373 | 4.57e-178 | 499 |
| Msa1227980 | MtrunA17_Chr4g0073241 | 48.626 | 364 | 179 | 4 | 1 | 362 | 1 | 358 | 1.66e-121 | 355 |
| Msa1227980 | MtrunA17_Chr8g0334711 | 72.464 | 207 | 54 | 3 | 4 | 209 | 3 | 207 | 1.30e-93 | 278 |
| Msa1227980 | MtrunA17_Chr8g0334721 | 82.609 | 138 | 24 | 0 | 222 | 359 | 1 | 138 | 9.60e-80 | 241 |
| Msa1227980 | MtrunA17_Chr8g0354121 | 36.639 | 363 | 209 | 6 | 6 | 351 | 11 | 369 | 8.76e-76 | 239 |
| Msa1227980 | MtrunA17_Chr8g0334731 | 62.019 | 208 | 57 | 4 | 1 | 206 | 1 | 188 | 1.95e-75 | 231 |
| Msa1227980 | MtrunA17_Chr6g0483401 | 38.348 | 339 | 199 | 4 | 20 | 352 | 19 | 353 | 4.06e-71 | 226 |
| Msa1227980 | MtrunA17_Chr1g0155761 | 35.501 | 369 | 214 | 3 | 14 | 359 | 24 | 391 | 4.22e-71 | 227 |
| Msa1227980 | MtrunA17_Chr3g0081421 | 37.135 | 342 | 207 | 5 | 7 | 343 | 13 | 351 | 6.33e-71 | 226 |
| Msa1227980 | MtrunA17_Chr3g0142131 | 36.216 | 370 | 209 | 5 | 16 | 362 | 25 | 390 | 1.41e-70 | 226 |
| Msa1227980 | MtrunA17_Chr7g0255561 | 38.390 | 323 | 194 | 3 | 12 | 330 | 15 | 336 | 2.21e-69 | 223 |
| Msa1227980 | MtrunA17_Chr7g0255581 | 38.390 | 323 | 194 | 3 | 12 | 330 | 15 | 336 | 2.21e-69 | 223 |
| Msa1227980 | MtrunA17_Chr6g0463971 | 36.527 | 334 | 207 | 2 | 7 | 337 | 12 | 343 | 5.57e-69 | 220 |
| Msa1227980 | MtrunA17_Chr3g0081511 | 37.309 | 327 | 200 | 4 | 12 | 335 | 18 | 342 | 9.65e-69 | 221 |
| Msa1227980 | MtrunA17_Chr2g0278541 | 32.597 | 362 | 231 | 5 | 12 | 363 | 13 | 371 | 9.52e-66 | 213 |
| Msa1227980 | MtrunA17_Chr2g0284261 | 32.948 | 346 | 229 | 2 | 8 | 353 | 5 | 347 | 1.43e-64 | 209 |
| Msa1227980 | MtrunA17_Chr1g0164831 | 34.393 | 346 | 213 | 6 | 12 | 355 | 4 | 337 | 8.95e-63 | 204 |
| Msa1227980 | MtrunA17_Chr7g0271561 | 33.133 | 332 | 214 | 3 | 11 | 335 | 7 | 337 | 1.37e-62 | 204 |
| Msa1227980 | MtrunA17_Chr2g0278561 | 33.141 | 347 | 221 | 4 | 12 | 352 | 16 | 357 | 1.48e-62 | 205 |
| Msa1227980 | MtrunA17_Chr1g0160171 | 35.088 | 342 | 216 | 3 | 12 | 353 | 17 | 352 | 1.57e-62 | 204 |
| Msa1227980 | MtrunA17_Chr1g0186611 | 35.143 | 350 | 211 | 7 | 10 | 354 | 15 | 353 | 1.66e-61 | 201 |
| Msa1227980 | MtrunA17_Chr1g0182291 | 34.706 | 340 | 218 | 4 | 12 | 350 | 16 | 352 | 1.90e-61 | 201 |
| Msa1227980 | MtrunA17_Chr3g0114691 | 33.434 | 332 | 212 | 3 | 12 | 338 | 21 | 348 | 5.32e-61 | 201 |
| Msa1227980 | MtrunA17_Chr1g0186601 | 34.627 | 335 | 214 | 4 | 5 | 337 | 10 | 341 | 2.42e-60 | 198 |
| Msa1227980 | MtrunA17_Chr2g0278551 | 32.861 | 353 | 230 | 3 | 12 | 362 | 13 | 360 | 6.81e-60 | 198 |
| Msa1227980 | MtrunA17_Chr1g0160181 | 38.806 | 335 | 184 | 7 | 6 | 330 | 16 | 339 | 2.86e-59 | 196 |
| Msa1227980 | MtrunA17_Chr7g0263101 | 33.516 | 364 | 233 | 6 | 6 | 362 | 8 | 369 | 6.56e-59 | 195 |
| Msa1227980 | MtrunA17_Chr1g0186561 | 36.556 | 331 | 206 | 4 | 10 | 338 | 15 | 343 | 1.38e-58 | 193 |
| Msa1227980 | MtrunA17_Chr4g0059311 | 34.568 | 324 | 204 | 3 | 11 | 330 | 11 | 330 | 1.45e-58 | 193 |
| Msa1227980 | MtrunA17_Chr3g0129571 | 32.857 | 350 | 229 | 3 | 12 | 356 | 8 | 356 | 1.73e-58 | 193 |
| Msa1227980 | MtrunA17_Chr1g0186641 | 35.015 | 337 | 208 | 6 | 10 | 341 | 12 | 342 | 6.94e-58 | 191 |
| Msa1227980 | MtrunA17_Chr2g0290611 | 32.507 | 363 | 226 | 6 | 7 | 363 | 8 | 357 | 8.89e-58 | 191 |
| Msa1227980 | MtrunA17_Chr1g0186571 | 36.103 | 349 | 208 | 9 | 12 | 352 | 14 | 355 | 5.81e-57 | 189 |
| Msa1227980 | MtrunA17_Chr1g0171301 | 32.853 | 347 | 225 | 6 | 10 | 352 | 15 | 357 | 1.26e-56 | 188 |
| Msa1227980 | MtrunA17_Chr8g0383731 | 34.493 | 345 | 218 | 4 | 12 | 349 | 6 | 349 | 5.75e-56 | 186 |
| Msa1227980 | MtrunA17_Chr2g0332001 | 33.140 | 344 | 225 | 4 | 15 | 356 | 42 | 382 | 8.60e-56 | 187 |
| Msa1227980 | MtrunA17_Chr3g0129601 | 32.951 | 349 | 213 | 5 | 12 | 356 | 30 | 361 | 1.19e-54 | 183 |
| Msa1227980 | MtrunA17_Chr3g0114731 | 31.124 | 347 | 235 | 3 | 12 | 357 | 19 | 362 | 3.38e-53 | 181 |
| Msa1227980 | MtrunA17_Chr3g0114701 | 35.398 | 339 | 213 | 5 | 12 | 346 | 10 | 346 | 6.31e-53 | 179 |
| Msa1227980 | MtrunA17_Chr3g0126101 | 31.686 | 344 | 227 | 4 | 11 | 350 | 6 | 345 | 7.41e-53 | 178 |
| Msa1227980 | MtrunA17_Chr3g0129591 | 33.333 | 324 | 211 | 2 | 12 | 330 | 6 | 329 | 7.94e-52 | 176 |
| Msa1227980 | MtrunA17_Chr1g0184221 | 30.108 | 372 | 231 | 7 | 8 | 361 | 13 | 373 | 1.39e-51 | 176 |
| Msa1227980 | MtrunA17_Chr4g0050881 | 31.214 | 346 | 226 | 4 | 12 | 351 | 10 | 349 | 5.02e-51 | 174 |
| Msa1227980 | MtrunA17_Chr1g0160111 | 28.775 | 351 | 235 | 4 | 20 | 356 | 16 | 365 | 1.21e-48 | 168 |
| Msa1227980 | MtrunA17_Chr4g0050941 | 30.595 | 353 | 237 | 3 | 12 | 357 | 13 | 364 | 2.51e-48 | 167 |
| Msa1227980 | MtrunA17_Chr4g0051021 | 30.114 | 352 | 243 | 2 | 7 | 356 | 10 | 360 | 4.29e-48 | 167 |
| Msa1227980 | MtrunA17_Chr4g0050891 | 30.938 | 320 | 213 | 3 | 12 | 325 | 14 | 331 | 1.76e-47 | 164 |
| Msa1227980 | MtrunA17_Chr5g0413961 | 32.733 | 333 | 216 | 4 | 1 | 330 | 1 | 328 | 8.85e-47 | 162 |
| Msa1227980 | MtrunA17_Chr3g0114711 | 28.052 | 385 | 232 | 6 | 12 | 356 | 15 | 394 | 3.99e-46 | 162 |
| Msa1227980 | MtrunA17_Chr3g0129581 | 33.538 | 325 | 209 | 3 | 12 | 330 | 6 | 329 | 5.39e-46 | 160 |
| Msa1227980 | MtrunA17_Chr7g0227921 | 33.134 | 335 | 210 | 5 | 31 | 355 | 31 | 361 | 1.84e-45 | 159 |
| Msa1227980 | MtrunA17_Chr8g0334741 | 55.414 | 157 | 26 | 4 | 222 | 362 | 1 | 129 | 3.86e-45 | 151 |
| Msa1227980 | MtrunA17_Chr5g0408031 | 31.832 | 333 | 206 | 5 | 16 | 330 | 15 | 344 | 4.53e-44 | 156 |
| Msa1227980 | MtrunA17_Chr5g0407991 | 29.609 | 358 | 230 | 6 | 16 | 353 | 14 | 369 | 4.20e-42 | 151 |
| Msa1227980 | MtrunA17_Chr5g0441761 | 29.167 | 336 | 226 | 5 | 16 | 346 | 19 | 347 | 7.82e-42 | 149 |
| Msa1227980 | MtrunA17_Chr5g0408041 | 29.067 | 375 | 239 | 6 | 1 | 353 | 4 | 373 | 2.99e-41 | 149 |
| Msa1227980 | MtrunA17_Chr5g0428881 | 27.596 | 366 | 244 | 3 | 13 | 358 | 20 | 384 | 5.66e-41 | 148 |
| Msa1227980 | MtrunA17_Chr5g0413921 | 28.615 | 325 | 231 | 1 | 16 | 340 | 12 | 335 | 3.20e-40 | 145 |
| Msa1227980 | MtrunA17_Chr5g0413951 | 29.022 | 317 | 205 | 4 | 23 | 330 | 20 | 325 | 1.25e-39 | 143 |
| Msa1227980 | MtrunA17_Chr5g0408001 | 29.477 | 363 | 229 | 7 | 16 | 363 | 15 | 365 | 6.92e-39 | 142 |
| Msa1227980 | MtrunA17_Chr5g0407971 | 30.030 | 333 | 214 | 5 | 14 | 330 | 14 | 343 | 9.68e-39 | 142 |
| Msa1227980 | MtrunA17_Chr5g0413941 | 26.708 | 322 | 235 | 1 | 16 | 337 | 12 | 332 | 4.79e-38 | 139 |
| Msa1227980 | MtrunA17_Chr6g0451201 | 33.660 | 306 | 191 | 4 | 31 | 333 | 32 | 328 | 9.07e-38 | 139 |
| Msa1227980 | MtrunA17_Chr5g0413931 | 26.006 | 323 | 238 | 1 | 15 | 337 | 10 | 331 | 1.08e-36 | 135 |
| Msa1227980 | MtrunA17_Chr1g0177221 | 36.015 | 261 | 146 | 6 | 8 | 258 | 15 | 264 | 1.56e-36 | 133 |
| Msa1227980 | MtrunA17_Chr5g0404811 | 29.461 | 241 | 166 | 2 | 127 | 363 | 8 | 248 | 2.39e-36 | 132 |
| Msa1227980 | MtrunA17_Chr3g0126091 | 26.536 | 358 | 245 | 5 | 11 | 362 | 11 | 356 | 2.51e-36 | 135 |
| Msa1227980 | MtrunA17_Chr4g0051001 | 30.844 | 308 | 205 | 4 | 6 | 308 | 26 | 330 | 4.13e-36 | 134 |
| Msa1227980 | MtrunA17_Chr6g0451261 | 32.517 | 286 | 182 | 4 | 31 | 311 | 31 | 310 | 1.35e-35 | 137 |
| Msa1227980 | MtrunA17_Chr1g0150151 | 28.529 | 333 | 234 | 3 | 1 | 330 | 1 | 332 | 1.36e-35 | 133 |
| Msa1227980 | MtrunA17_Chr3g0084091 | 29.137 | 278 | 191 | 2 | 87 | 363 | 5 | 277 | 3.17e-35 | 130 |
| Msa1227980 | MtrunA17_Chr5g0429001 | 26.623 | 308 | 215 | 3 | 61 | 363 | 1 | 302 | 1.31e-34 | 129 |
| Msa1227980 | MtrunA17_Chr4g0050931 | 28.116 | 345 | 194 | 5 | 12 | 347 | 13 | 312 | 1.82e-34 | 129 |
| Msa1227980 | MtrunA17_Chr6g0451171 | 30.061 | 326 | 220 | 3 | 10 | 333 | 11 | 330 | 4.89e-34 | 129 |
| Msa1227980 | MtrunA17_Chr6g0451211 | 31.325 | 332 | 217 | 6 | 11 | 338 | 12 | 336 | 1.59e-33 | 127 |
| Msa1227980 | MtrunA17_Chr8g0369841 | 27.078 | 373 | 251 | 7 | 4 | 361 | 2 | 368 | 2.56e-33 | 127 |
| Msa1227980 | MtrunA17_Chr5g0399281 | 27.714 | 350 | 227 | 7 | 19 | 359 | 16 | 348 | 5.25e-33 | 125 |
| Msa1227980 | MtrunA17_Chr2g0278021 | 33.475 | 236 | 145 | 4 | 126 | 352 | 1 | 233 | 2.35e-31 | 120 |
| Msa1227980 | MtrunA17_Chr6g0451251 | 31.361 | 338 | 211 | 6 | 31 | 363 | 32 | 353 | 3.69e-30 | 118 |
| Msa1227980 | MtrunA17_Chr4g0056081 | 27.300 | 337 | 220 | 11 | 19 | 337 | 22 | 351 | 7.04e-30 | 117 |
| Msa1227980 | MtrunA17_Chr1g0211801 | 29.032 | 248 | 172 | 2 | 12 | 258 | 12 | 256 | 1.73e-29 | 114 |
| Msa1227980 | MtrunA17_Chr6g0451191 | 29.808 | 208 | 143 | 1 | 126 | 333 | 1 | 205 | 4.91e-25 | 101 |
| Msa1227980 | MtrunA17_Chr1g0211811 | 39.130 | 92 | 53 | 1 | 260 | 351 | 1 | 89 | 2.95e-18 | 79.0 |
| Msa1227980 | MtrunA17_Chr1g0177231 | 41.333 | 75 | 44 | 0 | 256 | 330 | 26 | 100 | 5.60e-15 | 70.9 |
| Msa1227980 | MtrunA17_Chr2g0278031 | 34.188 | 117 | 70 | 2 | 12 | 125 | 15 | 127 | 1.22e-14 | 70.1 |
| Msa1227980 | MtrunA17_Chr1g0172891 | 43.284 | 67 | 38 | 0 | 264 | 330 | 12 | 78 | 2.02e-13 | 66.2 |
| Msa1227980 | MtrunA17_Chr4g0050921 | 31.683 | 101 | 69 | 0 | 211 | 311 | 4 | 104 | 2.17e-13 | 66.6 |
| Msa1227980 | MtrunA17_Chr5g0404801 | 37.168 | 113 | 66 | 2 | 14 | 124 | 10 | 119 | 4.09e-13 | 65.9 |
| Msa1227980 | MtrunA17_Chr4g0050911 | 30.233 | 129 | 81 | 1 | 88 | 207 | 7 | 135 | 1.23e-12 | 65.5 |
| Msa1227980 | MtrunA17_Chr1g0182261 | 32.800 | 125 | 77 | 3 | 211 | 330 | 88 | 210 | 5.95e-12 | 64.7 |
| Msa1227980 | MtrunA17_Chr1g0172881 | 31.690 | 142 | 72 | 4 | 126 | 258 | 24 | 149 | 1.58e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227980 | AT4G30420.2 | 50.541 | 370 | 170 | 5 | 6 | 363 | 3 | 371 | 8.85e-128 | 372 |
| Msa1227980 | AT4G30420.1 | 50.829 | 362 | 165 | 5 | 14 | 363 | 1 | 361 | 2.80e-125 | 365 |
| Msa1227980 | AT4G28040.1 | 42.899 | 345 | 178 | 6 | 5 | 346 | 1 | 329 | 2.62e-91 | 278 |
| Msa1227980 | AT4G28040.5 | 42.899 | 345 | 178 | 6 | 5 | 346 | 1 | 329 | 2.62e-91 | 278 |
| Msa1227980 | AT4G28040.3 | 42.899 | 345 | 178 | 6 | 5 | 346 | 1 | 329 | 2.62e-91 | 278 |
| Msa1227980 | AT4G28040.4 | 42.899 | 345 | 178 | 6 | 5 | 346 | 1 | 329 | 2.62e-91 | 278 |
| Msa1227980 | AT4G28040.2 | 42.899 | 345 | 178 | 6 | 5 | 346 | 1 | 329 | 2.62e-91 | 278 |
| Msa1227980 | AT1G75500.1 | 37.931 | 348 | 203 | 5 | 14 | 353 | 22 | 364 | 7.60e-71 | 226 |
| Msa1227980 | AT1G75500.2 | 37.931 | 348 | 203 | 5 | 14 | 353 | 22 | 364 | 7.60e-71 | 226 |
| Msa1227980 | AT4G08300.1 | 37.391 | 345 | 204 | 5 | 1 | 338 | 1 | 340 | 2.25e-69 | 222 |
| Msa1227980 | AT1G21890.1 | 36.022 | 372 | 216 | 5 | 1 | 362 | 1 | 360 | 1.31e-66 | 216 |
| Msa1227980 | AT1G44800.1 | 36.735 | 343 | 214 | 3 | 1 | 342 | 1 | 341 | 7.42e-66 | 213 |
| Msa1227980 | AT3G18200.2 | 34.036 | 332 | 212 | 3 | 1 | 330 | 24 | 350 | 3.21e-65 | 212 |
| Msa1227980 | AT3G53210.1 | 35.393 | 356 | 215 | 4 | 14 | 360 | 12 | 361 | 5.35e-64 | 208 |
| Msa1227980 | AT5G07050.1 | 35.613 | 351 | 210 | 6 | 12 | 349 | 18 | 365 | 1.23e-62 | 206 |
| Msa1227980 | AT1G09380.1 | 35.514 | 321 | 202 | 3 | 11 | 327 | 7 | 326 | 5.08e-61 | 201 |
| Msa1227980 | AT2G40900.1 | 34.925 | 335 | 209 | 4 | 4 | 337 | 2 | 328 | 1.69e-60 | 200 |
| Msa1227980 | AT5G64700.1 | 34.454 | 357 | 224 | 3 | 5 | 352 | 1 | 356 | 3.32e-60 | 198 |
| Msa1227980 | AT3G56620.1 | 34.769 | 325 | 206 | 3 | 4 | 327 | 2 | 321 | 9.99e-59 | 195 |
| Msa1227980 | AT2G39510.1 | 34.650 | 329 | 209 | 6 | 5 | 330 | 1 | 326 | 1.56e-58 | 194 |
| Msa1227980 | AT2G37460.1 | 34.731 | 334 | 196 | 9 | 7 | 330 | 10 | 331 | 3.22e-57 | 191 |
| Msa1227980 | AT1G43650.1 | 33.433 | 335 | 217 | 4 | 14 | 346 | 9 | 339 | 4.43e-56 | 187 |
| Msa1227980 | AT3G53210.2 | 36.396 | 283 | 166 | 3 | 87 | 360 | 27 | 304 | 2.17e-55 | 184 |
| Msa1227980 | AT1G21890.2 | 36.909 | 317 | 189 | 3 | 1 | 308 | 1 | 315 | 2.14e-54 | 182 |
| Msa1227980 | AT5G13670.1 | 30.854 | 363 | 239 | 7 | 5 | 362 | 1 | 356 | 3.38e-54 | 183 |
| Msa1227980 | AT1G11450.3 | 32.945 | 343 | 220 | 5 | 12 | 350 | 16 | 352 | 8.17e-53 | 179 |
| Msa1227980 | AT3G30340.1 | 30.841 | 321 | 211 | 3 | 36 | 355 | 35 | 345 | 1.53e-51 | 176 |
| Msa1227980 | AT4G01440.1 | 31.024 | 332 | 226 | 3 | 10 | 340 | 8 | 337 | 2.27e-51 | 175 |
| Msa1227980 | AT4G08290.1 | 32.551 | 341 | 215 | 6 | 7 | 337 | 8 | 343 | 4.19e-51 | 175 |
| Msa1227980 | AT1G11450.5 | 33.981 | 309 | 194 | 5 | 46 | 350 | 6 | 308 | 1.60e-50 | 171 |
| Msa1227980 | AT1G11460.1 | 33.127 | 323 | 210 | 3 | 12 | 331 | 16 | 335 | 7.43e-50 | 170 |
| Msa1227980 | AT3G28050.1 | 33.989 | 356 | 209 | 10 | 11 | 357 | 11 | 349 | 3.18e-49 | 169 |
| Msa1227980 | AT1G11450.2 | 33.660 | 306 | 193 | 5 | 49 | 350 | 2 | 301 | 6.78e-49 | 167 |
| Msa1227980 | AT4G01430.1 | 28.809 | 361 | 246 | 6 | 8 | 363 | 5 | 359 | 6.83e-49 | 169 |
| Msa1227980 | AT5G40230.1 | 32.676 | 355 | 221 | 5 | 11 | 362 | 20 | 359 | 3.43e-48 | 167 |
| Msa1227980 | AT1G01070.1 | 31.437 | 334 | 222 | 4 | 1 | 330 | 5 | 335 | 3.77e-48 | 167 |
| Msa1227980 | AT3G18200.1 | 33.929 | 224 | 142 | 2 | 109 | 330 | 1 | 220 | 6.34e-46 | 157 |
| Msa1227980 | AT1G70260.1 | 28.532 | 361 | 242 | 5 | 11 | 359 | 11 | 367 | 1.71e-45 | 160 |
| Msa1227980 | AT5G47470.1 | 31.322 | 348 | 217 | 6 | 16 | 359 | 34 | 363 | 3.59e-45 | 159 |
| Msa1227980 | AT5G40240.1 | 31.889 | 323 | 216 | 3 | 11 | 330 | 19 | 340 | 5.44e-45 | 158 |
| Msa1227980 | AT5G40240.3 | 31.889 | 323 | 216 | 3 | 11 | 330 | 19 | 340 | 5.44e-45 | 158 |
| Msa1227980 | AT5G47470.2 | 31.322 | 348 | 217 | 6 | 16 | 359 | 62 | 391 | 6.10e-45 | 159 |
| Msa1227980 | AT5G40240.2 | 31.889 | 323 | 216 | 3 | 11 | 330 | 33 | 354 | 7.97e-45 | 158 |
| Msa1227980 | AT5G47470.3 | 32.288 | 319 | 204 | 5 | 16 | 330 | 62 | 372 | 1.53e-44 | 157 |
| Msa1227980 | AT1G11450.1 | 34.091 | 264 | 165 | 4 | 91 | 350 | 2 | 260 | 3.82e-44 | 153 |
| Msa1227980 | AT4G01440.3 | 29.373 | 303 | 211 | 3 | 10 | 311 | 8 | 308 | 7.95e-44 | 154 |
| Msa1227980 | AT2G37450.2 | 32.416 | 327 | 192 | 6 | 7 | 330 | 4 | 304 | 1.70e-42 | 151 |
| Msa1227980 | AT1G68170.1 | 30.595 | 353 | 233 | 5 | 13 | 360 | 4 | 349 | 1.78e-42 | 151 |
| Msa1227980 | AT1G68170.2 | 30.595 | 353 | 233 | 5 | 13 | 360 | 14 | 359 | 2.45e-42 | 151 |
| Msa1227980 | AT4G15540.1 | 32.754 | 345 | 212 | 5 | 11 | 348 | 16 | 347 | 5.00e-42 | 150 |
| Msa1227980 | AT4G15540.2 | 32.754 | 345 | 212 | 5 | 11 | 348 | 16 | 347 | 5.00e-42 | 150 |
| Msa1227980 | AT5G45370.1 | 30.495 | 364 | 232 | 8 | 2 | 363 | 10 | 354 | 5.45e-42 | 150 |
| Msa1227980 | AT3G53210.3 | 36.653 | 251 | 143 | 4 | 14 | 258 | 12 | 252 | 1.22e-41 | 147 |
| Msa1227980 | AT5G45370.2 | 30.000 | 380 | 237 | 9 | 2 | 363 | 10 | 378 | 4.51e-41 | 148 |
| Msa1227980 | AT5G45370.4 | 30.000 | 380 | 237 | 9 | 2 | 363 | 10 | 378 | 4.51e-41 | 148 |
| Msa1227980 | AT1G01070.2 | 32.422 | 256 | 167 | 3 | 80 | 331 | 36 | 289 | 4.50e-40 | 144 |
| Msa1227980 | AT4G16620.1 | 31.844 | 358 | 207 | 11 | 20 | 359 | 20 | 358 | 7.82e-40 | 144 |
| Msa1227980 | AT1G11450.4 | 31.208 | 298 | 202 | 3 | 12 | 308 | 16 | 311 | 8.19e-40 | 144 |
| Msa1227980 | AT4G01430.2 | 28.889 | 315 | 217 | 5 | 8 | 317 | 5 | 317 | 6.68e-39 | 141 |
| Msa1227980 | AT4G01440.5 | 32.174 | 230 | 154 | 2 | 112 | 340 | 1 | 229 | 4.38e-38 | 137 |
| Msa1227980 | AT4G01440.2 | 32.174 | 230 | 154 | 2 | 112 | 340 | 1 | 229 | 4.38e-38 | 137 |
| Msa1227980 | AT3G45870.1 | 30.650 | 323 | 211 | 3 | 14 | 325 | 14 | 334 | 4.90e-38 | 140 |
| Msa1227980 | AT1G60050.1 | 26.796 | 362 | 249 | 4 | 8 | 360 | 9 | 363 | 1.51e-37 | 139 |
| Msa1227980 | AT5G40210.1 | 30.769 | 325 | 197 | 8 | 16 | 334 | 17 | 319 | 1.66e-36 | 135 |
| Msa1227980 | AT1G25270.1 | 27.586 | 348 | 243 | 3 | 13 | 358 | 4 | 344 | 6.14e-36 | 134 |
| Msa1227980 | AT4G19185.1 | 30.303 | 330 | 213 | 5 | 16 | 330 | 25 | 352 | 6.98e-36 | 135 |
| Msa1227980 | AT5G64700.2 | 32.308 | 260 | 168 | 2 | 5 | 257 | 1 | 259 | 2.71e-35 | 130 |
| Msa1227980 | AT4G01450.2 | 30.149 | 335 | 229 | 2 | 10 | 344 | 8 | 337 | 1.04e-34 | 131 |
| Msa1227980 | AT3G45870.8 | 29.545 | 308 | 204 | 3 | 14 | 310 | 14 | 319 | 3.49e-32 | 123 |
| Msa1227980 | AT2G37450.3 | 33.476 | 233 | 148 | 5 | 101 | 330 | 4 | 232 | 2.56e-31 | 119 |
| Msa1227980 | AT3G28130.5 | 28.261 | 276 | 170 | 7 | 95 | 362 | 9 | 264 | 5.90e-31 | 119 |
| Msa1227980 | AT3G28130.1 | 28.261 | 276 | 170 | 7 | 95 | 362 | 9 | 264 | 5.90e-31 | 119 |
| Msa1227980 | AT1G43650.2 | 31.967 | 244 | 162 | 3 | 14 | 257 | 9 | 248 | 1.74e-30 | 117 |
| Msa1227980 | AT4G19185.2 | 30.385 | 260 | 165 | 4 | 86 | 330 | 16 | 274 | 1.80e-30 | 119 |
| Msa1227980 | AT3G28130.2 | 28.261 | 276 | 170 | 7 | 95 | 362 | 95 | 350 | 2.04e-30 | 119 |
| Msa1227980 | AT3G28080.5 | 29.707 | 239 | 160 | 5 | 97 | 330 | 9 | 244 | 2.28e-30 | 117 |
| Msa1227980 | AT3G28080.7 | 29.707 | 239 | 160 | 5 | 97 | 330 | 9 | 244 | 2.28e-30 | 117 |
| Msa1227980 | AT3G28080.8 | 29.707 | 239 | 160 | 5 | 97 | 330 | 9 | 244 | 2.28e-30 | 117 |
| Msa1227980 | AT3G28080.6 | 29.707 | 239 | 160 | 5 | 97 | 330 | 9 | 244 | 2.28e-30 | 117 |
| Msa1227980 | AT4G01450.1 | 28.763 | 299 | 208 | 2 | 10 | 308 | 8 | 301 | 3.34e-30 | 118 |
| Msa1227980 | AT3G28100.1 | 29.167 | 240 | 166 | 3 | 97 | 333 | 98 | 336 | 6.93e-30 | 117 |
| Msa1227980 | AT3G28070.2 | 30.864 | 243 | 158 | 6 | 97 | 333 | 9 | 247 | 7.30e-30 | 115 |
| Msa1227980 | AT3G28080.2 | 29.707 | 239 | 160 | 5 | 97 | 330 | 90 | 325 | 1.16e-29 | 117 |
| Msa1227980 | AT4G01430.3 | 28.634 | 227 | 153 | 4 | 141 | 363 | 1 | 222 | 1.46e-29 | 114 |
| Msa1227980 | AT3G28080.1 | 29.707 | 239 | 160 | 5 | 97 | 330 | 98 | 333 | 1.73e-29 | 117 |
| Msa1227980 | AT4G08290.2 | 31.496 | 254 | 169 | 4 | 7 | 257 | 8 | 259 | 2.51e-29 | 114 |
| Msa1227980 | AT4G16620.4 | 31.522 | 276 | 154 | 9 | 101 | 359 | 4 | 261 | 2.70e-29 | 114 |
| Msa1227980 | AT4G16620.2 | 31.522 | 276 | 154 | 9 | 101 | 359 | 4 | 261 | 2.70e-29 | 114 |
| Msa1227980 | AT3G28070.1 | 30.453 | 243 | 159 | 6 | 97 | 333 | 101 | 339 | 3.02e-29 | 116 |
| Msa1227980 | AT5G45370.6 | 29.123 | 285 | 174 | 8 | 97 | 363 | 2 | 276 | 3.18e-29 | 114 |
| Msa1227980 | AT5G45370.5 | 29.123 | 285 | 174 | 8 | 97 | 363 | 2 | 276 | 3.18e-29 | 114 |
| Msa1227980 | AT2G37450.1 | 28.746 | 327 | 165 | 7 | 7 | 330 | 4 | 265 | 4.24e-29 | 114 |
| Msa1227980 | AT4G01440.4 | 28.400 | 250 | 176 | 3 | 10 | 258 | 8 | 255 | 9.99e-28 | 110 |
| Msa1227980 | AT4G24980.1 | 28.783 | 337 | 162 | 10 | 31 | 361 | 6 | 270 | 1.60e-26 | 107 |
| Msa1227980 | AT3G30340.2 | 29.464 | 224 | 156 | 2 | 36 | 258 | 35 | 257 | 2.27e-24 | 101 |
| Msa1227980 | AT3G45870.9 | 28.800 | 250 | 166 | 2 | 8 | 246 | 8 | 256 | 6.42e-24 | 100 |
| Msa1227980 | AT3G28080.4 | 27.119 | 236 | 116 | 5 | 97 | 330 | 9 | 190 | 1.48e-22 | 94.7 |
| Msa1227980 | AT5G45370.3 | 28.235 | 255 | 155 | 8 | 127 | 363 | 74 | 318 | 1.52e-22 | 97.1 |
| Msa1227980 | AT3G28080.9 | 28.095 | 210 | 143 | 5 | 126 | 330 | 1 | 207 | 2.85e-22 | 94.4 |
| Msa1227980 | AT3G28130.3 | 26.122 | 245 | 153 | 7 | 126 | 362 | 1 | 225 | 3.15e-22 | 94.4 |
| Msa1227980 | AT3G45870.5 | 30.000 | 210 | 135 | 2 | 127 | 325 | 51 | 259 | 8.80e-22 | 94.7 |
| Msa1227980 | AT3G28080.3 | 27.119 | 236 | 116 | 5 | 97 | 330 | 98 | 279 | 1.15e-21 | 94.4 |
| Msa1227980 | AT4G01450.4 | 27.126 | 247 | 175 | 2 | 12 | 258 | 10 | 251 | 1.16e-21 | 93.6 |
| Msa1227980 | AT3G28070.5 | 28.972 | 214 | 142 | 6 | 126 | 333 | 1 | 210 | 1.40e-21 | 92.4 |
| Msa1227980 | AT4G16620.3 | 32.099 | 243 | 150 | 6 | 20 | 260 | 20 | 249 | 3.72e-21 | 92.4 |
| Msa1227980 | AT3G28070.3 | 28.444 | 225 | 137 | 7 | 97 | 308 | 101 | 314 | 3.70e-20 | 90.1 |
| Msa1227980 | AT4G01450.3 | 27.228 | 202 | 142 | 2 | 12 | 213 | 10 | 206 | 1.41e-18 | 84.3 |
| Msa1227980 | AT3G45870.6 | 28.205 | 195 | 128 | 2 | 127 | 310 | 51 | 244 | 2.78e-16 | 78.2 |
| Msa1227980 | AT3G45870.7 | 28.205 | 195 | 128 | 2 | 127 | 310 | 51 | 244 | 2.78e-16 | 78.2 |
| Msa1227980 | AT3G45870.2 | 32.394 | 142 | 95 | 1 | 184 | 325 | 43 | 183 | 2.08e-15 | 75.1 |
| Msa1227980 | AT3G28100.2 | 31.061 | 132 | 89 | 1 | 97 | 226 | 98 | 229 | 1.38e-11 | 64.7 |
Find 74 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTTATTCCTTAAATTTA+AGG | 0.107153 | 8_2:-3452756 | Msa1227980:CDS |
| GTTCCTCTTGCTTATTTATC+AGG | 0.150190 | 8_2:-3452867 | Msa1227980:CDS |
| CTTGGATGTCTGTCTCTTCT+TGG | 0.151616 | 8_2:-3451697 | Msa1227980:CDS |
| GTCTCATTAACCATCGATTT+TGG | 0.156620 | 8_2:+3449216 | None:intergenic |
| TATAATTGTTCCCACTATTT+TGG | 0.158416 | 8_2:+3451840 | None:intergenic |
| TTATTCATCACCTCACTAAT+TGG | 0.166165 | 8_2:-3452721 | Msa1227980:CDS |
| TGCACAAAGTGATATGTAAT+TGG | 0.184770 | 8_2:+3449832 | None:intergenic |
| TGGCACAAGAATGGCACTTT+TGG | 0.214514 | 8_2:-3452949 | Msa1227980:CDS |
| TGGTTTGTATATTGTACTTT+GGG | 0.221964 | 8_2:-3449280 | Msa1227980:CDS |
| ATCAACAACATAACTATTAT+TGG | 0.259697 | 8_2:+3452999 | None:intergenic |
| CACAATAATTTGTACTGTAT+TGG | 0.284384 | 8_2:-3449494 | Msa1227980:CDS |
| TATTCTGCATTTAGTAGCTT+TGG | 0.290492 | 8_2:+3451778 | None:intergenic |
| TTCTTGGATGCATTGTTGCT+TGG | 0.293997 | 8_2:-3451681 | Msa1227980:CDS |
| AGAGGAAGTGAAAATTGATT+TGG | 0.299737 | 8_2:-3449193 | Msa1227980:CDS |
| AATTAATCTTCCATGCATTA+AGG | 0.305242 | 8_2:+3449750 | None:intergenic |
| TCTTGGATGCATTGTTGCTT+GGG | 0.331416 | 8_2:-3451680 | Msa1227980:CDS |
| TTGATACAGTTCATACTTGC+AGG | 0.337079 | 8_2:-3452981 | Msa1227980:CDS |
| TTGGTTTGTATATTGTACTT+TGG | 0.366744 | 8_2:-3449281 | Msa1227980:CDS |
| CATGTATGTTATAGCTTGAT+AGG | 0.374262 | 8_2:-3449321 | Msa1227980:intron |
| TATGATATTCATTTATTCTC+TGG | 0.383863 | 8_2:+3449156 | None:intergenic |
| TATTTCCTCATGAAGCAAAA+TGG | 0.415481 | 8_2:+3449468 | None:intergenic |
| TCAATCATGGCCACAACCTT+GGG | 0.417804 | 8_2:-3451739 | Msa1227980:CDS |
| GAGAACTATAGCCAAAATAG+TGG | 0.417858 | 8_2:-3451851 | Msa1227980:CDS |
| TATTCATCACCTCACTAATT+GGG | 0.429304 | 8_2:-3452720 | Msa1227980:intron |
| ATCTTCCATGCATTAAGGTC+TGG | 0.430798 | 8_2:+3449755 | None:intergenic |
| CGGTATACTACAAATACTCT+TGG | 0.434195 | 8_2:+3452915 | None:intergenic |
| TTTGTAATAGCAGCCTTAGT+AGG | 0.434206 | 8_2:-3451992 | Msa1227980:CDS |
| GGTGCAATTGGAGTGATCAT+TGG | 0.438089 | 8_2:-3449300 | Msa1227980:CDS |
| GTACAAATTATTGTGAAAAC+AGG | 0.442998 | 8_2:+3449502 | None:intergenic |
| CATTTATTCTCTGGTAAAAG+AGG | 0.446998 | 8_2:+3449165 | None:intergenic |
| ATCAATCATGGCCACAACCT+TGG | 0.447093 | 8_2:-3451740 | Msa1227980:CDS |
| TTCAAGCATGGTGCATTTCA+AGG | 0.449157 | 8_2:-3449555 | Msa1227980:CDS |
| TTCCTCTTGCTTATTTATCA+GGG | 0.455915 | 8_2:-3452866 | Msa1227980:intron |
| TATAGCTTGATAGGTGCAAT+TGG | 0.462823 | 8_2:-3449312 | Msa1227980:intron |
| AGTATCTATTGCATTGTTGA+AGG | 0.465625 | 8_2:-3451803 | Msa1227980:CDS |
| CCTTGGGAAGTGATGAGAAT+TGG | 0.468318 | 8_2:-3451723 | Msa1227980:CDS |
| TGTGACTGCTGGAAGAAGAT+TGG | 0.474246 | 8_2:+3452015 | None:intergenic |
| CTCATCACTTCCCAAGGTTG+TGG | 0.492623 | 8_2:+3451729 | None:intergenic |
| ATACTTGCAGGTCAGACTCT+TGG | 0.509818 | 8_2:-3452969 | Msa1227980:CDS |
| GCACAAAGTGATATGTAATT+GGG | 0.510073 | 8_2:+3449833 | None:intergenic |
| ATTACATATCACTTTGTGCA+TGG | 0.514897 | 8_2:-3449829 | Msa1227980:CDS |
| GCTATTACAAATGTGACTGC+TGG | 0.515370 | 8_2:+3452004 | None:intergenic |
| GACTAGTAATTACCCTACTA+AGG | 0.515800 | 8_2:+3451979 | None:intergenic |
| TGCTGGAAGAAGATTGGAAA+TGG | 0.517028 | 8_2:+3452021 | None:intergenic |
| ATTACCTTCAAAATCAATCA+TGG | 0.519905 | 8_2:-3451752 | Msa1227980:CDS |
| GGTATACTACAAATACTCTT+GGG | 0.524786 | 8_2:+3452916 | None:intergenic |
| CAGCGCTACCAAGTTGAAGT+AGG | 0.525332 | 8_2:+3449726 | None:intergenic |
| AGTGATGAGAATTGGTTGCT+TGG | 0.525946 | 8_2:-3451715 | Msa1227980:CDS |
| TTGTAATAGCAGCCTTAGTA+GGG | 0.526679 | 8_2:-3451991 | Msa1227980:intron |
| GGAACAATTATATGTGTAAG+TGG | 0.530656 | 8_2:-3451829 | Msa1227980:CDS |
| TCAGACTCTTGGCACAAGAA+TGG | 0.551895 | 8_2:-3452958 | Msa1227980:CDS |
| CCAATTCTCATCACTTCCCA+AGG | 0.553764 | 8_2:+3451723 | None:intergenic |
| TTGGGATGACTTGCATAAGC+TGG | 0.554443 | 8_2:+3449851 | None:intergenic |
| GTATCTATTGCATTGTTGAA+GGG | 0.561664 | 8_2:-3451802 | Msa1227980:CDS |
| CTTCATGAGGAAATATACGT+TGG | 0.565456 | 8_2:-3449460 | Msa1227980:CDS |
| ATTAATTCCCTACTTCAACT+TGG | 0.571381 | 8_2:-3449734 | Msa1227980:CDS |
| GGTTTGTATATTGTACTTTG+GGG | 0.583776 | 8_2:-3449279 | Msa1227980:CDS |
| ATGAGGAAATATACGTTGGA+AGG | 0.583813 | 8_2:-3449456 | Msa1227980:intron |
| TACCCTGATAAATAAGCAAG+AGG | 0.584882 | 8_2:+3452864 | None:intergenic |
| TAGAGCCAGACCTTAATGCA+TGG | 0.585991 | 8_2:-3449760 | Msa1227980:CDS |
| GAAGATAGTTCCAAAATCGA+TGG | 0.588416 | 8_2:-3449226 | Msa1227980:CDS |
| TAATATATTGTCTTCAAGCA+TGG | 0.593863 | 8_2:-3449567 | Msa1227980:CDS |
| AGCGCTACCAAGTTGAAGTA+GGG | 0.593953 | 8_2:+3449727 | None:intergenic |
| AGAACTATAGCCAAAATAGT+GGG | 0.616313 | 8_2:-3451850 | Msa1227980:CDS |
| ACAACATAACTATTATTGGT+AGG | 0.617442 | 8_2:+3453003 | None:intergenic |
| GTAAACATAGCAGAGAAGAG+AGG | 0.639250 | 8_2:+3449526 | None:intergenic |
| GCATGGTGCATTTCAAGGAG+AGG | 0.640869 | 8_2:-3449550 | Msa1227980:CDS |
| ATCGATGGTTAATGAGACAG+AGG | 0.643418 | 8_2:-3449211 | Msa1227980:CDS |
| TTTGAGGAAGAAAAGATGGG+GGG | 0.646206 | 8_2:-3453047 | Msa1227980:exon |
| GGAAACAAACCCAATTAGTG+AGG | 0.653573 | 8_2:+3452711 | None:intergenic |
| AGCAAGAGGAACAAGAACAA+TGG | 0.659708 | 8_2:+3452878 | None:intergenic |
| TAGTGAGGTGATGAATAACA+AGG | 0.667455 | 8_2:+3452726 | None:intergenic |
| AGAGTATTTGTAGTATACCG+TGG | 0.702160 | 8_2:-3452912 | Msa1227980:CDS |
| CAATGGTTGCAAAAGCACCA+CGG | 0.718729 | 8_2:+3452895 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCAAAATTTATATTTTGA+GGG | - | chr8_2:3449916-3449935 | Msa1227980:intron | 10.0% |
| !! | AAAAAAAAATCTATATTTGA+TGG | + | chr8_2:3450471-3450490 | None:intergenic | 10.0% |
| !!! | ATACTAGTTAATATTTTATA+TGG | + | chr8_2:3451805-3451824 | None:intergenic | 10.0% |
| !! | TTAGTTAGATTAATAATAAT+TGG | + | chr8_2:3452636-3452655 | None:intergenic | 10.0% |
| !! | AAGAAAAAAACAATAAGTTA+AGG | + | chr8_2:3449194-3449213 | None:intergenic | 15.0% |
| !! | ATTATTTAGTCAAACAAAAA+AGG | + | chr8_2:3449526-3449545 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGATTTGAAAGAA+TGG | - | chr8_2:3449626-3449645 | Msa1227980:intron | 15.0% |
| !!! | ATATACTTTTATTGATGAAT+TGG | - | chr8_2:3449710-3449729 | Msa1227980:intron | 15.0% |
| !!! | TATACTTTTATTGATGAATT+GGG | - | chr8_2:3449711-3449730 | Msa1227980:intron | 15.0% |
| !!! | GAATCAAAATTTATATTTTG+AGG | - | chr8_2:3449915-3449934 | Msa1227980:intron | 15.0% |
| !! | AATAATTAAAATAAACACCT+TGG | + | chr8_2:3450071-3450090 | None:intergenic | 15.0% |
| !!! | AAGGTGTTTATTTTAATTAT+TGG | - | chr8_2:3450070-3450089 | Msa1227980:intron | 15.0% |
| !! | TTGAATAATATATTACAGAA+TGG | - | chr8_2:3450096-3450115 | Msa1227980:intron | 15.0% |
| !! | TTGTTAGAAAAGAATAATTA+AGG | + | chr8_2:3450578-3450597 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr8_2:3450879-3450898 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr8_2:3450982-3451001 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr8_2:3451006-3451025 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr8_2:3451005-3451024 | Msa1227980:intron | 15.0% |
| !!! | AAATTTTTTTCTTCCTAAAA+TGG | - | chr8_2:3451129-3451148 | Msa1227980:intron | 15.0% |
| !!! | TCTTTTCATTTTATATTAGA+TGG | - | chr8_2:3451439-3451458 | Msa1227980:intron | 15.0% |
| !!! | TTTTTCCATATCATTTATTA+AGG | + | chr8_2:3451548-3451567 | None:intergenic | 15.0% |
| !! | ATTGTAAAACGAATATAATT+TGG | - | chr8_2:3451650-3451669 | Msa1227980:intron | 15.0% |
| !! | TTGTAAAACGAATATAATTT+GGG | - | chr8_2:3451651-3451670 | Msa1227980:intron | 15.0% |
| !!! | TAATTAATACATTATTTTGC+AGG | - | chr8_2:3452384-3452403 | Msa1227980:intron | 15.0% |
| !!! | AATTAATACATTATTTTGCA+GGG | - | chr8_2:3452385-3452404 | Msa1227980:intron | 15.0% |
| !! | ATCAACAACATAACTATTAT+TGG | + | chr8_2:3448996-3449015 | None:intergenic | 20.0% |
| !! | AAGAAAAAAACAACTGTATT+TGG | - | chr8_2:3449442-3449461 | Msa1227980:intron | 20.0% |
| !! | AGAAAAAAACAACTGTATTT+GGG | - | chr8_2:3449443-3449462 | Msa1227980:intron | 20.0% |
| !!! | AGAATAGATTTTTTTGTAAG+AGG | - | chr8_2:3449579-3449598 | Msa1227980:CDS | 20.0% |
| !! | TTTGATTGAGTAACAAAAAT+AGG | + | chr8_2:3450041-3450060 | None:intergenic | 20.0% |
| !!! | AAATCTATATTTGATGGTTA+TGG | + | chr8_2:3450465-3450484 | None:intergenic | 20.0% |
| !!! | ATCTCAAGGTATTTATAAAA+AGG | + | chr8_2:3450507-3450526 | None:intergenic | 20.0% |
| !! | AAATGACTAAAAAAATCTCA+AGG | + | chr8_2:3450521-3450540 | None:intergenic | 20.0% |
| !! | ATTGTCCTTAATAAATAGTA+TGG | - | chr8_2:3450720-3450739 | Msa1227980:intron | 20.0% |
| !!! | CTTTTCCATACTATTTATTA+AGG | + | chr8_2:3450728-3450747 | None:intergenic | 20.0% |
| !! | GGAAAAGTAATAAATAGTTA+AGG | - | chr8_2:3450769-3450788 | Msa1227980:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr8_2:3450996-3451015 | Msa1227980:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr8_2:3451039-3451058 | None:intergenic | 20.0% |
| !!! | TCTTAATTATATGCCATTTT+AGG | + | chr8_2:3451145-3451164 | None:intergenic | 20.0% |
| !! | AAATGGCATATAATTAAGAA+TGG | - | chr8_2:3451146-3451165 | Msa1227980:intron | 20.0% |
| !! | ATTGTCCTTAATAAATGATA+TGG | - | chr8_2:3451540-3451559 | Msa1227980:intron | 20.0% |
| !! | AATTAAAGAATTGAAAGAAG+AGG | - | chr8_2:3451571-3451590 | Msa1227980:intron | 20.0% |
| !! | TATGAGAAAATATGCATTTA+AGG | + | chr8_2:3452066-3452085 | None:intergenic | 20.0% |
| !!! | CTTAACACAAATTGAATTTT+AGG | - | chr8_2:3452601-3452620 | Msa1227980:intron | 20.0% |
| !! | TATGATATTCATTTATTCTC+TGG | + | chr8_2:3452839-3452858 | None:intergenic | 20.0% |
| !!! | CAATAGCTTTTTTATTCAAT+TGG | - | chr8_2:3452870-3452889 | Msa1227980:CDS | 20.0% |
| !!! | TTTTGATAAACACATTGAAA+TGG | - | chr8_2:3453083-3453102 | Msa1227980:five_prime_UTR | 20.0% |
| !!! | TTTTTTGAGGAAGAAAAGAT+GGG | - | chr8_2:3448942-3448961 | Msa1227980:three_prime_UTR | 25.0% |
| ! | ACAACATAACTATTATTGGT+AGG | + | chr8_2:3448992-3449011 | None:intergenic | 25.0% |
| ! | AGAAACTAATTAAAGAGAAG+TGG | + | chr8_2:3449164-3449183 | None:intergenic | 25.0% |
| !!! | GTTTTTTTCTTCATTTTGAC+AGG | - | chr8_2:3449203-3449222 | Msa1227980:CDS | 25.0% |
| ! | GCTCTTATTCCTTAAATTTA+AGG | - | chr8_2:3449236-3449255 | Msa1227980:CDS | 25.0% |
| ! | GGAAAAACTCCTTAAATTTA+AGG | + | chr8_2:3449248-3449267 | None:intergenic | 25.0% |
| ! | TTCTTTGTCAAATTGATGAA+AGG | + | chr8_2:3449563-3449582 | None:intergenic | 25.0% |
| !! | TATAATTGTTCCCACTATTT+TGG | + | chr8_2:3450155-3450174 | None:intergenic | 25.0% |
| ! | ATTACCTTCAAAATCAATCA+TGG | - | chr8_2:3450240-3450259 | Msa1227980:intron | 25.0% |
| ! | CAAAAGGTTTATGTCAAATA+TGG | - | chr8_2:3450379-3450398 | Msa1227980:intron | 25.0% |
| ! | TAGAAAAGAATAATTAAGGC+AGG | + | chr8_2:3450574-3450593 | None:intergenic | 25.0% |
| ! | GGAAAAAGTTATTATTGCAT+TGG | + | chr8_2:3450919-3450938 | None:intergenic | 25.0% |
| ! | GAGGTAGTAATAAATAGTTA+AGG | - | chr8_2:3451590-3451609 | Msa1227980:intron | 25.0% |
| !! | TTCTAAATTATATGTCGCTT+TGG | + | chr8_2:3451688-3451707 | None:intergenic | 25.0% |
| ! | AAGCGACATATAATTTAGAA+CGG | - | chr8_2:3451688-3451707 | Msa1227980:CDS | 25.0% |
| !!! | AGTATTTTTTGTTAACTCTC+TGG | - | chr8_2:3451820-3451839 | Msa1227980:CDS | 25.0% |
| !! | TATATGGGTGAAACTATTTT+TGG | + | chr8_2:3451905-3451924 | None:intergenic | 25.0% |
| ! | AATTAATCTTCCATGCATTA+AGG | + | chr8_2:3452245-3452264 | None:intergenic | 25.0% |
| ! | TAATATATTGTCTTCAAGCA+TGG | - | chr8_2:3452425-3452444 | Msa1227980:intron | 25.0% |
| ! | GTACAAATTATTGTGAAAAC+AGG | + | chr8_2:3452493-3452512 | None:intergenic | 25.0% |
| !! | CACAATAATTTGTACTGTAT+TGG | - | chr8_2:3452498-3452517 | Msa1227980:intron | 25.0% |
| !!! | TTGGTTTGTATATTGTACTT+TGG | - | chr8_2:3452711-3452730 | Msa1227980:intron | 25.0% |
| !! | TGGTTTGTATATTGTACTTT+GGG | - | chr8_2:3452712-3452731 | Msa1227980:intron | 25.0% |
| ! | TTCAAAAACAAAATTGCATC+AGG | - | chr8_2:3452926-3452945 | Msa1227980:CDS | 25.0% |
| !!! | GTTTTTTGAGGAAGAAAAGA+TGG | - | chr8_2:3448941-3448960 | Msa1227980:three_prime_UTR | 30.0% |
| !! | TTTTTGAGGAAGAAAAGATG+GGG | - | chr8_2:3448943-3448962 | Msa1227980:three_prime_UTR | 30.0% |
| GGTATACTACAAATACTCTT+GGG | + | chr8_2:3449079-3449098 | None:intergenic | 30.0% | |
| TTCCTCTTGCTTATTTATCA+GGG | - | chr8_2:3449126-3449145 | Msa1227980:three_prime_UTR | 30.0% | |
| TTATTCATCACCTCACTAAT+TGG | - | chr8_2:3449271-3449290 | Msa1227980:CDS | 30.0% | |
| TATTCATCACCTCACTAATT+GGG | - | chr8_2:3449272-3449291 | Msa1227980:CDS | 30.0% | |
| GTAAATTACTAGAGAGAGAA+TGG | + | chr8_2:3449305-3449324 | None:intergenic | 30.0% | |
| CTAAATTATCAGCACAGTTA+TGG | + | chr8_2:3449481-3449500 | None:intergenic | 30.0% | |
| !!! | TAAAGTTTTGAGTGACTATG+TGG | - | chr8_2:3449795-3449814 | Msa1227980:CDS | 30.0% |
| ACTATGTGGTGCTTATAAAA+TGG | - | chr8_2:3449809-3449828 | Msa1227980:CDS | 30.0% | |
| CTCAATCAAAATTCAAACCA+AGG | - | chr8_2:3450051-3450070 | Msa1227980:intron | 30.0% | |
| AGAACTATAGCCAAAATAGT+GGG | - | chr8_2:3450142-3450161 | Msa1227980:intron | 30.0% | |
| GGAACAATTATATGTGTAAG+TGG | - | chr8_2:3450163-3450182 | Msa1227980:intron | 30.0% | |
| AGTATCTATTGCATTGTTGA+AGG | - | chr8_2:3450189-3450208 | Msa1227980:intron | 30.0% | |
| GTATCTATTGCATTGTTGAA+GGG | - | chr8_2:3450190-3450209 | Msa1227980:intron | 30.0% | |
| TATTCTGCATTTAGTAGCTT+TGG | + | chr8_2:3450217-3450236 | None:intergenic | 30.0% | |
| ACACGTCATATAATTTGAGA+CGG | + | chr8_2:3450618-3450637 | None:intergenic | 30.0% | |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr8_2:3451087-3451106 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr8_2:3451088-3451107 | Msa1227980:intron | 30.0% |
| CAAACAGATGGAGTAATAAA+TGG | - | chr8_2:3451205-3451224 | Msa1227980:intron | 30.0% | |
| ATTAATGGCTTCTCAATGAT+GGG | + | chr8_2:3451258-3451277 | None:intergenic | 30.0% | |
| TATTAATGGCTTCTCAATGA+TGG | + | chr8_2:3451259-3451278 | None:intergenic | 30.0% | |
| TGAGAAGCCATTAATAATGT+TGG | - | chr8_2:3451263-3451282 | Msa1227980:intron | 30.0% | |
| AGAGGAACCAACATTATTAA+TGG | + | chr8_2:3451273-3451292 | None:intergenic | 30.0% | |
| !! | TTAATAATGTTGGTTCCTCT+AGG | - | chr8_2:3451273-3451292 | Msa1227980:intron | 30.0% |
| ! | TTTTTCTATCTATGTCCTAG+AGG | + | chr8_2:3451291-3451310 | None:intergenic | 30.0% |
| ! | GCATGTGTTGTTAGTAATTT+AGG | - | chr8_2:3451403-3451422 | Msa1227980:intron | 30.0% |
| ! | GACATATAATTTAGAACGGA+GGG | - | chr8_2:3451692-3451711 | Msa1227980:CDS | 30.0% |
| AGAACCTGAGTTTGATATAT+GGG | + | chr8_2:3451920-3451939 | None:intergenic | 30.0% | |
| !! | TGGTTGATAAGCTTAACAAA+AGG | + | chr8_2:3451957-3451976 | None:intergenic | 30.0% |
| CCTAATTCATCGTTACAAAA+TGG | + | chr8_2:3452010-3452029 | None:intergenic | 30.0% | |
| ! | CCATTTTGTAACGATGAATT+AGG | - | chr8_2:3452007-3452026 | Msa1227980:CDS | 30.0% |
| TACCTGGTGAAAAGTAAAAA+GGG | + | chr8_2:3452121-3452140 | None:intergenic | 30.0% | |
| GCACAAAGTGATATGTAATT+GGG | + | chr8_2:3452162-3452181 | None:intergenic | 30.0% | |
| TGCACAAAGTGATATGTAAT+TGG | + | chr8_2:3452163-3452182 | None:intergenic | 30.0% | |
| ATTACATATCACTTTGTGCA+TGG | - | chr8_2:3452163-3452182 | Msa1227980:intron | 30.0% | |
| ATTAATTCCCTACTTCAACT+TGG | - | chr8_2:3452258-3452277 | Msa1227980:intron | 30.0% | |
| !! | ATTATTTTGCAGGGAGTTAT+GGG | - | chr8_2:3452394-3452413 | Msa1227980:intron | 30.0% |
| TATTTCCTCATGAAGCAAAA+TGG | + | chr8_2:3452527-3452546 | None:intergenic | 30.0% | |
| CATGTATGTTATAGCTTGAT+AGG | - | chr8_2:3452671-3452690 | Msa1227980:intron | 30.0% | |
| GGTTTGTATATTGTACTTTG+GGG | - | chr8_2:3452713-3452732 | Msa1227980:intron | 30.0% | |
| AGAGGAAGTGAAAATTGATT+TGG | - | chr8_2:3452799-3452818 | Msa1227980:intron | 30.0% | |
| CATTTATTCTCTGGTAAAAG+AGG | + | chr8_2:3452830-3452849 | None:intergenic | 30.0% | |
| !!! | TAAGCATCGAGTGTTTTTTG+AGG | - | chr8_2:3448929-3448948 | Msa1227980:three_prime_UTR | 35.0% |
| !! | TTTTGAGGAAGAAAAGATGG+GGG | - | chr8_2:3448944-3448963 | Msa1227980:three_prime_UTR | 35.0% |
| TTGATACAGTTCATACTTGC+AGG | - | chr8_2:3449011-3449030 | Msa1227980:three_prime_UTR | 35.0% | |
| CGGTATACTACAAATACTCT+TGG | + | chr8_2:3449080-3449099 | None:intergenic | 35.0% | |
| ! | AGAGTATTTGTAGTATACCG+TGG | - | chr8_2:3449080-3449099 | Msa1227980:three_prime_UTR | 35.0% |
| GTTCCTCTTGCTTATTTATC+AGG | - | chr8_2:3449125-3449144 | Msa1227980:three_prime_UTR | 35.0% | |
| TACCCTGATAAATAAGCAAG+AGG | + | chr8_2:3449131-3449150 | None:intergenic | 35.0% | |
| !! | CATTTTGACAGGAGAAATTC+TGG | - | chr8_2:3449214-3449233 | Msa1227980:CDS | 35.0% |
| TAGTGAGGTGATGAATAACA+AGG | + | chr8_2:3449269-3449288 | None:intergenic | 35.0% | |
| TGAGATTCTTCACTTATGCT+TGG | - | chr8_2:3449752-3449771 | Msa1227980:CDS | 35.0% | |
| ATGCTTGGTTTATAGACACA+CGG | - | chr8_2:3449767-3449786 | Msa1227980:CDS | 35.0% | |
| TTTGTAATAGCAGCCTTAGT+AGG | - | chr8_2:3450000-3450019 | Msa1227980:intron | 35.0% | |
| TTGTAATAGCAGCCTTAGTA+GGG | - | chr8_2:3450001-3450020 | Msa1227980:intron | 35.0% | |
| GACTAGTAATTACCCTACTA+AGG | + | chr8_2:3450016-3450035 | None:intergenic | 35.0% | |
| GAGAACTATAGCCAAAATAG+TGG | - | chr8_2:3450141-3450160 | Msa1227980:intron | 35.0% | |
| ! | GGCAATTTTTCTCATTTTGC+AGG | - | chr8_2:3450333-3450352 | Msa1227980:intron | 35.0% |
| ATCGATACTCTGACATCAAA+AGG | - | chr8_2:3450363-3450382 | Msa1227980:intron | 35.0% | |
| ! | GTCATATAATTTGAGACGGA+GGG | + | chr8_2:3450614-3450633 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr8_2:3450853-3450872 | None:intergenic | 35.0% |
| ! | AATTGGAGGGTACAATTGAA+AGG | + | chr8_2:3450940-3450959 | None:intergenic | 35.0% |
| TGTGCTGAGTATTAATTGGA+GGG | + | chr8_2:3450953-3450972 | None:intergenic | 35.0% | |
| GTAGTGTGCTGAGTATTAAT+TGG | + | chr8_2:3450957-3450976 | None:intergenic | 35.0% | |
| !!! | AACGACACTCATTTTGAAAC+GGG | - | chr8_2:3451089-3451108 | Msa1227980:intron | 35.0% |
| ! | TACTCCATCTGTTTGAAGTT+GGG | + | chr8_2:3451200-3451219 | None:intergenic | 35.0% |
| ! | TTACTCCATCTGTTTGAAGT+TGG | + | chr8_2:3451201-3451220 | None:intergenic | 35.0% |
| ! | CGACATATAATTTAGAACGG+AGG | - | chr8_2:3451691-3451710 | Msa1227980:CDS | 35.0% |
| AGGAAAAGACTCTGGTAATT+CGG | - | chr8_2:3451850-3451869 | Msa1227980:CDS | 35.0% | |
| TTCACCCATATATCAAACTC+AGG | - | chr8_2:3451913-3451932 | Msa1227980:intron | 35.0% | |
| GAGAACCTGAGTTTGATATA+TGG | + | chr8_2:3451921-3451940 | None:intergenic | 35.0% | |
| AAAAGTAAAAAGGGAGGCAA+AGG | + | chr8_2:3452112-3452131 | None:intergenic | 35.0% | |
| GTACCTGGTGAAAAGTAAAA+AGG | + | chr8_2:3452122-3452141 | None:intergenic | 35.0% | |
| !! | CATTATTTTGCAGGGAGTTA+TGG | - | chr8_2:3452393-3452412 | Msa1227980:intron | 35.0% |
| CTTCATGAGGAAATATACGT+TGG | - | chr8_2:3452532-3452551 | Msa1227980:intron | 35.0% | |
| ATGAGGAAATATACGTTGGA+AGG | - | chr8_2:3452536-3452555 | Msa1227980:intron | 35.0% | |
| TATAGCTTGATAGGTGCAAT+TGG | - | chr8_2:3452680-3452699 | Msa1227980:intron | 35.0% | |
| GAAGATAGTTCCAAAATCGA+TGG | - | chr8_2:3452766-3452785 | Msa1227980:CDS | 35.0% | |
| !!! | GTCTCATTAACCATCGATTT+TGG | + | chr8_2:3452779-3452798 | None:intergenic | 35.0% |
| TTTGAGGAAGAAAAGATGGG+GGG | - | chr8_2:3448945-3448964 | Msa1227980:three_prime_UTR | 40.0% | |
| ! | ACAAGAATGGCACTTTTGGA+GGG | - | chr8_2:3449047-3449066 | Msa1227980:three_prime_UTR | 40.0% |
| AGCAAGAGGAACAAGAACAA+TGG | + | chr8_2:3449117-3449136 | None:intergenic | 40.0% | |
| GGAAACAAACCCAATTAGTG+AGG | + | chr8_2:3449284-3449303 | None:intergenic | 40.0% | |
| CAACTGTATTTGGGCTGATT+TGG | - | chr8_2:3449452-3449471 | Msa1227980:intron | 40.0% | |
| TGCTGGAAGAAGATTGGAAA+TGG | + | chr8_2:3449974-3449993 | None:intergenic | 40.0% | |
| GCTATTACAAATGTGACTGC+TGG | + | chr8_2:3449991-3450010 | None:intergenic | 40.0% | |
| !! | GTGGCCATGATTGATTTTGA+AGG | + | chr8_2:3450247-3450266 | None:intergenic | 40.0% |
| AGTGATGAGAATTGGTTGCT+TGG | - | chr8_2:3450277-3450296 | Msa1227980:intron | 40.0% | |
| TTCTTGGATGCATTGTTGCT+TGG | - | chr8_2:3450311-3450330 | Msa1227980:intron | 40.0% | |
| ! | TCTTGGATGCATTGTTGCTT+GGG | - | chr8_2:3450312-3450331 | Msa1227980:intron | 40.0% |
| ! | ATAATTTGAGACGGAGGGAA+TGG | + | chr8_2:3450609-3450628 | None:intergenic | 40.0% |
| ! | CGTCATATAATTTGAGACGG+AGG | + | chr8_2:3450615-3450634 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8_2:3450849-3450868 | None:intergenic | 40.0% |
| GTGTGCTGAGTATTAATTGG+AGG | + | chr8_2:3450954-3450973 | None:intergenic | 40.0% | |
| !!! | ACGACACTCATTTTGAAACG+GGG | - | chr8_2:3451090-3451109 | Msa1227980:intron | 40.0% |
| ! | GAAACGGGGGAGTATAATTT+AGG | - | chr8_2:3451104-3451123 | Msa1227980:intron | 40.0% |
| AAGACCCAACTTCAAACAGA+TGG | - | chr8_2:3451193-3451212 | Msa1227980:intron | 40.0% | |
| ACACATGCTAACATGTGATC+TGG | - | chr8_2:3451378-3451397 | Msa1227980:intron | 40.0% | |
| !! | GTTAACTCTCTGGTTCTTAG+AGG | - | chr8_2:3451830-3451849 | Msa1227980:CDS | 40.0% |
| GTTCTTAGAGGAAAAGACTC+TGG | - | chr8_2:3451842-3451861 | Msa1227980:CDS | 40.0% | |
| GTCAGTCTATACTTACCTCA+CGG | + | chr8_2:3451883-3451902 | None:intergenic | 40.0% | |
| AACAAAAGGATGAGTCGTTC+AGG | + | chr8_2:3451943-3451962 | None:intergenic | 40.0% | |
| AGCGAAATCACTAGGTTAAC+TGG | - | chr8_2:3451981-3452000 | Msa1227980:intron | 40.0% | |
| CTGGTGAAAAGTAAAAAGGG+AGG | + | chr8_2:3452118-3452137 | None:intergenic | 40.0% | |
| !! | CTCCCTTTTTACTTTTCACC+AGG | - | chr8_2:3452116-3452135 | Msa1227980:intron | 40.0% |
| ATCTTCCATGCATTAAGGTC+TGG | + | chr8_2:3452240-3452259 | None:intergenic | 40.0% | |
| TTCAAGCATGGTGCATTTCA+AGG | - | chr8_2:3452437-3452456 | Msa1227980:intron | 40.0% | |
| GTAAACATAGCAGAGAAGAG+AGG | + | chr8_2:3452469-3452488 | None:intergenic | 40.0% | |
| ATCGATGGTTAATGAGACAG+AGG | - | chr8_2:3452781-3452800 | Msa1227980:intron | 40.0% | |
| ATACTTGCAGGTCAGACTCT+TGG | - | chr8_2:3449023-3449042 | Msa1227980:three_prime_UTR | 45.0% | |
| TCAGACTCTTGGCACAAGAA+TGG | - | chr8_2:3449034-3449053 | Msa1227980:three_prime_UTR | 45.0% | |
| ! | TGGCACAAGAATGGCACTTT+TGG | - | chr8_2:3449043-3449062 | Msa1227980:three_prime_UTR | 45.0% |
| ! | CACAAGAATGGCACTTTTGG+AGG | - | chr8_2:3449046-3449065 | Msa1227980:three_prime_UTR | 45.0% |
| !! | CAATGGTTGCAAAAGCACCA+CGG | + | chr8_2:3449100-3449119 | None:intergenic | 45.0% |
| TGTGACTGCTGGAAGAAGAT+TGG | + | chr8_2:3449980-3449999 | None:intergenic | 45.0% | |
| ATCAATCATGGCCACAACCT+TGG | - | chr8_2:3450252-3450271 | Msa1227980:intron | 45.0% | |
| TCAATCATGGCCACAACCTT+GGG | - | chr8_2:3450253-3450272 | Msa1227980:intron | 45.0% | |
| CCAATTCTCATCACTTCCCA+AGG | + | chr8_2:3450272-3450291 | None:intergenic | 45.0% | |
| CCTTGGGAAGTGATGAGAAT+TGG | - | chr8_2:3450269-3450288 | Msa1227980:intron | 45.0% | |
| CTTGGATGTCTGTCTCTTCT+TGG | - | chr8_2:3450295-3450314 | Msa1227980:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8_2:3451091-3451110 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+GGG | - | chr8_2:3451091-3451110 | Msa1227980:intron | 45.0% |
| !! | ATGGCTTCTCAATGATGGGT+GGG | + | chr8_2:3451254-3451273 | None:intergenic | 45.0% |
| ! | AATGGCTTCTCAATGATGGG+TGG | + | chr8_2:3451255-3451274 | None:intergenic | 45.0% |
| GACTCTGGTAATTCGGAGTT+CGG | - | chr8_2:3451857-3451876 | Msa1227980:CDS | 45.0% | |
| ACCAGATGAGCGAAATCACT+AGG | - | chr8_2:3451973-3451992 | Msa1227980:intron | 45.0% | |
| ACCTAGTGATTTCGCTCATC+TGG | + | chr8_2:3451977-3451996 | None:intergenic | 45.0% | |
| ! | TTGGGATGACTTGCATAAGC+TGG | + | chr8_2:3452144-3452163 | None:intergenic | 45.0% |
| TAGAGCCAGACCTTAATGCA+TGG | - | chr8_2:3452232-3452251 | Msa1227980:intron | 45.0% | |
| ! | AGCGCTACCAAGTTGAAGTA+GGG | + | chr8_2:3452268-3452287 | None:intergenic | 45.0% |
| AGCGCTGTATATGCTGTATG+TGG | - | chr8_2:3452282-3452301 | Msa1227980:intron | 45.0% | |
| GGTGCAATTGGAGTGATCAT+TGG | - | chr8_2:3452692-3452711 | Msa1227980:intron | 45.0% | |
| !! | ATTAATTAAATAATTGAAAA+AGG | - | chr8_2:3450748-3450767 | Msa1227980:intron | 5.0% |
| !! | AAATAACATTAATAATTTAT+TGG | - | chr8_2:3450804-3450823 | Msa1227980:intron | 5.0% |
| GATGGGGGGAGGTTTAAACA+TGG | - | chr8_2:3448959-3448978 | Msa1227980:three_prime_UTR | 50.0% | |
| CTCATCACTTCCCAAGGTTG+TGG | + | chr8_2:3450266-3450285 | None:intergenic | 50.0% | |
| !! | TGGCTTCTCAATGATGGGTG+GGG | + | chr8_2:3451253-3451272 | None:intergenic | 50.0% |
| GACTTGCATAAGCTGGTACC+TGG | + | chr8_2:3452137-3452156 | None:intergenic | 50.0% | |
| ! | CAGCGCTACCAAGTTGAAGT+AGG | + | chr8_2:3452269-3452288 | None:intergenic | 50.0% |
| GCATGGTGCATTTCAAGGAG+AGG | - | chr8_2:3452442-3452461 | Msa1227980:intron | 50.0% | |
| !!! | GGCTGCCATTTTGCTTCATG+AGG | - | chr8_2:3452519-3452538 | Msa1227980:intron | 50.0% |
| GAGGAAGAAAAGATGGGGGG+AGG | - | chr8_2:3448948-3448967 | Msa1227980:three_prime_UTR | 55.0% | |
| TAATTCGGAGTTCGGCCGTG+AGG | - | chr8_2:3451865-3451884 | Msa1227980:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 3448907 | 3453107 | 3448907 | ID=Msa1227980;Name=Msa1227980 |
| chr8_2 | mRNA | 3448907 | 3453107 | 3448907 | ID=Msa1227980-mRNA-1;Parent=Msa1227980;Name=Msa1227980-mRNA-1;_AED=0.12;_eAED=0.12;_QI=53|1|1|1|1|1|7|257|363 |
| chr8_2 | exon | 3448907 | 3449329 | 3448907 | ID=Msa1227980-mRNA-1:exon:1089;Parent=Msa1227980-mRNA-1 |
| chr8_2 | exon | 3449457 | 3449608 | 3449457 | ID=Msa1227980-mRNA-1:exon:1088;Parent=Msa1227980-mRNA-1 |
| chr8_2 | exon | 3449718 | 3449876 | 3449718 | ID=Msa1227980-mRNA-1:exon:1087;Parent=Msa1227980-mRNA-1 |
| chr8_2 | exon | 3451660 | 3451900 | 3451660 | ID=Msa1227980-mRNA-1:exon:1086;Parent=Msa1227980-mRNA-1 |
| chr8_2 | exon | 3451992 | 3452108 | 3451992 | ID=Msa1227980-mRNA-1:exon:1085;Parent=Msa1227980-mRNA-1 |
| chr8_2 | exon | 3452721 | 3452789 | 3452721 | ID=Msa1227980-mRNA-1:exon:1084;Parent=Msa1227980-mRNA-1 |
| chr8_2 | exon | 3452867 | 3453107 | 3452867 | ID=Msa1227980-mRNA-1:exon:1083;Parent=Msa1227980-mRNA-1 |
| chr8_2 | five_prime_UTR | 3453055 | 3453107 | 3453055 | ID=Msa1227980-mRNA-1:five_prime_utr;Parent=Msa1227980-mRNA-1 |
| chr8_2 | CDS | 3452867 | 3453054 | 3452867 | ID=Msa1227980-mRNA-1:cds;Parent=Msa1227980-mRNA-1 |
| chr8_2 | CDS | 3452721 | 3452789 | 3452721 | ID=Msa1227980-mRNA-1:cds;Parent=Msa1227980-mRNA-1 |
| chr8_2 | CDS | 3451992 | 3452108 | 3451992 | ID=Msa1227980-mRNA-1:cds;Parent=Msa1227980-mRNA-1 |
| chr8_2 | CDS | 3451660 | 3451900 | 3451660 | ID=Msa1227980-mRNA-1:cds;Parent=Msa1227980-mRNA-1 |
| chr8_2 | CDS | 3449718 | 3449876 | 3449718 | ID=Msa1227980-mRNA-1:cds;Parent=Msa1227980-mRNA-1 |
| chr8_2 | CDS | 3449457 | 3449608 | 3449457 | ID=Msa1227980-mRNA-1:cds;Parent=Msa1227980-mRNA-1 |
| chr8_2 | CDS | 3449164 | 3449329 | 3449164 | ID=Msa1227980-mRNA-1:cds;Parent=Msa1227980-mRNA-1 |
| chr8_2 | three_prime_UTR | 3448907 | 3449163 | 3448907 | ID=Msa1227980-mRNA-1:three_prime_utr;Parent=Msa1227980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
