AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1229140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229140 MtrunA17_Chr8g0335981 99.000 800 8 0 1 800 1 800 0.0 1582
Msa1229140 MtrunA17_Chr7g0250221 63.027 806 231 15 1 783 1 762 0.0 851
Msa1229140 MtrunA17_Chr8g0372111 57.241 290 120 2 192 477 392 681 2.83e-106 349
Msa1229140 MtrunA17_Chr7g0276201 29.139 302 201 9 175 474 67 357 4.12e-33 134
Msa1229140 MtrunA17_Chr7g0266451 31.020 245 161 5 216 459 102 339 8.16e-30 124
Msa1229140 MtrunA17_Chr4g0026301 29.893 281 187 6 181 458 77 350 5.27e-29 122
Msa1229140 MtrunA17_Chr1g0153181 24.016 254 170 7 217 458 34 276 2.09e-15 80.5
Msa1229140 MtrunA17_Chr4g0068631 30.508 177 102 6 216 378 89 258 1.17e-14 78.2
Msa1229140 MtrunA17_Chr6g0465751 22.134 253 178 6 217 461 27 268 1.57e-12 71.2
Msa1229140 MtrunA17_Chr2g0288251 23.792 269 171 10 217 459 62 322 3.46e-12 69.3
Msa1229140 MtrunA17_Chr3g0134141 23.504 234 160 7 217 440 26 250 5.02e-12 69.3
Msa1229140 MtrunA17_Chr7g0265341 22.353 255 175 6 217 459 72 315 2.66e-11 67.4
Msa1229140 MtrunA17_Chr0c09g0493511 22.022 277 177 9 210 460 26 289 7.81e-11 65.5
Msa1229140 MtrunA17_Chr4g0044541 27.313 227 131 6 200 402 200 416 8.42e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229140 AT2G44710.2 57.340 797 291 15 1 766 1 779 0.0 710
Msa1229140 AT2G44710.1 57.340 797 291 15 1 766 1 779 0.0 710
Msa1229140 AT2G44710.4 60.993 705 233 11 90 766 4 694 0.0 701
Msa1229140 AT2G44710.3 52.668 431 110 13 390 766 25 415 4.02e-109 341
Msa1229140 AT4G00830.2 30.225 311 189 9 153 450 53 348 2.92e-33 135
Msa1229140 AT4G00830.1 30.225 311 189 9 153 450 53 348 2.92e-33 135
Msa1229140 AT4G00830.6 30.225 311 189 9 153 450 53 348 2.92e-33 135
Msa1229140 AT4G00830.4 29.582 311 191 9 153 450 53 348 1.88e-31 129
Msa1229140 AT4G00830.3 28.939 311 185 9 153 450 53 340 4.05e-29 122
Msa1229140 AT4G00830.5 28.939 311 185 9 153 450 53 340 4.05e-29 122
Msa1229140 AT3G52660.3 28.490 351 212 8 101 448 10 324 1.80e-18 89.7
Msa1229140 AT3G52660.1 28.490 351 212 8 101 448 10 324 1.80e-18 89.7
Msa1229140 AT3G52660.2 28.490 351 212 8 101 448 10 324 1.80e-18 89.7
Msa1229140 AT2G47310.1 31.667 180 102 5 216 378 111 286 8.56e-16 81.6
Msa1229140 AT4G34110.1 23.622 254 171 6 217 458 38 280 5.99e-15 79.3
Msa1229140 AT4G34110.1 28.241 216 123 5 211 402 211 418 8.01e-11 66.2
Msa1229140 AT4G16280.3 27.586 174 111 3 216 378 121 290 1.95e-13 74.3
Msa1229140 AT4G16280.2 27.586 174 111 3 216 378 121 290 2.97e-13 73.9
Msa1229140 AT4G16280.4 27.586 174 111 3 216 378 46 215 4.98e-13 73.2
Msa1229140 AT3G16380.1 25.097 259 165 7 217 459 23 268 7.77e-13 72.4
Msa1229140 AT1G49760.1 22.742 299 188 8 210 473 128 418 1.41e-12 71.6
Msa1229140 AT1G49760.2 22.742 299 188 8 210 473 128 418 1.41e-12 71.6
Msa1229140 AT3G13224.2 31.034 145 83 5 216 348 20 159 2.47e-12 69.7
Msa1229140 AT1G71770.1 23.256 258 172 7 217 460 61 306 9.06e-12 69.3
Msa1229140 AT1G71770.2 23.256 258 172 7 217 460 61 306 9.06e-12 69.3
Msa1229140 AT2G36660.1 23.320 253 173 6 217 459 26 267 1.15e-11 68.9
Msa1229140 AT3G13224.3 31.034 145 83 5 216 348 11 150 1.21e-11 67.4
Msa1229140 AT1G22760.1 21.933 269 176 8 217 459 138 398 1.40e-11 68.6

Find 335 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCTGCAATTTCAGATTAA+TGG 0.120288 8_2:-4773131 Msa1229140:intron
GCTATTTATAGCATTATATT+TGG 0.124459 8_2:-4770178 Msa1229140:three_prime_UTR
TGCGATCCACAAAGAAATTT+AGG 0.171647 8_2:-4774891 Msa1229140:five_prime_UTR
ACTCAACATTGCTTAGAAAT+AGG 0.177085 8_2:+4769003 None:intergenic
CTATATGAATACACTATTTA+TGG 0.194206 8_2:+4769108 None:intergenic
CCTCTTCTGCAGTCTCTTAA+AGG 0.203548 8_2:+4772772 None:intergenic
CTGAAAGACGCCCAACTTAT+AGG 0.217326 8_2:-4771450 Msa1229140:CDS
CTTGTTTGGTTAAGGATTAA+TGG 0.234976 8_2:-4769907 Msa1229140:three_prime_UTR
TTCTTTCAATTTGCTATCAT+TGG 0.237245 8_2:-4768680 Msa1229140:three_prime_UTR
AAGGAGAAGTTGAAGCATTA+TGG 0.243038 8_2:-4772902 Msa1229140:CDS
TTGGGATGTGTTGGTGTTGT+AGG 0.249916 8_2:-4769694 Msa1229140:three_prime_UTR
GGACAGTGATACCCTCTATT+TGG 0.255911 8_2:-4773081 Msa1229140:CDS
GGCAGCCGAAGTTCTATTTC+TGG 0.258447 8_2:-4770865 Msa1229140:CDS
AGTAGAGTTGCTGCAGATTA+TGG 0.261306 8_2:-4771487 Msa1229140:CDS
AAACCGTGGATTTGCATTCT+TGG 0.273692 8_2:-4772825 Msa1229140:CDS
GCAGCACGAGCAGTACTTCT+AGG 0.280985 8_2:+4771391 None:intergenic
ATGACGGCCTTTGAAGCTTA+TGG 0.290365 8_2:-4770239 Msa1229140:three_prime_UTR
CGTGATTATGATTCTCTATC+TGG 0.292725 8_2:-4771268 Msa1229140:CDS
ATGTTATGAAGCTTACAATT+TGG 0.313318 8_2:-4770216 Msa1229140:three_prime_UTR
GAGAGACGAGCGTCTAGATT+TGG 0.313762 8_2:-4773724 Msa1229140:CDS
TTACATGGGCAGCGGTGGTT+CGG 0.320424 8_2:-4770484 Msa1229140:CDS
CAATAATGTCAAGGCCTTCT+TGG 0.321408 8_2:-4771834 Msa1229140:CDS
GTAGAAGATTCTAATGATAA+AGG 0.321671 8_2:-4772851 Msa1229140:CDS
GCGATCCACAAAGAAATTTA+GGG 0.321865 8_2:-4774890 Msa1229140:five_prime_UTR
AAATAATTACTATGCGAAAT+CGG 0.321968 8_2:+4769509 None:intergenic
ACAGATCCGACATAATAAAT+TGG 0.322938 8_2:-4770272 Msa1229140:intron
AGAAGATGAAGAGGAGGTTA+AGG 0.326174 8_2:-4773766 Msa1229140:CDS
CGGAATCTTCTGAAGAAATA+TGG 0.327291 8_2:-4772166 Msa1229140:CDS
GACTATGGATTTGTTACCTT+TGG 0.329610 8_2:-4772091 Msa1229140:CDS
CAGCATTACTGGTACAGAAT+TGG 0.331570 8_2:-4772038 Msa1229140:CDS
AGTAATAAGAATACTACTTC+AGG 0.334390 8_2:-4769744 Msa1229140:three_prime_UTR
GTTATTGAATTTGTGATGTA+TGG 0.337285 8_2:-4770083 Msa1229140:three_prime_UTR
TGCTCCAATACCATTTCATT+TGG 0.338317 8_2:-4769955 Msa1229140:three_prime_UTR
GTCTTCGGAGGCATTGTTAT+TGG 0.339548 8_2:+4774855 None:intergenic
TTGATGCACTTCCTCCTTCA+TGG 0.343649 8_2:-4772204 Msa1229140:CDS
AGATGTGCTGACAGCATTAC+TGG 0.343835 8_2:-4772049 Msa1229140:CDS
ATTGGGTGAAGGTGACAAAA+AGG 0.345418 8_2:-4772020 Msa1229140:intron
ACTCTAGTTTAGCTCTTGTT+AGG 0.347194 8_2:-4768752 Msa1229140:three_prime_UTR
GGCTAGAGATGCTACTTGTT+TGG 0.347463 8_2:-4769921 Msa1229140:three_prime_UTR
AGATGCTACTTGTTTGGTTA+AGG 0.350748 8_2:-4769915 Msa1229140:three_prime_UTR
CGAAACCCTAAATTTCTTTG+TGG 0.355378 8_2:+4774885 None:intergenic
CTATTTATAGCATTATATTT+GGG 0.356269 8_2:-4770177 Msa1229140:three_prime_UTR
AAAGAATTTGAAGTATTTGT+TGG 0.357926 8_2:-4773408 Msa1229140:CDS
TTAAGAAGATATTGCTCGTT+AGG 0.359179 8_2:-4769058 Msa1229140:three_prime_UTR
CTCAACATTGCTTAGAAATA+GGG 0.362973 8_2:+4769004 None:intergenic
TCTGCAGCAACTCTACTTCT+TGG 0.363608 8_2:+4771493 None:intergenic
TGAAAGACGCCCAACTTATA+GGG 0.364958 8_2:-4771449 Msa1229140:CDS
GTTGGTGAAGAAGGTGATTC+AGG 0.368423 8_2:-4773579 Msa1229140:CDS
AAAGAGATGTTTAGTTACTT+TGG 0.370338 8_2:-4769833 Msa1229140:three_prime_UTR
TCACTGGGCGTGGGTTATTA+CGG 0.372222 8_2:-4768889 Msa1229140:three_prime_UTR
TGTTAGGTAACATACCTATA+TGG 0.373043 8_2:-4768787 Msa1229140:three_prime_UTR
TACATGGGCAGCGGTGGTTC+GGG 0.376852 8_2:-4770483 Msa1229140:CDS
AAGAATTTGAAGTATTTGTT+GGG 0.376985 8_2:-4773407 Msa1229140:CDS
TCTGCAAATGAAACCTTTGC+AGG 0.379216 8_2:+4772725 None:intergenic
TCATATTCATCAATGTATTC+TGG 0.380188 8_2:-4770531 Msa1229140:CDS
AGCAGTGTGAAGAGAGATTA+TGG 0.381697 8_2:-4771538 Msa1229140:CDS
GAACCTCTCTTTGGCGTCTT+CGG 0.383318 8_2:+4774840 None:intergenic
TCGCGTGGGGTAAGAGGAAT+TGG 0.383971 8_2:-4771781 Msa1229140:CDS
AATTTAATTAATATATTCAC+TGG 0.386689 8_2:-4768905 Msa1229140:three_prime_UTR
ACTCAAGACAACCAACGATA+TGG 0.390525 8_2:+4769144 None:intergenic
GATTAAAGGTGCAATCGAAC+GGG 0.391043 8_2:+4768580 None:intergenic
TTCTCGTCGCGTGGGGTAAG+AGG 0.394358 8_2:-4771787 Msa1229140:CDS
TGTTTGCTTTGCTGTACTGC+AGG 0.395507 8_2:-4768832 Msa1229140:three_prime_UTR
CATAATAAATTGGCTGCAAT+AGG 0.395636 8_2:-4770262 Msa1229140:three_prime_UTR
CTGTCCAAATGAAATGGTAT+TGG 0.397342 8_2:+4769951 None:intergenic
TGAAAATAAAGTAGCAGAAA+AGG 0.404059 8_2:-4769385 Msa1229140:three_prime_UTR
ATCACCGTCTTCTCTTCAAC+AGG 0.406089 8_2:+4774732 None:intergenic
CAACTCCCGACCCACATTGT+TGG 0.407711 8_2:-4769204 Msa1229140:three_prime_UTR
GACAGTGATACCCTCTATTT+GGG 0.407780 8_2:-4773080 Msa1229140:CDS
ATAGCTTTATCTTCAACAAC+AGG 0.413355 8_2:+4774642 None:intergenic
GCTCTCATCAAGCTCTTGTT+AGG 0.413863 8_2:-4768803 Msa1229140:three_prime_UTR
CAGAAGAGGGATGTTACGTT+TGG 0.419497 8_2:-4772758 Msa1229140:CDS
TGCATATGTTTCCCAAATAG+AGG 0.423070 8_2:+4773069 None:intergenic
AATAATTACTATGCGAAATC+GGG 0.424824 8_2:+4769510 None:intergenic
TCTGGTAGGGGCACGGGTGG+CGG 0.427281 8_2:-4770513 Msa1229140:CDS
TCACAGTACGGTGATGCTTA+TGG 0.427536 8_2:-4771016 Msa1229140:CDS
GGAAGATCTAGTCTTGGATA+TGG 0.430356 8_2:-4770892 Msa1229140:CDS
GAAGTCGTGCTCCGCCAATC+AGG 0.430648 8_2:-4771759 Msa1229140:CDS
TTAATTAAATTATTAAATGC+AGG 0.434111 8_2:+4768917 None:intergenic
GCAAATGAACCAACATAAAT+CGG 0.435326 8_2:-4769294 Msa1229140:three_prime_UTR
GAGGTGGCCTCTCATACCTT+TGG 0.437240 8_2:+4771335 None:intergenic
CTTGTCAATTCAAGCTATCT+CGG 0.438251 8_2:-4770133 Msa1229140:three_prime_UTR
AGCTTGATTTAGAAAAGCTC+GGG 0.442733 8_2:-4769317 Msa1229140:three_prime_UTR
CTACCCGCTGAACCTCTCTT+TGG 0.444963 8_2:+4774831 None:intergenic
GGGTGGCGGTAGCAGTTACA+TGG 0.445852 8_2:-4770499 Msa1229140:CDS
ATTAATATATTCACTGGGCG+TGG 0.447220 8_2:-4768899 Msa1229140:three_prime_UTR
GACAACCAACGATATGGTTC+GGG 0.447264 8_2:+4769150 None:intergenic
AGACAACCAACGATATGGTT+CGG 0.450861 8_2:+4769149 None:intergenic
CGTTCATATATGCATATGAA+TGG 0.451547 8_2:-4768726 Msa1229140:three_prime_UTR
CTTCAGTAGCATCCTTGTCT+AGG 0.455597 8_2:+4773382 None:intergenic
GTGAACATTTATATCCATAT+AGG 0.457194 8_2:+4768773 None:intergenic
TGATGAGAAGGAAATTGAAC+AGG 0.459626 8_2:-4773652 Msa1229140:CDS
GGTAGTGGCCTACTTCTAAC+TGG 0.460415 8_2:+4771697 None:intergenic
ACTCCAATCGAGCTCTTGAT+TGG 0.460826 8_2:+4771059 None:intergenic
TCTGCTGAATGTATCAAAGT+TGG 0.463094 8_2:-4769876 Msa1229140:three_prime_UTR
GCTCGATTGGAGTATGACTA+TGG 0.463175 8_2:-4771049 Msa1229140:CDS
TGATGCACTTCCTCCTTCAT+GGG 0.463181 8_2:-4772203 Msa1229140:CDS
ATGTATTCTGGTAGGGGCAC+GGG 0.463809 8_2:-4770519 Msa1229140:CDS
TGGTCTCTGTCCAAATGAAA+TGG 0.464020 8_2:+4769945 None:intergenic
GATCTAGCTGGAGGAGGTAG+TGG 0.465085 8_2:+4771682 None:intergenic
AGCATTACTGGTACAGAATT+GGG 0.466603 8_2:-4772037 Msa1229140:CDS
AGTCGGCAGGGCATGAGTTA+TGG 0.470717 8_2:-4770817 Msa1229140:CDS
CAACAATGTGGGTCGGGAGT+TGG 0.472402 8_2:+4769205 None:intergenic
GGTTCGGGATCTTATTATTG+AGG 0.473492 8_2:-4770468 Msa1229140:intron
TTCAGGCCAAAGTGAGGGCT+AGG 0.475005 8_2:-4771930 Msa1229140:intron
ATTGACAAAGAAATCACAAA+TGG 0.476354 8_2:-4769269 Msa1229140:three_prime_UTR
GCTGCTCGTAGAAAGGACTA+TGG 0.479913 8_2:-4772106 Msa1229140:CDS
GAGTATGAACCTGAGGAGTA+TGG 0.481139 8_2:-4773687 Msa1229140:CDS
ATGTGGTGTTACTCCGAGTC+AGG 0.485653 8_2:-4773102 Msa1229140:CDS
TTGGGGTTGTGACTGAGGTC+AGG 0.486683 8_2:-4773332 Msa1229140:CDS
AGCTATCTCGGGTCTTCTCT+AGG 0.487176 8_2:-4770121 Msa1229140:three_prime_UTR
GGTGGATAATCCCTATAAGT+TGG 0.487528 8_2:+4771439 None:intergenic
TTCATCAATGTATTCTGGTA+GGG 0.489027 8_2:-4770526 Msa1229140:CDS
TAACATTATCCACCCACAAA+TGG 0.489703 8_2:+4769990 None:intergenic
ATTATCTTGCAGTCCACCTC+AGG 0.491057 8_2:+4769580 None:intergenic
TTTCATATTCACTTGAGTGA+TGG 0.491336 8_2:+4769403 None:intergenic
TGGGGTGTATAGCAGTCGGC+AGG 0.491775 8_2:-4770830 Msa1229140:CDS
AAACTATGCAGGTTACTAGA+TGG 0.492265 8_2:+4769533 None:intergenic
GGGCGTCCTTCACGATAACT+TGG 0.494376 8_2:+4771292 None:intergenic
TTGTGAAGGAGAGGCGAAAA+CGG 0.494590 8_2:-4773431 Msa1229140:CDS
CCCCGTAGTTTCTCGTCGCG+TGG 0.495353 8_2:-4771796 Msa1229140:CDS
GACAACCAACAATGTGGGTC+GGG 0.497247 8_2:+4769199 None:intergenic
GGTGATTGAAGAAGAGATCA+AGG 0.499484 8_2:-4774715 Msa1229140:CDS
CATGCCAGCTGCTCGTAGAA+AGG 0.501010 8_2:-4772113 Msa1229140:CDS
CGAGGAAAACATGTTGGTCG+TGG 0.504059 8_2:-4771883 Msa1229140:CDS
TAGCTTGATTTAGAAAAGCT+CGG 0.505512 8_2:-4769318 Msa1229140:three_prime_UTR
AAATGTTGAGGATATAACTT+TGG 0.505813 8_2:-4772873 Msa1229140:CDS
GTGGATAATCCCTATAAGTT+GGG 0.506076 8_2:+4771440 None:intergenic
TTGATTTATGATACCATTTG+TGG 0.506608 8_2:-4770003 Msa1229140:three_prime_UTR
CTTCTATCATAAGATCTAGC+TGG 0.506659 8_2:+4771670 None:intergenic
TTAGCATCTTCTACAGCCTC+AGG 0.507277 8_2:+4774600 None:intergenic
AGATGGTCATGATGAAATTG+AGG 0.507610 8_2:-4773541 Msa1229140:CDS
TGTCTATACCAGTTAGAAGT+AGG 0.507727 8_2:-4771705 Msa1229140:CDS
CTTTAGCTTCTGCATTGTAG+TGG 0.508113 8_2:-4769432 Msa1229140:three_prime_UTR
ATTCATCAATGTATTCTGGT+AGG 0.509049 8_2:-4770527 Msa1229140:CDS
TAAATCAAGCTAGGTAGGGT+GGG 0.514078 8_2:+4769329 None:intergenic
GAACTGATAATATTTGCTGC+TGG 0.515056 8_2:-4769629 Msa1229140:three_prime_UTR
GGCATGTACTCATCAAGTTA+TGG 0.517277 8_2:-4770679 Msa1229140:CDS
ACAAATGGTATCATAAATCA+AGG 0.517968 8_2:+4770005 None:intergenic
TTGAAAAGATTGAGCTTGCA+AGG 0.519002 8_2:-4772138 Msa1229140:CDS
ATGAATACACTATTTATGGT+AGG 0.519124 8_2:+4769112 None:intergenic
ACGATAACTTGGATGGGAAG+GGG 0.520335 8_2:+4771303 None:intergenic
TGTCAATGACCGATTTATGT+TGG 0.520554 8_2:+4769285 None:intergenic
TAGTCCTTTCTACGAGCAGC+TGG 0.522172 8_2:+4772109 None:intergenic
TCGCCAATCAAGAGCTCGAT+TGG 0.522669 8_2:-4771062 Msa1229140:CDS
CACGATAACTTGGATGGGAA+GGG 0.522951 8_2:+4771302 None:intergenic
TTGCAGCCAATTTATTATGT+CGG 0.523352 8_2:+4770266 None:intergenic
GTTTGCTTTGCTGTACTGCA+GGG 0.523702 8_2:-4768831 Msa1229140:three_prime_UTR
GGCGGTGATTACGTTTCTCG+TGG 0.524345 8_2:-4770658 Msa1229140:CDS
TTAATATATTCACTGGGCGT+GGG 0.524594 8_2:-4768898 Msa1229140:three_prime_UTR
AAGAGAGGTTCAGCGGGTAG+TGG 0.526935 8_2:-4774828 Msa1229140:CDS
GAAGAAAATGTTGGTGAAGA+AGG 0.528899 8_2:-4773588 Msa1229140:CDS
GGATTATCTTCTTCCACCAC+AGG 0.529137 8_2:+4774663 None:intergenic
CCCCACGCGACGAGAAACTA+CGG 0.529221 8_2:+4771794 None:intergenic
CCTCTCTTTGGCGTCTTCGG+AGG 0.529474 8_2:+4774843 None:intergenic
GACGAGAAACTACGGGGTGC+AGG 0.529835 8_2:+4771802 None:intergenic
TGATGAAATTGAGGGAGAAG+AGG 0.531641 8_2:-4773532 Msa1229140:CDS
TGATTTATGATACCATTTGT+GGG 0.531763 8_2:-4770002 Msa1229140:three_prime_UTR
TTCCTCCCGCTCAGATGCAA+TGG 0.532515 8_2:-4772798 Msa1229140:CDS
AATGTATTCTGGTAGGGGCA+CGG 0.532761 8_2:-4770520 Msa1229140:CDS
TCATATAGTATACATCTTGA+AGG 0.532816 8_2:-4769093 Msa1229140:three_prime_UTR
TTGTCAATTCAAGCTATCTC+GGG 0.532836 8_2:-4770132 Msa1229140:three_prime_UTR
TGATTAAAGGTGCAATCGAA+CGG 0.534453 8_2:+4768579 None:intergenic
GTCCTTCACGATAACTTGGA+TGG 0.535270 8_2:+4771296 None:intergenic
TGGGTTATTACGGACTGACT+TGG 0.535832 8_2:-4768879 Msa1229140:three_prime_UTR
CTAAATCAAGCTAGGTAGGG+TGG 0.535850 8_2:+4769328 None:intergenic
TCTAGTCTTGGATATGGTAG+TGG 0.536113 8_2:-4770886 Msa1229140:CDS
GAAGGAAATTGAACAGGAAG+AGG 0.536425 8_2:-4773646 Msa1229140:CDS
TGAGGTGGGAGATGAAGTTG+AGG 0.536948 8_2:-4773619 Msa1229140:CDS
TTTCCTCGGCCTCTCTGAAG+TGG 0.538452 8_2:+4771898 None:intergenic
ATCTCGGGTCTTCTCTAGGT+GGG 0.538541 8_2:-4770117 Msa1229140:three_prime_UTR
AAATCAAGCTAGGTAGGGTG+GGG 0.539434 8_2:+4769330 None:intergenic
GGTGGCAGTGCTTCACAGTA+CGG 0.540610 8_2:-4771028 Msa1229140:CDS
TTTGACAGAAGATGAAGAGG+AGG 0.540760 8_2:-4773772 Msa1229140:intron
ATAACATCCATAAGCTTCAA+AGG 0.541184 8_2:+4770232 None:intergenic
TCCTTCACGATAACTTGGAT+GGG 0.541440 8_2:+4771297 None:intergenic
TGACCGTGAGCGTGCGGAGA+TGG 0.541802 8_2:-4773484 Msa1229140:CDS
GGATGACGAGCATGCTGATG+AGG 0.542036 8_2:-4773511 Msa1229140:CDS
ACAAGTAGCATCTCTAGCCT+TGG 0.543111 8_2:+4769925 None:intergenic
GGCATCCATTGCATCTGAGC+GGG 0.544260 8_2:+4772793 None:intergenic
AAGTGAGGGCTAGGTTATCA+AGG 0.544468 8_2:-4771921 Msa1229140:CDS
TCATCCACGTAACCTCTCCT+AGG 0.544554 8_2:+4771367 None:intergenic
TGAATACACTATTTATGGTA+GGG 0.545218 8_2:+4769113 None:intergenic
AGGCCACTTCAGAGAGGCCG+AGG 0.545426 8_2:-4771901 Msa1229140:CDS
CTAGCACTGATAGACCTGAT+TGG 0.546036 8_2:+4771745 None:intergenic
ATATGGTTCGGGAGTTGGAA+AGG 0.546047 8_2:+4769161 None:intergenic
ACGCCAAAGAGAGGTTCAGC+GGG 0.548771 8_2:-4774834 Msa1229140:CDS
TTTAGCTTCTGCATTGTAGT+GGG 0.549715 8_2:-4769431 Msa1229140:three_prime_UTR
GCAGCAACTCTACTTCTTGG+AGG 0.550856 8_2:+4771496 None:intergenic
GCGAAATCGGGAAACTATGC+AGG 0.552820 8_2:+4769522 None:intergenic
GCAGGTCGGCTGCTCCAAGA+AGG 0.553373 8_2:+4771820 None:intergenic
CCTTTAAGAGACTGCAGAAG+AGG 0.553892 8_2:-4772772 Msa1229140:CDS
TGATAACCTAGCCCTCACTT+TGG 0.554695 8_2:+4771924 None:intergenic
AGCGGGTAGTGGTTCAAAGA+GGG 0.555066 8_2:-4774817 Msa1229140:CDS
GCATATGTTTCCCAAATAGA+GGG 0.556114 8_2:+4773070 None:intergenic
CGATAACTTGGATGGGAAGG+GGG 0.557684 8_2:+4771304 None:intergenic
TTTCTAAATCAAGCTAGGTA+GGG 0.557945 8_2:+4769325 None:intergenic
TAAAATGAATACTTATGCAT+AGG 0.558067 8_2:+4768957 None:intergenic
GGGGACTATCGCCCGAGTCG+CGG 0.559741 8_2:-4771862 Msa1229140:CDS
GTGTTGTAGGATTTGTGACA+TGG 0.559819 8_2:-4769681 Msa1229140:three_prime_UTR
ACGGTGATGCTTATGGTGAT+AGG 0.560365 8_2:-4771009 Msa1229140:intron
ACAAGGGATTTGCATTCTTG+CGG 0.561118 8_2:-4773281 Msa1229140:CDS
CAGCACGAGCAGTACTTCTA+GGG 0.561773 8_2:+4771392 None:intergenic
TCACGATAACTTGGATGGGA+AGG 0.562072 8_2:+4771301 None:intergenic
TCATCAATGTATTCTGGTAG+GGG 0.563889 8_2:-4770525 Msa1229140:CDS
TCTTATGATAGAAGACCAGC+TGG 0.564284 8_2:-4771661 Msa1229140:intron
ACAGGAAGAGGGACATGAGG+TGG 0.565462 8_2:-4773634 Msa1229140:CDS
TATGGTTCGGGAGTTGGAAA+GGG 0.565701 8_2:+4769162 None:intergenic
AGACGAGCGTCTAGATTTGG+AGG 0.566469 8_2:-4773721 Msa1229140:CDS
TTGCTGCAGATTATGGATCA+AGG 0.567085 8_2:-4771480 Msa1229140:CDS
GGCGAGGAAGAAGTCGAAGA+TGG 0.567156 8_2:-4773558 Msa1229140:CDS
AGGAGAGGTTACGTGGATGA+TGG 0.568734 8_2:-4771364 Msa1229140:CDS
GGGTGATGAAATTATGTCAC+AGG 0.569604 8_2:-4772687 Msa1229140:intron
AGAATTTGAAGTATTTGTTG+GGG 0.569779 8_2:-4773406 Msa1229140:CDS
AGCAGCATCGTGTGAGCCAA+AGG 0.572202 8_2:+4772075 None:intergenic
TATGGCGGTAATGATGTTGG+AGG 0.573247 8_2:-4770700 Msa1229140:CDS
TCAACCCCACCATACTCCTC+AGG 0.573263 8_2:+4773678 None:intergenic
CAACTCCCGAACCATATCGT+TGG 0.573646 8_2:-4769155 Msa1229140:three_prime_UTR
GTTCCTGTGATGTAGGTTGG+TGG 0.574215 8_2:-4770558 Msa1229140:intron
GATGGTCATGATGAAATTGA+GGG 0.574247 8_2:-4773540 Msa1229140:CDS
TGCAGAAGCTAAAGATTCTG+TGG 0.576513 8_2:+4769441 None:intergenic
TGGAGTTGATAAGCCTGCAA+AGG 0.576604 8_2:-4772738 Msa1229140:CDS
AGAAGAGAATCTCGTTGTTG+AGG 0.578538 8_2:-4774691 Msa1229140:CDS
ATTCTTGCGGTTTGAAAATG+TGG 0.580185 8_2:-4773268 Msa1229140:CDS
TATTCTGGTAGGGGCACGGG+TGG 0.580301 8_2:-4770516 Msa1229140:CDS
AGCAGTTACATGGGCAGCGG+TGG 0.581899 8_2:-4770489 Msa1229140:CDS
GGACTCAAGTTAGTGAGCGA+TGG 0.582663 8_2:-4770062 Msa1229140:three_prime_UTR
CTTCTTTCAGGCCAAAGTGA+GGG 0.583789 8_2:-4771935 Msa1229140:intron
GAGGAAAACATGTTGGTCGT+GGG 0.584426 8_2:-4771882 Msa1229140:CDS
TCTTCTTTCAGGCCAAAGTG+AGG 0.584613 8_2:-4771936 Msa1229140:intron
ATAAGTTGGGCGTCTTTCAG+AGG 0.585266 8_2:+4771453 None:intergenic
TCTTATGGCGGTAATGATGT+TGG 0.585997 8_2:-4770703 Msa1229140:CDS
GGTAGCAGTTACATGGGCAG+CGG 0.586041 8_2:-4770492 Msa1229140:CDS
AGTATACATCTTGAAGGAGG+AGG 0.586205 8_2:-4769087 Msa1229140:three_prime_UTR
GCGTGCGGAGATGGCTGATG+TGG 0.586432 8_2:-4773475 Msa1229140:CDS
CTTTAAGAGACTGCAGAAGA+GGG 0.587293 8_2:-4772771 Msa1229140:CDS
ATTCCAAGAATGCAAATCCA+CGG 0.588526 8_2:+4772822 None:intergenic
ATTATTGCAGATCCGCGACT+CGG 0.588971 8_2:+4771850 None:intergenic
TGAATGTACTTCATGCACCC+TGG 0.589383 8_2:-4769360 Msa1229140:three_prime_UTR
ATGAACCTGAGGAGTATGGT+GGG 0.592467 8_2:-4773683 Msa1229140:CDS
CTAACTGGTATAGACATGAC+AGG 0.592654 8_2:+4771712 None:intergenic
TTCCGATCAGGCTCTTATGG+CGG 0.592662 8_2:-4770715 Msa1229140:intron
TCATAAGATCTAGCTGGAGG+AGG 0.592974 8_2:+4771676 None:intergenic
TTATGGAGTTACAAATGTTG+AGG 0.593298 8_2:-4772885 Msa1229140:CDS
GCAACTCTACTTCTTGGAGG+TGG 0.594233 8_2:+4771499 None:intergenic
TACTCCTCAGGTTCATACTC+AGG 0.594399 8_2:+4773690 None:intergenic
ATTTAATTAATATATTCACT+GGG 0.594789 8_2:-4768904 Msa1229140:three_prime_UTR
CACATGGGGTGTATAGCAGT+CGG 0.596161 8_2:-4770834 Msa1229140:CDS
CGGCAGGGCATGAGTTATGG+TGG 0.596513 8_2:-4770814 Msa1229140:CDS
AGGGTATCACTGTCCTGACT+CGG 0.597119 8_2:+4773089 None:intergenic
TTATTGCAGATCCGCGACTC+GGG 0.598224 8_2:+4771851 None:intergenic
CTTGACCAGAAATAGAACTT+CGG 0.598989 8_2:+4770860 None:intergenic
ATTTCTGGTCAAGATTCACA+TGG 0.599253 8_2:-4770850 Msa1229140:CDS
AATCAAGCTAGGTAGGGTGG+GGG 0.600211 8_2:+4769331 None:intergenic
ATCGTGAAGTTGTGAAGGAG+AGG 0.601698 8_2:-4773440 Msa1229140:CDS
CAGCGGGTAGTGGTTCAAAG+AGG 0.603447 8_2:-4774818 Msa1229140:CDS
TGGGAAACATATGCAAAACA+TGG 0.603494 8_2:-4773061 Msa1229140:CDS
GGAACATCGTGAAGTTGTGA+AGG 0.603844 8_2:-4773445 Msa1229140:CDS
GAAGAACCTGAAGAAAATGT+TGG 0.605476 8_2:-4773597 Msa1229140:CDS
TGATTGGCGAGCACCAGTAT+CGG 0.605757 8_2:+4771075 None:intergenic
AGAGTCGGAAGATCTAGTCT+TGG 0.608797 8_2:-4770898 Msa1229140:CDS
CCGTAGTTTCTCGTCGCGTG+GGG 0.609247 8_2:-4771794 Msa1229140:CDS
AGACAACCAACAATGTGGGT+CGG 0.609812 8_2:+4769198 None:intergenic
CCTCCGAAGACGCCAAAGAG+AGG 0.610557 8_2:-4774843 Msa1229140:CDS
TGGATGATGGTTACAGCCAA+AGG 0.611800 8_2:-4771351 Msa1229140:CDS
CAGGAAGAGGGACATGAGGT+GGG 0.612912 8_2:-4773633 Msa1229140:CDS
CAGATTAATGGAAAACAATG+TGG 0.614039 8_2:-4773119 Msa1229140:CDS
ATCCATTGCATCTGAGCGGG+AGG 0.615124 8_2:+4772796 None:intergenic
TACTGAAGATGATCTGAGGA+AGG 0.616779 8_2:-4773367 Msa1229140:CDS
ACATAATCTTCATCCCATGA+AGG 0.617754 8_2:+4772190 None:intergenic
TCCCATCCAAGTTATCGTGA+AGG 0.617871 8_2:-4771298 Msa1229140:CDS
TGAACCTGTTGAAGAGAAGA+CGG 0.620053 8_2:-4774736 Msa1229140:CDS
GCGGGTAGTGGTTCAAAGAG+GGG 0.620078 8_2:-4774816 Msa1229140:CDS
TATCTCGGGTCTTCTCTAGG+TGG 0.620442 8_2:-4770118 Msa1229140:three_prime_UTR
ATCAAGCTAGGTAGGGTGGG+GGG 0.620776 8_2:+4769332 None:intergenic
TTTCATTTGGACAGAGACCA+AGG 0.620910 8_2:-4769942 Msa1229140:three_prime_UTR
GCACTGATAGACCTGATTGG+CGG 0.621354 8_2:+4771748 None:intergenic
TATGAATCAAATTGCTCCTG+AGG 0.621990 8_2:-4774616 Msa1229140:CDS
GGAGCATGACCGTGAGCGTG+CGG 0.623217 8_2:-4773490 Msa1229140:CDS
TGGGGTTGACTATGATGAGA+AGG 0.623447 8_2:-4773664 Msa1229140:CDS
AGAGGCCGAGGAAAACATGT+TGG 0.624816 8_2:-4771889 Msa1229140:CDS
TTTCTGGTCAAGATTCACAT+GGG 0.629433 8_2:-4770849 Msa1229140:CDS
AAGGAAATTGAACAGGAAGA+GGG 0.629624 8_2:-4773645 Msa1229140:CDS
CTCAAGACAACCAACAATGT+GGG 0.630768 8_2:+4769194 None:intergenic
GTGTGAAGAGAGATTATGGT+CGG 0.631539 8_2:-4771534 Msa1229140:CDS
AGAAACTACGGGGTGCAGGT+CGG 0.632474 8_2:+4771806 None:intergenic
ATTAAAGGTGCAATCGAACG+GGG 0.635393 8_2:+4768581 None:intergenic
TGAAGTTGGGGTTGTGACTG+AGG 0.635514 8_2:-4773337 Msa1229140:CDS
CAGGGCATGAGTTATGGTGG+AGG 0.638372 8_2:-4770811 Msa1229140:intron
AATTGGCTGCAATAGGATGA+CGG 0.638558 8_2:-4770255 Msa1229140:three_prime_UTR
GTTACAGCCAAAGGTATGAG+AGG 0.639419 8_2:-4771342 Msa1229140:CDS
GTACTGCTCGTGCTGCACCT+AGG 0.640481 8_2:-4771384 Msa1229140:CDS
AATGATAAAGGAACAAACCG+TGG 0.644326 8_2:-4772839 Msa1229140:CDS
ACTCAAGACAACCAACAATG+TGG 0.644646 8_2:+4769193 None:intergenic
GCGGATCTGCAATAATGTCA+AGG 0.645997 8_2:-4771843 Msa1229140:CDS
GATGGCTGATGTGGATGAAG+AGG 0.646717 8_2:-4773466 Msa1229140:CDS
CATATGCAAAACATGGACAA+AGG 0.647157 8_2:-4773054 Msa1229140:CDS
AGGAAAACATGTTGGTCGTG+GGG 0.647706 8_2:-4771881 Msa1229140:CDS
TGATCCTGAGTATGAACCTG+AGG 0.648209 8_2:-4773694 Msa1229140:CDS
GACGCCAAAGAGAGGTTCAG+CGG 0.648754 8_2:-4774835 Msa1229140:CDS
GCTCGTGCTGCACCTAGGAG+AGG 0.649097 8_2:-4771379 Msa1229140:CDS
ACTGGTACAGAATTGGGTGA+AGG 0.649153 8_2:-4772031 Msa1229140:CDS
ATGCTACTGAAGATGATCTG+AGG 0.650341 8_2:-4773371 Msa1229140:CDS
TATAGTATACATCTTGAAGG+AGG 0.651097 8_2:-4769090 Msa1229140:three_prime_UTR
TAATCTTCATCCCATGAAGG+AGG 0.656027 8_2:+4772193 None:intergenic
TGAACAGGAAGAGGGACATG+AGG 0.656320 8_2:-4773637 Msa1229140:CDS
GGGGTGTATAGCAGTCGGCA+GGG 0.660281 8_2:-4770829 Msa1229140:CDS
GGTGGCGGTAGCAGTTACAT+GGG 0.660439 8_2:-4770498 Msa1229140:CDS
TGCACCTAGGAGAGGTTACG+TGG 0.661010 8_2:-4771371 Msa1229140:CDS
GAATTTGAAGTATTTGTTGG+GGG 0.661371 8_2:-4773405 Msa1229140:CDS
CTATCATAAGATCTAGCTGG+AGG 0.665556 8_2:+4771673 None:intergenic
TTCTGGTCAAGATTCACATG+GGG 0.667528 8_2:-4770848 Msa1229140:CDS
TATAGGGATTATCCACCTCG+TGG 0.670506 8_2:-4771433 Msa1229140:CDS
CCAGTATCGGCGTATCTTGG+GGG 0.678120 8_2:+4771088 None:intergenic
CGATTGGAGTATGACTATGG+TGG 0.680575 8_2:-4771046 Msa1229140:CDS
TATGAACCTGAGGAGTATGG+TGG 0.681041 8_2:-4773684 Msa1229140:CDS
GAGTAGTCAGATCCACGAGG+TGG 0.682031 8_2:+4771421 None:intergenic
TCTTCTGAAGAAATATGGCG+AGG 0.682225 8_2:-4772161 Msa1229140:CDS
GTGACATAATTTCATCACCC+GGG 0.686563 8_2:+4772690 None:intergenic
TGAAGAAGGTGATTCAGGCG+AGG 0.686633 8_2:-4773574 Msa1229140:CDS
ATGTACTCATCAAGTTATGG+CGG 0.691988 8_2:-4770676 Msa1229140:CDS
CATGGGATGAAGATTATGTG+CGG 0.692942 8_2:-4772186 Msa1229140:CDS
GGTAGTGGTTCAAAGAGGGG+TGG 0.693327 8_2:-4774813 Msa1229140:CDS
TTTATGATACCATTTGTGGG+TGG 0.694018 8_2:-4769999 Msa1229140:three_prime_UTR
TGTGACATAATTTCATCACC+CGG 0.700332 8_2:+4772689 None:intergenic
AGGCATCCATTGCATCTGAG+CGG 0.701954 8_2:+4772792 None:intergenic
GATAGAGAATCATAATCACG+AGG 0.709014 8_2:+4771271 None:intergenic
GCTTGATTTAGAAAAGCTCG+GGG 0.709373 8_2:-4769316 Msa1229140:three_prime_UTR
TAACTGGTATAGACATGACA+GGG 0.713524 8_2:+4771713 None:intergenic
AGGGGTGGCAGATTATCGAG+AGG 0.718242 8_2:-4774798 Msa1229140:CDS
GCAAAGCAAACAGAACAGTG+TGG 0.727441 8_2:+4768843 None:intergenic
ATAGAGAATCATAATCACGA+GGG 0.739313 8_2:+4771272 None:intergenic
TGAACCTGAGGAGTATGGTG+GGG 0.741917 8_2:-4773682 Msa1229140:CDS
TTATCAAGGCCACTTCAGAG+AGG 0.757296 8_2:-4771907 Msa1229140:CDS
TCAGAGTAGTCAGATCCACG+AGG 0.788482 8_2:+4771418 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAAAAATCTTACTTT+TGG + chr8_2:4768997-4769016 None:intergenic 10.0%
!!! AAAGTTAACTTTTTAAATTA+TGG - chr8_2:4769037-4769056 Msa1229140:three_prime_UTR 10.0%
!!! ATTGATTTTTTTTATATTTG+GGG - chr8_2:4769130-4769149 Msa1229140:three_prime_UTR 10.0%
!!! TTTTTGTATGAATTATTTTT+CGG - chr8_2:4769463-4769482 Msa1229140:three_prime_UTR 10.0%
!!! TTATTATGAATTTACTTTTA+AGG - chr8_2:4771207-4771226 Msa1229140:intron 10.0%
!!! TATTATGAATTTACTTTTAA+GGG - chr8_2:4771208-4771227 Msa1229140:intron 10.0%
!! TTAATTAAATTATTAAATGC+AGG + chr8_2:4774652-4774671 None:intergenic 10.0%
!! AATTTAATTAATATATTCAC+TGG - chr8_2:4774661-4774680 Msa1229140:CDS 10.0%
!! ATTTAATTAATATATTCACT+GGG - chr8_2:4774662-4774681 Msa1229140:CDS 10.0%
!!! TTAAATTGTTTATGGATTAT+TGG - chr8_2:4769157-4769176 Msa1229140:three_prime_UTR 15.0%
!!! TAAATTGTTTATGGATTATT+GGG - chr8_2:4769158-4769177 Msa1229140:three_prime_UTR 15.0%
!!! TATGGTAATTGTAATTTTTA+AGG - chr8_2:4769206-4769225 Msa1229140:three_prime_UTR 15.0%
!!! AAAAAAAATTGTTACTTTTG+TGG - chr8_2:4771156-4771175 Msa1229140:intron 15.0%
!!! ACTTTCATTTATTATTTCTT+AGG - chr8_2:4771958-4771977 Msa1229140:intron 15.0%
!! CTATTTATAGCATTATATTT+GGG - chr8_2:4773389-4773408 Msa1229140:CDS 15.0%
!!! ATTTTATTATTACATTCAAG+AGG - chr8_2:4774331-4774350 Msa1229140:intron 15.0%
!!! TTTTATTATTACATTCAAGA+GGG - chr8_2:4774332-4774351 Msa1229140:intron 15.0%
!!! TAAATTTTTGAGAGAGAATT+GGG + chr8_2:4768620-4768639 None:intergenic 20.0%
!! AATTCTCTCTCAAAAATTTA+GGG - chr8_2:4768620-4768639 Msa1229140:three_prime_UTR 20.0%
!!! AAATTGTTTATGGATTATTG+GGG - chr8_2:4769159-4769178 Msa1229140:three_prime_UTR 20.0%
!!! AAATTTTAAGGGTTTGAATA+TGG - chr8_2:4769188-4769207 Msa1229140:three_prime_UTR 20.0%
!!! AGTTTATATTGTTTTGTTGT+AGG - chr8_2:4769249-4769268 Msa1229140:three_prime_UTR 20.0%
!! TATAATTCATCATTAGATGA+AGG - chr8_2:4769323-4769342 Msa1229140:three_prime_UTR 20.0%
!!! AAAGAATTTGAAGTATTTGT+TGG - chr8_2:4770158-4770177 Msa1229140:three_prime_UTR 20.0%
!!! AAGAATTTGAAGTATTTGTT+GGG - chr8_2:4770159-4770178 Msa1229140:three_prime_UTR 20.0%
!!! TTTTTTTGAAGGTTTTTAAG+CGG - chr8_2:4770929-4770948 Msa1229140:intron 20.0%
!! AAAATTTGATCAGTAAAATG+AGG + chr8_2:4771315-4771334 None:intergenic 20.0%
!!! GATCAAATTTTTCAAATTTC+AGG - chr8_2:4771324-4771343 Msa1229140:CDS 20.0%
!! AAAATGTAAGAATGAATTAC+AGG + chr8_2:4772641-4772660 None:intergenic 20.0%
!! GCTATTTATAGCATTATATT+TGG - chr8_2:4773388-4773407 Msa1229140:CDS 20.0%
!!! AAGTCAAAAGATGATTTTTT+TGG - chr8_2:4773853-4773872 Msa1229140:intron 20.0%
!!! AGTCAAAAGATGATTTTTTT+GGG - chr8_2:4773854-4773873 Msa1229140:intron 20.0%
!! AAATAATTACTATGCGAAAT+CGG + chr8_2:4774060-4774079 None:intergenic 20.0%
!! CTATATGAATACACTATTTA+TGG + chr8_2:4774461-4774480 None:intergenic 20.0%
!! TAAAATGAATACTTATGCAT+AGG + chr8_2:4774612-4774631 None:intergenic 20.0%
!!! CTAAATTTTTGAGAGAGAAT+TGG + chr8_2:4768621-4768640 None:intergenic 25.0%
! CAATTCTCTCTCAAAAATTT+AGG - chr8_2:4768619-4768638 Msa1229140:three_prime_UTR 25.0%
!!! TTGGGGTTTTTGAAATTTTA+AGG - chr8_2:4769176-4769195 Msa1229140:three_prime_UTR 25.0%
!!! TGGGGTTTTTGAAATTTTAA+GGG - chr8_2:4769177-4769196 Msa1229140:three_prime_UTR 25.0%
!!! TATTGTTTTGTTGTAGGAAA+AGG - chr8_2:4769255-4769274 Msa1229140:three_prime_UTR 25.0%
!! TGTTATCGCTTCTTTTATTA+TGG - chr8_2:4769377-4769396 Msa1229140:three_prime_UTR 25.0%
! TTATGTGTTTGTGTTATGTT+TGG - chr8_2:4769491-4769510 Msa1229140:three_prime_UTR 25.0%
!!! AATCATGAAGTGGTTTTAAA+TGG - chr8_2:4769521-4769540 Msa1229140:three_prime_UTR 25.0%
!!! ATCATGAAGTGGTTTTAAAT+GGG - chr8_2:4769522-4769541 Msa1229140:three_prime_UTR 25.0%
! AAAATAGTACAGGTTTCAAT+TGG + chr8_2:4769775-4769794 None:intergenic 25.0%
!! AGAATTTGAAGTATTTGTTG+GGG - chr8_2:4770160-4770179 Msa1229140:three_prime_UTR 25.0%
! AAATGTTGAGGATATAACTT+TGG - chr8_2:4770693-4770712 Msa1229140:CDS 25.0%
! GTAGAAGATTCTAATGATAA+AGG - chr8_2:4770715-4770734 Msa1229140:intron 25.0%
!! TTTTCTGAATAGAAATTCCT+TGG - chr8_2:4770905-4770924 Msa1229140:intron 25.0%
! TTTCTGAATAGAAATTCCTT+GGG - chr8_2:4770906-4770925 Msa1229140:intron 25.0%
!! AGTTTGAAATTGTAATCATG+TGG - chr8_2:4771064-4771083 Msa1229140:CDS 25.0%
!! GTTTGAAATTGTAATCATGT+GGG - chr8_2:4771065-4771084 Msa1229140:CDS 25.0%
! TGTAAAAACTGGAAAATTGT+GGG + chr8_2:4771100-4771119 None:intergenic 25.0%
! ATGTAAAAACTGGAAAATTG+TGG + chr8_2:4771101-4771120 None:intergenic 25.0%
! TTTCTCATCCTAAAATATAC+CGG + chr8_2:4771250-4771269 None:intergenic 25.0%
!!! TACATTTTGATTTGTAGAGT+CGG - chr8_2:4772653-4772672 Msa1229140:intron 25.0%
!! TTTATTATGTTTTTCCGATC+AGG - chr8_2:4772839-4772858 Msa1229140:CDS 25.0%
! TCATATTCATCAATGTATTC+TGG - chr8_2:4773035-4773054 Msa1229140:intron 25.0%
!! TATAAGTGGATGTATTTTTC+TGG - chr8_2:4773180-4773199 Msa1229140:intron 25.0%
! ATGTTATGAAGCTTACAATT+TGG - chr8_2:4773350-4773369 Msa1229140:CDS 25.0%
! GTTATTGAATTTGTGATGTA+TGG - chr8_2:4773483-4773502 Msa1229140:CDS 25.0%
! ACAAATGGTATCATAAATCA+AGG + chr8_2:4773564-4773583 None:intergenic 25.0%
! TTGATTTATGATACCATTTG+TGG - chr8_2:4773563-4773582 Msa1229140:CDS 25.0%
! TGATTTATGATACCATTTGT+GGG - chr8_2:4773564-4773583 Msa1229140:CDS 25.0%
! AAAGAGATGTTTAGTTACTT+TGG - chr8_2:4773733-4773752 Msa1229140:CDS 25.0%
! AGTAATAAGAATACTACTTC+AGG - chr8_2:4773822-4773841 Msa1229140:intron 25.0%
!!! ATCATGCTTTTTACTTTCTT+AGG + chr8_2:4773917-4773936 None:intergenic 25.0%
! AATAATTACTATGCGAAATC+GGG + chr8_2:4774059-4774078 None:intergenic 25.0%
! TGAAAATAAAGTAGCAGAAA+AGG - chr8_2:4774181-4774200 Msa1229140:intron 25.0%
! ATTGACAAAGAAATCACAAA+TGG - chr8_2:4774297-4774316 Msa1229140:intron 25.0%
! TGAATACACTATTTATGGTA+GGG + chr8_2:4774456-4774475 None:intergenic 25.0%
! ATGAATACACTATTTATGGT+AGG + chr8_2:4774457-4774476 None:intergenic 25.0%
! TCATATAGTATACATCTTGA+AGG - chr8_2:4774473-4774492 Msa1229140:intron 25.0%
!! ATTCATTTTATTGCATCTTG+TGG - chr8_2:4774622-4774641 Msa1229140:CDS 25.0%
! GTGAACATTTATATCCATAT+AGG + chr8_2:4774796-4774815 None:intergenic 25.0%
!!! TTCTTTCAATTTGCTATCAT+TGG - chr8_2:4774886-4774905 Msa1229140:five_prime_UTR 25.0%
!! ATAGCTTTATCTTCAACAAC+AGG + chr8_2:4768927-4768946 None:intergenic 30.0%
TGAAATTATAGCGAAAAGTG+AGG - chr8_2:4769090-4769109 Msa1229140:three_prime_UTR 30.0%
GGGGTTGTTTAAATTGTTTA+TGG - chr8_2:4769149-4769168 Msa1229140:three_prime_UTR 30.0%
TATGGTTGTTGCAATTGAAT+AGG - chr8_2:4769395-4769414 Msa1229140:three_prime_UTR 30.0%
! ATGTTGTCAAATATTGGTTG+TGG - chr8_2:4769559-4769578 Msa1229140:three_prime_UTR 30.0%
! CATAGCAAAAGAAGGATTTT+AGG - chr8_2:4769634-4769653 Msa1229140:three_prime_UTR 30.0%
ATCCACAACAATGTTATCAA+TGG + chr8_2:4769667-4769686 None:intergenic 30.0%
CATTGTGCAATGATTGAATA+TGG - chr8_2:4769688-4769707 Msa1229140:three_prime_UTR 30.0%
!!! AAAGTTAAGTCTGTTTTGAC+TGG - chr8_2:4769747-4769766 Msa1229140:three_prime_UTR 30.0%
!!! AAGTTAAGTCTGTTTTGACT+GGG - chr8_2:4769748-4769767 Msa1229140:three_prime_UTR 30.0%
CTTCTGTCAAAAAATAGTAC+AGG + chr8_2:4769785-4769804 None:intergenic 30.0%
!!! TTTTTTGACAGAAGATGAAG+AGG - chr8_2:4769791-4769810 Msa1229140:three_prime_UTR 30.0%
! GAATTTGAAGTATTTGTTGG+GGG - chr8_2:4770161-4770180 Msa1229140:three_prime_UTR 30.0%
TGACTTCTCAATAATAGAGT+AGG - chr8_2:4770370-4770389 Msa1229140:intron 30.0%
CAGATTAATGGAAAACAATG+TGG - chr8_2:4770447-4770466 Msa1229140:intron 30.0%
GCTGAATTTATGACTGTTAA+TGG - chr8_2:4770623-4770642 Msa1229140:intron 30.0%
TTATGGAGTTACAAATGTTG+AGG - chr8_2:4770681-4770700 Msa1229140:CDS 30.0%
!!! AATTCCTTGGGTTTTTTTGA+AGG - chr8_2:4770918-4770937 Msa1229140:intron 30.0%
AAAACCTTCAAAAAAACCCA+AGG + chr8_2:4770925-4770944 None:intergenic 30.0%
TAATGCTTTCATCTTCTTTC+AGG - chr8_2:4771619-4771638 Msa1229140:intron 30.0%
ATAGAGAATCATAATCACGA+GGG + chr8_2:4772297-4772316 None:intergenic 30.0%
TGAATTACAGGACAAAAAAC+AGG + chr8_2:4772629-4772648 None:intergenic 30.0%
ATTCATCAATGTATTCTGGT+AGG - chr8_2:4773039-4773058 Msa1229140:intron 30.0%
TTCATCAATGTATTCTGGTA+GGG - chr8_2:4773040-4773059 Msa1229140:intron 30.0%
TGTGCTTTGTGTATTACATT+AGG - chr8_2:4773147-4773166 Msa1229140:intron 30.0%
!! AGATTTTGCTATACTCGAAA+TGG - chr8_2:4773203-4773222 Msa1229140:intron 30.0%
ACAGATCCGACATAATAAAT+TGG - chr8_2:4773294-4773313 Msa1229140:CDS 30.0%
TTGCAGCCAATTTATTATGT+CGG + chr8_2:4773303-4773322 None:intergenic 30.0%
CATAATAAATTGGCTGCAAT+AGG - chr8_2:4773304-4773323 Msa1229140:CDS 30.0%
ATAACATCCATAAGCTTCAA+AGG + chr8_2:4773337-4773356 None:intergenic 30.0%
CTTGTTTGGTTAAGGATTAA+TGG - chr8_2:4773659-4773678 Msa1229140:CDS 30.0%
!!! ATGATTTTTTTGGGATGTGT+TGG - chr8_2:4773863-4773882 Msa1229140:intron 30.0%
TTTCATATTCACTTGAGTGA+TGG + chr8_2:4774166-4774185 None:intergenic 30.0%
TTTCTAAATCAAGCTAGGTA+GGG + chr8_2:4774244-4774263 None:intergenic 30.0%
! TTTTCTAAATCAAGCTAGGT+AGG + chr8_2:4774245-4774264 None:intergenic 30.0%
TAGCTTGATTTAGAAAAGCT+CGG - chr8_2:4774248-4774267 Msa1229140:intron 30.0%
GCAAATGAACCAACATAAAT+CGG - chr8_2:4774272-4774291 Msa1229140:intron 30.0%
TATAGTATACATCTTGAAGG+AGG - chr8_2:4774476-4774495 Msa1229140:intron 30.0%
TTAAGAAGATATTGCTCGTT+AGG - chr8_2:4774508-4774527 Msa1229140:intron 30.0%
CTCAACATTGCTTAGAAATA+GGG + chr8_2:4774565-4774584 None:intergenic 30.0%
ACTCAACATTGCTTAGAAAT+AGG + chr8_2:4774566-4774585 None:intergenic 30.0%
TGTTAGGTAACATACCTATA+TGG - chr8_2:4774779-4774798 Msa1229140:CDS 30.0%
CGTTCATATATGCATATGAA+TGG - chr8_2:4774840-4774859 Msa1229140:CDS 30.0%
TGCGATCCACAAAGAAATTT+AGG - chr8_2:4768675-4768694 Msa1229140:three_prime_UTR 35.0%
GCGATCCACAAAGAAATTTA+GGG - chr8_2:4768676-4768695 Msa1229140:three_prime_UTR 35.0%
CGAAACCCTAAATTTCTTTG+TGG + chr8_2:4768684-4768703 None:intergenic 35.0%
TATGAATCAAATTGCTCCTG+AGG - chr8_2:4768950-4768969 Msa1229140:three_prime_UTR 35.0%
TTAAATTATGGCGAAAAGCG+AGG - chr8_2:4769049-4769068 Msa1229140:three_prime_UTR 35.0%
AGCGATAACAGCTTACAAAA+AGG + chr8_2:4769367-4769386 None:intergenic 35.0%
TGGTGATATCAATCATGAAG+TGG - chr8_2:4769511-4769530 Msa1229140:three_prime_UTR 35.0%
!!! GGTTTTAAATGGGAATCATG+TGG - chr8_2:4769532-4769551 Msa1229140:three_prime_UTR 35.0%
GGATCGATGTTGTCAAATAT+TGG - chr8_2:4769553-4769572 Msa1229140:three_prime_UTR 35.0%
! ATATTGGTTGTGGCAGATTT+CGG - chr8_2:4769569-4769588 Msa1229140:three_prime_UTR 35.0%
CACAACAATGTTATCAATGG+CGG + chr8_2:4769664-4769683 None:intergenic 35.0%
TGATGAGAAGGAAATTGAAC+AGG - chr8_2:4769914-4769933 Msa1229140:three_prime_UTR 35.0%
AAGGAAATTGAACAGGAAGA+GGG - chr8_2:4769921-4769940 Msa1229140:three_prime_UTR 35.0%
GAAGAACCTGAAGAAAATGT+TGG - chr8_2:4769969-4769988 Msa1229140:three_prime_UTR 35.0%
! TCTTCACCAACATTTTCTTC+AGG + chr8_2:4769978-4769997 None:intergenic 35.0%
! GAAGAAAATGTTGGTGAAGA+AGG - chr8_2:4769978-4769997 Msa1229140:three_prime_UTR 35.0%
AGATGGTCATGATGAAATTG+AGG - chr8_2:4770025-4770044 Msa1229140:three_prime_UTR 35.0%
GATGGTCATGATGAAATTGA+GGG - chr8_2:4770026-4770045 Msa1229140:three_prime_UTR 35.0%
TCCTCAGACAAAAAAGAACA+AGG - chr8_2:4770268-4770287 Msa1229140:three_prime_UTR 35.0%
CCTCAGACAAAAAAGAACAA+GGG - chr8_2:4770269-4770288 Msa1229140:three_prime_UTR 35.0%
ATTCTTGCGGTTTGAAAATG+TGG - chr8_2:4770298-4770317 Msa1229140:intron 35.0%
AGAAGTCAAAGATTACCACT+GGG + chr8_2:4770358-4770377 None:intergenic 35.0%
TCGCTGCAATTTCAGATTAA+TGG - chr8_2:4770435-4770454 Msa1229140:intron 35.0%
GCATATGTTTCCCAAATAGA+GGG + chr8_2:4770499-4770518 None:intergenic 35.0%
TGCATATGTTTCCCAAATAG+AGG + chr8_2:4770500-4770519 None:intergenic 35.0%
TGGGAAACATATGCAAAACA+TGG - chr8_2:4770505-4770524 Msa1229140:CDS 35.0%
CATATGCAAAACATGGACAA+AGG - chr8_2:4770512-4770531 Msa1229140:CDS 35.0%
! AGCTGTAAGTCTAGTTGTTT+TGG - chr8_2:4770536-4770555 Msa1229140:CDS 35.0%
! TCAATGAAGGTGCAAAAAAC+AGG + chr8_2:4770563-4770582 None:intergenic 35.0%
TTGCACCTTCATTGAATTGT+TGG - chr8_2:4770568-4770587 Msa1229140:intron 35.0%
TGCACCTTCATTGAATTGTT+GGG - chr8_2:4770569-4770588 Msa1229140:intron 35.0%
ACAACCCAACAATTCAATGA+AGG + chr8_2:4770576-4770595 None:intergenic 35.0%
TCATAAATTCAGCAGAGTTC+AGG + chr8_2:4770616-4770635 None:intergenic 35.0%
ATGACTGTTAATGGAACTTC+TGG - chr8_2:4770632-4770651 Msa1229140:intron 35.0%
! AAGGAGAAGTTGAAGCATTA+TGG - chr8_2:4770664-4770683 Msa1229140:CDS 35.0%
AATGATAAAGGAACAAACCG+TGG - chr8_2:4770727-4770746 Msa1229140:intron 35.0%
ATTCCAAGAATGCAAATCCA+CGG + chr8_2:4770747-4770766 None:intergenic 35.0%
! TGCAGATTCTTTTATTGACC+CGG - chr8_2:4770858-4770877 Msa1229140:CDS 35.0%
TGTGACATAATTTCATCACC+CGG + chr8_2:4770880-4770899 None:intergenic 35.0%
CAAAATTAACCAACCACTGA+TGG + chr8_2:4770994-4771013 None:intergenic 35.0%
!! CAGTGGTTGGTTAATTTTGT+TGG - chr8_2:4770995-4771014 Msa1229140:intron 35.0%
CACATCACGAATGTAAAAAC+TGG + chr8_2:4771111-4771130 None:intergenic 35.0%
! CAGTTTTTACATTCGTGATG+TGG - chr8_2:4771109-4771128 Msa1229140:intron 35.0%
! ATGACACACCGGTATATTTT+AGG - chr8_2:4771239-4771258 Msa1229140:intron 35.0%
ATGAGAAACTATCCTTCTAG+TGG - chr8_2:4771262-4771281 Msa1229140:CDS 35.0%
GGAATAAATACATCTACACC+TGG + chr8_2:4771294-4771313 None:intergenic 35.0%
ACATAATCTTCATCCCATGA+AGG + chr8_2:4771379-4771398 None:intergenic 35.0%
! CGGAATCTTCTGAAGAAATA+TGG - chr8_2:4771400-4771419 Msa1229140:CDS 35.0%
TTGAAAAGATTGAGCTTGCA+AGG - chr8_2:4771428-4771447 Msa1229140:CDS 35.0%
!! GACTATGGATTTGTTACCTT+TGG - chr8_2:4771475-4771494 Msa1229140:CDS 35.0%
AGCATTACTGGTACAGAATT+GGG - chr8_2:4771529-4771548 Msa1229140:CDS 35.0%
TAACTGGTATAGACATGACA+GGG + chr8_2:4771856-4771875 None:intergenic 35.0%
TGTCTATACCAGTTAGAAGT+AGG - chr8_2:4771861-4771880 Msa1229140:CDS 35.0%
CTTCTATCATAAGATCTAGC+TGG + chr8_2:4771899-4771918 None:intergenic 35.0%
GTGGATAATCCCTATAAGTT+GGG + chr8_2:4772129-4772148 None:intergenic 35.0%
GATAGAGAATCATAATCACG+AGG + chr8_2:4772298-4772317 None:intergenic 35.0%
CGTGATTATGATTCTCTATC+TGG - chr8_2:4772298-4772317 Msa1229140:intron 35.0%
TGCAGAAATAGTACTAACCA+CGG + chr8_2:4772344-4772363 None:intergenic 35.0%
AATGAGATCGTAAACAATGC+AGG + chr8_2:4772385-4772404 None:intergenic 35.0%
!!! TTTGTTTTTTATGCCCAACC+AGG - chr8_2:4772447-4772466 Msa1229140:intron 35.0%
CAGGACAAAAAACAGGATTA+GGG + chr8_2:4772622-4772641 None:intergenic 35.0%
ACAGGACAAAAAACAGGATT+AGG + chr8_2:4772623-4772642 None:intergenic 35.0%
CTTGACCAGAAATAGAACTT+CGG + chr8_2:4772709-4772728 None:intergenic 35.0%
!! ATTTCTGGTCAAGATTCACA+TGG - chr8_2:4772716-4772735 Msa1229140:CDS 35.0%
! TTTCTGGTCAAGATTCACAT+GGG - chr8_2:4772717-4772736 Msa1229140:CDS 35.0%
ATGTACTCATCAAGTTATGG+CGG - chr8_2:4772890-4772909 Msa1229140:CDS 35.0%
ATCTATTGTTCCTGTGATGT+AGG - chr8_2:4773001-4773020 Msa1229140:intron 35.0%
TCATCAATGTATTCTGGTAG+GGG - chr8_2:4773041-4773060 Msa1229140:intron 35.0%
TAGGATGCATTCAGTATAAG+TGG - chr8_2:4773166-4773185 Msa1229140:intron 35.0%
! CATCTCTTATCTTTTCGCAA+GGG - chr8_2:4773226-4773245 Msa1229140:intron 35.0%
CTGTTCATAGACAAATTCAC+TGG + chr8_2:4773278-4773297 None:intergenic 35.0%
CTTGTCAATTCAAGCTATCT+CGG - chr8_2:4773433-4773452 Msa1229140:CDS 35.0%
TTGTCAATTCAAGCTATCTC+GGG - chr8_2:4773434-4773453 Msa1229140:CDS 35.0%
TTTATGATACCATTTGTGGG+TGG - chr8_2:4773567-4773586 Msa1229140:CDS 35.0%
TAACATTATCCACCCACAAA+TGG + chr8_2:4773579-4773598 None:intergenic 35.0%
TGCTCCAATACCATTTCATT+TGG - chr8_2:4773611-4773630 Msa1229140:CDS 35.0%
CTGTCCAAATGAAATGGTAT+TGG + chr8_2:4773618-4773637 None:intergenic 35.0%
! AGATGCTACTTGTTTGGTTA+AGG - chr8_2:4773651-4773670 Msa1229140:CDS 35.0%
TCTGCTGAATGTATCAAAGT+TGG - chr8_2:4773690-4773709 Msa1229140:CDS 35.0%
! GAACTGATAATATTTGCTGC+TGG - chr8_2:4773937-4773956 Msa1229140:intron 35.0%
!! TACTTTGAGTTTTTGTCCTG+AGG - chr8_2:4773970-4773989 Msa1229140:intron 35.0%
AAACTATGCAGGTTACTAGA+TGG + chr8_2:4774036-4774055 None:intergenic 35.0%
! TTTAGCTTCTGCATTGTAGT+GGG - chr8_2:4774135-4774154 Msa1229140:intron 35.0%
! GAGCTTTTCTAAATCAAGCT+AGG + chr8_2:4774249-4774268 None:intergenic 35.0%
AGCTTGATTTAGAAAAGCTC+GGG - chr8_2:4774249-4774268 Msa1229140:intron 35.0%
! TGTCAATGACCGATTTATGT+TGG + chr8_2:4774284-4774303 None:intergenic 35.0%
ATTAATATATTCACTGGGCG+TGG - chr8_2:4774667-4774686 Msa1229140:CDS 35.0%
TTAATATATTCACTGGGCGT+GGG - chr8_2:4774668-4774687 Msa1229140:CDS 35.0%
!! ACTCTAGTTTAGCTCTTGTT+AGG - chr8_2:4774814-4774833 Msa1229140:CDS 35.0%
TGAACCTGTTGAAGAGAAGA+CGG - chr8_2:4768830-4768849 Msa1229140:three_prime_UTR 40.0%
GGTGATTGAAGAAGAGATCA+AGG - chr8_2:4768851-4768870 Msa1229140:three_prime_UTR 40.0%
AGAAGAGAATCTCGTTGTTG+AGG - chr8_2:4768875-4768894 Msa1229140:three_prime_UTR 40.0%
! CGCCATTGATAACATTGTTG+TGG - chr8_2:4769662-4769681 Msa1229140:three_prime_UTR 40.0%
TTTGACAGAAGATGAAGAGG+AGG - chr8_2:4769794-4769813 Msa1229140:three_prime_UTR 40.0%
AGAAGATGAAGAGGAGGTTA+AGG - chr8_2:4769800-4769819 Msa1229140:three_prime_UTR 40.0%
GAAGGAAATTGAACAGGAAG+AGG - chr8_2:4769920-4769939 Msa1229140:three_prime_UTR 40.0%
TGATGAAATTGAGGGAGAAG+AGG - chr8_2:4770034-4770053 Msa1229140:three_prime_UTR 40.0%
ATGCTACTGAAGATGATCTG+AGG - chr8_2:4770195-4770214 Msa1229140:three_prime_UTR 40.0%
TACTGAAGATGATCTGAGGA+AGG - chr8_2:4770199-4770218 Msa1229140:three_prime_UTR 40.0%
! GATGATCTGAGGAAGGTTTT+CGG - chr8_2:4770206-4770225 Msa1229140:three_prime_UTR 40.0%
!!! CCCTTGTTCTTTTTTGTCTG+AGG + chr8_2:4770272-4770291 None:intergenic 40.0%
ACAAGGGATTTGCATTCTTG+CGG - chr8_2:4770285-4770304 Msa1229140:intron 40.0%
GAGAAGTCAAAGATTACCAC+TGG + chr8_2:4770359-4770378 None:intergenic 40.0%
GACAGTGATACCCTCTATTT+GGG - chr8_2:4770486-4770505 Msa1229140:CDS 40.0%
GCTTCAACTTCTCCTTTAAC+TGG + chr8_2:4770660-4770679 None:intergenic 40.0%
AAACCGTGGATTTGCATTCT+TGG - chr8_2:4770741-4770760 Msa1229140:intron 40.0%
! CTTTAAGAGACTGCAGAAGA+GGG - chr8_2:4770795-4770814 Msa1229140:intron 40.0%
TCTGCAAATGAAACCTTTGC+AGG + chr8_2:4770844-4770863 None:intergenic 40.0%
! GCAGATTCTTTTATTGACCC+GGG - chr8_2:4770859-4770878 Msa1229140:CDS 40.0%
GTGACATAATTTCATCACCC+GGG + chr8_2:4770879-4770898 None:intergenic 40.0%
GGGTGATGAAATTATGTCAC+AGG - chr8_2:4770879-4770898 Msa1229140:CDS 40.0%
TAAGCGGAACATGTGTAGAA+TGG - chr8_2:4770945-4770964 Msa1229140:intron 40.0%
ATGAGTTCCAATACCATCAG+TGG - chr8_2:4770978-4770997 Msa1229140:intron 40.0%
TAACCAACCACTGATGGTAT+TGG + chr8_2:4770988-4771007 None:intergenic 40.0%
GAAACTATCCTTCTAGTGGT+TGG - chr8_2:4771266-4771285 Msa1229140:CDS 40.0%
TAATCTTCATCCCATGAAGG+AGG + chr8_2:4771376-4771395 None:intergenic 40.0%
CATGGGATGAAGATTATGTG+CGG - chr8_2:4771380-4771399 Msa1229140:CDS 40.0%
! TCTTCTGAAGAAATATGGCG+AGG - chr8_2:4771405-4771424 Msa1229140:CDS 40.0%
CAGCATTACTGGTACAGAAT+TGG - chr8_2:4771528-4771547 Msa1229140:CDS 40.0%
ATTGGGTGAAGGTGACAAAA+AGG - chr8_2:4771546-4771565 Msa1229140:CDS 40.0%
AATATCTGCGCAGTGAAACA+TGG - chr8_2:4771589-4771608 Msa1229140:intron 40.0%
CAATAATGTCAAGGCCTTCT+TGG - chr8_2:4771732-4771751 Msa1229140:CDS 40.0%
CTAACTGGTATAGACATGAC+AGG + chr8_2:4771857-4771876 None:intergenic 40.0%
CTATCATAAGATCTAGCTGG+AGG + chr8_2:4771896-4771915 None:intergenic 40.0%
TCTTATGATAGAAGACCAGC+TGG - chr8_2:4771905-4771924 Msa1229140:CDS 40.0%
ATTGTACACTACATACCAGC+TGG + chr8_2:4771923-4771942 None:intergenic 40.0%
GCAGCATCTAGAAGACAATA+TGG + chr8_2:4771998-4772017 None:intergenic 40.0%
AGCAGTGTGAAGAGAGATTA+TGG - chr8_2:4772028-4772047 Msa1229140:CDS 40.0%
GTGTGAAGAGAGATTATGGT+CGG - chr8_2:4772032-4772051 Msa1229140:CDS 40.0%
AGTAGAGTTGCTGCAGATTA+TGG - chr8_2:4772079-4772098 Msa1229140:CDS 40.0%
TTGCTGCAGATTATGGATCA+AGG - chr8_2:4772086-4772105 Msa1229140:CDS 40.0%
TGAAAGACGCCCAACTTATA+GGG - chr8_2:4772117-4772136 Msa1229140:CDS 40.0%
GGTGGATAATCCCTATAAGT+TGG + chr8_2:4772130-4772149 None:intergenic 40.0%
TCCTTCACGATAACTTGGAT+GGG + chr8_2:4772272-4772291 None:intergenic 40.0%
!! GGAAGATCTAGTCTTGGATA+TGG - chr8_2:4772674-4772693 Msa1229140:intron 40.0%
!! TCTAGTCTTGGATATGGTAG+TGG - chr8_2:4772680-4772699 Msa1229140:intron 40.0%
TTCTGGTCAAGATTCACATG+GGG - chr8_2:4772718-4772737 Msa1229140:CDS 40.0%
! TTTTTCCGATCAGGCTCTTA+TGG - chr8_2:4772848-4772867 Msa1229140:CDS 40.0%
TCTTATGGCGGTAATGATGT+TGG - chr8_2:4772863-4772882 Msa1229140:CDS 40.0%
GGCATGTACTCATCAAGTTA+TGG - chr8_2:4772887-4772906 Msa1229140:CDS 40.0%
ATTGTTCCTGTGATGTAGGT+TGG - chr8_2:4773005-4773024 Msa1229140:intron 40.0%
GGTTCGGGATCTTATTATTG+AGG - chr8_2:4773098-4773117 Msa1229140:CDS 40.0%
! GCATCTCTTATCTTTTCGCA+AGG - chr8_2:4773225-4773244 Msa1229140:intron 40.0%
AATTGGCTGCAATAGGATGA+CGG - chr8_2:4773311-4773330 Msa1229140:CDS 40.0%
GGGAACTTGTCGCAAAAATT+AGG - chr8_2:4773409-4773428 Msa1229140:CDS 40.0%
TGGTCTCTGTCCAAATGAAA+TGG + chr8_2:4773624-4773643 None:intergenic 40.0%
TTTCATTTGGACAGAGACCA+AGG - chr8_2:4773624-4773643 Msa1229140:CDS 40.0%
GTGTTGTAGGATTTGTGACA+TGG - chr8_2:4773885-4773904 Msa1229140:intron 40.0%
!! TTTGAGTTTTTGTCCTGAGG+TGG - chr8_2:4773973-4773992 Msa1229140:intron 40.0%
TGCAGAAGCTAAAGATTCTG+TGG + chr8_2:4774128-4774147 None:intergenic 40.0%
! CTTTAGCTTCTGCATTGTAG+TGG - chr8_2:4774134-4774153 Msa1229140:intron 40.0%
TAAATCAAGCTAGGTAGGGT+GGG + chr8_2:4774240-4774259 None:intergenic 40.0%
GCTTGATTTAGAAAAGCTCG+GGG - chr8_2:4774250-4774269 Msa1229140:intron 40.0%
CTCAAGACAACCAACAATGT+GGG + chr8_2:4774375-4774394 None:intergenic 40.0%
ACTCAAGACAACCAACAATG+TGG + chr8_2:4774376-4774395 None:intergenic 40.0%
AGACAACCAACGATATGGTT+CGG + chr8_2:4774420-4774439 None:intergenic 40.0%
ACTCAAGACAACCAACGATA+TGG + chr8_2:4774425-4774444 None:intergenic 40.0%
AGTATACATCTTGAAGGAGG+AGG - chr8_2:4774479-4774498 Msa1229140:intron 40.0%
!! GTCTTCGGAGGCATTGTTAT+TGG + chr8_2:4768714-4768733 None:intergenic 45.0%
ATCACCGTCTTCTCTTCAAC+AGG + chr8_2:4768837-4768856 None:intergenic 45.0%
CGTTGTTGAGGAAAAACCTG+TGG - chr8_2:4768887-4768906 Msa1229140:three_prime_UTR 45.0%
TGTTGAGGAAAAACCTGTGG+TGG - chr8_2:4768890-4768909 Msa1229140:three_prime_UTR 45.0%
GGATTATCTTCTTCCACCAC+AGG + chr8_2:4768906-4768925 None:intergenic 45.0%
TTAGCATCTTCTACAGCCTC+AGG + chr8_2:4768969-4768988 None:intergenic 45.0%
AGTTTCTTTGACAACCGCCA+TGG - chr8_2:4769596-4769615 Msa1229140:three_prime_UTR 45.0%
!!! CAACCGCCATGGTGTTTTTT+TGG - chr8_2:4769607-4769626 Msa1229140:three_prime_UTR 45.0%
TGTCCGCCAAAAAAACACCA+TGG + chr8_2:4769616-4769635 None:intergenic 45.0%
! TTGGCGGACATAGCAAAAGA+AGG - chr8_2:4769626-4769645 Msa1229140:three_prime_UTR 45.0%
TGATCCTGAGTATGAACCTG+AGG - chr8_2:4769872-4769891 Msa1229140:three_prime_UTR 45.0%
TACTCCTCAGGTTCATACTC+AGG + chr8_2:4769879-4769898 None:intergenic 45.0%
GAGTATGAACCTGAGGAGTA+TGG - chr8_2:4769879-4769898 Msa1229140:three_prime_UTR 45.0%
! TATGAACCTGAGGAGTATGG+TGG - chr8_2:4769882-4769901 Msa1229140:three_prime_UTR 45.0%
! ATGAACCTGAGGAGTATGGT+GGG - chr8_2:4769883-4769902 Msa1229140:three_prime_UTR 45.0%
TGGGGTTGACTATGATGAGA+AGG - chr8_2:4769902-4769921 Msa1229140:three_prime_UTR 45.0%
! GTTGGTGAAGAAGGTGATTC+AGG - chr8_2:4769987-4770006 Msa1229140:three_prime_UTR 45.0%
GGAACATCGTGAAGTTGTGA+AGG - chr8_2:4770121-4770140 Msa1229140:three_prime_UTR 45.0%
ATCGTGAAGTTGTGAAGGAG+AGG - chr8_2:4770126-4770145 Msa1229140:three_prime_UTR 45.0%
TTGTGAAGGAGAGGCGAAAA+CGG - chr8_2:4770135-4770154 Msa1229140:three_prime_UTR 45.0%
CTTCAGTAGCATCCTTGTCT+AGG + chr8_2:4770187-4770206 None:intergenic 45.0%
! AGGAAGGTTTTCGGTGAAGT+TGG - chr8_2:4770215-4770234 Msa1229140:three_prime_UTR 45.0%
! GGAAGGTTTTCGGTGAAGTT+GGG - chr8_2:4770216-4770235 Msa1229140:three_prime_UTR 45.0%
! GAAGGTTTTCGGTGAAGTTG+GGG - chr8_2:4770217-4770236 Msa1229140:three_prime_UTR 45.0%
AGCAGAGCTTAAAAACCCAG+TGG - chr8_2:4770340-4770359 Msa1229140:intron 45.0%
GGACAGTGATACCCTCTATT+TGG - chr8_2:4770485-4770504 Msa1229140:CDS 45.0%
! GAACTTCTGGTGCCAGTTAA+AGG - chr8_2:4770645-4770664 Msa1229140:intron 45.0%
CCTCTTCTGCAGTCTCTTAA+AGG + chr8_2:4770797-4770816 None:intergenic 45.0%
! CCTTTAAGAGACTGCAGAAG+AGG - chr8_2:4770794-4770813 Msa1229140:intron 45.0%
CAGAAGAGGGATGTTACGTT+TGG - chr8_2:4770808-4770827 Msa1229140:intron 45.0%
!! TGGAGTTGATAAGCCTGCAA+AGG - chr8_2:4770828-4770847 Msa1229140:CDS 45.0%
GTTCCAATACCATCAGTGGT+TGG - chr8_2:4770982-4771001 Msa1229140:intron 45.0%
TTGATGCACTTCCTCCTTCA+TGG - chr8_2:4771362-4771381 Msa1229140:CDS 45.0%
TGATGCACTTCCTCCTTCAT+GGG - chr8_2:4771363-4771382 Msa1229140:CDS 45.0%
! AGATGTGCTGACAGCATTAC+TGG - chr8_2:4771517-4771536 Msa1229140:CDS 45.0%
ACTGGTACAGAATTGGGTGA+AGG - chr8_2:4771535-4771554 Msa1229140:CDS 45.0%
TCTTCTTTCAGGCCAAAGTG+AGG - chr8_2:4771630-4771649 Msa1229140:intron 45.0%
CTTCTTTCAGGCCAAAGTGA+GGG - chr8_2:4771631-4771650 Msa1229140:intron 45.0%
TGATAACCTAGCCCTCACTT+TGG + chr8_2:4771645-4771664 None:intergenic 45.0%
AAGTGAGGGCTAGGTTATCA+AGG - chr8_2:4771645-4771664 Msa1229140:intron 45.0%
TTATCAAGGCCACTTCAGAG+AGG - chr8_2:4771659-4771678 Msa1229140:intron 45.0%
! CACGACCAACATGTTTTCCT+CGG + chr8_2:4771685-4771704 None:intergenic 45.0%
GAGGAAAACATGTTGGTCGT+GGG - chr8_2:4771684-4771703 Msa1229140:CDS 45.0%
AGGAAAACATGTTGGTCGTG+GGG - chr8_2:4771685-4771704 Msa1229140:CDS 45.0%
ATTATTGCAGATCCGCGACT+CGG + chr8_2:4771719-4771738 None:intergenic 45.0%
GCGGATCTGCAATAATGTCA+AGG - chr8_2:4771723-4771742 Msa1229140:CDS 45.0%
!! CTAGCACTGATAGACCTGAT+TGG + chr8_2:4771824-4771843 None:intergenic 45.0%
TCATAAGATCTAGCTGGAGG+AGG + chr8_2:4771893-4771912 None:intergenic 45.0%
TCTGCAGCAACTCTACTTCT+TGG + chr8_2:4772076-4772095 None:intergenic 45.0%
! ATAAGTTGGGCGTCTTTCAG+AGG + chr8_2:4772116-4772135 None:intergenic 45.0%
CTGAAAGACGCCCAACTTAT+AGG - chr8_2:4772116-4772135 Msa1229140:CDS 45.0%
TATAGGGATTATCCACCTCG+TGG - chr8_2:4772133-4772152 Msa1229140:CDS 45.0%
! TGGATGATGGTTACAGCCAA+AGG - chr8_2:4772215-4772234 Msa1229140:CDS 45.0%
! GTTACAGCCAAAGGTATGAG+AGG - chr8_2:4772224-4772243 Msa1229140:intron 45.0%
ACGATAACTTGGATGGGAAG+GGG + chr8_2:4772266-4772285 None:intergenic 45.0%
CACGATAACTTGGATGGGAA+GGG + chr8_2:4772267-4772286 None:intergenic 45.0%
TCACGATAACTTGGATGGGA+AGG + chr8_2:4772268-4772287 None:intergenic 45.0%
TCCCATCCAAGTTATCGTGA+AGG - chr8_2:4772268-4772287 Msa1229140:intron 45.0%
GTCCTTCACGATAACTTGGA+TGG + chr8_2:4772273-4772292 None:intergenic 45.0%
ACTCCAATCGAGCTCTTGAT+TGG + chr8_2:4772510-4772529 None:intergenic 45.0%
GCTCGATTGGAGTATGACTA+TGG - chr8_2:4772517-4772536 Msa1229140:intron 45.0%
CGATTGGAGTATGACTATGG+TGG - chr8_2:4772520-4772539 Msa1229140:intron 45.0%
TCACAGTACGGTGATGCTTA+TGG - chr8_2:4772550-4772569 Msa1229140:intron 45.0%
ACGGTGATGCTTATGGTGAT+AGG - chr8_2:4772557-4772576 Msa1229140:intron 45.0%
AGAGTCGGAAGATCTAGTCT+TGG - chr8_2:4772668-4772687 Msa1229140:intron 45.0%
TATGGCGGTAATGATGTTGG+AGG - chr8_2:4772866-4772885 Msa1229140:CDS 45.0%
! GAGATTGGTTGAGAAAGGAC+AGG + chr8_2:4772949-4772968 None:intergenic 45.0%
TCCTTTCTCAACCAATCTCG+AGG - chr8_2:4772950-4772969 Msa1229140:intron 45.0%
! TCCTCGAGATTGGTTGAGAA+AGG + chr8_2:4772954-4772973 None:intergenic 45.0%
AATGTATTCTGGTAGGGGCA+CGG - chr8_2:4773046-4773065 Msa1229140:intron 45.0%
ATGACGAAGGTTGCACATTG+TGG - chr8_2:4773249-4773268 Msa1229140:CDS 45.0%
!! ATGACGGCCTTTGAAGCTTA+TGG - chr8_2:4773327-4773346 Msa1229140:CDS 45.0%
ACAAGTAGCATCTCTAGCCT+TGG + chr8_2:4773644-4773663 None:intergenic 45.0%
! GGCTAGAGATGCTACTTGTT+TGG - chr8_2:4773645-4773664 Msa1229140:CDS 45.0%
! GTTTTTACAGTGCTGCAGTC+AGG - chr8_2:4773763-4773782 Msa1229140:CDS 45.0%
!! TTGGGATGTGTTGGTGTTGT+AGG - chr8_2:4773872-4773891 Msa1229140:intron 45.0%
ATTATCTTGCAGTCCACCTC+AGG + chr8_2:4773989-4774008 None:intergenic 45.0%
TGAATGTACTTCATGCACCC+TGG - chr8_2:4774206-4774225 Msa1229140:intron 45.0%
AAATCAAGCTAGGTAGGGTG+GGG + chr8_2:4774239-4774258 None:intergenic 45.0%
CTAAATCAAGCTAGGTAGGG+TGG + chr8_2:4774241-4774260 None:intergenic 45.0%
AGACAACCAACAATGTGGGT+CGG + chr8_2:4774371-4774390 None:intergenic 45.0%
! TATGGTTCGGGAGTTGGAAA+GGG + chr8_2:4774407-4774426 None:intergenic 45.0%
! ATATGGTTCGGGAGTTGGAA+AGG + chr8_2:4774408-4774427 None:intergenic 45.0%
GACAACCAACGATATGGTTC+GGG + chr8_2:4774419-4774438 None:intergenic 45.0%
! TGGGTTATTACGGACTGACT+TGG - chr8_2:4774687-4774706 Msa1229140:CDS 45.0%
GCAAAGCAAACAGAACAGTG+TGG + chr8_2:4774726-4774745 None:intergenic 45.0%
! TGTTTGCTTTGCTGTACTGC+AGG - chr8_2:4774734-4774753 Msa1229140:CDS 45.0%
! GTTTGCTTTGCTGTACTGCA+GGG - chr8_2:4774735-4774754 Msa1229140:CDS 45.0%
GCTCTCATCAAGCTCTTGTT+AGG - chr8_2:4774763-4774782 Msa1229140:CDS 45.0%
!!! TTATTGATTTTTTTTATATT+TGG - chr8_2:4769128-4769147 Msa1229140:three_prime_UTR 5.0%
!!! TATTGATTTTTTTTATATTT+GGG - chr8_2:4769129-4769148 Msa1229140:three_prime_UTR 5.0%
GAACCTCTCTTTGGCGTCTT+CGG + chr8_2:4768729-4768748 None:intergenic 50.0%
! AGCGGGTAGTGGTTCAAAGA+GGG - chr8_2:4768749-4768768 Msa1229140:three_prime_UTR 50.0%
TTGGTTGTGGCAGATTTCGG+TGG - chr8_2:4769572-4769591 Msa1229140:three_prime_UTR 50.0%
CCGCCAAAAAAACACCATGG+CGG + chr8_2:4769613-4769632 None:intergenic 50.0%
!!! CCGCCATGGTGTTTTTTTGG+CGG - chr8_2:4769610-4769629 Msa1229140:three_prime_UTR 50.0%
GAGAGACGAGCGTCTAGATT+TGG - chr8_2:4769842-4769861 Msa1229140:three_prime_UTR 50.0%
AGACGAGCGTCTAGATTTGG+AGG - chr8_2:4769845-4769864 Msa1229140:three_prime_UTR 50.0%
! TGAACCTGAGGAGTATGGTG+GGG - chr8_2:4769884-4769903 Msa1229140:three_prime_UTR 50.0%
TGAACAGGAAGAGGGACATG+AGG - chr8_2:4769929-4769948 Msa1229140:three_prime_UTR 50.0%
TGAGGTGGGAGATGAAGTTG+AGG - chr8_2:4769947-4769966 Msa1229140:three_prime_UTR 50.0%
TGAAGAAGGTGATTCAGGCG+AGG - chr8_2:4769992-4770011 Msa1229140:three_prime_UTR 50.0%
GATGGCTGATGTGGATGAAG+AGG - chr8_2:4770100-4770119 Msa1229140:three_prime_UTR 50.0%
! ATTTGTTGGGGGCCTAGACA+AGG - chr8_2:4770172-4770191 Msa1229140:three_prime_UTR 50.0%
TGAAGTTGGGGTTGTGACTG+AGG - chr8_2:4770229-4770248 Msa1229140:three_prime_UTR 50.0%
!! ATGTGGTGTTACTCCGAGTC+AGG - chr8_2:4770464-4770483 Msa1229140:intron 50.0%
! AGGGTATCACTGTCCTGACT+CGG + chr8_2:4770480-4770499 None:intergenic 50.0%
AGGCATCCATTGCATCTGAG+CGG + chr8_2:4770777-4770796 None:intergenic 50.0%
! TCCTTCTAGTGGTTGGTTCC+AGG - chr8_2:4771273-4771292 Msa1229140:CDS 50.0%
ACCTGGAACCAACCACTAGA+AGG + chr8_2:4771277-4771296 None:intergenic 50.0%
TAGTCCTTTCTACGAGCAGC+TGG + chr8_2:4771460-4771479 None:intergenic 50.0%
GCTGCTCGTAGAAAGGACTA+TGG - chr8_2:4771460-4771479 Msa1229140:CDS 50.0%
AGAGGCCGAGGAAAACATGT+TGG - chr8_2:4771677-4771696 Msa1229140:CDS 50.0%
CGAGGAAAACATGTTGGTCG+TGG - chr8_2:4771683-4771702 Msa1229140:CDS 50.0%
TTATTGCAGATCCGCGACTC+GGG + chr8_2:4771718-4771737 None:intergenic 50.0%
! GCACTGATAGACCTGATTGG+CGG + chr8_2:4771821-4771840 None:intergenic 50.0%
! GGTAGTGGCCTACTTCTAAC+TGG + chr8_2:4771872-4771891 None:intergenic 50.0%
GCAACTCTACTTCTTGGAGG+TGG + chr8_2:4772070-4772089 None:intergenic 50.0%
GCAGCAACTCTACTTCTTGG+AGG + chr8_2:4772073-4772092 None:intergenic 50.0%
TCAGAGTAGTCAGATCCACG+AGG + chr8_2:4772151-4772170 None:intergenic 50.0%
CAGCACGAGCAGTACTTCTA+GGG + chr8_2:4772177-4772196 None:intergenic 50.0%
TCATCCACGTAACCTCTCCT+AGG + chr8_2:4772202-4772221 None:intergenic 50.0%
AGGAGAGGTTACGTGGATGA+TGG - chr8_2:4772202-4772221 Msa1229140:CDS 50.0%
CGATAACTTGGATGGGAAGG+GGG + chr8_2:4772265-4772284 None:intergenic 50.0%
ATCTTGGGGGAACATCATCC+TGG + chr8_2:4772468-4772487 None:intergenic 50.0%
!! ACCAGTATCGGCGTATCTTG+GGG + chr8_2:4772482-4772501 None:intergenic 50.0%
!! CACCAGTATCGGCGTATCTT+GGG + chr8_2:4772483-4772502 None:intergenic 50.0%
TGATTGGCGAGCACCAGTAT+CGG + chr8_2:4772494-4772513 None:intergenic 50.0%
TCGCCAATCAAGAGCTCGAT+TGG - chr8_2:4772504-4772523 Msa1229140:intron 50.0%
GGCAGCCGAAGTTCTATTTC+TGG - chr8_2:4772701-4772720 Msa1229140:CDS 50.0%
CACATGGGGTGTATAGCAGT+CGG - chr8_2:4772732-4772751 Msa1229140:CDS 50.0%
TTCCGATCAGGCTCTTATGG+CGG - chr8_2:4772851-4772870 Msa1229140:CDS 50.0%
TACCGCCATAAGAGCCTGAT+CGG + chr8_2:4772856-4772875 None:intergenic 50.0%
CTCAACCAATCTCGAGGAGT+CGG - chr8_2:4772956-4772975 Msa1229140:intron 50.0%
! GTTCCTGTGATGTAGGTTGG+TGG - chr8_2:4773008-4773027 Msa1229140:intron 50.0%
! ATGTATTCTGGTAGGGGCAC+GGG - chr8_2:4773047-4773066 Msa1229140:intron 50.0%
! CTTTTCGCAAGGGATGACGA+AGG - chr8_2:4773236-4773255 Msa1229140:CDS 50.0%
AGCTATCTCGGGTCTTCTCT+AGG - chr8_2:4773445-4773464 Msa1229140:CDS 50.0%
TATCTCGGGTCTTCTCTAGG+TGG - chr8_2:4773448-4773467 Msa1229140:CDS 50.0%
ATCTCGGGTCTTCTCTAGGT+GGG - chr8_2:4773449-4773468 Msa1229140:CDS 50.0%
GGACTCAAGTTAGTGAGCGA+TGG - chr8_2:4773504-4773523 Msa1229140:CDS 50.0%
GCGAAATCGGGAAACTATGC+AGG + chr8_2:4774047-4774066 None:intergenic 50.0%
AATCAAGCTAGGTAGGGTGG+GGG + chr8_2:4774238-4774257 None:intergenic 50.0%
GACAACCAACAATGTGGGTC+GGG + chr8_2:4774370-4774389 None:intergenic 50.0%
! CAACGATATGGTTCGGGAGT+TGG + chr8_2:4774413-4774432 None:intergenic 50.0%
CAACTCCCGAACCATATCGT+TGG - chr8_2:4774411-4774430 Msa1229140:intron 50.0%
! TCACTGGGCGTGGGTTATTA+CGG - chr8_2:4774677-4774696 Msa1229140:CDS 50.0%
GACGCCAAAGAGAGGTTCAG+CGG - chr8_2:4768731-4768750 Msa1229140:three_prime_UTR 55.0%
ACGCCAAAGAGAGGTTCAGC+GGG - chr8_2:4768732-4768751 Msa1229140:three_prime_UTR 55.0%
CTACCCGCTGAACCTCTCTT+TGG + chr8_2:4768738-4768757 None:intergenic 55.0%
AAGAGAGGTTCAGCGGGTAG+TGG - chr8_2:4768738-4768757 Msa1229140:three_prime_UTR 55.0%
! CAGCGGGTAGTGGTTCAAAG+AGG - chr8_2:4768748-4768767 Msa1229140:three_prime_UTR 55.0%
! GCGGGTAGTGGTTCAAAGAG+GGG - chr8_2:4768750-4768769 Msa1229140:three_prime_UTR 55.0%
! GGTAGTGGTTCAAAGAGGGG+TGG - chr8_2:4768753-4768772 Msa1229140:three_prime_UTR 55.0%
AGGGGTGGCAGATTATCGAG+AGG - chr8_2:4768768-4768787 Msa1229140:three_prime_UTR 55.0%
TCAACCCCACCATACTCCTC+AGG + chr8_2:4769891-4769910 None:intergenic 55.0%
ACAGGAAGAGGGACATGAGG+TGG - chr8_2:4769932-4769951 Msa1229140:three_prime_UTR 55.0%
CAGGAAGAGGGACATGAGGT+GGG - chr8_2:4769933-4769952 Msa1229140:three_prime_UTR 55.0%
GGCGAGGAAGAAGTCGAAGA+TGG - chr8_2:4770008-4770027 Msa1229140:three_prime_UTR 55.0%
GGATGACGAGCATGCTGATG+AGG - chr8_2:4770055-4770074 Msa1229140:three_prime_UTR 55.0%
TTGGGGTTGTGACTGAGGTC+AGG - chr8_2:4770234-4770253 Msa1229140:three_prime_UTR 55.0%
TTCCTCCCGCTCAGATGCAA+TGG - chr8_2:4770768-4770787 Msa1229140:intron 55.0%
ATCCATTGCATCTGAGCGGG+AGG + chr8_2:4770773-4770792 None:intergenic 55.0%
GGCATCCATTGCATCTGAGC+GGG + chr8_2:4770776-4770795 None:intergenic 55.0%
GGGTGTTCAGCATGACACAC+CGG - chr8_2:4771228-4771247 Msa1229140:intron 55.0%
CATGCCAGCTGCTCGTAGAA+AGG - chr8_2:4771453-4771472 Msa1229140:CDS 55.0%
AGCAGCATCGTGTGAGCCAA+AGG + chr8_2:4771494-4771513 None:intergenic 55.0%
TTCAGGCCAAAGTGAGGGCT+AGG - chr8_2:4771636-4771655 Msa1229140:intron 55.0%
! TTTCCTCGGCCTCTCTGAAG+TGG + chr8_2:4771671-4771690 None:intergenic 55.0%
AGAAACTACGGGGTGCAGGT+CGG + chr8_2:4771763-4771782 None:intergenic 55.0%
TCGCGTGGGGTAAGAGGAAT+TGG - chr8_2:4771785-4771804 Msa1229140:CDS 55.0%
GATCTAGCTGGAGGAGGTAG+TGG + chr8_2:4771887-4771906 None:intergenic 55.0%
GAGTAGTCAGATCCACGAGG+TGG + chr8_2:4772148-4772167 None:intergenic 55.0%
GCAGCACGAGCAGTACTTCT+AGG + chr8_2:4772178-4772197 None:intergenic 55.0%
TGCACCTAGGAGAGGTTACG+TGG - chr8_2:4772195-4772214 Msa1229140:CDS 55.0%
GAGGTGGCCTCTCATACCTT+TGG + chr8_2:4772234-4772253 None:intergenic 55.0%
TAACTTGGATGGGAAGGGGG+TGG + chr8_2:4772262-4772281 None:intergenic 55.0%
GGGCGTCCTTCACGATAACT+TGG + chr8_2:4772277-4772296 None:intergenic 55.0%
AAAACGTTCGTACGCTGCCG+TGG - chr8_2:4772324-4772343 Msa1229140:intron 55.0%
GGGGGAACATCATCCTGGTT+GGG + chr8_2:4772463-4772482 None:intergenic 55.0%
TGGGGGAACATCATCCTGGT+TGG + chr8_2:4772464-4772483 None:intergenic 55.0%
!! CCAGTATCGGCGTATCTTGG+GGG + chr8_2:4772481-4772500 None:intergenic 55.0%
!! GCACCAGTATCGGCGTATCT+TGG + chr8_2:4772484-4772503 None:intergenic 55.0%
GGTGGCAGTGCTTCACAGTA+CGG - chr8_2:4772538-4772557 Msa1229140:intron 55.0%
AGTCGGCAGGGCATGAGTTA+TGG - chr8_2:4772749-4772768 Msa1229140:CDS 55.0%
CAGGGCATGAGTTATGGTGG+AGG - chr8_2:4772755-4772774 Msa1229140:CDS 55.0%
GGCGGTGATTACGTTTCTCG+TGG - chr8_2:4772908-4772927 Msa1229140:CDS 55.0%
ACAGTCCGACTCCTCGAGAT+TGG + chr8_2:4772964-4772983 None:intergenic 55.0%
CTGCCACCAACCTACATCAC+AGG + chr8_2:4773014-4773033 None:intergenic 55.0%
! GGTGGCGGTAGCAGTTACAT+GGG - chr8_2:4773068-4773087 Msa1229140:CDS 55.0%
GGTAGCAGTTACATGGGCAG+CGG - chr8_2:4773074-4773093 Msa1229140:CDS 55.0%
TTACATGGGCAGCGGTGGTT+CGG - chr8_2:4773082-4773101 Msa1229140:CDS 55.0%
TAGGGTGGGGGGTAAAACCA+GGG + chr8_2:4774226-4774245 None:intergenic 55.0%
ATCAAGCTAGGTAGGGTGGG+GGG + chr8_2:4774237-4774256 None:intergenic 55.0%
CAACAATGTGGGTCGGGAGT+TGG + chr8_2:4774364-4774383 None:intergenic 55.0%
CAACTCCCGACCCACATTGT+TGG - chr8_2:4774362-4774381 Msa1229140:intron 55.0%
CCTCTCTTTGGCGTCTTCGG+AGG + chr8_2:4768726-4768745 None:intergenic 60.0%
CCTCCGAAGACGCCAAAGAG+AGG - chr8_2:4768723-4768742 Msa1229140:three_prime_UTR 60.0%
GACGAGAAACTACGGGGTGC+AGG + chr8_2:4771767-4771786 None:intergenic 60.0%
CCACGCGACGAGAAACTACG+GGG + chr8_2:4771773-4771792 None:intergenic 60.0%
CCCACGCGACGAGAAACTAC+GGG + chr8_2:4771774-4771793 None:intergenic 60.0%
CCCGTAGTTTCTCGTCGCGT+GGG - chr8_2:4771771-4771790 Msa1229140:CDS 60.0%
CCCCACGCGACGAGAAACTA+CGG + chr8_2:4771775-4771794 None:intergenic 60.0%
CCGTAGTTTCTCGTCGCGTG+GGG - chr8_2:4771772-4771791 Msa1229140:CDS 60.0%
TTCTCGTCGCGTGGGGTAAG+AGG - chr8_2:4771779-4771798 Msa1229140:CDS 60.0%
GAAGTCGTGCTCCGCCAATC+AGG - chr8_2:4771807-4771826 Msa1229140:CDS 60.0%
GTACTGCTCGTGCTGCACCT+AGG - chr8_2:4772182-4772201 Msa1229140:CDS 60.0%
CCCCCAAGATACGCCGATAC+TGG - chr8_2:4772478-4772497 Msa1229140:intron 60.0%
TGGGGTGTATAGCAGTCGGC+AGG - chr8_2:4772736-4772755 Msa1229140:CDS 60.0%
GGGGTGTATAGCAGTCGGCA+GGG - chr8_2:4772737-4772756 Msa1229140:CDS 60.0%
CGGCAGGGCATGAGTTATGG+TGG - chr8_2:4772752-4772771 Msa1229140:CDS 60.0%
! TATTCTGGTAGGGGCACGGG+TGG - chr8_2:4773050-4773069 Msa1229140:CDS 60.0%
! GGGTGGCGGTAGCAGTTACA+TGG - chr8_2:4773067-4773086 Msa1229140:CDS 60.0%
AGCAGTTACATGGGCAGCGG+TGG - chr8_2:4773077-4773096 Msa1229140:CDS 60.0%
TACATGGGCAGCGGTGGTTC+GGG - chr8_2:4773083-4773102 Msa1229140:CDS 60.0%
GTAGGGTGGGGGGTAAAACC+AGG + chr8_2:4774227-4774246 None:intergenic 60.0%
GGAGCATGACCGTGAGCGTG+CGG - chr8_2:4770076-4770095 Msa1229140:three_prime_UTR 65.0%
TGACCGTGAGCGTGCGGAGA+TGG - chr8_2:4770082-4770101 Msa1229140:three_prime_UTR 65.0%
CAGCCATCTCCGCACGCTCA+CGG + chr8_2:4770088-4770107 None:intergenic 65.0%
GCGTGCGGAGATGGCTGATG+TGG - chr8_2:4770091-4770110 Msa1229140:three_prime_UTR 65.0%
AGGCCACTTCAGAGAGGCCG+AGG - chr8_2:4771665-4771684 Msa1229140:CDS 65.0%
GCAGGTCGGCTGCTCCAAGA+AGG + chr8_2:4771749-4771768 None:intergenic 65.0%
CCCCGTAGTTTCTCGTCGCG+TGG - chr8_2:4771770-4771789 Msa1229140:CDS 65.0%
GCTCGTGCTGCACCTAGGAG+AGG - chr8_2:4772187-4772206 Msa1229140:CDS 65.0%
CTTGGATGGGAAGGGGGTGG+AGG + chr8_2:4772259-4772278 None:intergenic 65.0%
GGGGACTATCGCCCGAGTCG+CGG - chr8_2:4771704-4771723 Msa1229140:CDS 70.0%
GAAGGGGGTGGAGGAGGAGG+TGG + chr8_2:4772250-4772269 None:intergenic 70.0%
TGGGAAGGGGGTGGAGGAGG+AGG + chr8_2:4772253-4772272 None:intergenic 70.0%
GGATGGGAAGGGGGTGGAGG+AGG + chr8_2:4772256-4772275 None:intergenic 70.0%
! TCTGGTAGGGGCACGGGTGG+CGG - chr8_2:4773053-4773072 Msa1229140:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 4768582 4775006 4768582 ID=Msa1229140;Name=Msa1229140
chr8_2 mRNA 4768582 4775006 4768582 ID=Msa1229140-mRNA-1;Parent=Msa1229140;Name=Msa1229140-mRNA-1;_AED=0.07;_eAED=0.07;_QI=138|1|1|1|0.90|0.83|12|1710|800
chr8_2 exon 4768582 4770290 4768582 ID=Msa1229140-mRNA-1:exon:1600;Parent=Msa1229140-mRNA-1
chr8_2 exon 4770469 4770565 4770469 ID=Msa1229140-mRNA-1:exon:1599;Parent=Msa1229140-mRNA-1
chr8_2 exon 4770651 4770727 4770651 ID=Msa1229140-mRNA-1:exon:1598;Parent=Msa1229140-mRNA-1
chr8_2 exon 4770812 4770918 4770812 ID=Msa1229140-mRNA-1:exon:1597;Parent=Msa1229140-mRNA-1
chr8_2 exon 4771010 4771119 4771010 ID=Msa1229140-mRNA-1:exon:1596;Parent=Msa1229140-mRNA-1
chr8_2 exon 4771243 4771577 4771243 ID=Msa1229140-mRNA-1:exon:1595;Parent=Msa1229140-mRNA-1
chr8_2 exon 4771662 4771947 4771662 ID=Msa1229140-mRNA-1:exon:1594;Parent=Msa1229140-mRNA-1
chr8_2 exon 4772021 4772242 4772021 ID=Msa1229140-mRNA-1:exon:1593;Parent=Msa1229140-mRNA-1
chr8_2 exon 4772688 4772927 4772688 ID=Msa1229140-mRNA-1:exon:1592;Parent=Msa1229140-mRNA-1
chr8_2 exon 4773049 4773138 4773049 ID=Msa1229140-mRNA-1:exon:1591;Parent=Msa1229140-mRNA-1
chr8_2 exon 4773227 4773786 4773227 ID=Msa1229140-mRNA-1:exon:1590;Parent=Msa1229140-mRNA-1
chr8_2 exon 4774589 4775006 4774589 ID=Msa1229140-mRNA-1:exon:1589;Parent=Msa1229140-mRNA-1
chr8_2 five_prime_UTR 4774869 4775006 4774869 ID=Msa1229140-mRNA-1:five_prime_utr;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4774589 4774868 4774589 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4773227 4773786 4773227 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4773049 4773138 4773049 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4772688 4772927 4772688 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4772021 4772242 4772021 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4771662 4771947 4771662 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4771243 4771577 4771243 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4771010 4771119 4771010 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4770812 4770918 4770812 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4770651 4770727 4770651 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 CDS 4770470 4770565 4770470 ID=Msa1229140-mRNA-1:cds;Parent=Msa1229140-mRNA-1
chr8_2 three_prime_UTR 4770469 4770469 4770469 ID=Msa1229140-mRNA-1:three_prime_utr;Parent=Msa1229140-mRNA-1
chr8_2 three_prime_UTR 4768582 4770290 4768582 ID=Msa1229140-mRNA-1:three_prime_utr;Parent=Msa1229140-mRNA-1
Gene Sequence

>Msa1229140

ATGCCTCCGAAGACGCCAAAGAGAGGTTCAGCGGGTAGTGGTTCAAAGAGGGGTGGCAGATTATCGAGAGGAACTGCGAAATCTGCACAGAATCAACAACAACAGCAATCTGAACCTGTTGAAGAGAAGACGGTGATTGAAGAAGAGATCAAGGTAGAAGAGAATCTCGTTGTTGAGGAAAAACCTGTGGTGGAAGAAGATAATCCTGTTGTTGAAGATAAAGCTATTGATATGAATCAAATTGCTCCTGAGGCTGTAGAAGATGCTAATCTAGCCAAAAAAGATGAAGAGGAGGTTAAGGAGTCTATAGATGAATATGAGAGAGACGAGCGTCTAGATTTGGAGGATAATGATCCTGAGTATGAACCTGAGGAGTATGGTGGGGTTGACTATGATGAGAAGGAAATTGAACAGGAAGAGGGACATGAGGTGGGAGATGAAGTTGAGGAAGAACCTGAAGAAAATGTTGGTGAAGAAGGTGATTCAGGCGAGGAAGAAGTCGAAGATGGTCATGATGAAATTGAGGGAGAAGAGGATGACGAGCATGCTGATGAGGAGCATGACCGTGAGCGTGCGGAGATGGCTGATGTGGATGAAGAGGAACATCGTGAAGTTGTGAAGGAGAGGCGAAAACGGAAAGAATTTGAAGTATTTGTTGGGGGCCTAGACAAGGATGCTACTGAAGATGATCTGAGGAAGGTTTTCGGTGAAGTTGGGGTTGTGACTGAGGTCAGGCTGATGATGAATCCTCAGACAAAAAAGAACAAGGGATTTGCATTCTTGCGGTTTGAAAATGTGGAACAAGCAAAACGAGCTGTAGCAGAGCTTAAAAACCCAGTGATTAATGGAAAACAATGTGGTGTTACTCCGAGTCAGGACAGTGATACCCTCTATTTGGGAAACATATGCAAAACATGGACAAAGGAAGCTTTAAAGGAGAAGTTGAAGCATTATGGAGTTACAAATGTTGAGGATATAACTTTGGTAGAAGATTCTAATGATAAAGGAACAAACCGTGGATTTGCATTCTTGGAATTTTCCTCCCGCTCAGATGCAATGGATGCCTTTAAGAGACTGCAGAAGAGGGATGTTACGTTTGGAGTTGATAAGCCTGCAAAGGTTTCATTTGCAGATTCTTTTATTGACCCGGGTGATGAAATTATGTCACAGGTTAAAACTGTATTTATTGATGCACTTCCTCCTTCATGGGATGAAGATTATGTGCGGAATCTTCTGAAGAAATATGGCGAGGTTGAAAAGATTGAGCTTGCAAGGAACATGCCAGCTGCTCGTAGAAAGGACTATGGATTTGTTACCTTTGGCTCACACGATGCTGCTATAAGATGTGCTGACAGCATTACTGGTACAGAATTGGGTGAAGGTGACAAAAAGGCCAAAGTGAGGGCTAGGTTATCAAGGCCACTTCAGAGAGGCCGAGGAAAACATGTTGGTCGTGGGGACTATCGCCCGAGTCGCGGATCTGCAATAATGTCAAGGCCTTCTTGGAGCAGCCGACCTGCACCCCGTAGTTTCTCGTCGCGTGGGGTAAGAGGAATTGGAAGTCGTGCTCCGCCAATCAGGTCTATCAGTGCTAGAGATAGACGCCCTGTCATGTCTATACCAGTTAGAAGTAGGCCACTACCTCCTCCAGCTAGATCTTATGATAGAAGACCAGCTGATGCTGCATATTCAAAAAGCAGTGTGAAGAGAGATTATGGTCGGCGTGATGATCTACCACCTCCAAGAAGTAGAGTTGCTGCAGATTATGGATCAAGGATGACCTCTGAAAGACGCCCAACTTATAGGGATTATCCACCTCGTGGATCTGACTACTCTGATCTCCCTAGAAGTACTGCTCGTGCTGCACCTAGGAGAGGTTACGTGGATGATGGTTACAGCCAAAGGTATGAGAGGCCACCTCCTCCTCCACCCCCTTCCCATCCAAGTTATCGTGAAGGACGCCCTCGTGATTATGATTCTCTATCTGGCTCAAAACGTTCGTACGCTGCCGTGGATGATGTTCCCCCAAGATACGCCGATACTGGTGCTCGCCAATCAAGAGCTCGATTGGAGTATGACTATGGTGGCAGTGCTTCACAGTACGGTGATGCTTATGGTGATAGAGTCGGAAGATCTAGTCTTGGATATGGTAGTGGCAGCCGAAGTTCTATTTCTGGTCAAGATTCACATGGGGTGTATAGCAGTCGGCAGGGCATGAGTTATGGTGGAGGCTCTTATGGCGGTAATGATGTTGGAGGCATGTACTCATCAAGTTATGGCGGTGATTACGTTTCTCGTGGAAATGATGTTGGTGGCAGCTCATATTCATCAATGTATTCTGGTAGGGGCACGGGTGGCGGTAGCAGTTACATGGGCAGCGGTGGTTCGGGATCTTATTATTGA
Protein sequence

>Msa1229140

MPPKTPKRGSAGSGSKRGGRLSRGTAKSAQNQQQQQSEPVEEKTVIEEEIKVEENLVVEEKPVVEEDNPVVEDKAIDMNQIAPEAVEDANLAKKDEEEVKESIDEYERDERLDLEDNDPEYEPEEYGGVDYDEKEIEQEEGHEVGDEVEEEPEENVGEEGDSGEEEVEDGHDEIEGEEDDEHADEEHDRERAEMADVDEEEHREVVKERRKRKEFEVFVGGLDKDATEDDLRKVFGEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAELKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDKGTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVFIDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITGTELGEGDKKAKVRARLSRPLQRGRGKHVGRGDYRPSRGSAIMSRPSWSSRPAPRSFSSRGVRGIGSRAPPIRSISARDRRPVMSIPVRSRPLPPPARSYDRRPADAAYSKSSVKRDYGRRDDLPPPRSRVAADYGSRMTSERRPTYRDYPPRGSDYSDLPRSTARAAPRRGYVDDGYSQRYERPPPPPPPSHPSYREGRPRDYDSLSGSKRSYAAVDDVPPRYADTGARQSRARLEYDYGGSASQYGDAYGDRVGRSSLGYGSGSRSSISGQDSHGVYSSRQGMSYGGGSYGGNDVGGMYSSSYGGDYVSRGNDVGGSSYSSMYSGRGTGGGSSYMGSGGSGSYY*