AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1271820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271820 MtrunA17_Chr8g0335981 99.000 800 8 0 1 800 1 800 0.0 1582
Msa1271820 MtrunA17_Chr7g0250221 63.027 806 231 15 1 783 1 762 0.0 851
Msa1271820 MtrunA17_Chr8g0372111 57.241 290 120 2 192 477 392 681 2.83e-106 349
Msa1271820 MtrunA17_Chr7g0276201 29.139 302 201 9 175 474 67 357 4.12e-33 134
Msa1271820 MtrunA17_Chr7g0266451 31.020 245 161 5 216 459 102 339 8.16e-30 124
Msa1271820 MtrunA17_Chr4g0026301 29.893 281 187 6 181 458 77 350 5.27e-29 122
Msa1271820 MtrunA17_Chr1g0153181 24.016 254 170 7 217 458 34 276 2.09e-15 80.5
Msa1271820 MtrunA17_Chr4g0068631 30.508 177 102 6 216 378 89 258 1.17e-14 78.2
Msa1271820 MtrunA17_Chr6g0465751 22.134 253 178 6 217 461 27 268 1.57e-12 71.2
Msa1271820 MtrunA17_Chr2g0288251 23.792 269 171 10 217 459 62 322 3.46e-12 69.3
Msa1271820 MtrunA17_Chr3g0134141 23.504 234 160 7 217 440 26 250 5.02e-12 69.3
Msa1271820 MtrunA17_Chr7g0265341 22.353 255 175 6 217 459 72 315 2.66e-11 67.4
Msa1271820 MtrunA17_Chr0c09g0493511 22.022 277 177 9 210 460 26 289 7.81e-11 65.5
Msa1271820 MtrunA17_Chr4g0044541 27.313 227 131 6 200 402 200 416 8.42e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271820 AT2G44710.2 57.340 797 291 15 1 766 1 779 0.0 710
Msa1271820 AT2G44710.1 57.340 797 291 15 1 766 1 779 0.0 710
Msa1271820 AT2G44710.4 60.993 705 233 11 90 766 4 694 0.0 701
Msa1271820 AT2G44710.3 52.668 431 110 13 390 766 25 415 4.02e-109 341
Msa1271820 AT4G00830.2 30.225 311 189 9 153 450 53 348 2.92e-33 135
Msa1271820 AT4G00830.1 30.225 311 189 9 153 450 53 348 2.92e-33 135
Msa1271820 AT4G00830.6 30.225 311 189 9 153 450 53 348 2.92e-33 135
Msa1271820 AT4G00830.4 29.582 311 191 9 153 450 53 348 1.88e-31 129
Msa1271820 AT4G00830.3 28.939 311 185 9 153 450 53 340 4.05e-29 122
Msa1271820 AT4G00830.5 28.939 311 185 9 153 450 53 340 4.05e-29 122
Msa1271820 AT3G52660.3 28.490 351 212 8 101 448 10 324 1.80e-18 89.7
Msa1271820 AT3G52660.1 28.490 351 212 8 101 448 10 324 1.80e-18 89.7
Msa1271820 AT3G52660.2 28.490 351 212 8 101 448 10 324 1.80e-18 89.7
Msa1271820 AT2G47310.1 31.667 180 102 5 216 378 111 286 8.56e-16 81.6
Msa1271820 AT4G34110.1 23.622 254 171 6 217 458 38 280 5.99e-15 79.3
Msa1271820 AT4G34110.1 28.241 216 123 5 211 402 211 418 8.01e-11 66.2
Msa1271820 AT4G16280.3 27.586 174 111 3 216 378 121 290 1.95e-13 74.3
Msa1271820 AT4G16280.2 27.586 174 111 3 216 378 121 290 2.97e-13 73.9
Msa1271820 AT4G16280.4 27.586 174 111 3 216 378 46 215 4.98e-13 73.2
Msa1271820 AT3G16380.1 25.097 259 165 7 217 459 23 268 7.77e-13 72.4
Msa1271820 AT1G49760.1 22.742 299 188 8 210 473 128 418 1.41e-12 71.6
Msa1271820 AT1G49760.2 22.742 299 188 8 210 473 128 418 1.41e-12 71.6
Msa1271820 AT3G13224.2 31.034 145 83 5 216 348 20 159 2.47e-12 69.7
Msa1271820 AT1G71770.1 23.256 258 172 7 217 460 61 306 9.06e-12 69.3
Msa1271820 AT1G71770.2 23.256 258 172 7 217 460 61 306 9.06e-12 69.3
Msa1271820 AT2G36660.1 23.320 253 173 6 217 459 26 267 1.15e-11 68.9
Msa1271820 AT3G13224.3 31.034 145 83 5 216 348 11 150 1.21e-11 67.4
Msa1271820 AT1G22760.1 21.933 269 176 8 217 459 138 398 1.40e-11 68.6

Find 334 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATTTATAACATTATATT+TGG 0.075669 8_3:-5269645 Msa1271820:three_prime_UTR
TCGCTGCAATTTCAGATTAA+TGG 0.120288 8_3:-5272599 Msa1271820:intron
TCCGATCCACAAAGAAATTT+AGG 0.164748 8_3:-5274359 Msa1271820:five_prime_UTR
CTATATGAATACACTATTTA+TGG 0.194206 8_3:+5268573 None:intergenic
ACTCAACATTGCTCAGAAAT+AGG 0.200598 8_3:+5268468 None:intergenic
CCTCTTCTGCAGTCTCTTAA+AGG 0.203548 8_3:+5272240 None:intergenic
CTGAAAGACGCCCAACTTAT+AGG 0.217326 8_3:-5270917 Msa1271820:CDS
CTTGTTTGGTTAAGGATTAA+TGG 0.234976 8_3:-5269374 Msa1271820:three_prime_UTR
AAGGAGAAGTTGAAGCATTA+TGG 0.243038 8_3:-5272370 Msa1271820:CDS
GGACAGTGATACCCTCTATT+TGG 0.255911 8_3:-5272549 Msa1271820:CDS
GGCAGCCGAAGTTCTATTTC+TGG 0.258447 8_3:-5270332 Msa1271820:CDS
AGTAGAGTTGCTGCAGATTA+TGG 0.261306 8_3:-5270954 Msa1271820:CDS
TTGGGATGTGTTGGTGTTGT+AGG 0.263448 8_3:-5269160 Msa1271820:three_prime_UTR
AAACCGTGGATTTGCATTCT+TGG 0.273692 8_3:-5272293 Msa1271820:CDS
CCGATCCACAAAGAAATTTA+GGG 0.280589 8_3:-5274358 Msa1271820:five_prime_UTR
GCAGCACGAGCAGTACTTCT+AGG 0.280985 8_3:+5270858 None:intergenic
ATGACGGCCTTTGAAGCTTA+TGG 0.290365 8_3:-5269706 Msa1271820:three_prime_UTR
CGTGATTATGATTCTCTATC+TGG 0.292725 8_3:-5270735 Msa1271820:CDS
ATGTTATGAAGCTTACAATT+TGG 0.313318 8_3:-5269683 Msa1271820:three_prime_UTR
GAGAGACGAGCGTCTAGATT+TGG 0.313762 8_3:-5273192 Msa1271820:CDS
TTACATGGGCAGCGGTGGTT+CGG 0.320424 8_3:-5269951 Msa1271820:CDS
CAATAATGTCAAGGCCTTCT+TGG 0.321408 8_3:-5271301 Msa1271820:CDS
GTAGAAGATTCTAATGATAA+AGG 0.321671 8_3:-5272319 Msa1271820:CDS
AAATAATTACTATGCGAAAT+CGG 0.321968 8_3:+5268975 None:intergenic
ACAGATCCGACATAATAAAT+TGG 0.322938 8_3:-5269739 Msa1271820:intron
AGAAGATGAAGAGGAGGTTA+AGG 0.326174 8_3:-5273234 Msa1271820:CDS
CGGAATCTTCTGAAGAAATA+TGG 0.327291 8_3:-5271633 Msa1271820:CDS
GACTATGGATTTGTTACCTT+TGG 0.329610 8_3:-5271558 Msa1271820:CDS
CAGCATTACTGGTACAGAAT+TGG 0.331570 8_3:-5271505 Msa1271820:CDS
AGTAATAAGAATACTACTTC+AGG 0.334390 8_3:-5269211 Msa1271820:three_prime_UTR
GTTATTGAATTTGTGATGTA+TGG 0.337285 8_3:-5269550 Msa1271820:three_prime_UTR
TGCTCCAATACCATTTCATT+TGG 0.338317 8_3:-5269422 Msa1271820:three_prime_UTR
GTCTTCGGAGGCATTGTTAT+TGG 0.339548 8_3:+5274323 None:intergenic
TTGATGCACTTCCTCCTTCA+TGG 0.343649 8_3:-5271671 Msa1271820:CDS
AGATGTGCTGACAGCATTAC+TGG 0.343835 8_3:-5271516 Msa1271820:CDS
ATTGGGTGAAGGTGACAAAA+AGG 0.345418 8_3:-5271487 Msa1271820:intron
CATATTTCTTCAGAAGATTC+CGG 0.347028 8_3:+5271634 None:intergenic
ACTCTAGTTTAGCTCTTGTT+AGG 0.347194 8_3:-5268217 Msa1271820:three_prime_UTR
GGCTAGAGATGCTACTTGTT+TGG 0.347463 8_3:-5269388 Msa1271820:three_prime_UTR
AGATGCTACTTGTTTGGTTA+AGG 0.350748 8_3:-5269382 Msa1271820:three_prime_UTR
CGAAACCCTAAATTTCTTTG+TGG 0.355378 8_3:+5274353 None:intergenic
TTAAGAAGATATTGCTCGTT+AGG 0.359179 8_3:-5268523 Msa1271820:three_prime_UTR
TCTGCAGCAACTCTACTTCT+TGG 0.363608 8_3:+5270960 None:intergenic
TGAAAGACGCCCAACTTATA+GGG 0.364958 8_3:-5270916 Msa1271820:CDS
GTTGGTGAAGAAGGTGATTC+AGG 0.368423 8_3:-5273047 Msa1271820:CDS
AAAGAGATGTTTAGTTACTT+TGG 0.370338 8_3:-5269300 Msa1271820:three_prime_UTR
TCACTGGGCGTGGGTTATTA+CGG 0.372222 8_3:-5268354 Msa1271820:three_prime_UTR
TGTTAGGTAACATACCTATA+TGG 0.373043 8_3:-5268252 Msa1271820:three_prime_UTR
TACATGGGCAGCGGTGGTTC+GGG 0.376852 8_3:-5269950 Msa1271820:CDS
AAGAATTTGAAGTATTTGTT+GGG 0.376985 8_3:-5272875 Msa1271820:CDS
TCTGCAAATGAAACCTTTGC+AGG 0.379216 8_3:+5272193 None:intergenic
AAAGAATTTGAAGTATTTGT+TGG 0.379388 8_3:-5272876 Msa1271820:CDS
TCATATTCATCAATGTATTC+TGG 0.380188 8_3:-5269998 Msa1271820:CDS
CTCAACATTGCTCAGAAATA+GGG 0.381387 8_3:+5268469 None:intergenic
AGCAGTGTGAAGAGAGATTA+TGG 0.381697 8_3:-5271005 Msa1271820:CDS
GAACCTCTCTTTGGCGTCTT+CGG 0.383318 8_3:+5274308 None:intergenic
TCGCGTGGGGTAAGAGGAAT+TGG 0.383971 8_3:-5271248 Msa1271820:CDS
AATTTAATTAATATATTCAC+TGG 0.386689 8_3:-5268370 Msa1271820:three_prime_UTR
ACTCAAGACAACCAACGATA+TGG 0.390525 8_3:+5268609 None:intergenic
TTCTCGTCGCGTGGGGTAAG+AGG 0.394358 8_3:-5271254 Msa1271820:CDS
TGTTTGCTTTGCTGTACTGC+AGG 0.395507 8_3:-5268297 Msa1271820:three_prime_UTR
CATAATAAATTGGCTGCAAT+AGG 0.395636 8_3:-5269729 Msa1271820:three_prime_UTR
CTGTCCAAATGAAATGGTAT+TGG 0.397342 8_3:+5269418 None:intergenic
CTATTTATAACATTATATTT+GGG 0.403985 8_3:-5269644 Msa1271820:three_prime_UTR
ATCACCGTCTTCTCTTCAAC+AGG 0.406089 8_3:+5274200 None:intergenic
CAACTCCCGACCCACATTGT+TGG 0.407711 8_3:-5268669 Msa1271820:three_prime_UTR
GACAGTGATACCCTCTATTT+GGG 0.407780 8_3:-5272548 Msa1271820:CDS
TCAAGCTAGGTAGGGTGGGG+GGG 0.409790 8_3:+5268798 None:intergenic
GCTCTCATCAAGCTCTTGTT+AGG 0.413863 8_3:-5268268 Msa1271820:three_prime_UTR
ATCAAGCTAGGTAGGGTGGG+GGG 0.414623 8_3:+5268797 None:intergenic
CAGAAGAGGGATGTTACGTT+TGG 0.419497 8_3:-5272226 Msa1271820:CDS
CCCTAAATTTCTTTGTGGAT+CGG 0.421203 8_3:+5274358 None:intergenic
TGCATATGTTTCCCAAATAG+AGG 0.423070 8_3:+5272537 None:intergenic
AATAATTACTATGCGAAATC+GGG 0.424824 8_3:+5268976 None:intergenic
TCTGGTAGGGGCACGGGTGG+CGG 0.427281 8_3:-5269980 Msa1271820:CDS
TCACAGTACGGTGATGCTTA+TGG 0.427536 8_3:-5270483 Msa1271820:CDS
GGAAGATCTAGTCTTGGATA+TGG 0.430356 8_3:-5270359 Msa1271820:CDS
GAAGTCGTGCTCCGCCAATC+AGG 0.430648 8_3:-5271226 Msa1271820:CDS
TTAATTAAATTATTAAATGC+AGG 0.434111 8_3:+5268382 None:intergenic
GCAAATGAACCAACATAAAT+CGG 0.435326 8_3:-5268759 Msa1271820:three_prime_UTR
GAGGTGGCCTCTCATACCTT+TGG 0.437240 8_3:+5270802 None:intergenic
CTTGTCAATTCAAGCTATCT+CGG 0.438251 8_3:-5269600 Msa1271820:three_prime_UTR
AGCTTGATTTAGAAAAGCTC+GGG 0.442733 8_3:-5268782 Msa1271820:three_prime_UTR
CTACCCGCTGAACCTCTCTT+TGG 0.444963 8_3:+5274299 None:intergenic
GGGTGGCGGTAGCAGTTACA+TGG 0.445852 8_3:-5269966 Msa1271820:CDS
ATTAATATATTCACTGGGCG+TGG 0.447220 8_3:-5268364 Msa1271820:three_prime_UTR
GACAACCAACGATATGGTTC+GGG 0.447264 8_3:+5268615 None:intergenic
AGACAACCAACGATATGGTT+CGG 0.450861 8_3:+5268614 None:intergenic
CGTTCATATATGCATATGAA+TGG 0.451547 8_3:-5268191 Msa1271820:three_prime_UTR
CTTCAGTAGCATCCTTGTCT+AGG 0.455597 8_3:+5272850 None:intergenic
GTGAACAGTTATATCCATAT+AGG 0.457194 8_3:+5268238 None:intergenic
TGATGAGAAGGAAATTGAAC+AGG 0.459626 8_3:-5273120 Msa1271820:CDS
GGTAGTGGCCTACTTCTAAC+TGG 0.460415 8_3:+5271164 None:intergenic
ACTCCAATCGAGCTCTTGAT+TGG 0.460826 8_3:+5270526 None:intergenic
TCTGCTGAATGTATCAAAGT+TGG 0.463094 8_3:-5269343 Msa1271820:three_prime_UTR
GCTCGATTGGAGTATGACTA+TGG 0.463175 8_3:-5270516 Msa1271820:CDS
TGATGCACTTCCTCCTTCAT+GGG 0.463181 8_3:-5271670 Msa1271820:CDS
TGAAAATAAAGTAACAGAAA+AGG 0.463780 8_3:-5268851 Msa1271820:three_prime_UTR
ATGTATTCTGGTAGGGGCAC+GGG 0.463809 8_3:-5269986 Msa1271820:CDS
TGGTCTCTGTCCAAATGAAA+TGG 0.464020 8_3:+5269412 None:intergenic
GATCTAGCTGGAGGAGGTAG+TGG 0.465085 8_3:+5271149 None:intergenic
AGCATTACTGGTACAGAATT+GGG 0.466603 8_3:-5271504 Msa1271820:CDS
AGTCGGCAGGGCATGAGTTA+TGG 0.470717 8_3:-5270284 Msa1271820:CDS
CAACAATGTGGGTCGGGAGT+TGG 0.472402 8_3:+5268670 None:intergenic
GGTTCGGGATCTTATTATTG+AGG 0.473492 8_3:-5269935 Msa1271820:intron
TTCAGGCCAAAGTGAGGGCT+AGG 0.475005 8_3:-5271397 Msa1271820:intron
AAATCAAGCTAGGTAGGGTG+GGG 0.475225 8_3:+5268795 None:intergenic
ATTGACAAAGAAATCACAAA+TGG 0.476354 8_3:-5268734 Msa1271820:three_prime_UTR
GCTGCTCGTAGAAAGGACTA+TGG 0.479913 8_3:-5271573 Msa1271820:CDS
GAGTATGAACCTGAGGAGTA+TGG 0.481139 8_3:-5273155 Msa1271820:CDS
ATGTGGTGTTACTCCGAGTC+AGG 0.485653 8_3:-5272570 Msa1271820:CDS
TTGGGGTTGTGACTGAGGTC+AGG 0.486683 8_3:-5272800 Msa1271820:CDS
AGCTATCTCGGGTCTTCTCT+AGG 0.487176 8_3:-5269588 Msa1271820:three_prime_UTR
GGTGGATAATCCCTATAAGT+TGG 0.487528 8_3:+5270906 None:intergenic
TTCATCAATGTATTCTGGTA+GGG 0.489027 8_3:-5269993 Msa1271820:CDS
TAACATTATCCACCCACAAA+TGG 0.489703 8_3:+5269457 None:intergenic
ATTATCTTGCAGTCCACCTC+AGG 0.491057 8_3:+5269046 None:intergenic
TTTCATATTCACTTGAGTGA+TGG 0.491336 8_3:+5268869 None:intergenic
TGGGGTGTATAGCAGTCGGC+AGG 0.491775 8_3:-5270297 Msa1271820:CDS
AAACTATGCAGGTTACTAGA+TGG 0.492265 8_3:+5268999 None:intergenic
GGGCGTCCTTCACGATAACT+TGG 0.494376 8_3:+5270759 None:intergenic
CCCCGTAGTTTCTCGTCGCG+TGG 0.495353 8_3:-5271263 Msa1271820:CDS
GACAACCAACAATGTGGGTC+GGG 0.497247 8_3:+5268664 None:intergenic
GGTGATTGAAGAAGAGATCA+AGG 0.499484 8_3:-5274183 Msa1271820:CDS
CATGCCAGCTGCTCGTAGAA+AGG 0.501010 8_3:-5271580 Msa1271820:CDS
CGAGGAAAACATGTTGGTCG+TGG 0.504059 8_3:-5271350 Msa1271820:CDS
ATAGCTTTATCTTCAACGAC+AGG 0.505439 8_3:+5274110 None:intergenic
TAGCTTGATTTAGAAAAGCT+CGG 0.505512 8_3:-5268783 Msa1271820:three_prime_UTR
AAATGTTGAGGATATAACTT+TGG 0.505813 8_3:-5272341 Msa1271820:CDS
GTGGATAATCCCTATAAGTT+GGG 0.506076 8_3:+5270907 None:intergenic
TTGATTTATGATACCATTTG+TGG 0.506608 8_3:-5269470 Msa1271820:three_prime_UTR
CTTCTATCATAAGATCTAGC+TGG 0.506659 8_3:+5271137 None:intergenic
TTAGCATCTTCTACAGCCTC+AGG 0.507277 8_3:+5274068 None:intergenic
AGATGGTCATGATGAAATTG+AGG 0.507610 8_3:-5273009 Msa1271820:CDS
TGTCTATACCAGTTAGAAGT+AGG 0.507727 8_3:-5271172 Msa1271820:CDS
CTTTAGCTTCTGCATTGTAG+TGG 0.508113 8_3:-5268898 Msa1271820:three_prime_UTR
ATTCATCAATGTATTCTGGT+AGG 0.509049 8_3:-5269994 Msa1271820:CDS
TAAATCAAGCTAGGTAGGGT+GGG 0.514078 8_3:+5268794 None:intergenic
GAACTGATAATATTTGCTGC+TGG 0.515056 8_3:-5269095 Msa1271820:three_prime_UTR
GGCATGTACTCATCAAGTTA+TGG 0.517277 8_3:-5270146 Msa1271820:CDS
ACAAATGGTATCATAAATCA+AGG 0.517968 8_3:+5269472 None:intergenic
TTGAAAAGATTGAGCTTGCA+AGG 0.519002 8_3:-5271605 Msa1271820:CDS
ATGAATACACTATTTATGGT+AGG 0.519124 8_3:+5268577 None:intergenic
GGCGGTGATTATGTTTCTCG+TGG 0.519995 8_3:-5270125 Msa1271820:CDS
ACGATAACTTGGATGGGAAG+GGG 0.520335 8_3:+5270770 None:intergenic
TGTCAATGACCGATTTATGT+TGG 0.520554 8_3:+5268750 None:intergenic
TAGTCCTTTCTACGAGCAGC+TGG 0.522172 8_3:+5271576 None:intergenic
TCGCCAATCAAGAGCTCGAT+TGG 0.522669 8_3:-5270529 Msa1271820:CDS
CACGATAACTTGGATGGGAA+GGG 0.522951 8_3:+5270769 None:intergenic
TTGCAGCCAATTTATTATGT+CGG 0.523352 8_3:+5269733 None:intergenic
GTTTGCTTTGCTGTACTGCA+GGG 0.523702 8_3:-5268296 Msa1271820:three_prime_UTR
CATGGGATGAAGATTATGTC+CGG 0.524547 8_3:-5271653 Msa1271820:CDS
TTAATATATTCACTGGGCGT+GGG 0.524594 8_3:-5268363 Msa1271820:three_prime_UTR
AAGAGAGGTTCAGCGGGTAG+TGG 0.526935 8_3:-5274296 Msa1271820:CDS
GAAGAAAATGTTGGTGAAGA+AGG 0.528899 8_3:-5273056 Msa1271820:CDS
GGATTATCTTCTTCCACCAC+AGG 0.529137 8_3:+5274131 None:intergenic
CCCCACGCGACGAGAAACTA+CGG 0.529221 8_3:+5271261 None:intergenic
CCTCTCTTTGGCGTCTTCGG+AGG 0.529474 8_3:+5274311 None:intergenic
GACGAGAAACTACGGGGTGC+AGG 0.529835 8_3:+5271269 None:intergenic
TGATGAAATTGAGGGAGAAG+AGG 0.531641 8_3:-5273000 Msa1271820:CDS
TGATTTATGATACCATTTGT+GGG 0.531763 8_3:-5269469 Msa1271820:three_prime_UTR
TTCCTCCCGCTCAGATGCAA+TGG 0.532515 8_3:-5272266 Msa1271820:CDS
AATGTATTCTGGTAGGGGCA+CGG 0.532761 8_3:-5269987 Msa1271820:CDS
TCATATAGTATACATCTTGA+AGG 0.532816 8_3:-5268558 Msa1271820:three_prime_UTR
TTGTCAATTCAAGCTATCTC+GGG 0.532836 8_3:-5269599 Msa1271820:three_prime_UTR
GTCCTTCACGATAACTTGGA+TGG 0.535270 8_3:+5270763 None:intergenic
TGGGTTATTACGGACTGACT+TGG 0.535832 8_3:-5268344 Msa1271820:three_prime_UTR
CTAAATCAAGCTAGGTAGGG+TGG 0.535850 8_3:+5268793 None:intergenic
AATCAAGCTAGGTAGGGTGG+GGG 0.536002 8_3:+5268796 None:intergenic
TCTAGTCTTGGATATGGTAG+TGG 0.536113 8_3:-5270353 Msa1271820:CDS
GAAGGAAATTGAACAGGAAG+AGG 0.536425 8_3:-5273114 Msa1271820:CDS
TGAGGTGGGAGATGAAGTTG+AGG 0.536948 8_3:-5273087 Msa1271820:CDS
TTTCCTCGGCCTCTCTGAAG+TGG 0.538452 8_3:+5271365 None:intergenic
ATCTCGGGTCTTCTCTAGGT+GGG 0.538541 8_3:-5269584 Msa1271820:three_prime_UTR
GGTGGCAGTGCTTCACAGTA+CGG 0.540610 8_3:-5270495 Msa1271820:CDS
TTTGACAGAAGATGAAGAGG+AGG 0.540760 8_3:-5273240 Msa1271820:intron
ATAACATCCATAAGCTTCAA+AGG 0.541184 8_3:+5269699 None:intergenic
TCCTTCACGATAACTTGGAT+GGG 0.541440 8_3:+5270764 None:intergenic
TGACCGTGAGCGTGCGGAGA+TGG 0.541802 8_3:-5272952 Msa1271820:CDS
GGATGACGAGCATGCTGATG+AGG 0.542036 8_3:-5272979 Msa1271820:CDS
ACAAGTAGCATCTCTAGCCT+TGG 0.543111 8_3:+5269392 None:intergenic
GGCATCCATTGCATCTGAGC+GGG 0.544260 8_3:+5272261 None:intergenic
AAGTGAGGGCTAGGTTATCA+AGG 0.544468 8_3:-5271388 Msa1271820:CDS
TCATCCACGTAACCTCTCCT+AGG 0.544554 8_3:+5270834 None:intergenic
TGAATACACTATTTATGGTA+GGG 0.545218 8_3:+5268578 None:intergenic
AGGCCACTTCAGAGAGGCCG+AGG 0.545426 8_3:-5271368 Msa1271820:CDS
CTAGCACTGATAGACCTGAT+TGG 0.546036 8_3:+5271212 None:intergenic
ATATGGTTCGGGAGTTGGAA+AGG 0.546047 8_3:+5268626 None:intergenic
ACGCCAAAGAGAGGTTCAGC+GGG 0.548771 8_3:-5274302 Msa1271820:CDS
TTTAGCTTCTGCATTGTAGT+GGG 0.549715 8_3:-5268897 Msa1271820:three_prime_UTR
GCAGCAACTCTACTTCTTGG+AGG 0.550856 8_3:+5270963 None:intergenic
GCGAAATCGGGAAACTATGC+AGG 0.552820 8_3:+5268988 None:intergenic
GCAGGTCGGCTGCTCCAAGA+AGG 0.553373 8_3:+5271287 None:intergenic
CCTTTAAGAGACTGCAGAAG+AGG 0.553892 8_3:-5272240 Msa1271820:CDS
TGATAACCTAGCCCTCACTT+TGG 0.554695 8_3:+5271391 None:intergenic
AGCGGGTAGTGGTTCAAAGA+GGG 0.555066 8_3:-5274285 Msa1271820:CDS
GCATATGTTTCCCAAATAGA+GGG 0.556114 8_3:+5272538 None:intergenic
CGATAACTTGGATGGGAAGG+GGG 0.557684 8_3:+5270771 None:intergenic
TTTCTAAATCAAGCTAGGTA+GGG 0.557945 8_3:+5268790 None:intergenic
TAAAATGAATACTTATGCAT+AGG 0.558067 8_3:+5268422 None:intergenic
GGGGACTATCGCCCGAGTCG+CGG 0.559741 8_3:-5271329 Msa1271820:CDS
GTGTTGTAGGATTTGTGACA+TGG 0.559819 8_3:-5269147 Msa1271820:three_prime_UTR
ACGGTGATGCTTATGGTGAT+AGG 0.560365 8_3:-5270476 Msa1271820:intron
ACAAGGGATTTGCATTCTTG+CGG 0.561118 8_3:-5272749 Msa1271820:CDS
CAGCACGAGCAGTACTTCTA+GGG 0.561773 8_3:+5270859 None:intergenic
TCACGATAACTTGGATGGGA+AGG 0.562072 8_3:+5270768 None:intergenic
TCATCAATGTATTCTGGTAG+GGG 0.563889 8_3:-5269992 Msa1271820:CDS
TCTTATGATAGAAGACCAGC+TGG 0.564284 8_3:-5271128 Msa1271820:intron
ACAGGAAGAGGGACATGAGG+TGG 0.565462 8_3:-5273102 Msa1271820:CDS
TATGGTTCGGGAGTTGGAAA+GGG 0.565701 8_3:+5268627 None:intergenic
AGACGAGCGTCTAGATTTGG+AGG 0.566469 8_3:-5273189 Msa1271820:CDS
TTGCTGCAGATTATGGATCA+AGG 0.567085 8_3:-5270947 Msa1271820:CDS
GGCGAGGAAGAAGTCGAAGA+TGG 0.567156 8_3:-5273026 Msa1271820:CDS
AGGAGAGGTTACGTGGATGA+TGG 0.568734 8_3:-5270831 Msa1271820:CDS
GGGTGATGAAATTATGTCAC+AGG 0.569604 8_3:-5272155 Msa1271820:intron
AGAATTTGAAGTATTTGTTG+GGG 0.569779 8_3:-5272874 Msa1271820:CDS
AGCAGCATCGTGTGAGCCAA+AGG 0.572202 8_3:+5271542 None:intergenic
TATGGCGGTAATGATGTTGG+AGG 0.573247 8_3:-5270167 Msa1271820:CDS
TCAACCCCACCATACTCCTC+AGG 0.573263 8_3:+5273146 None:intergenic
CAACTCCCGAACCATATCGT+TGG 0.573646 8_3:-5268620 Msa1271820:three_prime_UTR
GTTCCTGTGATGTAGGTTGG+TGG 0.574215 8_3:-5270025 Msa1271820:intron
GATGGTCATGATGAAATTGA+GGG 0.574247 8_3:-5273008 Msa1271820:CDS
TGCAGAAGCTAAAGATTCTG+TGG 0.576513 8_3:+5268907 None:intergenic
TGGAGTTGATAAGCCTGCAA+AGG 0.576604 8_3:-5272206 Msa1271820:CDS
AGAAGAGAATCTCGTTGTTG+AGG 0.578538 8_3:-5274159 Msa1271820:CDS
ATTCTTGCGGTTTGAAAATG+TGG 0.580185 8_3:-5272736 Msa1271820:CDS
TATTCTGGTAGGGGCACGGG+TGG 0.580301 8_3:-5269983 Msa1271820:CDS
AGCAGTTACATGGGCAGCGG+TGG 0.581899 8_3:-5269956 Msa1271820:CDS
GGACTCAAGTTAGTGAGCGA+TGG 0.582663 8_3:-5269529 Msa1271820:three_prime_UTR
CTTCTTTCAGGCCAAAGTGA+GGG 0.583789 8_3:-5271402 Msa1271820:intron
GAGGAAAACATGTTGGTCGT+GGG 0.584426 8_3:-5271349 Msa1271820:CDS
TCTTCTTTCAGGCCAAAGTG+AGG 0.584613 8_3:-5271403 Msa1271820:intron
ATAAGTTGGGCGTCTTTCAG+AGG 0.585266 8_3:+5270920 None:intergenic
TCTTATGGCGGTAATGATGT+TGG 0.585997 8_3:-5270170 Msa1271820:CDS
GGTAGCAGTTACATGGGCAG+CGG 0.586041 8_3:-5269959 Msa1271820:CDS
AGTATACATCTTGAAGGAGG+AGG 0.586205 8_3:-5268552 Msa1271820:three_prime_UTR
GCGTGCGGAGATGGCTGATG+TGG 0.586432 8_3:-5272943 Msa1271820:CDS
CTTTAAGAGACTGCAGAAGA+GGG 0.587293 8_3:-5272239 Msa1271820:CDS
ATTCCAAGAATGCAAATCCA+CGG 0.588526 8_3:+5272290 None:intergenic
ATTATTGCAGATCCGCGACT+CGG 0.588971 8_3:+5271317 None:intergenic
TGAATGTACTTCATGCACCC+TGG 0.589383 8_3:-5268826 Msa1271820:three_prime_UTR
ATGAACCTGAGGAGTATGGT+GGG 0.592467 8_3:-5273151 Msa1271820:CDS
CTAACTGGTATAGACATGAC+AGG 0.592654 8_3:+5271179 None:intergenic
TTCCGATCAGGCTCTTATGG+CGG 0.592662 8_3:-5270182 Msa1271820:intron
TCATAAGATCTAGCTGGAGG+AGG 0.592974 8_3:+5271143 None:intergenic
TTATGGAGTTACAAATGTTG+AGG 0.593298 8_3:-5272353 Msa1271820:CDS
GCAACTCTACTTCTTGGAGG+TGG 0.594233 8_3:+5270966 None:intergenic
TACTCCTCAGGTTCATACTC+AGG 0.594399 8_3:+5273158 None:intergenic
ATTTAATTAATATATTCACT+GGG 0.594789 8_3:-5268369 Msa1271820:three_prime_UTR
CACATGGGGTGTATAGCAGT+CGG 0.596161 8_3:-5270301 Msa1271820:CDS
CGGCAGGGCATGAGTTATGG+TGG 0.596513 8_3:-5270281 Msa1271820:CDS
AGGGTATCACTGTCCTGACT+CGG 0.597119 8_3:+5272557 None:intergenic
TTATTGCAGATCCGCGACTC+GGG 0.598224 8_3:+5271318 None:intergenic
CTTGACCAGAAATAGAACTT+CGG 0.598989 8_3:+5270327 None:intergenic
ATTTCTGGTCAAGATTCACA+TGG 0.599253 8_3:-5270317 Msa1271820:CDS
ATCGTGAAGTTGTGAAGGAG+AGG 0.601698 8_3:-5272908 Msa1271820:CDS
TTGTGAAGGAGAGGCGAAAG+CGG 0.603327 8_3:-5272899 Msa1271820:CDS
CAGCGGGTAGTGGTTCAAAG+AGG 0.603447 8_3:-5274286 Msa1271820:CDS
TGGGAAACATATGCAAAACA+TGG 0.603494 8_3:-5272529 Msa1271820:CDS
GGAACATCGTGAAGTTGTGA+AGG 0.603844 8_3:-5272913 Msa1271820:CDS
GAAGAACCTGAAGAAAATGT+TGG 0.605476 8_3:-5273065 Msa1271820:CDS
TGATTGGCGAGCACCAGTAT+CGG 0.605757 8_3:+5270542 None:intergenic
AGAGTCGGAAGATCTAGTCT+TGG 0.608797 8_3:-5270365 Msa1271820:CDS
CCGTAGTTTCTCGTCGCGTG+GGG 0.609247 8_3:-5271261 Msa1271820:CDS
AGACAACCAACAATGTGGGT+CGG 0.609812 8_3:+5268663 None:intergenic
CCTCCGAAGACGCCAAAGAG+AGG 0.610557 8_3:-5274311 Msa1271820:CDS
TGGATGATGGTTACAGCCAA+AGG 0.611800 8_3:-5270818 Msa1271820:CDS
CAGGAAGAGGGACATGAGGT+GGG 0.612912 8_3:-5273101 Msa1271820:CDS
CAGATTAATGGAAAACAATG+TGG 0.614039 8_3:-5272587 Msa1271820:CDS
ATCCATTGCATCTGAGCGGG+AGG 0.615124 8_3:+5272264 None:intergenic
TACTGAAGATGATCTGAGGA+AGG 0.616779 8_3:-5272835 Msa1271820:CDS
ACATAATCTTCATCCCATGA+AGG 0.617754 8_3:+5271657 None:intergenic
TCCCATCCAAGTTATCGTGA+AGG 0.617871 8_3:-5270765 Msa1271820:CDS
TGAACCTGTTGAAGAGAAGA+CGG 0.620053 8_3:-5274204 Msa1271820:CDS
GCGGGTAGTGGTTCAAAGAG+GGG 0.620078 8_3:-5274284 Msa1271820:CDS
TATCTCGGGTCTTCTCTAGG+TGG 0.620442 8_3:-5269585 Msa1271820:three_prime_UTR
TTTCATTTGGACAGAGACCA+AGG 0.620910 8_3:-5269409 Msa1271820:three_prime_UTR
GCACTGATAGACCTGATTGG+CGG 0.621354 8_3:+5271215 None:intergenic
TATGAATCAAATTGCTCCTG+AGG 0.621990 8_3:-5274084 Msa1271820:CDS
GGAGCATGACCGTGAGCGTG+CGG 0.623217 8_3:-5272958 Msa1271820:CDS
TGGGGTTGACTATGATGAGA+AGG 0.623447 8_3:-5273132 Msa1271820:CDS
AGAGGCCGAGGAAAACATGT+TGG 0.624816 8_3:-5271356 Msa1271820:CDS
TTTCTGGTCAAGATTCACAT+GGG 0.629433 8_3:-5270316 Msa1271820:CDS
AAGGAAATTGAACAGGAAGA+GGG 0.629624 8_3:-5273113 Msa1271820:CDS
CTCAAGACAACCAACAATGT+GGG 0.630768 8_3:+5268659 None:intergenic
GTGTGAAGAGAGATTATGGT+CGG 0.631539 8_3:-5271001 Msa1271820:CDS
AGAAACTACGGGGTGCAGGT+CGG 0.632474 8_3:+5271273 None:intergenic
TGAAGTTGGGGTTGTGACTG+AGG 0.635514 8_3:-5272805 Msa1271820:CDS
CAGGGCATGAGTTATGGTGG+AGG 0.638372 8_3:-5270278 Msa1271820:intron
AATTGGCTGCAATAGGATGA+CGG 0.638558 8_3:-5269722 Msa1271820:three_prime_UTR
GTTACAGCCAAAGGTATGAG+AGG 0.639419 8_3:-5270809 Msa1271820:CDS
GTACTGCTCGTGCTGCACCT+AGG 0.640481 8_3:-5270851 Msa1271820:CDS
AATGATAAAGGAACAAACCG+TGG 0.644326 8_3:-5272307 Msa1271820:CDS
ACTCAAGACAACCAACAATG+TGG 0.644646 8_3:+5268658 None:intergenic
GCGGATCTGCAATAATGTCA+AGG 0.645997 8_3:-5271310 Msa1271820:CDS
GATGGCTGATGTGGATGAAG+AGG 0.646717 8_3:-5272934 Msa1271820:CDS
CATATGCAAAACATGGACAA+AGG 0.647157 8_3:-5272522 Msa1271820:CDS
AGGAAAACATGTTGGTCGTG+GGG 0.647706 8_3:-5271348 Msa1271820:CDS
TGATCCTGAGTATGAACCTG+AGG 0.648209 8_3:-5273162 Msa1271820:CDS
GACGCCAAAGAGAGGTTCAG+CGG 0.648754 8_3:-5274303 Msa1271820:CDS
GCTCGTGCTGCACCTAGGAG+AGG 0.649097 8_3:-5270846 Msa1271820:CDS
ACTGGTACAGAATTGGGTGA+AGG 0.649153 8_3:-5271498 Msa1271820:CDS
ATGCTACTGAAGATGATCTG+AGG 0.650341 8_3:-5272839 Msa1271820:CDS
TATAGTATACATCTTGAAGG+AGG 0.651097 8_3:-5268555 Msa1271820:three_prime_UTR
TAATCTTCATCCCATGAAGG+AGG 0.656027 8_3:+5271660 None:intergenic
TGAACAGGAAGAGGGACATG+AGG 0.656320 8_3:-5273105 Msa1271820:CDS
GGGGTGTATAGCAGTCGGCA+GGG 0.660281 8_3:-5270296 Msa1271820:CDS
GGTGGCGGTAGCAGTTACAT+GGG 0.660439 8_3:-5269965 Msa1271820:CDS
TGCACCTAGGAGAGGTTACG+TGG 0.661010 8_3:-5270838 Msa1271820:CDS
GAATTTGAAGTATTTGTTGG+GGG 0.661371 8_3:-5272873 Msa1271820:CDS
CTATCATAAGATCTAGCTGG+AGG 0.665556 8_3:+5271140 None:intergenic
TTCTGGTCAAGATTCACATG+GGG 0.667528 8_3:-5270315 Msa1271820:CDS
TATAGGGATTATCCACCTCG+TGG 0.670506 8_3:-5270900 Msa1271820:CDS
CCAGTATCGGCGTATCTTGG+GGG 0.678120 8_3:+5270555 None:intergenic
CGATTGGAGTATGACTATGG+TGG 0.680575 8_3:-5270513 Msa1271820:CDS
TATGAACCTGAGGAGTATGG+TGG 0.681041 8_3:-5273152 Msa1271820:CDS
GAGTAGTCAGATCCACGAGG+TGG 0.682031 8_3:+5270888 None:intergenic
TCTTCTGAAGAAATATGGCG+AGG 0.682225 8_3:-5271628 Msa1271820:CDS
GTGACATAATTTCATCACCC+GGG 0.686563 8_3:+5272158 None:intergenic
TGAAGAAGGTGATTCAGGCG+AGG 0.686633 8_3:-5273042 Msa1271820:CDS
ATGTACTCATCAAGTTATGG+CGG 0.691988 8_3:-5270143 Msa1271820:CDS
GGTAGTGGTTCAAAGAGGGG+TGG 0.693327 8_3:-5274281 Msa1271820:CDS
TTTATGATACCATTTGTGGG+TGG 0.694018 8_3:-5269466 Msa1271820:three_prime_UTR
TGTGACATAATTTCATCACC+CGG 0.700332 8_3:+5272157 None:intergenic
AGGCATCCATTGCATCTGAG+CGG 0.701954 8_3:+5272260 None:intergenic
GATAGAGAATCATAATCACG+AGG 0.709014 8_3:+5270738 None:intergenic
GCTTGATTTAGAAAAGCTCG+GGG 0.709373 8_3:-5268781 Msa1271820:three_prime_UTR
TAACTGGTATAGACATGACA+GGG 0.713524 8_3:+5271180 None:intergenic
AGGGGTGGCAGATTATCGAG+AGG 0.718242 8_3:-5274266 Msa1271820:CDS
GCAAAGCAAACAGAACAGTG+TGG 0.727441 8_3:+5268308 None:intergenic
ATAGAGAATCATAATCACGA+GGG 0.739313 8_3:+5270739 None:intergenic
TGAACCTGAGGAGTATGGTG+GGG 0.741917 8_3:-5273150 Msa1271820:CDS
TTATCAAGGCCACTTCAGAG+AGG 0.757296 8_3:-5271374 Msa1271820:CDS
TCAGAGTAGTCAGATCCACG+AGG 0.788482 8_3:+5270885 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAAAAATCTTACTTT+TGG + chr8_3:5268482-5268501 None:intergenic 10.0%
!!! AAAGTTAACTTTTTAAATTA+TGG - chr8_3:5268522-5268541 Msa1271820:three_prime_UTR 10.0%
!!! ATTGATTTTTTTTATATTTG+GGG - chr8_3:5268615-5268634 Msa1271820:three_prime_UTR 10.0%
!!! TTTTTGTATGAATTATTTTT+CGG - chr8_3:5268948-5268967 Msa1271820:three_prime_UTR 10.0%
!!! TTATTATGAATTTACTTTTA+AGG - chr8_3:5270693-5270712 Msa1271820:intron 10.0%
!!! TATTATGAATTTACTTTTAA+GGG - chr8_3:5270694-5270713 Msa1271820:intron 10.0%
!! CTATTTATAACATTATATTT+GGG - chr8_3:5272875-5272894 Msa1271820:CDS 10.0%
!! TTAATTAAATTATTAAATGC+AGG + chr8_3:5274140-5274159 None:intergenic 10.0%
!! AATTTAATTAATATATTCAC+TGG - chr8_3:5274149-5274168 Msa1271820:CDS 10.0%
!! ATTTAATTAATATATTCACT+GGG - chr8_3:5274150-5274169 Msa1271820:CDS 10.0%
!!! TTAAATTGTTTATGGATTAT+TGG - chr8_3:5268642-5268661 Msa1271820:three_prime_UTR 15.0%
!!! TAAATTGTTTATGGATTATT+GGG - chr8_3:5268643-5268662 Msa1271820:three_prime_UTR 15.0%
!!! TATGGTAATTGTAATTTTTA+AGG - chr8_3:5268691-5268710 Msa1271820:three_prime_UTR 15.0%
!!! AAAAAAAATTGTTACTTTTG+TGG - chr8_3:5270642-5270661 Msa1271820:intron 15.0%
!!! ACTTTCATTTATTATTTCTT+AGG - chr8_3:5271444-5271463 Msa1271820:intron 15.0%
!! GCTATTTATAACATTATATT+TGG - chr8_3:5272874-5272893 Msa1271820:CDS 15.0%
!!! ATTTTATTATTACATTCAAG+AGG - chr8_3:5273819-5273838 Msa1271820:intron 15.0%
!!! TTTTATTATTACATTCAAGA+GGG - chr8_3:5273820-5273839 Msa1271820:intron 15.0%
!!! TAAATTTTTGAGAGAGAATT+GGG + chr8_3:5268105-5268124 None:intergenic 20.0%
!! AATTCTCTCTCAAAAATTTA+GGG - chr8_3:5268105-5268124 Msa1271820:three_prime_UTR 20.0%
!!! AAATTGTTTATGGATTATTG+GGG - chr8_3:5268644-5268663 Msa1271820:three_prime_UTR 20.0%
!!! AAATTTTAAGGGTTTGAATA+TGG - chr8_3:5268673-5268692 Msa1271820:three_prime_UTR 20.0%
!!! AGTTTATATTGTTTTGTTGT+AGG - chr8_3:5268734-5268753 Msa1271820:three_prime_UTR 20.0%
!! TATAATTCATCATTAGATGA+AGG - chr8_3:5268808-5268827 Msa1271820:three_prime_UTR 20.0%
!!! AAAGAATTTGAAGTATTTGT+TGG - chr8_3:5269643-5269662 Msa1271820:three_prime_UTR 20.0%
!!! AAGAATTTGAAGTATTTGTT+GGG - chr8_3:5269644-5269663 Msa1271820:three_prime_UTR 20.0%
!!! TTTTTTGAAGGTTTTTTAAG+CGG - chr8_3:5270415-5270434 Msa1271820:intron 20.0%
!! AAAATTTGATCAGTAAAATG+AGG + chr8_3:5270801-5270820 None:intergenic 20.0%
!!! GATCAAATTTTTCAAATTTC+AGG - chr8_3:5270810-5270829 Msa1271820:CDS 20.0%
!! TGTATAACAAAAAATGAGAT+CGG + chr8_3:5271883-5271902 None:intergenic 20.0%
!! AAAATGTAAGAATGAATTAC+AGG + chr8_3:5272127-5272146 None:intergenic 20.0%
!!! AGTCAAAAGATGATTTTATT+TGG - chr8_3:5273340-5273359 Msa1271820:intron 20.0%
!!! GTCAAAAGATGATTTTATTT+GGG - chr8_3:5273341-5273360 Msa1271820:intron 20.0%
!! AAATAATTACTATGCGAAAT+CGG + chr8_3:5273547-5273566 None:intergenic 20.0%
!! TGAAAATAAAGTAACAGAAA+AGG - chr8_3:5273668-5273687 Msa1271820:intron 20.0%
!! CTATATGAATACACTATTTA+TGG + chr8_3:5273949-5273968 None:intergenic 20.0%
!! TAAAATGAATACTTATGCAT+AGG + chr8_3:5274100-5274119 None:intergenic 20.0%
!!! CTAAATTTTTGAGAGAGAAT+TGG + chr8_3:5268106-5268125 None:intergenic 25.0%
! CAATTCTCTCTCAAAAATTT+AGG - chr8_3:5268104-5268123 Msa1271820:three_prime_UTR 25.0%
!!! TTGGGGTTTTTGAAATTTTA+AGG - chr8_3:5268661-5268680 Msa1271820:three_prime_UTR 25.0%
!!! TGGGGTTTTTGAAATTTTAA+GGG - chr8_3:5268662-5268681 Msa1271820:three_prime_UTR 25.0%
!!! TATTGTTTTGTTGTAGGAAA+AGG - chr8_3:5268740-5268759 Msa1271820:three_prime_UTR 25.0%
!! TGTTATCGCTTCTTTTATTA+TGG - chr8_3:5268862-5268881 Msa1271820:three_prime_UTR 25.0%
! TTATGTGTTTGTGTTATGTT+TGG - chr8_3:5268976-5268995 Msa1271820:three_prime_UTR 25.0%
!!! AATCATGAAGTGGTTTTAAA+TGG - chr8_3:5269006-5269025 Msa1271820:three_prime_UTR 25.0%
!!! ATCATGAAGTGGTTTTAAAT+GGG - chr8_3:5269007-5269026 Msa1271820:three_prime_UTR 25.0%
! AAAATAGTACAGGTTTCAAT+TGG + chr8_3:5269260-5269279 None:intergenic 25.0%
!! AGAATTTGAAGTATTTGTTG+GGG - chr8_3:5269645-5269664 Msa1271820:three_prime_UTR 25.0%
! AAATGTTGAGGATATAACTT+TGG - chr8_3:5270178-5270197 Msa1271820:intron 25.0%
! GTAGAAGATTCTAATGATAA+AGG - chr8_3:5270200-5270219 Msa1271820:intron 25.0%
!! TTTTCTGAATAGAAATTCCT+TGG - chr8_3:5270390-5270409 Msa1271820:intron 25.0%
! TTTCTGAATAGAAATTCCTT+GGG - chr8_3:5270391-5270410 Msa1271820:intron 25.0%
!! AGTTTGAAATTGTAATCATG+TGG - chr8_3:5270550-5270569 Msa1271820:CDS 25.0%
!! GTTTGAAATTGTAATCATGT+GGG - chr8_3:5270551-5270570 Msa1271820:CDS 25.0%
! TGTAAAAACTGGAAAATTGT+GGG + chr8_3:5270586-5270605 None:intergenic 25.0%
! ATGTAAAAACTGGAAAATTG+TGG + chr8_3:5270587-5270606 None:intergenic 25.0%
! TTTCTCATCCTAAAATATAC+CGG + chr8_3:5270736-5270755 None:intergenic 25.0%
! TGAATTACAGGACAAAAAAT+AGG + chr8_3:5272115-5272134 None:intergenic 25.0%
!!! TACATTTTGATTTGTAGAGT+CGG - chr8_3:5272139-5272158 Msa1271820:intron 25.0%
!! TTTATTATGTTTTTCCGATC+AGG - chr8_3:5272325-5272344 Msa1271820:CDS 25.0%
! TCATATTCATCAATGTATTC+TGG - chr8_3:5272521-5272540 Msa1271820:CDS 25.0%
! ATGTTATGAAGCTTACAATT+TGG - chr8_3:5272836-5272855 Msa1271820:CDS 25.0%
! GTTATTGAATTTGTGATGTA+TGG - chr8_3:5272969-5272988 Msa1271820:CDS 25.0%
! ACAAATGGTATCATAAATCA+AGG + chr8_3:5273050-5273069 None:intergenic 25.0%
! TTGATTTATGATACCATTTG+TGG - chr8_3:5273049-5273068 Msa1271820:CDS 25.0%
! TGATTTATGATACCATTTGT+GGG - chr8_3:5273050-5273069 Msa1271820:CDS 25.0%
! AAAGAGATGTTTAGTTACTT+TGG - chr8_3:5273219-5273238 Msa1271820:CDS 25.0%
! AGTAATAAGAATACTACTTC+AGG - chr8_3:5273308-5273327 Msa1271820:intron 25.0%
!!! ATCATGCTTTTTACTTTCTT+AGG + chr8_3:5273404-5273423 None:intergenic 25.0%
! AATAATTACTATGCGAAATC+GGG + chr8_3:5273546-5273565 None:intergenic 25.0%
! ATTGACAAAGAAATCACAAA+TGG - chr8_3:5273785-5273804 Msa1271820:intron 25.0%
! TGAATACACTATTTATGGTA+GGG + chr8_3:5273944-5273963 None:intergenic 25.0%
! ATGAATACACTATTTATGGT+AGG + chr8_3:5273945-5273964 None:intergenic 25.0%
! TCATATAGTATACATCTTGA+AGG - chr8_3:5273961-5273980 Msa1271820:intron 25.0%
!! ATTCATTTTATTGCATCTTG+TGG - chr8_3:5274110-5274129 Msa1271820:CDS 25.0%
TTAAATTATGGCGAAAAGTG+AGG - chr8_3:5268534-5268553 Msa1271820:three_prime_UTR 30.0%
TGAAATTATAGCGAAAAGTG+AGG - chr8_3:5268575-5268594 Msa1271820:three_prime_UTR 30.0%
GGGGTTGTTTAAATTGTTTA+TGG - chr8_3:5268634-5268653 Msa1271820:three_prime_UTR 30.0%
TATGGTTGTTGCAATTGAAT+AGG - chr8_3:5268880-5268899 Msa1271820:three_prime_UTR 30.0%
! ATGTTGTCAAATATTGGTTG+TGG - chr8_3:5269044-5269063 Msa1271820:three_prime_UTR 30.0%
! CATAGCAAAAGAAGGATTTT+AGG - chr8_3:5269119-5269138 Msa1271820:three_prime_UTR 30.0%
ATCCACAACAATGTTATCAA+TGG + chr8_3:5269152-5269171 None:intergenic 30.0%
CATTGTGCAATGATTGAATA+TGG - chr8_3:5269173-5269192 Msa1271820:three_prime_UTR 30.0%
!!! AAAGTTAAGTCTGTTTTGAC+TGG - chr8_3:5269232-5269251 Msa1271820:three_prime_UTR 30.0%
!!! AAGTTAAGTCTGTTTTGACT+GGG - chr8_3:5269233-5269252 Msa1271820:three_prime_UTR 30.0%
CTTCTGTCAAAAAATAGTAC+AGG + chr8_3:5269270-5269289 None:intergenic 30.0%
!!! TTTTTTGACAGAAGATGAAG+AGG - chr8_3:5269276-5269295 Msa1271820:three_prime_UTR 30.0%
! GAATTTGAAGTATTTGTTGG+GGG - chr8_3:5269646-5269665 Msa1271820:three_prime_UTR 30.0%
TGACTTCTCAATAATAGAGT+AGG - chr8_3:5269855-5269874 Msa1271820:intron 30.0%
CAGATTAATGGAAAACAATG+TGG - chr8_3:5269932-5269951 Msa1271820:intron 30.0%
GCTGAATTTATGACTGTTAA+TGG - chr8_3:5270108-5270127 Msa1271820:intron 30.0%
TTATGGAGTTACAAATGTTG+AGG - chr8_3:5270166-5270185 Msa1271820:CDS 30.0%
!!! AATTCCTTGGGTTTTTTTGA+AGG - chr8_3:5270403-5270422 Msa1271820:intron 30.0%
AAAACCTTCAAAAAAACCCA+AGG + chr8_3:5270410-5270429 None:intergenic 30.0%
CATATTTCTTCAGAAGATTC+CGG + chr8_3:5270888-5270907 None:intergenic 30.0%
TAATGCTTTCATCTTCTTTC+AGG - chr8_3:5271105-5271124 Msa1271820:intron 30.0%
ATAGAGAATCATAATCACGA+GGG + chr8_3:5271783-5271802 None:intergenic 30.0%
CAGGACAAAAAATAGGATTA+GGG + chr8_3:5272108-5272127 None:intergenic 30.0%
ACAGGACAAAAAATAGGATT+AGG + chr8_3:5272109-5272128 None:intergenic 30.0%
ATTCATCAATGTATTCTGGT+AGG - chr8_3:5272525-5272544 Msa1271820:CDS 30.0%
TTCATCAATGTATTCTGGTA+GGG - chr8_3:5272526-5272545 Msa1271820:CDS 30.0%
TGTGCTTTGTGTATTACATT+AGG - chr8_3:5272633-5272652 Msa1271820:intron 30.0%
! TGTAAGTGGATGTATTTTTC+TGG - chr8_3:5272666-5272685 Msa1271820:intron 30.0%
!! AGATTTTGCTATACTCGAAA+TGG - chr8_3:5272689-5272708 Msa1271820:intron 30.0%
ACAGATCCGACATAATAAAT+TGG - chr8_3:5272780-5272799 Msa1271820:CDS 30.0%
TTGCAGCCAATTTATTATGT+CGG + chr8_3:5272789-5272808 None:intergenic 30.0%
CATAATAAATTGGCTGCAAT+AGG - chr8_3:5272790-5272809 Msa1271820:CDS 30.0%
ATAACATCCATAAGCTTCAA+AGG + chr8_3:5272823-5272842 None:intergenic 30.0%
CTTGTTTGGTTAAGGATTAA+TGG - chr8_3:5273145-5273164 Msa1271820:CDS 30.0%
!! TGATTTTATTTGGGATGTGT+TGG - chr8_3:5273350-5273369 Msa1271820:intron 30.0%
TTTCATATTCACTTGAGTGA+TGG + chr8_3:5273653-5273672 None:intergenic 30.0%
TTTCTAAATCAAGCTAGGTA+GGG + chr8_3:5273732-5273751 None:intergenic 30.0%
! TTTTCTAAATCAAGCTAGGT+AGG + chr8_3:5273733-5273752 None:intergenic 30.0%
TAGCTTGATTTAGAAAAGCT+CGG - chr8_3:5273736-5273755 Msa1271820:intron 30.0%
GCAAATGAACCAACATAAAT+CGG - chr8_3:5273760-5273779 Msa1271820:intron 30.0%
TATAGTATACATCTTGAAGG+AGG - chr8_3:5273964-5273983 Msa1271820:intron 30.0%
TTAAGAAGATATTGCTCGTT+AGG - chr8_3:5273996-5274015 Msa1271820:intron 30.0%
TGTTAGGTAACATACCTATA+TGG - chr8_3:5274267-5274286 Msa1271820:CDS 30.0%
GTGAACAGTTATATCCATAT+AGG + chr8_3:5274284-5274303 None:intergenic 30.0%
CGTTCATATATGCATATGAA+TGG - chr8_3:5274328-5274347 Msa1271820:exon 30.0%
TCCGATCCACAAAGAAATTT+AGG - chr8_3:5268160-5268179 Msa1271820:three_prime_UTR 35.0%
CCCTAAATTTCTTTGTGGAT+CGG + chr8_3:5268164-5268183 None:intergenic 35.0%
CCGATCCACAAAGAAATTTA+GGG - chr8_3:5268161-5268180 Msa1271820:three_prime_UTR 35.0%
CGAAACCCTAAATTTCTTTG+TGG + chr8_3:5268169-5268188 None:intergenic 35.0%
!! ATAGCTTTATCTTCAACGAC+AGG + chr8_3:5268412-5268431 None:intergenic 35.0%
TATGAATCAAATTGCTCCTG+AGG - chr8_3:5268435-5268454 Msa1271820:three_prime_UTR 35.0%
AGCGATAACAGCTTACAAAA+AGG + chr8_3:5268852-5268871 None:intergenic 35.0%
TGGTGATATCAATCATGAAG+TGG - chr8_3:5268996-5269015 Msa1271820:three_prime_UTR 35.0%
!!! GGTTTTAAATGGGAATCATG+TGG - chr8_3:5269017-5269036 Msa1271820:three_prime_UTR 35.0%
GGATCGATGTTGTCAAATAT+TGG - chr8_3:5269038-5269057 Msa1271820:three_prime_UTR 35.0%
! ATATTGGTTGTGGCAGATTT+CGG - chr8_3:5269054-5269073 Msa1271820:three_prime_UTR 35.0%
CACAACAATGTTATCAATGG+CGG + chr8_3:5269149-5269168 None:intergenic 35.0%
TGATGAGAAGGAAATTGAAC+AGG - chr8_3:5269399-5269418 Msa1271820:three_prime_UTR 35.0%
AAGGAAATTGAACAGGAAGA+GGG - chr8_3:5269406-5269425 Msa1271820:three_prime_UTR 35.0%
GAAGAACCTGAAGAAAATGT+TGG - chr8_3:5269454-5269473 Msa1271820:three_prime_UTR 35.0%
! TCTTCACCAACATTTTCTTC+AGG + chr8_3:5269463-5269482 None:intergenic 35.0%
! GAAGAAAATGTTGGTGAAGA+AGG - chr8_3:5269463-5269482 Msa1271820:three_prime_UTR 35.0%
AGATGGTCATGATGAAATTG+AGG - chr8_3:5269510-5269529 Msa1271820:three_prime_UTR 35.0%
GATGGTCATGATGAAATTGA+GGG - chr8_3:5269511-5269530 Msa1271820:three_prime_UTR 35.0%
TCCTCAGACAAAAAAGAACA+AGG - chr8_3:5269753-5269772 Msa1271820:intron 35.0%
CCTCAGACAAAAAAGAACAA+GGG - chr8_3:5269754-5269773 Msa1271820:intron 35.0%
ATTCTTGCGGTTTGAAAATG+TGG - chr8_3:5269783-5269802 Msa1271820:intron 35.0%
AGAAGTCAAAGATTACCACT+GGG + chr8_3:5269843-5269862 None:intergenic 35.0%
TCGCTGCAATTTCAGATTAA+TGG - chr8_3:5269920-5269939 Msa1271820:intron 35.0%
GCATATGTTTCCCAAATAGA+GGG + chr8_3:5269984-5270003 None:intergenic 35.0%
TGCATATGTTTCCCAAATAG+AGG + chr8_3:5269985-5270004 None:intergenic 35.0%
TGGGAAACATATGCAAAACA+TGG - chr8_3:5269990-5270009 Msa1271820:CDS 35.0%
CATATGCAAAACATGGACAA+AGG - chr8_3:5269997-5270016 Msa1271820:CDS 35.0%
! AGCTGTAAGTCTAGTTGTTT+TGG - chr8_3:5270021-5270040 Msa1271820:intron 35.0%
! TCAATGAAGGTGCAAAAAAC+AGG + chr8_3:5270048-5270067 None:intergenic 35.0%
TTGCACCTTCATTGAATTGT+TGG - chr8_3:5270053-5270072 Msa1271820:intron 35.0%
TGCACCTTCATTGAATTGTT+GGG - chr8_3:5270054-5270073 Msa1271820:intron 35.0%
ACAACCCAACAATTCAATGA+AGG + chr8_3:5270061-5270080 None:intergenic 35.0%
TCATAAATTCAGCAGAGTTC+AGG + chr8_3:5270101-5270120 None:intergenic 35.0%
ATGACTGTTAATGGAACTTC+TGG - chr8_3:5270117-5270136 Msa1271820:intron 35.0%
! AAGGAGAAGTTGAAGCATTA+TGG - chr8_3:5270149-5270168 Msa1271820:CDS 35.0%
AATGATAAAGGAACAAACCG+TGG - chr8_3:5270212-5270231 Msa1271820:intron 35.0%
ATTCCAAGAATGCAAATCCA+CGG + chr8_3:5270232-5270251 None:intergenic 35.0%
! TGCAGATTCTTTTATTGACC+CGG - chr8_3:5270343-5270362 Msa1271820:CDS 35.0%
TGTGACATAATTTCATCACC+CGG + chr8_3:5270365-5270384 None:intergenic 35.0%
CAAAATTAACCAACCACTGA+TGG + chr8_3:5270480-5270499 None:intergenic 35.0%
!! CAGTGGTTGGTTAATTTTGT+TGG - chr8_3:5270481-5270500 Msa1271820:CDS 35.0%
CACATCACGAATGTAAAAAC+TGG + chr8_3:5270597-5270616 None:intergenic 35.0%
! CAGTTTTTACATTCGTGATG+TGG - chr8_3:5270595-5270614 Msa1271820:intron 35.0%
! ATGACACACCGGTATATTTT+AGG - chr8_3:5270725-5270744 Msa1271820:CDS 35.0%
ATGAGAAACTATCCTTCTAG+TGG - chr8_3:5270748-5270767 Msa1271820:CDS 35.0%
GGAATAAATACATCTACACC+TGG + chr8_3:5270780-5270799 None:intergenic 35.0%
ACATAATCTTCATCCCATGA+AGG + chr8_3:5270865-5270884 None:intergenic 35.0%
! CGGAATCTTCTGAAGAAATA+TGG - chr8_3:5270886-5270905 Msa1271820:CDS 35.0%
TTGAAAAGATTGAGCTTGCA+AGG - chr8_3:5270914-5270933 Msa1271820:CDS 35.0%
!! GACTATGGATTTGTTACCTT+TGG - chr8_3:5270961-5270980 Msa1271820:CDS 35.0%
AGCATTACTGGTACAGAATT+GGG - chr8_3:5271015-5271034 Msa1271820:CDS 35.0%
TAACTGGTATAGACATGACA+GGG + chr8_3:5271342-5271361 None:intergenic 35.0%
TGTCTATACCAGTTAGAAGT+AGG - chr8_3:5271347-5271366 Msa1271820:CDS 35.0%
CTTCTATCATAAGATCTAGC+TGG + chr8_3:5271385-5271404 None:intergenic 35.0%
GTGGATAATCCCTATAAGTT+GGG + chr8_3:5271615-5271634 None:intergenic 35.0%
GATAGAGAATCATAATCACG+AGG + chr8_3:5271784-5271803 None:intergenic 35.0%
CGTGATTATGATTCTCTATC+TGG - chr8_3:5271784-5271803 Msa1271820:intron 35.0%
TGCAGAAATAGTACTAACCA+CGG + chr8_3:5271830-5271849 None:intergenic 35.0%
!!! TTTGTTTTTTATGCCCAACC+AGG - chr8_3:5271933-5271952 Msa1271820:intron 35.0%
CTTGACCAGAAATAGAACTT+CGG + chr8_3:5272195-5272214 None:intergenic 35.0%
!! ATTTCTGGTCAAGATTCACA+TGG - chr8_3:5272202-5272221 Msa1271820:CDS 35.0%
! TTTCTGGTCAAGATTCACAT+GGG - chr8_3:5272203-5272222 Msa1271820:CDS 35.0%
ATGTACTCATCAAGTTATGG+CGG - chr8_3:5272376-5272395 Msa1271820:CDS 35.0%
ATCTATTGTTCCTGTGATGT+AGG - chr8_3:5272487-5272506 Msa1271820:intron 35.0%
TCATCAATGTATTCTGGTAG+GGG - chr8_3:5272527-5272546 Msa1271820:CDS 35.0%
! CATCTCTTATCTTTTCGCAA+GGG - chr8_3:5272712-5272731 Msa1271820:CDS 35.0%
CTGTTCATAGACAAATTCAC+TGG + chr8_3:5272764-5272783 None:intergenic 35.0%
CTTGTCAATTCAAGCTATCT+CGG - chr8_3:5272919-5272938 Msa1271820:CDS 35.0%
TTGTCAATTCAAGCTATCTC+GGG - chr8_3:5272920-5272939 Msa1271820:CDS 35.0%
TTTATGATACCATTTGTGGG+TGG - chr8_3:5273053-5273072 Msa1271820:CDS 35.0%
TAACATTATCCACCCACAAA+TGG + chr8_3:5273065-5273084 None:intergenic 35.0%
TGCTCCAATACCATTTCATT+TGG - chr8_3:5273097-5273116 Msa1271820:CDS 35.0%
CTGTCCAAATGAAATGGTAT+TGG + chr8_3:5273104-5273123 None:intergenic 35.0%
! AGATGCTACTTGTTTGGTTA+AGG - chr8_3:5273137-5273156 Msa1271820:CDS 35.0%
TCTGCTGAATGTATCAAAGT+TGG - chr8_3:5273176-5273195 Msa1271820:CDS 35.0%
! GAACTGATAATATTTGCTGC+TGG - chr8_3:5273424-5273443 Msa1271820:intron 35.0%
!! TACTTTGAGTTTTTGTCCTG+AGG - chr8_3:5273457-5273476 Msa1271820:intron 35.0%
AAACTATGCAGGTTACTAGA+TGG + chr8_3:5273523-5273542 None:intergenic 35.0%
! TTTAGCTTCTGCATTGTAGT+GGG - chr8_3:5273622-5273641 Msa1271820:intron 35.0%
! GAGCTTTTCTAAATCAAGCT+AGG + chr8_3:5273737-5273756 None:intergenic 35.0%
AGCTTGATTTAGAAAAGCTC+GGG - chr8_3:5273737-5273756 Msa1271820:intron 35.0%
! TGTCAATGACCGATTTATGT+TGG + chr8_3:5273772-5273791 None:intergenic 35.0%
CTCAACATTGCTCAGAAATA+GGG + chr8_3:5274053-5274072 None:intergenic 35.0%
ACTCAACATTGCTCAGAAAT+AGG + chr8_3:5274054-5274073 None:intergenic 35.0%
ATTAATATATTCACTGGGCG+TGG - chr8_3:5274155-5274174 Msa1271820:CDS 35.0%
TTAATATATTCACTGGGCGT+GGG - chr8_3:5274156-5274175 Msa1271820:CDS 35.0%
!! ACTCTAGTTTAGCTCTTGTT+AGG - chr8_3:5274302-5274321 Msa1271820:CDS 35.0%
TGAACCTGTTGAAGAGAAGA+CGG - chr8_3:5268315-5268334 Msa1271820:three_prime_UTR 40.0%
GGTGATTGAAGAAGAGATCA+AGG - chr8_3:5268336-5268355 Msa1271820:three_prime_UTR 40.0%
AGAAGAGAATCTCGTTGTTG+AGG - chr8_3:5268360-5268379 Msa1271820:three_prime_UTR 40.0%
! CGCCATTGATAACATTGTTG+TGG - chr8_3:5269147-5269166 Msa1271820:three_prime_UTR 40.0%
TTTGACAGAAGATGAAGAGG+AGG - chr8_3:5269279-5269298 Msa1271820:three_prime_UTR 40.0%
AGAAGATGAAGAGGAGGTTA+AGG - chr8_3:5269285-5269304 Msa1271820:three_prime_UTR 40.0%
GAAGGAAATTGAACAGGAAG+AGG - chr8_3:5269405-5269424 Msa1271820:three_prime_UTR 40.0%
TGATGAAATTGAGGGAGAAG+AGG - chr8_3:5269519-5269538 Msa1271820:three_prime_UTR 40.0%
ATGCTACTGAAGATGATCTG+AGG - chr8_3:5269680-5269699 Msa1271820:three_prime_UTR 40.0%
TACTGAAGATGATCTGAGGA+AGG - chr8_3:5269684-5269703 Msa1271820:three_prime_UTR 40.0%
! GATGATCTGAGGAAGGTTTT+CGG - chr8_3:5269691-5269710 Msa1271820:three_prime_UTR 40.0%
!!! CCCTTGTTCTTTTTTGTCTG+AGG + chr8_3:5269757-5269776 None:intergenic 40.0%
ACAAGGGATTTGCATTCTTG+CGG - chr8_3:5269770-5269789 Msa1271820:intron 40.0%
GAGAAGTCAAAGATTACCAC+TGG + chr8_3:5269844-5269863 None:intergenic 40.0%
GACAGTGATACCCTCTATTT+GGG - chr8_3:5269971-5269990 Msa1271820:CDS 40.0%
GCTTCAACTTCTCCTTTAAC+TGG + chr8_3:5270145-5270164 None:intergenic 40.0%
AAACCGTGGATTTGCATTCT+TGG - chr8_3:5270226-5270245 Msa1271820:intron 40.0%
! CTTTAAGAGACTGCAGAAGA+GGG - chr8_3:5270280-5270299 Msa1271820:CDS 40.0%
TCTGCAAATGAAACCTTTGC+AGG + chr8_3:5270329-5270348 None:intergenic 40.0%
! GCAGATTCTTTTATTGACCC+GGG - chr8_3:5270344-5270363 Msa1271820:CDS 40.0%
GTGACATAATTTCATCACCC+GGG + chr8_3:5270364-5270383 None:intergenic 40.0%
GGGTGATGAAATTATGTCAC+AGG - chr8_3:5270364-5270383 Msa1271820:CDS 40.0%
TAAGCGGAACATGTGTAGAA+TGG - chr8_3:5270431-5270450 Msa1271820:intron 40.0%
ATGAGTTCCAATACCATCAG+TGG - chr8_3:5270464-5270483 Msa1271820:intron 40.0%
TAACCAACCACTGATGGTAT+TGG + chr8_3:5270474-5270493 None:intergenic 40.0%
GAAACTATCCTTCTAGTGGT+TGG - chr8_3:5270752-5270771 Msa1271820:CDS 40.0%
TAATCTTCATCCCATGAAGG+AGG + chr8_3:5270862-5270881 None:intergenic 40.0%
CATGGGATGAAGATTATGTC+CGG - chr8_3:5270866-5270885 Msa1271820:CDS 40.0%
! TCTTCTGAAGAAATATGGCG+AGG - chr8_3:5270891-5270910 Msa1271820:CDS 40.0%
CAGCATTACTGGTACAGAAT+TGG - chr8_3:5271014-5271033 Msa1271820:CDS 40.0%
ATTGGGTGAAGGTGACAAAA+AGG - chr8_3:5271032-5271051 Msa1271820:intron 40.0%
AATATCTGCGCAGTGAAACA+TGG - chr8_3:5271075-5271094 Msa1271820:intron 40.0%
CAATAATGTCAAGGCCTTCT+TGG - chr8_3:5271218-5271237 Msa1271820:CDS 40.0%
CTAACTGGTATAGACATGAC+AGG + chr8_3:5271343-5271362 None:intergenic 40.0%
CTATCATAAGATCTAGCTGG+AGG + chr8_3:5271382-5271401 None:intergenic 40.0%
TCTTATGATAGAAGACCAGC+TGG - chr8_3:5271391-5271410 Msa1271820:CDS 40.0%
ATTGTACACTACATACCAGC+TGG + chr8_3:5271409-5271428 None:intergenic 40.0%
GCAGCATCTAGAAGACAATA+TGG + chr8_3:5271484-5271503 None:intergenic 40.0%
AGCAGTGTGAAGAGAGATTA+TGG - chr8_3:5271514-5271533 Msa1271820:CDS 40.0%
GTGTGAAGAGAGATTATGGT+CGG - chr8_3:5271518-5271537 Msa1271820:CDS 40.0%
AGTAGAGTTGCTGCAGATTA+TGG - chr8_3:5271565-5271584 Msa1271820:CDS 40.0%
TTGCTGCAGATTATGGATCA+AGG - chr8_3:5271572-5271591 Msa1271820:CDS 40.0%
TGAAAGACGCCCAACTTATA+GGG - chr8_3:5271603-5271622 Msa1271820:CDS 40.0%
GGTGGATAATCCCTATAAGT+TGG + chr8_3:5271616-5271635 None:intergenic 40.0%
TCCTTCACGATAACTTGGAT+GGG + chr8_3:5271758-5271777 None:intergenic 40.0%
AATGAGATCGGAAACAATGC+AGG + chr8_3:5271871-5271890 None:intergenic 40.0%
!! GGAAGATCTAGTCTTGGATA+TGG - chr8_3:5272160-5272179 Msa1271820:CDS 40.0%
!! TCTAGTCTTGGATATGGTAG+TGG - chr8_3:5272166-5272185 Msa1271820:CDS 40.0%
TTCTGGTCAAGATTCACATG+GGG - chr8_3:5272204-5272223 Msa1271820:CDS 40.0%
! TTTTTCCGATCAGGCTCTTA+TGG - chr8_3:5272334-5272353 Msa1271820:CDS 40.0%
TCTTATGGCGGTAATGATGT+TGG - chr8_3:5272349-5272368 Msa1271820:CDS 40.0%
GGCATGTACTCATCAAGTTA+TGG - chr8_3:5272373-5272392 Msa1271820:CDS 40.0%
ATTGTTCCTGTGATGTAGGT+TGG - chr8_3:5272491-5272510 Msa1271820:intron 40.0%
GGTTCGGGATCTTATTATTG+AGG - chr8_3:5272584-5272603 Msa1271820:CDS 40.0%
TAGGATGCATTCAGTGTAAG+TGG - chr8_3:5272652-5272671 Msa1271820:intron 40.0%
! GCATCTCTTATCTTTTCGCA+AGG - chr8_3:5272711-5272730 Msa1271820:CDS 40.0%
! TCTTATCTTTTCGCAAGGGA+TGG - chr8_3:5272716-5272735 Msa1271820:CDS 40.0%
AATTGGCTGCAATAGGATGA+CGG - chr8_3:5272797-5272816 Msa1271820:CDS 40.0%
GGGAACTTGTCGCAAAAATT+AGG - chr8_3:5272895-5272914 Msa1271820:CDS 40.0%
TGGTCTCTGTCCAAATGAAA+TGG + chr8_3:5273110-5273129 None:intergenic 40.0%
TTTCATTTGGACAGAGACCA+AGG - chr8_3:5273110-5273129 Msa1271820:CDS 40.0%
GTGTTGTAGGATTTGTGACA+TGG - chr8_3:5273372-5273391 Msa1271820:intron 40.0%
!! TTTGAGTTTTTGTCCTGAGG+TGG - chr8_3:5273460-5273479 Msa1271820:intron 40.0%
TGCAGAAGCTAAAGATTCTG+TGG + chr8_3:5273615-5273634 None:intergenic 40.0%
! CTTTAGCTTCTGCATTGTAG+TGG - chr8_3:5273621-5273640 Msa1271820:intron 40.0%
TAAATCAAGCTAGGTAGGGT+GGG + chr8_3:5273728-5273747 None:intergenic 40.0%
GCTTGATTTAGAAAAGCTCG+GGG - chr8_3:5273738-5273757 Msa1271820:intron 40.0%
CTCAAGACAACCAACAATGT+GGG + chr8_3:5273863-5273882 None:intergenic 40.0%
ACTCAAGACAACCAACAATG+TGG + chr8_3:5273864-5273883 None:intergenic 40.0%
AGACAACCAACGATATGGTT+CGG + chr8_3:5273908-5273927 None:intergenic 40.0%
ACTCAAGACAACCAACGATA+TGG + chr8_3:5273913-5273932 None:intergenic 40.0%
AGTATACATCTTGAAGGAGG+AGG - chr8_3:5273967-5273986 Msa1271820:intron 40.0%
!! GTCTTCGGAGGCATTGTTAT+TGG + chr8_3:5268199-5268218 None:intergenic 45.0%
ATCACCGTCTTCTCTTCAAC+AGG + chr8_3:5268322-5268341 None:intergenic 45.0%
CGTTGTTGAGGAAAAACCTG+TGG - chr8_3:5268372-5268391 Msa1271820:three_prime_UTR 45.0%
TGTTGAGGAAAAACCTGTGG+TGG - chr8_3:5268375-5268394 Msa1271820:three_prime_UTR 45.0%
GGATTATCTTCTTCCACCAC+AGG + chr8_3:5268391-5268410 None:intergenic 45.0%
TTAGCATCTTCTACAGCCTC+AGG + chr8_3:5268454-5268473 None:intergenic 45.0%
AGTTTCTTTGACAACCGCCA+TGG - chr8_3:5269081-5269100 Msa1271820:three_prime_UTR 45.0%
!!! CAACCGCCATGGTGTTTTTT+TGG - chr8_3:5269092-5269111 Msa1271820:three_prime_UTR 45.0%
TGTCCGCCAAAAAAACACCA+TGG + chr8_3:5269101-5269120 None:intergenic 45.0%
! TTGGCGGACATAGCAAAAGA+AGG - chr8_3:5269111-5269130 Msa1271820:three_prime_UTR 45.0%
TGATCCTGAGTATGAACCTG+AGG - chr8_3:5269357-5269376 Msa1271820:three_prime_UTR 45.0%
TACTCCTCAGGTTCATACTC+AGG + chr8_3:5269364-5269383 None:intergenic 45.0%
GAGTATGAACCTGAGGAGTA+TGG - chr8_3:5269364-5269383 Msa1271820:three_prime_UTR 45.0%
! TATGAACCTGAGGAGTATGG+TGG - chr8_3:5269367-5269386 Msa1271820:three_prime_UTR 45.0%
! ATGAACCTGAGGAGTATGGT+GGG - chr8_3:5269368-5269387 Msa1271820:three_prime_UTR 45.0%
TGGGGTTGACTATGATGAGA+AGG - chr8_3:5269387-5269406 Msa1271820:three_prime_UTR 45.0%
! GTTGGTGAAGAAGGTGATTC+AGG - chr8_3:5269472-5269491 Msa1271820:three_prime_UTR 45.0%
GGAACATCGTGAAGTTGTGA+AGG - chr8_3:5269606-5269625 Msa1271820:three_prime_UTR 45.0%
ATCGTGAAGTTGTGAAGGAG+AGG - chr8_3:5269611-5269630 Msa1271820:three_prime_UTR 45.0%
CTTCAGTAGCATCCTTGTCT+AGG + chr8_3:5269672-5269691 None:intergenic 45.0%
! AGGAAGGTTTTCGGTGAAGT+TGG - chr8_3:5269700-5269719 Msa1271820:three_prime_UTR 45.0%
! GGAAGGTTTTCGGTGAAGTT+GGG - chr8_3:5269701-5269720 Msa1271820:three_prime_UTR 45.0%
! GAAGGTTTTCGGTGAAGTTG+GGG - chr8_3:5269702-5269721 Msa1271820:three_prime_UTR 45.0%
AGCAGAGCTTAAAAACCCAG+TGG - chr8_3:5269825-5269844 Msa1271820:intron 45.0%
GGACAGTGATACCCTCTATT+TGG - chr8_3:5269970-5269989 Msa1271820:CDS 45.0%
! GAACTTCTGGTGCCAGTTAA+AGG - chr8_3:5270130-5270149 Msa1271820:CDS 45.0%
CCTCTTCTGCAGTCTCTTAA+AGG + chr8_3:5270282-5270301 None:intergenic 45.0%
! CCTTTAAGAGACTGCAGAAG+AGG - chr8_3:5270279-5270298 Msa1271820:CDS 45.0%
CAGAAGAGGGATGTTACGTT+TGG - chr8_3:5270293-5270312 Msa1271820:CDS 45.0%
!! TGGAGTTGATAAGCCTGCAA+AGG - chr8_3:5270313-5270332 Msa1271820:CDS 45.0%
GTTCCAATACCATCAGTGGT+TGG - chr8_3:5270468-5270487 Msa1271820:intron 45.0%
TTGATGCACTTCCTCCTTCA+TGG - chr8_3:5270848-5270867 Msa1271820:CDS 45.0%
TGATGCACTTCCTCCTTCAT+GGG - chr8_3:5270849-5270868 Msa1271820:CDS 45.0%
! AGATGTGCTGACAGCATTAC+TGG - chr8_3:5271003-5271022 Msa1271820:CDS 45.0%
ACTGGTACAGAATTGGGTGA+AGG - chr8_3:5271021-5271040 Msa1271820:CDS 45.0%
TCTTCTTTCAGGCCAAAGTG+AGG - chr8_3:5271116-5271135 Msa1271820:intron 45.0%
CTTCTTTCAGGCCAAAGTGA+GGG - chr8_3:5271117-5271136 Msa1271820:intron 45.0%
TGATAACCTAGCCCTCACTT+TGG + chr8_3:5271131-5271150 None:intergenic 45.0%
AAGTGAGGGCTAGGTTATCA+AGG - chr8_3:5271131-5271150 Msa1271820:CDS 45.0%
TTATCAAGGCCACTTCAGAG+AGG - chr8_3:5271145-5271164 Msa1271820:CDS 45.0%
! CACGACCAACATGTTTTCCT+CGG + chr8_3:5271171-5271190 None:intergenic 45.0%
GAGGAAAACATGTTGGTCGT+GGG - chr8_3:5271170-5271189 Msa1271820:CDS 45.0%
AGGAAAACATGTTGGTCGTG+GGG - chr8_3:5271171-5271190 Msa1271820:CDS 45.0%
ATTATTGCAGATCCGCGACT+CGG + chr8_3:5271205-5271224 None:intergenic 45.0%
GCGGATCTGCAATAATGTCA+AGG - chr8_3:5271209-5271228 Msa1271820:CDS 45.0%
!! CTAGCACTGATAGACCTGAT+TGG + chr8_3:5271310-5271329 None:intergenic 45.0%
TCATAAGATCTAGCTGGAGG+AGG + chr8_3:5271379-5271398 None:intergenic 45.0%
TCTGCAGCAACTCTACTTCT+TGG + chr8_3:5271562-5271581 None:intergenic 45.0%
! ATAAGTTGGGCGTCTTTCAG+AGG + chr8_3:5271602-5271621 None:intergenic 45.0%
CTGAAAGACGCCCAACTTAT+AGG - chr8_3:5271602-5271621 Msa1271820:CDS 45.0%
TATAGGGATTATCCACCTCG+TGG - chr8_3:5271619-5271638 Msa1271820:CDS 45.0%
! TGGATGATGGTTACAGCCAA+AGG - chr8_3:5271701-5271720 Msa1271820:intron 45.0%
! GTTACAGCCAAAGGTATGAG+AGG - chr8_3:5271710-5271729 Msa1271820:intron 45.0%
ACGATAACTTGGATGGGAAG+GGG + chr8_3:5271752-5271771 None:intergenic 45.0%
CACGATAACTTGGATGGGAA+GGG + chr8_3:5271753-5271772 None:intergenic 45.0%
TCACGATAACTTGGATGGGA+AGG + chr8_3:5271754-5271773 None:intergenic 45.0%
TCCCATCCAAGTTATCGTGA+AGG - chr8_3:5271754-5271773 Msa1271820:intron 45.0%
GTCCTTCACGATAACTTGGA+TGG + chr8_3:5271759-5271778 None:intergenic 45.0%
ACTCCAATCGAGCTCTTGAT+TGG + chr8_3:5271996-5272015 None:intergenic 45.0%
GCTCGATTGGAGTATGACTA+TGG - chr8_3:5272003-5272022 Msa1271820:intron 45.0%
CGATTGGAGTATGACTATGG+TGG - chr8_3:5272006-5272025 Msa1271820:intron 45.0%
TCACAGTACGGTGATGCTTA+TGG - chr8_3:5272036-5272055 Msa1271820:intron 45.0%
ACGGTGATGCTTATGGTGAT+AGG - chr8_3:5272043-5272062 Msa1271820:intron 45.0%
AGAGTCGGAAGATCTAGTCT+TGG - chr8_3:5272154-5272173 Msa1271820:intron 45.0%
TATGGCGGTAATGATGTTGG+AGG - chr8_3:5272352-5272371 Msa1271820:CDS 45.0%
! GAGATTGGTTGAGAAAGGAC+AGG + chr8_3:5272435-5272454 None:intergenic 45.0%
TCCTTTCTCAACCAATCTCG+AGG - chr8_3:5272436-5272455 Msa1271820:intron 45.0%
! TCCTCGAGATTGGTTGAGAA+AGG + chr8_3:5272440-5272459 None:intergenic 45.0%
AATGTATTCTGGTAGGGGCA+CGG - chr8_3:5272532-5272551 Msa1271820:CDS 45.0%
!! ATGACGGCCTTTGAAGCTTA+TGG - chr8_3:5272813-5272832 Msa1271820:CDS 45.0%
ACAAGTAGCATCTCTAGCCT+TGG + chr8_3:5273130-5273149 None:intergenic 45.0%
! GGCTAGAGATGCTACTTGTT+TGG - chr8_3:5273131-5273150 Msa1271820:CDS 45.0%
! GTTTTTACAGTGCTGCAGTC+AGG - chr8_3:5273249-5273268 Msa1271820:intron 45.0%
!! TTGGGATGTGTTGGTGTTGT+AGG - chr8_3:5273359-5273378 Msa1271820:intron 45.0%
ATTATCTTGCAGTCCACCTC+AGG + chr8_3:5273476-5273495 None:intergenic 45.0%
TGAATGTACTTCATGCACCC+TGG - chr8_3:5273693-5273712 Msa1271820:intron 45.0%
AAATCAAGCTAGGTAGGGTG+GGG + chr8_3:5273727-5273746 None:intergenic 45.0%
CTAAATCAAGCTAGGTAGGG+TGG + chr8_3:5273729-5273748 None:intergenic 45.0%
AGACAACCAACAATGTGGGT+CGG + chr8_3:5273859-5273878 None:intergenic 45.0%
! TATGGTTCGGGAGTTGGAAA+GGG + chr8_3:5273895-5273914 None:intergenic 45.0%
! ATATGGTTCGGGAGTTGGAA+AGG + chr8_3:5273896-5273915 None:intergenic 45.0%
GACAACCAACGATATGGTTC+GGG + chr8_3:5273907-5273926 None:intergenic 45.0%
! TGGGTTATTACGGACTGACT+TGG - chr8_3:5274175-5274194 Msa1271820:CDS 45.0%
GCAAAGCAAACAGAACAGTG+TGG + chr8_3:5274214-5274233 None:intergenic 45.0%
! TGTTTGCTTTGCTGTACTGC+AGG - chr8_3:5274222-5274241 Msa1271820:CDS 45.0%
! GTTTGCTTTGCTGTACTGCA+GGG - chr8_3:5274223-5274242 Msa1271820:CDS 45.0%
GCTCTCATCAAGCTCTTGTT+AGG - chr8_3:5274251-5274270 Msa1271820:CDS 45.0%
!!! TTATTGATTTTTTTTATATT+TGG - chr8_3:5268613-5268632 Msa1271820:three_prime_UTR 5.0%
!!! TATTGATTTTTTTTATATTT+GGG - chr8_3:5268614-5268633 Msa1271820:three_prime_UTR 5.0%
GAACCTCTCTTTGGCGTCTT+CGG + chr8_3:5268214-5268233 None:intergenic 50.0%
! AGCGGGTAGTGGTTCAAAGA+GGG - chr8_3:5268234-5268253 Msa1271820:three_prime_UTR 50.0%
TTGGTTGTGGCAGATTTCGG+TGG - chr8_3:5269057-5269076 Msa1271820:three_prime_UTR 50.0%
CCGCCAAAAAAACACCATGG+CGG + chr8_3:5269098-5269117 None:intergenic 50.0%
!!! CCGCCATGGTGTTTTTTTGG+CGG - chr8_3:5269095-5269114 Msa1271820:three_prime_UTR 50.0%
GAGAGACGAGCGTCTAGATT+TGG - chr8_3:5269327-5269346 Msa1271820:three_prime_UTR 50.0%
AGACGAGCGTCTAGATTTGG+AGG - chr8_3:5269330-5269349 Msa1271820:three_prime_UTR 50.0%
! TGAACCTGAGGAGTATGGTG+GGG - chr8_3:5269369-5269388 Msa1271820:three_prime_UTR 50.0%
TGAACAGGAAGAGGGACATG+AGG - chr8_3:5269414-5269433 Msa1271820:three_prime_UTR 50.0%
TGAGGTGGGAGATGAAGTTG+AGG - chr8_3:5269432-5269451 Msa1271820:three_prime_UTR 50.0%
TGAAGAAGGTGATTCAGGCG+AGG - chr8_3:5269477-5269496 Msa1271820:three_prime_UTR 50.0%
GATGGCTGATGTGGATGAAG+AGG - chr8_3:5269585-5269604 Msa1271820:three_prime_UTR 50.0%
TTGTGAAGGAGAGGCGAAAG+CGG - chr8_3:5269620-5269639 Msa1271820:three_prime_UTR 50.0%
! ATTTGTTGGGGGCCTAGACA+AGG - chr8_3:5269657-5269676 Msa1271820:three_prime_UTR 50.0%
TGAAGTTGGGGTTGTGACTG+AGG - chr8_3:5269714-5269733 Msa1271820:three_prime_UTR 50.0%
!! ATGTGGTGTTACTCCGAGTC+AGG - chr8_3:5269949-5269968 Msa1271820:CDS 50.0%
! AGGGTATCACTGTCCTGACT+CGG + chr8_3:5269965-5269984 None:intergenic 50.0%
AGGCATCCATTGCATCTGAG+CGG + chr8_3:5270262-5270281 None:intergenic 50.0%
! TCCTTCTAGTGGTTGGTTCC+AGG - chr8_3:5270759-5270778 Msa1271820:CDS 50.0%
ACCTGGAACCAACCACTAGA+AGG + chr8_3:5270763-5270782 None:intergenic 50.0%
TAGTCCTTTCTACGAGCAGC+TGG + chr8_3:5270946-5270965 None:intergenic 50.0%
GCTGCTCGTAGAAAGGACTA+TGG - chr8_3:5270946-5270965 Msa1271820:CDS 50.0%
AGAGGCCGAGGAAAACATGT+TGG - chr8_3:5271163-5271182 Msa1271820:CDS 50.0%
CGAGGAAAACATGTTGGTCG+TGG - chr8_3:5271169-5271188 Msa1271820:CDS 50.0%
TTATTGCAGATCCGCGACTC+GGG + chr8_3:5271204-5271223 None:intergenic 50.0%
! GCACTGATAGACCTGATTGG+CGG + chr8_3:5271307-5271326 None:intergenic 50.0%
! GGTAGTGGCCTACTTCTAAC+TGG + chr8_3:5271358-5271377 None:intergenic 50.0%
GCAACTCTACTTCTTGGAGG+TGG + chr8_3:5271556-5271575 None:intergenic 50.0%
GCAGCAACTCTACTTCTTGG+AGG + chr8_3:5271559-5271578 None:intergenic 50.0%
TCAGAGTAGTCAGATCCACG+AGG + chr8_3:5271637-5271656 None:intergenic 50.0%
CAGCACGAGCAGTACTTCTA+GGG + chr8_3:5271663-5271682 None:intergenic 50.0%
TCATCCACGTAACCTCTCCT+AGG + chr8_3:5271688-5271707 None:intergenic 50.0%
AGGAGAGGTTACGTGGATGA+TGG - chr8_3:5271688-5271707 Msa1271820:CDS 50.0%
CGATAACTTGGATGGGAAGG+GGG + chr8_3:5271751-5271770 None:intergenic 50.0%
ATCTTGGGGGAACATCATCC+TGG + chr8_3:5271954-5271973 None:intergenic 50.0%
!! ACCAGTATCGGCGTATCTTG+GGG + chr8_3:5271968-5271987 None:intergenic 50.0%
!! CACCAGTATCGGCGTATCTT+GGG + chr8_3:5271969-5271988 None:intergenic 50.0%
TGATTGGCGAGCACCAGTAT+CGG + chr8_3:5271980-5271999 None:intergenic 50.0%
TCGCCAATCAAGAGCTCGAT+TGG - chr8_3:5271990-5272009 Msa1271820:intron 50.0%
GGCAGCCGAAGTTCTATTTC+TGG - chr8_3:5272187-5272206 Msa1271820:CDS 50.0%
CACATGGGGTGTATAGCAGT+CGG - chr8_3:5272218-5272237 Msa1271820:CDS 50.0%
TTCCGATCAGGCTCTTATGG+CGG - chr8_3:5272337-5272356 Msa1271820:CDS 50.0%
TACCGCCATAAGAGCCTGAT+CGG + chr8_3:5272342-5272361 None:intergenic 50.0%
GGCGGTGATTATGTTTCTCG+TGG - chr8_3:5272394-5272413 Msa1271820:intron 50.0%
CTCAACCAATCTCGAGGAGT+CGG - chr8_3:5272442-5272461 Msa1271820:intron 50.0%
! GTTCCTGTGATGTAGGTTGG+TGG - chr8_3:5272494-5272513 Msa1271820:intron 50.0%
! ATGTATTCTGGTAGGGGCAC+GGG - chr8_3:5272533-5272552 Msa1271820:CDS 50.0%
ATGGCGAAGGTTGCACATTG+TGG - chr8_3:5272735-5272754 Msa1271820:CDS 50.0%
AGCTATCTCGGGTCTTCTCT+AGG - chr8_3:5272931-5272950 Msa1271820:CDS 50.0%
TATCTCGGGTCTTCTCTAGG+TGG - chr8_3:5272934-5272953 Msa1271820:CDS 50.0%
ATCTCGGGTCTTCTCTAGGT+GGG - chr8_3:5272935-5272954 Msa1271820:CDS 50.0%
GGACTCAAGTTAGTGAGCGA+TGG - chr8_3:5272990-5273009 Msa1271820:CDS 50.0%
GCGAAATCGGGAAACTATGC+AGG + chr8_3:5273534-5273553 None:intergenic 50.0%
AATCAAGCTAGGTAGGGTGG+GGG + chr8_3:5273726-5273745 None:intergenic 50.0%
GACAACCAACAATGTGGGTC+GGG + chr8_3:5273858-5273877 None:intergenic 50.0%
! CAACGATATGGTTCGGGAGT+TGG + chr8_3:5273901-5273920 None:intergenic 50.0%
CAACTCCCGAACCATATCGT+TGG - chr8_3:5273899-5273918 Msa1271820:intron 50.0%
! TCACTGGGCGTGGGTTATTA+CGG - chr8_3:5274165-5274184 Msa1271820:CDS 50.0%
GACGCCAAAGAGAGGTTCAG+CGG - chr8_3:5268216-5268235 Msa1271820:three_prime_UTR 55.0%
ACGCCAAAGAGAGGTTCAGC+GGG - chr8_3:5268217-5268236 Msa1271820:three_prime_UTR 55.0%
CTACCCGCTGAACCTCTCTT+TGG + chr8_3:5268223-5268242 None:intergenic 55.0%
AAGAGAGGTTCAGCGGGTAG+TGG - chr8_3:5268223-5268242 Msa1271820:three_prime_UTR 55.0%
! CAGCGGGTAGTGGTTCAAAG+AGG - chr8_3:5268233-5268252 Msa1271820:three_prime_UTR 55.0%
! GCGGGTAGTGGTTCAAAGAG+GGG - chr8_3:5268235-5268254 Msa1271820:three_prime_UTR 55.0%
! GGTAGTGGTTCAAAGAGGGG+TGG - chr8_3:5268238-5268257 Msa1271820:three_prime_UTR 55.0%
AGGGGTGGCAGATTATCGAG+AGG - chr8_3:5268253-5268272 Msa1271820:three_prime_UTR 55.0%
TCAACCCCACCATACTCCTC+AGG + chr8_3:5269376-5269395 None:intergenic 55.0%
ACAGGAAGAGGGACATGAGG+TGG - chr8_3:5269417-5269436 Msa1271820:three_prime_UTR 55.0%
CAGGAAGAGGGACATGAGGT+GGG - chr8_3:5269418-5269437 Msa1271820:three_prime_UTR 55.0%
GGCGAGGAAGAAGTCGAAGA+TGG - chr8_3:5269493-5269512 Msa1271820:three_prime_UTR 55.0%
GGATGACGAGCATGCTGATG+AGG - chr8_3:5269540-5269559 Msa1271820:three_prime_UTR 55.0%
TTGGGGTTGTGACTGAGGTC+AGG - chr8_3:5269719-5269738 Msa1271820:three_prime_UTR 55.0%
TTCCTCCCGCTCAGATGCAA+TGG - chr8_3:5270253-5270272 Msa1271820:intron 55.0%
ATCCATTGCATCTGAGCGGG+AGG + chr8_3:5270258-5270277 None:intergenic 55.0%
GGCATCCATTGCATCTGAGC+GGG + chr8_3:5270261-5270280 None:intergenic 55.0%
GGGTGTTCAGCATGACACAC+CGG - chr8_3:5270714-5270733 Msa1271820:CDS 55.0%
CATGCCAGCTGCTCGTAGAA+AGG - chr8_3:5270939-5270958 Msa1271820:CDS 55.0%
AGCAGCATCGTGTGAGCCAA+AGG + chr8_3:5270980-5270999 None:intergenic 55.0%
TTCAGGCCAAAGTGAGGGCT+AGG - chr8_3:5271122-5271141 Msa1271820:intron 55.0%
! TTTCCTCGGCCTCTCTGAAG+TGG + chr8_3:5271157-5271176 None:intergenic 55.0%
AGAAACTACGGGGTGCAGGT+CGG + chr8_3:5271249-5271268 None:intergenic 55.0%
TCGCGTGGGGTAAGAGGAAT+TGG - chr8_3:5271271-5271290 Msa1271820:CDS 55.0%
GATCTAGCTGGAGGAGGTAG+TGG + chr8_3:5271373-5271392 None:intergenic 55.0%
GAGTAGTCAGATCCACGAGG+TGG + chr8_3:5271634-5271653 None:intergenic 55.0%
GCAGCACGAGCAGTACTTCT+AGG + chr8_3:5271664-5271683 None:intergenic 55.0%
TGCACCTAGGAGAGGTTACG+TGG - chr8_3:5271681-5271700 Msa1271820:CDS 55.0%
GAGGTGGCCTCTCATACCTT+TGG + chr8_3:5271720-5271739 None:intergenic 55.0%
TAACTTGGATGGGAAGGGGG+TGG + chr8_3:5271748-5271767 None:intergenic 55.0%
GGGCGTCCTTCACGATAACT+TGG + chr8_3:5271763-5271782 None:intergenic 55.0%
AAAACGTTCGTACGCTGCCG+TGG - chr8_3:5271810-5271829 Msa1271820:intron 55.0%
GGGGGAACATCATCCTGGTT+GGG + chr8_3:5271949-5271968 None:intergenic 55.0%
TGGGGGAACATCATCCTGGT+TGG + chr8_3:5271950-5271969 None:intergenic 55.0%
!! CCAGTATCGGCGTATCTTGG+GGG + chr8_3:5271967-5271986 None:intergenic 55.0%
!! GCACCAGTATCGGCGTATCT+TGG + chr8_3:5271970-5271989 None:intergenic 55.0%
GGTGGCAGTGCTTCACAGTA+CGG - chr8_3:5272024-5272043 Msa1271820:intron 55.0%
AGTCGGCAGGGCATGAGTTA+TGG - chr8_3:5272235-5272254 Msa1271820:CDS 55.0%
CAGGGCATGAGTTATGGTGG+AGG - chr8_3:5272241-5272260 Msa1271820:CDS 55.0%
ACAGTCCGACTCCTCGAGAT+TGG + chr8_3:5272450-5272469 None:intergenic 55.0%
CTGCCACCAACCTACATCAC+AGG + chr8_3:5272500-5272519 None:intergenic 55.0%
! GGTGGCGGTAGCAGTTACAT+GGG - chr8_3:5272554-5272573 Msa1271820:CDS 55.0%
GGTAGCAGTTACATGGGCAG+CGG - chr8_3:5272560-5272579 Msa1271820:CDS 55.0%
TTACATGGGCAGCGGTGGTT+CGG - chr8_3:5272568-5272587 Msa1271820:CDS 55.0%
! CTTTTCGCAAGGGATGGCGA+AGG - chr8_3:5272722-5272741 Msa1271820:CDS 55.0%
ATCAAGCTAGGTAGGGTGGG+GGG + chr8_3:5273725-5273744 None:intergenic 55.0%
CAACAATGTGGGTCGGGAGT+TGG + chr8_3:5273852-5273871 None:intergenic 55.0%
CAACTCCCGACCCACATTGT+TGG - chr8_3:5273850-5273869 Msa1271820:intron 55.0%
CCTCTCTTTGGCGTCTTCGG+AGG + chr8_3:5268211-5268230 None:intergenic 60.0%
CCTCCGAAGACGCCAAAGAG+AGG - chr8_3:5268208-5268227 Msa1271820:three_prime_UTR 60.0%
GACGAGAAACTACGGGGTGC+AGG + chr8_3:5271253-5271272 None:intergenic 60.0%
CCACGCGACGAGAAACTACG+GGG + chr8_3:5271259-5271278 None:intergenic 60.0%
CCCACGCGACGAGAAACTAC+GGG + chr8_3:5271260-5271279 None:intergenic 60.0%
CCCGTAGTTTCTCGTCGCGT+GGG - chr8_3:5271257-5271276 Msa1271820:CDS 60.0%
CCCCACGCGACGAGAAACTA+CGG + chr8_3:5271261-5271280 None:intergenic 60.0%
CCGTAGTTTCTCGTCGCGTG+GGG - chr8_3:5271258-5271277 Msa1271820:CDS 60.0%
TTCTCGTCGCGTGGGGTAAG+AGG - chr8_3:5271265-5271284 Msa1271820:CDS 60.0%
GAAGTCGTGCTCCGCCAATC+AGG - chr8_3:5271293-5271312 Msa1271820:CDS 60.0%
GTACTGCTCGTGCTGCACCT+AGG - chr8_3:5271668-5271687 Msa1271820:CDS 60.0%
CCCCCAAGATACGCCGATAC+TGG - chr8_3:5271964-5271983 Msa1271820:intron 60.0%
TGGGGTGTATAGCAGTCGGC+AGG - chr8_3:5272222-5272241 Msa1271820:CDS 60.0%
GGGGTGTATAGCAGTCGGCA+GGG - chr8_3:5272223-5272242 Msa1271820:CDS 60.0%
CGGCAGGGCATGAGTTATGG+TGG - chr8_3:5272238-5272257 Msa1271820:CDS 60.0%
! TATTCTGGTAGGGGCACGGG+TGG - chr8_3:5272536-5272555 Msa1271820:CDS 60.0%
! GGGTGGCGGTAGCAGTTACA+TGG - chr8_3:5272553-5272572 Msa1271820:CDS 60.0%
AGCAGTTACATGGGCAGCGG+TGG - chr8_3:5272563-5272582 Msa1271820:CDS 60.0%
TACATGGGCAGCGGTGGTTC+GGG - chr8_3:5272569-5272588 Msa1271820:CDS 60.0%
AGGGTGGGGGGGTAAAACCA+GGG + chr8_3:5273713-5273732 None:intergenic 60.0%
TAGGGTGGGGGGGTAAAACC+AGG + chr8_3:5273714-5273733 None:intergenic 60.0%
TCAAGCTAGGTAGGGTGGGG+GGG + chr8_3:5273724-5273743 None:intergenic 60.0%
GGAGCATGACCGTGAGCGTG+CGG - chr8_3:5269561-5269580 Msa1271820:three_prime_UTR 65.0%
TGACCGTGAGCGTGCGGAGA+TGG - chr8_3:5269567-5269586 Msa1271820:three_prime_UTR 65.0%
CAGCCATCTCCGCACGCTCA+CGG + chr8_3:5269573-5269592 None:intergenic 65.0%
GCGTGCGGAGATGGCTGATG+TGG - chr8_3:5269576-5269595 Msa1271820:three_prime_UTR 65.0%
AGGCCACTTCAGAGAGGCCG+AGG - chr8_3:5271151-5271170 Msa1271820:CDS 65.0%
GCAGGTCGGCTGCTCCAAGA+AGG + chr8_3:5271235-5271254 None:intergenic 65.0%
CCCCGTAGTTTCTCGTCGCG+TGG - chr8_3:5271256-5271275 Msa1271820:CDS 65.0%
GCTCGTGCTGCACCTAGGAG+AGG - chr8_3:5271673-5271692 Msa1271820:CDS 65.0%
CTTGGATGGGAAGGGGGTGG+AGG + chr8_3:5271745-5271764 None:intergenic 65.0%
GGGGACTATCGCCCGAGTCG+CGG - chr8_3:5271190-5271209 Msa1271820:CDS 70.0%
GAAGGGGGTGGAGGAGGAGG+TGG + chr8_3:5271736-5271755 None:intergenic 70.0%
TGGGAAGGGGGTGGAGGAGG+AGG + chr8_3:5271739-5271758 None:intergenic 70.0%
GGATGGGAAGGGGGTGGAGG+AGG + chr8_3:5271742-5271761 None:intergenic 70.0%
! TCTGGTAGGGGCACGGGTGG+CGG - chr8_3:5272539-5272558 Msa1271820:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 5268067 5274474 5268067 ID=Msa1271820;Name=Msa1271820
chr8_3 mRNA 5268067 5274474 5268067 ID=Msa1271820-mRNA-1;Parent=Msa1271820;Name=Msa1271820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=138|1|1|1|0.90|0.83|12|1692|800
chr8_3 exon 5268067 5269757 5268067 ID=Msa1271820-mRNA-1:exon:1876;Parent=Msa1271820-mRNA-1
chr8_3 exon 5269936 5270032 5269936 ID=Msa1271820-mRNA-1:exon:1875;Parent=Msa1271820-mRNA-1
chr8_3 exon 5270118 5270194 5270118 ID=Msa1271820-mRNA-1:exon:1874;Parent=Msa1271820-mRNA-1
chr8_3 exon 5270279 5270385 5270279 ID=Msa1271820-mRNA-1:exon:1873;Parent=Msa1271820-mRNA-1
chr8_3 exon 5270477 5270586 5270477 ID=Msa1271820-mRNA-1:exon:1872;Parent=Msa1271820-mRNA-1
chr8_3 exon 5270710 5271044 5270710 ID=Msa1271820-mRNA-1:exon:1871;Parent=Msa1271820-mRNA-1
chr8_3 exon 5271129 5271414 5271129 ID=Msa1271820-mRNA-1:exon:1870;Parent=Msa1271820-mRNA-1
chr8_3 exon 5271488 5271709 5271488 ID=Msa1271820-mRNA-1:exon:1869;Parent=Msa1271820-mRNA-1
chr8_3 exon 5272156 5272395 5272156 ID=Msa1271820-mRNA-1:exon:1868;Parent=Msa1271820-mRNA-1
chr8_3 exon 5272517 5272606 5272517 ID=Msa1271820-mRNA-1:exon:1867;Parent=Msa1271820-mRNA-1
chr8_3 exon 5272695 5273254 5272695 ID=Msa1271820-mRNA-1:exon:1866;Parent=Msa1271820-mRNA-1
chr8_3 exon 5274057 5274474 5274057 ID=Msa1271820-mRNA-1:exon:1865;Parent=Msa1271820-mRNA-1
chr8_3 five_prime_UTR 5274337 5274474 5274337 ID=Msa1271820-mRNA-1:five_prime_utr;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5274057 5274336 5274057 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5272695 5273254 5272695 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5272517 5272606 5272517 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5272156 5272395 5272156 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5271488 5271709 5271488 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5271129 5271414 5271129 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5270710 5271044 5270710 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5270477 5270586 5270477 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5270279 5270385 5270279 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5270118 5270194 5270118 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 CDS 5269937 5270032 5269937 ID=Msa1271820-mRNA-1:cds;Parent=Msa1271820-mRNA-1
chr8_3 three_prime_UTR 5269936 5269936 5269936 ID=Msa1271820-mRNA-1:three_prime_utr;Parent=Msa1271820-mRNA-1
chr8_3 three_prime_UTR 5268067 5269757 5268067 ID=Msa1271820-mRNA-1:three_prime_utr;Parent=Msa1271820-mRNA-1
Gene Sequence

>Msa1271820

ATGCCTCCGAAGACGCCAAAGAGAGGTTCAGCGGGTAGTGGTTCAAAGAGGGGTGGCAGATTATCGAGAGGAACTGCGAAATCTGCACAGAATCAACAACAACAGCAATCTGAACCTGTTGAAGAGAAGACGGTGATTGAAGAAGAGATCAAGGTAGAAGAGAATCTCGTTGTTGAGGAAAAACCTGTGGTGGAAGAAGATAATCCTGTCGTTGAAGATAAAGCTATTGATATGAATCAAATTGCTCCTGAGGCTGTAGAAGATGCTAATCTAGCCAAAAAAGATGAAGAGGAGGTTAAGGAGTCTATAGATGAATATGAGAGAGACGAGCGTCTAGATTTGGAGGATAATGATCCTGAGTATGAACCTGAGGAGTATGGTGGGGTTGACTATGATGAGAAGGAAATTGAACAGGAAGAGGGACATGAGGTGGGAGATGAAGTTGAGGAAGAACCTGAAGAAAATGTTGGTGAAGAAGGTGATTCAGGCGAGGAAGAAGTCGAAGATGGTCATGATGAAATTGAGGGAGAAGAGGATGACGAGCATGCTGATGAGGAGCATGACCGTGAGCGTGCGGAGATGGCTGATGTGGATGAAGAGGAACATCGTGAAGTTGTGAAGGAGAGGCGAAAGCGGAAAGAATTTGAAGTATTTGTTGGGGGCCTAGACAAGGATGCTACTGAAGATGATCTGAGGAAGGTTTTCGGTGAAGTTGGGGTTGTGACTGAGGTCAGGCTGATGATGAATCCTCAGACAAAAAAGAACAAGGGATTTGCATTCTTGCGGTTTGAAAATGTGGAACAAGCAAAACGAGCTGTAGCAGAGCTTAAAAACCCAGTGATTAATGGAAAACAATGTGGTGTTACTCCGAGTCAGGACAGTGATACCCTCTATTTGGGAAACATATGCAAAACATGGACAAAGGAAGCTTTAAAGGAGAAGTTGAAGCATTATGGAGTTACAAATGTTGAGGATATAACTTTGGTAGAAGATTCTAATGATAAAGGAACAAACCGTGGATTTGCATTCTTGGAATTTTCCTCCCGCTCAGATGCAATGGATGCCTTTAAGAGACTGCAGAAGAGGGATGTTACGTTTGGAGTTGATAAGCCTGCAAAGGTTTCATTTGCAGATTCTTTTATTGACCCGGGTGATGAAATTATGTCACAGGTTAAAACTGTATTTATTGATGCACTTCCTCCTTCATGGGATGAAGATTATGTCCGGAATCTTCTGAAGAAATATGGCGAGGTTGAAAAGATTGAGCTTGCAAGGAACATGCCAGCTGCTCGTAGAAAGGACTATGGATTTGTTACCTTTGGCTCACACGATGCTGCTATAAGATGTGCTGACAGCATTACTGGTACAGAATTGGGTGAAGGTGACAAAAAGGCCAAAGTGAGGGCTAGGTTATCAAGGCCACTTCAGAGAGGCCGAGGAAAACATGTTGGTCGTGGGGACTATCGCCCGAGTCGCGGATCTGCAATAATGTCAAGGCCTTCTTGGAGCAGCCGACCTGCACCCCGTAGTTTCTCGTCGCGTGGGGTAAGAGGAATTGGAAGTCGTGCTCCGCCAATCAGGTCTATCAGTGCTAGAGATAGACGCCCTGTCATGTCTATACCAGTTAGAAGTAGGCCACTACCTCCTCCAGCTAGATCTTATGATAGAAGACCAGCTGATGCTGCATATTCAAAAAGCAGTGTGAAGAGAGATTATGGTCGGCGTGATGATCTACCACCTCCAAGAAGTAGAGTTGCTGCAGATTATGGATCAAGGATGACCTCTGAAAGACGCCCAACTTATAGGGATTATCCACCTCGTGGATCTGACTACTCTGATCTCCCTAGAAGTACTGCTCGTGCTGCACCTAGGAGAGGTTACGTGGATGATGGTTACAGCCAAAGGTATGAGAGGCCACCTCCTCCTCCACCCCCTTCCCATCCAAGTTATCGTGAAGGACGCCCTCGTGATTATGATTCTCTATCTGGCTCAAAACGTTCGTACGCTGCCGTGGATGATGTTCCCCCAAGATACGCCGATACTGGTGCTCGCCAATCAAGAGCTCGATTGGAGTATGACTATGGTGGCAGTGCTTCACAGTACGGTGATGCTTATGGTGATAGAGTCGGAAGATCTAGTCTTGGATATGGTAGTGGCAGCCGAAGTTCTATTTCTGGTCAAGATTCACATGGGGTGTATAGCAGTCGGCAGGGCATGAGTTATGGTGGAGGCTCTTATGGCGGTAATGATGTTGGAGGCATGTACTCATCAAGTTATGGCGGTGATTATGTTTCTCGTGGAAATGATGTTGGTGGCAGCTCATATTCATCAATGTATTCTGGTAGGGGCACGGGTGGCGGTAGCAGTTACATGGGCAGCGGTGGTTCGGGATCTTATTATTGA
Protein sequence

>Msa1271820

MPPKTPKRGSAGSGSKRGGRLSRGTAKSAQNQQQQQSEPVEEKTVIEEEIKVEENLVVEEKPVVEEDNPVVEDKAIDMNQIAPEAVEDANLAKKDEEEVKESIDEYERDERLDLEDNDPEYEPEEYGGVDYDEKEIEQEEGHEVGDEVEEEPEENVGEEGDSGEEEVEDGHDEIEGEEDDEHADEEHDRERAEMADVDEEEHREVVKERRKRKEFEVFVGGLDKDATEDDLRKVFGEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAELKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDKGTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVFIDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITGTELGEGDKKAKVRARLSRPLQRGRGKHVGRGDYRPSRGSAIMSRPSWSSRPAPRSFSSRGVRGIGSRAPPIRSISARDRRPVMSIPVRSRPLPPPARSYDRRPADAAYSKSSVKRDYGRRDDLPPPRSRVAADYGSRMTSERRPTYRDYPPRGSDYSDLPRSTARAAPRRGYVDDGYSQRYERPPPPPPPSHPSYREGRPRDYDSLSGSKRSYAAVDDVPPRYADTGARQSRARLEYDYGGSASQYGDAYGDRVGRSSLGYGSGSRSSISGQDSHGVYSSRQGMSYGGGSYGGNDVGGMYSSSYGGDYVSRGNDVGGSSYSSMYSGRGTGGGSSYMGSGGSGSYY*