AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1229180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229180 MtrunA17_Chr8g0335981 99.000 800 8 0 1 800 1 800 0.0 1582
Msa1229180 MtrunA17_Chr7g0250221 63.027 806 231 15 1 783 1 762 0.0 851
Msa1229180 MtrunA17_Chr8g0372111 57.241 290 120 2 192 477 392 681 2.83e-106 349
Msa1229180 MtrunA17_Chr7g0276201 29.139 302 201 9 175 474 67 357 4.12e-33 134
Msa1229180 MtrunA17_Chr7g0266451 31.020 245 161 5 216 459 102 339 8.16e-30 124
Msa1229180 MtrunA17_Chr4g0026301 29.893 281 187 6 181 458 77 350 5.27e-29 122
Msa1229180 MtrunA17_Chr1g0153181 24.016 254 170 7 217 458 34 276 2.09e-15 80.5
Msa1229180 MtrunA17_Chr4g0068631 30.508 177 102 6 216 378 89 258 1.17e-14 78.2
Msa1229180 MtrunA17_Chr6g0465751 22.134 253 178 6 217 461 27 268 1.57e-12 71.2
Msa1229180 MtrunA17_Chr2g0288251 23.792 269 171 10 217 459 62 322 3.46e-12 69.3
Msa1229180 MtrunA17_Chr3g0134141 23.504 234 160 7 217 440 26 250 5.02e-12 69.3
Msa1229180 MtrunA17_Chr7g0265341 22.353 255 175 6 217 459 72 315 2.66e-11 67.4
Msa1229180 MtrunA17_Chr0c09g0493511 22.022 277 177 9 210 460 26 289 7.81e-11 65.5
Msa1229180 MtrunA17_Chr4g0044541 27.313 227 131 6 200 402 200 416 8.42e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1229180 AT2G44710.2 57.340 797 291 15 1 766 1 779 0.0 710
Msa1229180 AT2G44710.1 57.340 797 291 15 1 766 1 779 0.0 710
Msa1229180 AT2G44710.4 60.993 705 233 11 90 766 4 694 0.0 701
Msa1229180 AT2G44710.3 52.668 431 110 13 390 766 25 415 4.02e-109 341
Msa1229180 AT4G00830.2 30.225 311 189 9 153 450 53 348 2.92e-33 135
Msa1229180 AT4G00830.1 30.225 311 189 9 153 450 53 348 2.92e-33 135
Msa1229180 AT4G00830.6 30.225 311 189 9 153 450 53 348 2.92e-33 135
Msa1229180 AT4G00830.4 29.582 311 191 9 153 450 53 348 1.88e-31 129
Msa1229180 AT4G00830.3 28.939 311 185 9 153 450 53 340 4.05e-29 122
Msa1229180 AT4G00830.5 28.939 311 185 9 153 450 53 340 4.05e-29 122
Msa1229180 AT3G52660.3 28.490 351 212 8 101 448 10 324 1.80e-18 89.7
Msa1229180 AT3G52660.1 28.490 351 212 8 101 448 10 324 1.80e-18 89.7
Msa1229180 AT3G52660.2 28.490 351 212 8 101 448 10 324 1.80e-18 89.7
Msa1229180 AT2G47310.1 31.667 180 102 5 216 378 111 286 8.56e-16 81.6
Msa1229180 AT4G34110.1 23.622 254 171 6 217 458 38 280 5.99e-15 79.3
Msa1229180 AT4G34110.1 28.241 216 123 5 211 402 211 418 8.01e-11 66.2
Msa1229180 AT4G16280.3 27.586 174 111 3 216 378 121 290 1.95e-13 74.3
Msa1229180 AT4G16280.2 27.586 174 111 3 216 378 121 290 2.97e-13 73.9
Msa1229180 AT4G16280.4 27.586 174 111 3 216 378 46 215 4.98e-13 73.2
Msa1229180 AT3G16380.1 25.097 259 165 7 217 459 23 268 7.77e-13 72.4
Msa1229180 AT1G49760.1 22.742 299 188 8 210 473 128 418 1.41e-12 71.6
Msa1229180 AT1G49760.2 22.742 299 188 8 210 473 128 418 1.41e-12 71.6
Msa1229180 AT3G13224.2 31.034 145 83 5 216 348 20 159 2.47e-12 69.7
Msa1229180 AT1G71770.1 23.256 258 172 7 217 460 61 306 9.06e-12 69.3
Msa1229180 AT1G71770.2 23.256 258 172 7 217 460 61 306 9.06e-12 69.3
Msa1229180 AT2G36660.1 23.320 253 173 6 217 459 26 267 1.15e-11 68.9
Msa1229180 AT3G13224.3 31.034 145 83 5 216 348 11 150 1.21e-11 67.4
Msa1229180 AT1G22760.1 21.933 269 176 8 217 459 138 398 1.40e-11 68.6

Find 335 sgRNAs with CRISPR-Local

Find 506 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCTGCAATTTCAGATTAA+TGG 0.120288 8_2:-4823753 Msa1229180:intron
GCTATTTATAGCATTATATT+TGG 0.124459 8_2:-4820800 Msa1229180:three_prime_UTR
TGCGATCCACAAAGAAATTT+AGG 0.171647 8_2:-4825511 Msa1229180:five_prime_UTR
ACTCAACATTGCTTAGAAAT+AGG 0.177085 8_2:+4819625 None:intergenic
CTATATGAATACACTATTTA+TGG 0.194206 8_2:+4819730 None:intergenic
CCTCTTCTGCAGTCTCTTAA+AGG 0.203548 8_2:+4823394 None:intergenic
CTGAAAGACGCCCAACTTAT+AGG 0.217326 8_2:-4822071 Msa1229180:CDS
CTTGTTTGGTTAAGGATTAA+TGG 0.234976 8_2:-4820529 Msa1229180:three_prime_UTR
TTCTTTCAATTTGCTATCAT+TGG 0.237245 8_2:-4819302 Msa1229180:three_prime_UTR
AAGGAGAAGTTGAAGCATTA+TGG 0.243038 8_2:-4823524 Msa1229180:CDS
TTGGGATGTGTTGGTGTTGT+AGG 0.249916 8_2:-4820316 Msa1229180:three_prime_UTR
GGACAGTGATACCCTCTATT+TGG 0.255911 8_2:-4823703 Msa1229180:CDS
GGCAGCCGAAGTTCTATTTC+TGG 0.258447 8_2:-4821487 Msa1229180:CDS
AGTAGAGTTGCTGCAGATTA+TGG 0.261306 8_2:-4822108 Msa1229180:CDS
AAACCGTGGATTTGCATTCT+TGG 0.273692 8_2:-4823447 Msa1229180:CDS
GCAGCACGAGCAGTACTTCT+AGG 0.280985 8_2:+4822012 None:intergenic
ATGACGGCCTTTGAAGCTTA+TGG 0.290365 8_2:-4820861 Msa1229180:three_prime_UTR
CGTGATTATGATTCTCTATC+TGG 0.292725 8_2:-4821889 Msa1229180:CDS
ATGTTATGAAGCTTACAATT+TGG 0.313318 8_2:-4820838 Msa1229180:three_prime_UTR
GAGAGACGAGCGTCTAGATT+TGG 0.313762 8_2:-4824346 Msa1229180:CDS
TTACATGGGCAGCGGTGGTT+CGG 0.320424 8_2:-4821106 Msa1229180:CDS
CAATAATGTCAAGGCCTTCT+TGG 0.321408 8_2:-4822455 Msa1229180:CDS
GTAGAAGATTCTAATGATAA+AGG 0.321671 8_2:-4823473 Msa1229180:CDS
GCGATCCACAAAGAAATTTA+GGG 0.321865 8_2:-4825510 Msa1229180:five_prime_UTR
AAATAATTACTATGCGAAAT+CGG 0.321968 8_2:+4820131 None:intergenic
ACAGATCCGACATAATAAAT+TGG 0.322938 8_2:-4820894 Msa1229180:intron
AGAAGATGAAGAGGAGGTTA+AGG 0.326174 8_2:-4824388 Msa1229180:CDS
CGGAATCTTCTGAAGAAATA+TGG 0.327291 8_2:-4822787 Msa1229180:CDS
GACTATGGATTTGTTACCTT+TGG 0.329610 8_2:-4822712 Msa1229180:CDS
CAGCATTACTGGTACAGAAT+TGG 0.331570 8_2:-4822659 Msa1229180:CDS
AGTAATAAGAATACTACTTC+AGG 0.334390 8_2:-4820366 Msa1229180:three_prime_UTR
GTTATTGAATTTGTGATGTA+TGG 0.337285 8_2:-4820705 Msa1229180:three_prime_UTR
TGCTCCAATACCATTTCATT+TGG 0.338317 8_2:-4820577 Msa1229180:three_prime_UTR
GTCTTCGGAGGCATTGTTAT+TGG 0.339548 8_2:+4825475 None:intergenic
TTGATGCACTTCCTCCTTCA+TGG 0.343649 8_2:-4822825 Msa1229180:CDS
AGATGTGCTGACAGCATTAC+TGG 0.343835 8_2:-4822670 Msa1229180:CDS
ATTGGGTGAAGGTGACAAAA+AGG 0.345418 8_2:-4822641 Msa1229180:intron
ACTCTAGTTTAGCTCTTGTT+AGG 0.347194 8_2:-4819374 Msa1229180:three_prime_UTR
GGCTAGAGATGCTACTTGTT+TGG 0.347463 8_2:-4820543 Msa1229180:three_prime_UTR
AGATGCTACTTGTTTGGTTA+AGG 0.350748 8_2:-4820537 Msa1229180:three_prime_UTR
CGAAACCCTAAATTTCTTTG+TGG 0.355378 8_2:+4825505 None:intergenic
CTATTTATAGCATTATATTT+GGG 0.356269 8_2:-4820799 Msa1229180:three_prime_UTR
AAAGAATTTGAAGTATTTGT+TGG 0.357926 8_2:-4824030 Msa1229180:CDS
TTAAGAAGATATTGCTCGTT+AGG 0.359179 8_2:-4819680 Msa1229180:three_prime_UTR
CTCAACATTGCTTAGAAATA+GGG 0.362973 8_2:+4819626 None:intergenic
TCTGCAGCAACTCTACTTCT+TGG 0.363608 8_2:+4822114 None:intergenic
TGAAAGACGCCCAACTTATA+GGG 0.364958 8_2:-4822070 Msa1229180:CDS
GTTGGTGAAGAAGGTGATTC+AGG 0.368423 8_2:-4824201 Msa1229180:CDS
AAAGAGATGTTTAGTTACTT+TGG 0.370338 8_2:-4820455 Msa1229180:three_prime_UTR
TCACTGGGCGTGGGTTATTA+CGG 0.372222 8_2:-4819511 Msa1229180:three_prime_UTR
TGTTAGGTAACATACCTATA+TGG 0.373043 8_2:-4819409 Msa1229180:three_prime_UTR
TACATGGGCAGCGGTGGTTC+GGG 0.376852 8_2:-4821105 Msa1229180:CDS
AAGAATTTGAAGTATTTGTT+GGG 0.376985 8_2:-4824029 Msa1229180:CDS
TCTGCAAATGAAACCTTTGC+AGG 0.379216 8_2:+4823347 None:intergenic
TCATATTCATCAATGTATTC+TGG 0.380188 8_2:-4821153 Msa1229180:CDS
TGATTAAAGTGCAATCGAAC+GGG 0.380477 8_2:+4819201 None:intergenic
AGCAGTGTGAAGAGAGATTA+TGG 0.381697 8_2:-4822159 Msa1229180:CDS
GAACCTCTCTTTGGCGTCTT+CGG 0.383318 8_2:+4825460 None:intergenic
TCGCGTGGGGTAAGAGGAAT+TGG 0.383971 8_2:-4822402 Msa1229180:CDS
AATTTAATTAATATATTCAC+TGG 0.386689 8_2:-4819527 Msa1229180:three_prime_UTR
ACTCAAGACAACCAACGATA+TGG 0.390525 8_2:+4819766 None:intergenic
TTCTCGTCGCGTGGGGTAAG+AGG 0.394358 8_2:-4822408 Msa1229180:CDS
TGTTTGCTTTGCTGTACTGC+AGG 0.395507 8_2:-4819454 Msa1229180:three_prime_UTR
CATAATAAATTGGCTGCAAT+AGG 0.395636 8_2:-4820884 Msa1229180:three_prime_UTR
CTGTCCAAATGAAATGGTAT+TGG 0.397342 8_2:+4820573 None:intergenic
TGAAAATAAAGTAGCAGAAA+AGG 0.404059 8_2:-4820007 Msa1229180:three_prime_UTR
ATCACCGTCTTCTCTTCAAC+AGG 0.406089 8_2:+4825352 None:intergenic
CAACTCCCGACCCACATTGT+TGG 0.407711 8_2:-4819826 Msa1229180:three_prime_UTR
GACAGTGATACCCTCTATTT+GGG 0.407780 8_2:-4823702 Msa1229180:CDS
ATAGCTTTATCTTCAACAAC+AGG 0.413355 8_2:+4825262 None:intergenic
GCTCTCATCAAGCTCTTGTT+AGG 0.413863 8_2:-4819425 Msa1229180:three_prime_UTR
CAGAAGAGGGATGTTACGTT+TGG 0.419497 8_2:-4823380 Msa1229180:CDS
TGCATATGTTTCCCAAATAG+AGG 0.423070 8_2:+4823691 None:intergenic
AATAATTACTATGCGAAATC+GGG 0.424824 8_2:+4820132 None:intergenic
TCTGGTAGGGGCACGGGTGG+CGG 0.427281 8_2:-4821135 Msa1229180:CDS
TCACAGTACGGTGATGCTTA+TGG 0.427536 8_2:-4821637 Msa1229180:CDS
GGAAGATCTAGTCTTGGATA+TGG 0.430356 8_2:-4821514 Msa1229180:CDS
GAAGTCGTGCTCCGCCAATC+AGG 0.430648 8_2:-4822380 Msa1229180:CDS
TTAATTAAATTATTAAATGC+AGG 0.434111 8_2:+4819539 None:intergenic
GCAAATGAACCAACATAAAT+CGG 0.435326 8_2:-4819916 Msa1229180:three_prime_UTR
GAGGTGGCCTCTCATACCTT+TGG 0.437240 8_2:+4821956 None:intergenic
CTTGTCAATTCAAGCTATCT+CGG 0.438251 8_2:-4820755 Msa1229180:three_prime_UTR
AGCTTGATTTAGAAAAGCTC+GGG 0.442733 8_2:-4819939 Msa1229180:three_prime_UTR
CTACCCGCTGAACCTCTCTT+TGG 0.444963 8_2:+4825451 None:intergenic
GGGTGGCGGTAGCAGTTACA+TGG 0.445852 8_2:-4821121 Msa1229180:CDS
ATTAATATATTCACTGGGCG+TGG 0.447220 8_2:-4819521 Msa1229180:three_prime_UTR
GACAACCAACGATATGGTTC+GGG 0.447264 8_2:+4819772 None:intergenic
AGACAACCAACGATATGGTT+CGG 0.450861 8_2:+4819771 None:intergenic
CGTTCATATATGCATATGAA+TGG 0.451547 8_2:-4819348 Msa1229180:three_prime_UTR
CTTCAGTAGCATCCTTGTCT+AGG 0.455597 8_2:+4824004 None:intergenic
GTGAACATTTATATCCATAT+AGG 0.457194 8_2:+4819395 None:intergenic
TGATGAGAAGGAAATTGAAC+AGG 0.459626 8_2:-4824274 Msa1229180:CDS
GGTAGTGGCCTACTTCTAAC+TGG 0.460415 8_2:+4822318 None:intergenic
ACTCCAATCGAGCTCTTGAT+TGG 0.460826 8_2:+4821680 None:intergenic
TCTGCTGAATGTATCAAAGT+TGG 0.463094 8_2:-4820498 Msa1229180:three_prime_UTR
GCTCGATTGGAGTATGACTA+TGG 0.463175 8_2:-4821670 Msa1229180:CDS
TGATGCACTTCCTCCTTCAT+GGG 0.463181 8_2:-4822824 Msa1229180:CDS
ATGTATTCTGGTAGGGGCAC+GGG 0.463809 8_2:-4821141 Msa1229180:CDS
TGGTCTCTGTCCAAATGAAA+TGG 0.464020 8_2:+4820567 None:intergenic
GATCTAGCTGGAGGAGGTAG+TGG 0.465085 8_2:+4822303 None:intergenic
AGCATTACTGGTACAGAATT+GGG 0.466603 8_2:-4822658 Msa1229180:CDS
AGTCGGCAGGGCATGAGTTA+TGG 0.470717 8_2:-4821439 Msa1229180:CDS
CAACAATGTGGGTCGGGAGT+TGG 0.472402 8_2:+4819827 None:intergenic
GGTTCGGGATCTTATTATTG+AGG 0.473492 8_2:-4821090 Msa1229180:intron
TTCAGGCCAAAGTGAGGGCT+AGG 0.475005 8_2:-4822551 Msa1229180:intron
ATTGACAAAGAAATCACAAA+TGG 0.476354 8_2:-4819891 Msa1229180:three_prime_UTR
GCTGCTCGTAGAAAGGACTA+TGG 0.479913 8_2:-4822727 Msa1229180:CDS
GAGTATGAACCTGAGGAGTA+TGG 0.481139 8_2:-4824309 Msa1229180:CDS
ATGTGGTGTTACTCCGAGTC+AGG 0.485653 8_2:-4823724 Msa1229180:CDS
TTGGGGTTGTGACTGAGGTC+AGG 0.486683 8_2:-4823954 Msa1229180:CDS
AGCTATCTCGGGTCTTCTCT+AGG 0.487176 8_2:-4820743 Msa1229180:three_prime_UTR
GGTGGATAATCCCTATAAGT+TGG 0.487528 8_2:+4822060 None:intergenic
TTCATCAATGTATTCTGGTA+GGG 0.489027 8_2:-4821148 Msa1229180:CDS
TAACATTATCCACCCACAAA+TGG 0.489703 8_2:+4820612 None:intergenic
ATTATCTTGCAGTCCACCTC+AGG 0.491057 8_2:+4820202 None:intergenic
TTTCATATTCACTTGAGTGA+TGG 0.491336 8_2:+4820025 None:intergenic
TGGGGTGTATAGCAGTCGGC+AGG 0.491775 8_2:-4821452 Msa1229180:CDS
AAACTATGCAGGTTACTAGA+TGG 0.492265 8_2:+4820155 None:intergenic
GGGCGTCCTTCACGATAACT+TGG 0.494376 8_2:+4821913 None:intergenic
TTGTGAAGGAGAGGCGAAAA+CGG 0.494590 8_2:-4824053 Msa1229180:CDS
CCCCGTAGTTTCTCGTCGCG+TGG 0.495353 8_2:-4822417 Msa1229180:CDS
GACAACCAACAATGTGGGTC+GGG 0.497247 8_2:+4819821 None:intergenic
GGTGATTGAAGAAGAGATCA+AGG 0.499484 8_2:-4825335 Msa1229180:CDS
CATGCCAGCTGCTCGTAGAA+AGG 0.501010 8_2:-4822734 Msa1229180:CDS
CGAGGAAAACATGTTGGTCG+TGG 0.504059 8_2:-4822504 Msa1229180:CDS
TAGCTTGATTTAGAAAAGCT+CGG 0.505512 8_2:-4819940 Msa1229180:three_prime_UTR
AAATGTTGAGGATATAACTT+TGG 0.505813 8_2:-4823495 Msa1229180:CDS
GTGGATAATCCCTATAAGTT+GGG 0.506076 8_2:+4822061 None:intergenic
TTGATTTATGATACCATTTG+TGG 0.506608 8_2:-4820625 Msa1229180:three_prime_UTR
CTTCTATCATAAGATCTAGC+TGG 0.506659 8_2:+4822291 None:intergenic
TTAGCATCTTCTACAGCCTC+AGG 0.507277 8_2:+4825220 None:intergenic
AGATGGTCATGATGAAATTG+AGG 0.507610 8_2:-4824163 Msa1229180:CDS
TGTCTATACCAGTTAGAAGT+AGG 0.507727 8_2:-4822326 Msa1229180:CDS
CTTTAGCTTCTGCATTGTAG+TGG 0.508113 8_2:-4820054 Msa1229180:three_prime_UTR
ATTCATCAATGTATTCTGGT+AGG 0.509049 8_2:-4821149 Msa1229180:CDS
TAAATCAAGCTAGGTAGGGT+GGG 0.514078 8_2:+4819951 None:intergenic
GAACTGATAATATTTGCTGC+TGG 0.515056 8_2:-4820251 Msa1229180:three_prime_UTR
GGCATGTACTCATCAAGTTA+TGG 0.517277 8_2:-4821301 Msa1229180:CDS
ACAAATGGTATCATAAATCA+AGG 0.517968 8_2:+4820627 None:intergenic
TTGAAAAGATTGAGCTTGCA+AGG 0.519002 8_2:-4822759 Msa1229180:CDS
ATGAATACACTATTTATGGT+AGG 0.519124 8_2:+4819734 None:intergenic
ACGATAACTTGGATGGGAAG+GGG 0.520335 8_2:+4821924 None:intergenic
TGTCAATGACCGATTTATGT+TGG 0.520554 8_2:+4819907 None:intergenic
TAGTCCTTTCTACGAGCAGC+TGG 0.522172 8_2:+4822730 None:intergenic
TCGCCAATCAAGAGCTCGAT+TGG 0.522669 8_2:-4821683 Msa1229180:CDS
CACGATAACTTGGATGGGAA+GGG 0.522951 8_2:+4821923 None:intergenic
TTGCAGCCAATTTATTATGT+CGG 0.523352 8_2:+4820888 None:intergenic
GTTTGCTTTGCTGTACTGCA+GGG 0.523702 8_2:-4819453 Msa1229180:three_prime_UTR
GGCGGTGATTACGTTTCTCG+TGG 0.524345 8_2:-4821280 Msa1229180:CDS
TTAATATATTCACTGGGCGT+GGG 0.524594 8_2:-4819520 Msa1229180:three_prime_UTR
AAGAGAGGTTCAGCGGGTAG+TGG 0.526935 8_2:-4825448 Msa1229180:CDS
GAAGAAAATGTTGGTGAAGA+AGG 0.528899 8_2:-4824210 Msa1229180:CDS
GGATTATCTTCTTCCACCAC+AGG 0.529137 8_2:+4825283 None:intergenic
CCCCACGCGACGAGAAACTA+CGG 0.529221 8_2:+4822415 None:intergenic
CCTCTCTTTGGCGTCTTCGG+AGG 0.529474 8_2:+4825463 None:intergenic
GACGAGAAACTACGGGGTGC+AGG 0.529835 8_2:+4822423 None:intergenic
TGATGAAATTGAGGGAGAAG+AGG 0.531641 8_2:-4824154 Msa1229180:CDS
TGATTTATGATACCATTTGT+GGG 0.531763 8_2:-4820624 Msa1229180:three_prime_UTR
TTCCTCCCGCTCAGATGCAA+TGG 0.532515 8_2:-4823420 Msa1229180:CDS
AATGTATTCTGGTAGGGGCA+CGG 0.532761 8_2:-4821142 Msa1229180:CDS
TCATATAGTATACATCTTGA+AGG 0.532816 8_2:-4819715 Msa1229180:three_prime_UTR
TTGTCAATTCAAGCTATCTC+GGG 0.532836 8_2:-4820754 Msa1229180:three_prime_UTR
GTCCTTCACGATAACTTGGA+TGG 0.535270 8_2:+4821917 None:intergenic
TGGGTTATTACGGACTGACT+TGG 0.535832 8_2:-4819501 Msa1229180:three_prime_UTR
CTAAATCAAGCTAGGTAGGG+TGG 0.535850 8_2:+4819950 None:intergenic
TCTAGTCTTGGATATGGTAG+TGG 0.536113 8_2:-4821508 Msa1229180:CDS
GAAGGAAATTGAACAGGAAG+AGG 0.536425 8_2:-4824268 Msa1229180:CDS
TGAGGTGGGAGATGAAGTTG+AGG 0.536948 8_2:-4824241 Msa1229180:CDS
TTTCCTCGGCCTCTCTGAAG+TGG 0.538452 8_2:+4822519 None:intergenic
ATCTCGGGTCTTCTCTAGGT+GGG 0.538541 8_2:-4820739 Msa1229180:three_prime_UTR
AAATCAAGCTAGGTAGGGTG+GGG 0.539434 8_2:+4819952 None:intergenic
GGTGGCAGTGCTTCACAGTA+CGG 0.540610 8_2:-4821649 Msa1229180:CDS
TTTGACAGAAGATGAAGAGG+AGG 0.540760 8_2:-4824394 Msa1229180:intron
ATAACATCCATAAGCTTCAA+AGG 0.541184 8_2:+4820854 None:intergenic
TCCTTCACGATAACTTGGAT+GGG 0.541440 8_2:+4821918 None:intergenic
TGACCGTGAGCGTGCGGAGA+TGG 0.541802 8_2:-4824106 Msa1229180:CDS
GGATGACGAGCATGCTGATG+AGG 0.542036 8_2:-4824133 Msa1229180:CDS
ACAAGTAGCATCTCTAGCCT+TGG 0.543111 8_2:+4820547 None:intergenic
GGCATCCATTGCATCTGAGC+GGG 0.544260 8_2:+4823415 None:intergenic
AAGTGAGGGCTAGGTTATCA+AGG 0.544468 8_2:-4822542 Msa1229180:CDS
TCATCCACGTAACCTCTCCT+AGG 0.544554 8_2:+4821988 None:intergenic
TGAATACACTATTTATGGTA+GGG 0.545218 8_2:+4819735 None:intergenic
AGGCCACTTCAGAGAGGCCG+AGG 0.545426 8_2:-4822522 Msa1229180:CDS
CTAGCACTGATAGACCTGAT+TGG 0.546036 8_2:+4822366 None:intergenic
ATATGGTTCGGGAGTTGGAA+AGG 0.546047 8_2:+4819783 None:intergenic
ACGCCAAAGAGAGGTTCAGC+GGG 0.548771 8_2:-4825454 Msa1229180:CDS
TTTAGCTTCTGCATTGTAGT+GGG 0.549715 8_2:-4820053 Msa1229180:three_prime_UTR
GCAGCAACTCTACTTCTTGG+AGG 0.550856 8_2:+4822117 None:intergenic
GCGAAATCGGGAAACTATGC+AGG 0.552820 8_2:+4820144 None:intergenic
GCAGGTCGGCTGCTCCAAGA+AGG 0.553373 8_2:+4822441 None:intergenic
CCTTTAAGAGACTGCAGAAG+AGG 0.553892 8_2:-4823394 Msa1229180:CDS
TGATAACCTAGCCCTCACTT+TGG 0.554695 8_2:+4822545 None:intergenic
AGCGGGTAGTGGTTCAAAGA+GGG 0.555066 8_2:-4825437 Msa1229180:CDS
GCATATGTTTCCCAAATAGA+GGG 0.556114 8_2:+4823692 None:intergenic
CGATAACTTGGATGGGAAGG+GGG 0.557684 8_2:+4821925 None:intergenic
TTTCTAAATCAAGCTAGGTA+GGG 0.557945 8_2:+4819947 None:intergenic
TAAAATGAATACTTATGCAT+AGG 0.558067 8_2:+4819579 None:intergenic
GGGGACTATCGCCCGAGTCG+CGG 0.559741 8_2:-4822483 Msa1229180:CDS
GTGTTGTAGGATTTGTGACA+TGG 0.559819 8_2:-4820303 Msa1229180:three_prime_UTR
ACGGTGATGCTTATGGTGAT+AGG 0.560365 8_2:-4821630 Msa1229180:intron
ACAAGGGATTTGCATTCTTG+CGG 0.561118 8_2:-4823903 Msa1229180:CDS
CAGCACGAGCAGTACTTCTA+GGG 0.561773 8_2:+4822013 None:intergenic
TCACGATAACTTGGATGGGA+AGG 0.562072 8_2:+4821922 None:intergenic
TCATCAATGTATTCTGGTAG+GGG 0.563889 8_2:-4821147 Msa1229180:CDS
TCTTATGATAGAAGACCAGC+TGG 0.564284 8_2:-4822282 Msa1229180:intron
ACAGGAAGAGGGACATGAGG+TGG 0.565462 8_2:-4824256 Msa1229180:CDS
TATGGTTCGGGAGTTGGAAA+GGG 0.565701 8_2:+4819784 None:intergenic
AGACGAGCGTCTAGATTTGG+AGG 0.566469 8_2:-4824343 Msa1229180:CDS
TTGCTGCAGATTATGGATCA+AGG 0.567085 8_2:-4822101 Msa1229180:CDS
GGCGAGGAAGAAGTCGAAGA+TGG 0.567156 8_2:-4824180 Msa1229180:CDS
AGGAGAGGTTACGTGGATGA+TGG 0.568734 8_2:-4821985 Msa1229180:CDS
GGGTGATGAAATTATGTCAC+AGG 0.569604 8_2:-4823309 Msa1229180:intron
AGAATTTGAAGTATTTGTTG+GGG 0.569779 8_2:-4824028 Msa1229180:CDS
AGCAGCATCGTGTGAGCCAA+AGG 0.572202 8_2:+4822696 None:intergenic
TATGGCGGTAATGATGTTGG+AGG 0.573247 8_2:-4821322 Msa1229180:CDS
TCAACCCCACCATACTCCTC+AGG 0.573263 8_2:+4824300 None:intergenic
CAACTCCCGAACCATATCGT+TGG 0.573646 8_2:-4819777 Msa1229180:three_prime_UTR
GTTCCTGTGATGTAGGTTGG+TGG 0.574215 8_2:-4821180 Msa1229180:intron
GATGGTCATGATGAAATTGA+GGG 0.574247 8_2:-4824162 Msa1229180:CDS
TGCAGAAGCTAAAGATTCTG+TGG 0.576513 8_2:+4820063 None:intergenic
TGGAGTTGATAAGCCTGCAA+AGG 0.576604 8_2:-4823360 Msa1229180:CDS
AGAAGAGAATCTCGTTGTTG+AGG 0.578538 8_2:-4825311 Msa1229180:CDS
ATTCTTGCGGTTTGAAAATG+TGG 0.580185 8_2:-4823890 Msa1229180:CDS
TATTCTGGTAGGGGCACGGG+TGG 0.580301 8_2:-4821138 Msa1229180:CDS
AGCAGTTACATGGGCAGCGG+TGG 0.581899 8_2:-4821111 Msa1229180:CDS
TTGATTAAAGTGCAATCGAA+CGG 0.582634 8_2:+4819200 None:intergenic
GGACTCAAGTTAGTGAGCGA+TGG 0.582663 8_2:-4820684 Msa1229180:three_prime_UTR
CTTCTTTCAGGCCAAAGTGA+GGG 0.583789 8_2:-4822556 Msa1229180:intron
GAGGAAAACATGTTGGTCGT+GGG 0.584426 8_2:-4822503 Msa1229180:CDS
TCTTCTTTCAGGCCAAAGTG+AGG 0.584613 8_2:-4822557 Msa1229180:intron
ATAAGTTGGGCGTCTTTCAG+AGG 0.585266 8_2:+4822074 None:intergenic
TCTTATGGCGGTAATGATGT+TGG 0.585997 8_2:-4821325 Msa1229180:CDS
GGTAGCAGTTACATGGGCAG+CGG 0.586041 8_2:-4821114 Msa1229180:CDS
AGTATACATCTTGAAGGAGG+AGG 0.586205 8_2:-4819709 Msa1229180:three_prime_UTR
GCGTGCGGAGATGGCTGATG+TGG 0.586432 8_2:-4824097 Msa1229180:CDS
CTTTAAGAGACTGCAGAAGA+GGG 0.587293 8_2:-4823393 Msa1229180:CDS
ATTCCAAGAATGCAAATCCA+CGG 0.588526 8_2:+4823444 None:intergenic
ATTATTGCAGATCCGCGACT+CGG 0.588971 8_2:+4822471 None:intergenic
TGAATGTACTTCATGCACCC+TGG 0.589383 8_2:-4819982 Msa1229180:three_prime_UTR
ATGAACCTGAGGAGTATGGT+GGG 0.592467 8_2:-4824305 Msa1229180:CDS
CTAACTGGTATAGACATGAC+AGG 0.592654 8_2:+4822333 None:intergenic
TTCCGATCAGGCTCTTATGG+CGG 0.592662 8_2:-4821337 Msa1229180:intron
TCATAAGATCTAGCTGGAGG+AGG 0.592974 8_2:+4822297 None:intergenic
TTATGGAGTTACAAATGTTG+AGG 0.593298 8_2:-4823507 Msa1229180:CDS
GCAACTCTACTTCTTGGAGG+TGG 0.594233 8_2:+4822120 None:intergenic
TACTCCTCAGGTTCATACTC+AGG 0.594399 8_2:+4824312 None:intergenic
ATTTAATTAATATATTCACT+GGG 0.594789 8_2:-4819526 Msa1229180:three_prime_UTR
CACATGGGGTGTATAGCAGT+CGG 0.596161 8_2:-4821456 Msa1229180:CDS
CGGCAGGGCATGAGTTATGG+TGG 0.596513 8_2:-4821436 Msa1229180:CDS
AGGGTATCACTGTCCTGACT+CGG 0.597119 8_2:+4823711 None:intergenic
TTATTGCAGATCCGCGACTC+GGG 0.598224 8_2:+4822472 None:intergenic
CTTGACCAGAAATAGAACTT+CGG 0.598989 8_2:+4821482 None:intergenic
ATTTCTGGTCAAGATTCACA+TGG 0.599253 8_2:-4821472 Msa1229180:CDS
AATCAAGCTAGGTAGGGTGG+GGG 0.600211 8_2:+4819953 None:intergenic
ATCGTGAAGTTGTGAAGGAG+AGG 0.601698 8_2:-4824062 Msa1229180:CDS
CAGCGGGTAGTGGTTCAAAG+AGG 0.603447 8_2:-4825438 Msa1229180:CDS
TGGGAAACATATGCAAAACA+TGG 0.603494 8_2:-4823683 Msa1229180:CDS
GGAACATCGTGAAGTTGTGA+AGG 0.603844 8_2:-4824067 Msa1229180:CDS
GAAGAACCTGAAGAAAATGT+TGG 0.605476 8_2:-4824219 Msa1229180:CDS
TGATTGGCGAGCACCAGTAT+CGG 0.605757 8_2:+4821696 None:intergenic
AGAGTCGGAAGATCTAGTCT+TGG 0.608797 8_2:-4821520 Msa1229180:CDS
CCGTAGTTTCTCGTCGCGTG+GGG 0.609247 8_2:-4822415 Msa1229180:CDS
AGACAACCAACAATGTGGGT+CGG 0.609812 8_2:+4819820 None:intergenic
CCTCCGAAGACGCCAAAGAG+AGG 0.610557 8_2:-4825463 Msa1229180:CDS
TGGATGATGGTTACAGCCAA+AGG 0.611800 8_2:-4821972 Msa1229180:CDS
CAGGAAGAGGGACATGAGGT+GGG 0.612912 8_2:-4824255 Msa1229180:CDS
CAGATTAATGGAAAACAATG+TGG 0.614039 8_2:-4823741 Msa1229180:CDS
ATCCATTGCATCTGAGCGGG+AGG 0.615124 8_2:+4823418 None:intergenic
TACTGAAGATGATCTGAGGA+AGG 0.616779 8_2:-4823989 Msa1229180:CDS
ACATAATCTTCATCCCATGA+AGG 0.617754 8_2:+4822811 None:intergenic
TCCCATCCAAGTTATCGTGA+AGG 0.617871 8_2:-4821919 Msa1229180:CDS
TGAACCTGTTGAAGAGAAGA+CGG 0.620053 8_2:-4825356 Msa1229180:CDS
GCGGGTAGTGGTTCAAAGAG+GGG 0.620078 8_2:-4825436 Msa1229180:CDS
TATCTCGGGTCTTCTCTAGG+TGG 0.620442 8_2:-4820740 Msa1229180:three_prime_UTR
ATCAAGCTAGGTAGGGTGGG+GGG 0.620776 8_2:+4819954 None:intergenic
TTTCATTTGGACAGAGACCA+AGG 0.620910 8_2:-4820564 Msa1229180:three_prime_UTR
GCACTGATAGACCTGATTGG+CGG 0.621354 8_2:+4822369 None:intergenic
TATGAATCAAATTGCTCCTG+AGG 0.621990 8_2:-4825236 Msa1229180:CDS
GGAGCATGACCGTGAGCGTG+CGG 0.623217 8_2:-4824112 Msa1229180:CDS
TGGGGTTGACTATGATGAGA+AGG 0.623447 8_2:-4824286 Msa1229180:CDS
AGAGGCCGAGGAAAACATGT+TGG 0.624816 8_2:-4822510 Msa1229180:CDS
TTTCTGGTCAAGATTCACAT+GGG 0.629433 8_2:-4821471 Msa1229180:CDS
AAGGAAATTGAACAGGAAGA+GGG 0.629624 8_2:-4824267 Msa1229180:CDS
CTCAAGACAACCAACAATGT+GGG 0.630768 8_2:+4819816 None:intergenic
GTGTGAAGAGAGATTATGGT+CGG 0.631539 8_2:-4822155 Msa1229180:CDS
AGAAACTACGGGGTGCAGGT+CGG 0.632474 8_2:+4822427 None:intergenic
TGAAGTTGGGGTTGTGACTG+AGG 0.635514 8_2:-4823959 Msa1229180:CDS
CAGGGCATGAGTTATGGTGG+AGG 0.638372 8_2:-4821433 Msa1229180:intron
AATTGGCTGCAATAGGATGA+CGG 0.638558 8_2:-4820877 Msa1229180:three_prime_UTR
GTTACAGCCAAAGGTATGAG+AGG 0.639419 8_2:-4821963 Msa1229180:CDS
GTACTGCTCGTGCTGCACCT+AGG 0.640481 8_2:-4822005 Msa1229180:CDS
AATGATAAAGGAACAAACCG+TGG 0.644326 8_2:-4823461 Msa1229180:CDS
ACTCAAGACAACCAACAATG+TGG 0.644646 8_2:+4819815 None:intergenic
GCGGATCTGCAATAATGTCA+AGG 0.645997 8_2:-4822464 Msa1229180:CDS
GATGGCTGATGTGGATGAAG+AGG 0.646717 8_2:-4824088 Msa1229180:CDS
CATATGCAAAACATGGACAA+AGG 0.647157 8_2:-4823676 Msa1229180:CDS
AGGAAAACATGTTGGTCGTG+GGG 0.647706 8_2:-4822502 Msa1229180:CDS
TGATCCTGAGTATGAACCTG+AGG 0.648209 8_2:-4824316 Msa1229180:CDS
GACGCCAAAGAGAGGTTCAG+CGG 0.648754 8_2:-4825455 Msa1229180:CDS
GCTCGTGCTGCACCTAGGAG+AGG 0.649097 8_2:-4822000 Msa1229180:CDS
ACTGGTACAGAATTGGGTGA+AGG 0.649153 8_2:-4822652 Msa1229180:CDS
ATGCTACTGAAGATGATCTG+AGG 0.650341 8_2:-4823993 Msa1229180:CDS
TATAGTATACATCTTGAAGG+AGG 0.651097 8_2:-4819712 Msa1229180:three_prime_UTR
GATTAAAGTGCAATCGAACG+GGG 0.653360 8_2:+4819202 None:intergenic
TAATCTTCATCCCATGAAGG+AGG 0.656027 8_2:+4822814 None:intergenic
TGAACAGGAAGAGGGACATG+AGG 0.656320 8_2:-4824259 Msa1229180:CDS
GGGGTGTATAGCAGTCGGCA+GGG 0.660281 8_2:-4821451 Msa1229180:CDS
GGTGGCGGTAGCAGTTACAT+GGG 0.660439 8_2:-4821120 Msa1229180:CDS
TGCACCTAGGAGAGGTTACG+TGG 0.661010 8_2:-4821992 Msa1229180:CDS
GAATTTGAAGTATTTGTTGG+GGG 0.661371 8_2:-4824027 Msa1229180:CDS
CTATCATAAGATCTAGCTGG+AGG 0.665556 8_2:+4822294 None:intergenic
TTCTGGTCAAGATTCACATG+GGG 0.667528 8_2:-4821470 Msa1229180:CDS
TATAGGGATTATCCACCTCG+TGG 0.670506 8_2:-4822054 Msa1229180:CDS
CCAGTATCGGCGTATCTTGG+GGG 0.678120 8_2:+4821709 None:intergenic
CGATTGGAGTATGACTATGG+TGG 0.680575 8_2:-4821667 Msa1229180:CDS
TATGAACCTGAGGAGTATGG+TGG 0.681041 8_2:-4824306 Msa1229180:CDS
GAGTAGTCAGATCCACGAGG+TGG 0.682031 8_2:+4822042 None:intergenic
TCTTCTGAAGAAATATGGCG+AGG 0.682225 8_2:-4822782 Msa1229180:CDS
GTGACATAATTTCATCACCC+GGG 0.686563 8_2:+4823312 None:intergenic
TGAAGAAGGTGATTCAGGCG+AGG 0.686633 8_2:-4824196 Msa1229180:CDS
ATGTACTCATCAAGTTATGG+CGG 0.691988 8_2:-4821298 Msa1229180:CDS
CATGGGATGAAGATTATGTG+CGG 0.692942 8_2:-4822807 Msa1229180:CDS
GGTAGTGGTTCAAAGAGGGG+TGG 0.693327 8_2:-4825433 Msa1229180:CDS
TTTATGATACCATTTGTGGG+TGG 0.694018 8_2:-4820621 Msa1229180:three_prime_UTR
TGTGACATAATTTCATCACC+CGG 0.700332 8_2:+4823311 None:intergenic
AGGCATCCATTGCATCTGAG+CGG 0.701954 8_2:+4823414 None:intergenic
GATAGAGAATCATAATCACG+AGG 0.709014 8_2:+4821892 None:intergenic
GCTTGATTTAGAAAAGCTCG+GGG 0.709373 8_2:-4819938 Msa1229180:three_prime_UTR
TAACTGGTATAGACATGACA+GGG 0.713524 8_2:+4822334 None:intergenic
AGGGGTGGCAGATTATCGAG+AGG 0.718242 8_2:-4825418 Msa1229180:CDS
GCAAAGCAAACAGAACAGTG+TGG 0.727441 8_2:+4819465 None:intergenic
ATAGAGAATCATAATCACGA+GGG 0.739313 8_2:+4821893 None:intergenic
TGAACCTGAGGAGTATGGTG+GGG 0.741917 8_2:-4824304 Msa1229180:CDS
TTATCAAGGCCACTTCAGAG+AGG 0.757296 8_2:-4822528 Msa1229180:CDS
TCAGAGTAGTCAGATCCACG+AGG 0.788482 8_2:+4822039 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAAAAATCTTACTTT+TGG + chr8_2:4819619-4819638 None:intergenic 10.0%
!!! AAAGTTAACTTTTTAAATTA+TGG - chr8_2:4819659-4819678 Msa1229180:three_prime_UTR 10.0%
!!! ATTTTGTATGAATTATTTTT+CGG - chr8_2:4820083-4820102 Msa1229180:three_prime_UTR 10.0%
!!! TTATTATGAATTTACTTTTA+AGG - chr8_2:4821828-4821847 Msa1229180:intron 10.0%
!!! TATTATGAATTTACTTTTAA+GGG - chr8_2:4821829-4821848 Msa1229180:intron 10.0%
!! TTAATTAAATTATTAAATGC+AGG + chr8_2:4825272-4825291 None:intergenic 10.0%
!! AATTTAATTAATATATTCAC+TGG - chr8_2:4825281-4825300 Msa1229180:CDS 10.0%
!! ATTTAATTAATATATTCACT+GGG - chr8_2:4825282-4825301 Msa1229180:CDS 10.0%
!!! TTAAATTGTTTATGGATTAT+TGG - chr8_2:4819778-4819797 Msa1229180:three_prime_UTR 15.0%
!!! TAAATTGTTTATGGATTATT+GGG - chr8_2:4819779-4819798 Msa1229180:three_prime_UTR 15.0%
!!! TATGGTAATTGTAATTTTTA+AGG - chr8_2:4819827-4819846 Msa1229180:three_prime_UTR 15.0%
!!! AAAAAAAATTGTTACTTTTG+TGG - chr8_2:4821777-4821796 Msa1229180:intron 15.0%
!!! ACTTTCATTTATTATTTCTT+AGG - chr8_2:4822579-4822598 Msa1229180:intron 15.0%
!! CTATTTATAGCATTATATTT+GGG - chr8_2:4824009-4824028 Msa1229180:CDS 15.0%
!!! ATTTTATTATTACATTCAAG+AGG - chr8_2:4824951-4824970 Msa1229180:intron 15.0%
!!! TTTTATTATTACATTCAAGA+GGG - chr8_2:4824952-4824971 Msa1229180:intron 15.0%
!!! TAAATTTTTGAGAGAGAATT+GGG + chr8_2:4819242-4819261 None:intergenic 20.0%
!! AATTCTCTCTCAAAAATTTA+GGG - chr8_2:4819242-4819261 Msa1229180:three_prime_UTR 20.0%
!!! AAATTGTTTATGGATTATTG+GGG - chr8_2:4819780-4819799 Msa1229180:three_prime_UTR 20.0%
!!! AAATTTTAAGGGTTTGAATA+TGG - chr8_2:4819809-4819828 Msa1229180:three_prime_UTR 20.0%
!!! AGTTTATATTGTTTTGTTGT+AGG - chr8_2:4819870-4819889 Msa1229180:three_prime_UTR 20.0%
!! TATAATTCATCATTAGATGA+AGG - chr8_2:4819944-4819963 Msa1229180:three_prime_UTR 20.0%
!!! AAAGAATTTGAAGTATTTGT+TGG - chr8_2:4820778-4820797 Msa1229180:three_prime_UTR 20.0%
!!! AAGAATTTGAAGTATTTGTT+GGG - chr8_2:4820779-4820798 Msa1229180:three_prime_UTR 20.0%
!!! TTTTTTGAAGGTTTTTTAAG+CGG - chr8_2:4821550-4821569 Msa1229180:intron 20.0%
!! AAAATTTGATCAGTAAAATG+AGG + chr8_2:4821936-4821955 None:intergenic 20.0%
!!! GATCAAATTTTTCAAATTTC+AGG - chr8_2:4821945-4821964 Msa1229180:CDS 20.0%
!! AAAATGTAAGAATGAATTAC+AGG + chr8_2:4823261-4823280 None:intergenic 20.0%
!! GCTATTTATAGCATTATATT+TGG - chr8_2:4824008-4824027 Msa1229180:CDS 20.0%
!!! AAGTCAAAAGATGATTTTTT+TGG - chr8_2:4824473-4824492 Msa1229180:intron 20.0%
!!! AGTCAAAAGATGATTTTTTT+GGG - chr8_2:4824474-4824493 Msa1229180:intron 20.0%
!! AAATAATTACTATGCGAAAT+CGG + chr8_2:4824680-4824699 None:intergenic 20.0%
!! CTATATGAATACACTATTTA+TGG + chr8_2:4825081-4825100 None:intergenic 20.0%
!! TAAAATGAATACTTATGCAT+AGG + chr8_2:4825232-4825251 None:intergenic 20.0%
!!! CTAAATTTTTGAGAGAGAAT+TGG + chr8_2:4819243-4819262 None:intergenic 25.0%
! CAATTCTCTCTCAAAAATTT+AGG - chr8_2:4819241-4819260 Msa1229180:three_prime_UTR 25.0%
! TGGGTTGTTTAAATTGTTTA+TGG - chr8_2:4819770-4819789 Msa1229180:three_prime_UTR 25.0%
!!! TTGGGGTTTTTGAAATTTTA+AGG - chr8_2:4819797-4819816 Msa1229180:three_prime_UTR 25.0%
!!! TGGGGTTTTTGAAATTTTAA+GGG - chr8_2:4819798-4819817 Msa1229180:three_prime_UTR 25.0%
!!! TATTGTTTTGTTGTAGGAAA+AGG - chr8_2:4819876-4819895 Msa1229180:three_prime_UTR 25.0%
!! TGTTATCGCTTCTTTTATTA+TGG - chr8_2:4819998-4820017 Msa1229180:three_prime_UTR 25.0%
! TTATGTGTTTGTGTTATGTT+TGG - chr8_2:4820111-4820130 Msa1229180:three_prime_UTR 25.0%
!!! AATCATGAAGTGGTTTTAAA+TGG - chr8_2:4820141-4820160 Msa1229180:three_prime_UTR 25.0%
!!! ATCATGAAGTGGTTTTAAAT+GGG - chr8_2:4820142-4820161 Msa1229180:three_prime_UTR 25.0%
! AAAATAGTACAGGTTTCAAT+TGG + chr8_2:4820395-4820414 None:intergenic 25.0%
!! AGAATTTGAAGTATTTGTTG+GGG - chr8_2:4820780-4820799 Msa1229180:three_prime_UTR 25.0%
! AAATGTTGAGGATATAACTT+TGG - chr8_2:4821313-4821332 Msa1229180:CDS 25.0%
! GTAGAAGATTCTAATGATAA+AGG - chr8_2:4821335-4821354 Msa1229180:intron 25.0%
!! TTTTCTGAATAGAAATTCCT+TGG - chr8_2:4821525-4821544 Msa1229180:intron 25.0%
! TTTCTGAATAGAAATTCCTT+GGG - chr8_2:4821526-4821545 Msa1229180:intron 25.0%
!! AGTTTGAAATTGTAATCATG+TGG - chr8_2:4821685-4821704 Msa1229180:CDS 25.0%
!! GTTTGAAATTGTAATCATGT+GGG - chr8_2:4821686-4821705 Msa1229180:CDS 25.0%
! TGTAAAAACTGGAAAATTGT+GGG + chr8_2:4821721-4821740 None:intergenic 25.0%
! ATGTAAAAACTGGAAAATTG+TGG + chr8_2:4821722-4821741 None:intergenic 25.0%
! TTTCTCATCCTAAAATATAC+CGG + chr8_2:4821871-4821890 None:intergenic 25.0%
! ATGAATTACAGGACAAAAAA+AGG + chr8_2:4823250-4823269 None:intergenic 25.0%
!!! TACATTTTGATTTGTAGAGT+CGG - chr8_2:4823273-4823292 Msa1229180:intron 25.0%
!! TTTATTATGTTTTTCCGATC+AGG - chr8_2:4823459-4823478 Msa1229180:CDS 25.0%
! TCATATTCATCAATGTATTC+TGG - chr8_2:4823655-4823674 Msa1229180:intron 25.0%
!! TATAAGTGGATGTATTTTTC+TGG - chr8_2:4823800-4823819 Msa1229180:intron 25.0%
! ATGTTATGAAGCTTACAATT+TGG - chr8_2:4823970-4823989 Msa1229180:CDS 25.0%
! GTTATTGAATTTGTGATGTA+TGG - chr8_2:4824103-4824122 Msa1229180:CDS 25.0%
! ACAAATGGTATCATAAATCA+AGG + chr8_2:4824184-4824203 None:intergenic 25.0%
! TTGATTTATGATACCATTTG+TGG - chr8_2:4824183-4824202 Msa1229180:CDS 25.0%
! TGATTTATGATACCATTTGT+GGG - chr8_2:4824184-4824203 Msa1229180:CDS 25.0%
! AAAGAGATGTTTAGTTACTT+TGG - chr8_2:4824353-4824372 Msa1229180:CDS 25.0%
! AGTAATAAGAATACTACTTC+AGG - chr8_2:4824442-4824461 Msa1229180:intron 25.0%
!!! ATCATGCTTTTTACTTTCTT+AGG + chr8_2:4824537-4824556 None:intergenic 25.0%
! AATAATTACTATGCGAAATC+GGG + chr8_2:4824679-4824698 None:intergenic 25.0%
! TGAAAATAAAGTAGCAGAAA+AGG - chr8_2:4824801-4824820 Msa1229180:intron 25.0%
! ATTGACAAAGAAATCACAAA+TGG - chr8_2:4824917-4824936 Msa1229180:intron 25.0%
! TGAATACACTATTTATGGTA+GGG + chr8_2:4825076-4825095 None:intergenic 25.0%
! ATGAATACACTATTTATGGT+AGG + chr8_2:4825077-4825096 None:intergenic 25.0%
! TCATATAGTATACATCTTGA+AGG - chr8_2:4825093-4825112 Msa1229180:intron 25.0%
!! ATTCATTTTATTGCATCTTG+TGG - chr8_2:4825242-4825261 Msa1229180:CDS 25.0%
! GTGAACATTTATATCCATAT+AGG + chr8_2:4825416-4825435 None:intergenic 25.0%
!!! TTCTTTCAATTTGCTATCAT+TGG - chr8_2:4825506-4825525 Msa1229180:five_prime_UTR 25.0%
!! ATAGCTTTATCTTCAACAAC+AGG + chr8_2:4819549-4819568 None:intergenic 30.0%
TGAAATTATAGCGAAAAGTG+AGG - chr8_2:4819712-4819731 Msa1229180:three_prime_UTR 30.0%
TATGGTTGTTGCAATTGAAT+AGG - chr8_2:4820016-4820035 Msa1229180:three_prime_UTR 30.0%
! ATGTTGTCAAATATTGGTTG+TGG - chr8_2:4820179-4820198 Msa1229180:three_prime_UTR 30.0%
! CATAGCAAAAGAAGGATTTT+AGG - chr8_2:4820254-4820273 Msa1229180:three_prime_UTR 30.0%
ATCCACAACAATGTTATCAA+TGG + chr8_2:4820287-4820306 None:intergenic 30.0%
CATTGTGCAATGATTGAATA+TGG - chr8_2:4820308-4820327 Msa1229180:three_prime_UTR 30.0%
!!! AAAGTTAAGTCTGTTTTGAC+TGG - chr8_2:4820367-4820386 Msa1229180:three_prime_UTR 30.0%
!!! AAGTTAAGTCTGTTTTGACT+GGG - chr8_2:4820368-4820387 Msa1229180:three_prime_UTR 30.0%
CTTCTGTCAAAAAATAGTAC+AGG + chr8_2:4820405-4820424 None:intergenic 30.0%
!!! TTTTTTGACAGAAGATGAAG+AGG - chr8_2:4820411-4820430 Msa1229180:three_prime_UTR 30.0%
! GAATTTGAAGTATTTGTTGG+GGG - chr8_2:4820781-4820800 Msa1229180:three_prime_UTR 30.0%
TGACTTCTCAATAATAGAGT+AGG - chr8_2:4820990-4821009 Msa1229180:intron 30.0%
CAGATTAATGGAAAACAATG+TGG - chr8_2:4821067-4821086 Msa1229180:intron 30.0%
GCTGAATTTATGACTGTTAA+TGG - chr8_2:4821243-4821262 Msa1229180:intron 30.0%
TTATGGAGTTACAAATGTTG+AGG - chr8_2:4821301-4821320 Msa1229180:CDS 30.0%
!!! AATTCCTTGGGTTTTTTTGA+AGG - chr8_2:4821538-4821557 Msa1229180:intron 30.0%
AAAACCTTCAAAAAAACCCA+AGG + chr8_2:4821545-4821564 None:intergenic 30.0%
TAATGCTTTCATCTTCTTTC+AGG - chr8_2:4822240-4822259 Msa1229180:intron 30.0%
ATAGAGAATCATAATCACGA+GGG + chr8_2:4822918-4822937 None:intergenic 30.0%
ACAGGACAAAAAAAGGATTA+GGG + chr8_2:4823243-4823262 None:intergenic 30.0%
TACAGGACAAAAAAAGGATT+AGG + chr8_2:4823244-4823263 None:intergenic 30.0%
ATTCATCAATGTATTCTGGT+AGG - chr8_2:4823659-4823678 Msa1229180:intron 30.0%
TTCATCAATGTATTCTGGTA+GGG - chr8_2:4823660-4823679 Msa1229180:intron 30.0%
TGTGCTTTGTGTATTACATT+AGG - chr8_2:4823767-4823786 Msa1229180:intron 30.0%
!! AGATTTTGCTATACTCGAAA+TGG - chr8_2:4823823-4823842 Msa1229180:intron 30.0%
ACAGATCCGACATAATAAAT+TGG - chr8_2:4823914-4823933 Msa1229180:CDS 30.0%
TTGCAGCCAATTTATTATGT+CGG + chr8_2:4823923-4823942 None:intergenic 30.0%
CATAATAAATTGGCTGCAAT+AGG - chr8_2:4823924-4823943 Msa1229180:CDS 30.0%
ATAACATCCATAAGCTTCAA+AGG + chr8_2:4823957-4823976 None:intergenic 30.0%
CTTGTTTGGTTAAGGATTAA+TGG - chr8_2:4824279-4824298 Msa1229180:CDS 30.0%
!!! ATGATTTTTTTGGGATGTGT+TGG - chr8_2:4824483-4824502 Msa1229180:intron 30.0%
TTTCATATTCACTTGAGTGA+TGG + chr8_2:4824786-4824805 None:intergenic 30.0%
TTTCTAAATCAAGCTAGGTA+GGG + chr8_2:4824864-4824883 None:intergenic 30.0%
! TTTTCTAAATCAAGCTAGGT+AGG + chr8_2:4824865-4824884 None:intergenic 30.0%
TAGCTTGATTTAGAAAAGCT+CGG - chr8_2:4824868-4824887 Msa1229180:intron 30.0%
GCAAATGAACCAACATAAAT+CGG - chr8_2:4824892-4824911 Msa1229180:intron 30.0%
TATAGTATACATCTTGAAGG+AGG - chr8_2:4825096-4825115 Msa1229180:intron 30.0%
TTAAGAAGATATTGCTCGTT+AGG - chr8_2:4825128-4825147 Msa1229180:intron 30.0%
CTCAACATTGCTTAGAAATA+GGG + chr8_2:4825185-4825204 None:intergenic 30.0%
ACTCAACATTGCTTAGAAAT+AGG + chr8_2:4825186-4825205 None:intergenic 30.0%
TGTTAGGTAACATACCTATA+TGG - chr8_2:4825399-4825418 Msa1229180:CDS 30.0%
CGTTCATATATGCATATGAA+TGG - chr8_2:4825460-4825479 Msa1229180:CDS 30.0%
TGCGATCCACAAAGAAATTT+AGG - chr8_2:4819297-4819316 Msa1229180:three_prime_UTR 35.0%
GCGATCCACAAAGAAATTTA+GGG - chr8_2:4819298-4819317 Msa1229180:three_prime_UTR 35.0%
CGAAACCCTAAATTTCTTTG+TGG + chr8_2:4819306-4819325 None:intergenic 35.0%
TATGAATCAAATTGCTCCTG+AGG - chr8_2:4819572-4819591 Msa1229180:three_prime_UTR 35.0%
TTAAATTATGGCGAAAAGCG+AGG - chr8_2:4819671-4819690 Msa1229180:three_prime_UTR 35.0%
AGCGATAACAGCTTACAAAA+AGG + chr8_2:4819988-4820007 None:intergenic 35.0%
TGGTGATATCAATCATGAAG+TGG - chr8_2:4820131-4820150 Msa1229180:three_prime_UTR 35.0%
!!! GGTTTTAAATGGGAATCATG+TGG - chr8_2:4820152-4820171 Msa1229180:three_prime_UTR 35.0%
GGATCGATGTTGTCAAATAT+TGG - chr8_2:4820173-4820192 Msa1229180:three_prime_UTR 35.0%
! ATATTGGTTGTGGCAGATTT+CGG - chr8_2:4820189-4820208 Msa1229180:three_prime_UTR 35.0%
CACAACAATGTTATCAATGG+CGG + chr8_2:4820284-4820303 None:intergenic 35.0%
TGATGAGAAGGAAATTGAAC+AGG - chr8_2:4820534-4820553 Msa1229180:three_prime_UTR 35.0%
AAGGAAATTGAACAGGAAGA+GGG - chr8_2:4820541-4820560 Msa1229180:three_prime_UTR 35.0%
GAAGAACCTGAAGAAAATGT+TGG - chr8_2:4820589-4820608 Msa1229180:three_prime_UTR 35.0%
! TCTTCACCAACATTTTCTTC+AGG + chr8_2:4820598-4820617 None:intergenic 35.0%
! GAAGAAAATGTTGGTGAAGA+AGG - chr8_2:4820598-4820617 Msa1229180:three_prime_UTR 35.0%
AGATGGTCATGATGAAATTG+AGG - chr8_2:4820645-4820664 Msa1229180:three_prime_UTR 35.0%
GATGGTCATGATGAAATTGA+GGG - chr8_2:4820646-4820665 Msa1229180:three_prime_UTR 35.0%
TCCTCAGACAAAAAAGAACA+AGG - chr8_2:4820888-4820907 Msa1229180:three_prime_UTR 35.0%
CCTCAGACAAAAAAGAACAA+GGG - chr8_2:4820889-4820908 Msa1229180:three_prime_UTR 35.0%
ATTCTTGCGGTTTGAAAATG+TGG - chr8_2:4820918-4820937 Msa1229180:intron 35.0%
AGAAGTCAAAGATTACCACT+GGG + chr8_2:4820978-4820997 None:intergenic 35.0%
TCGCTGCAATTTCAGATTAA+TGG - chr8_2:4821055-4821074 Msa1229180:intron 35.0%
GCATATGTTTCCCAAATAGA+GGG + chr8_2:4821119-4821138 None:intergenic 35.0%
TGCATATGTTTCCCAAATAG+AGG + chr8_2:4821120-4821139 None:intergenic 35.0%
TGGGAAACATATGCAAAACA+TGG - chr8_2:4821125-4821144 Msa1229180:CDS 35.0%
CATATGCAAAACATGGACAA+AGG - chr8_2:4821132-4821151 Msa1229180:CDS 35.0%
! AGCTGTAAGTCTAGTTGTTT+TGG - chr8_2:4821156-4821175 Msa1229180:CDS 35.0%
! TCAATGAAGGTGCAAAAAAC+AGG + chr8_2:4821183-4821202 None:intergenic 35.0%
TTGCACCTTCATTGAATTGT+TGG - chr8_2:4821188-4821207 Msa1229180:intron 35.0%
TGCACCTTCATTGAATTGTT+GGG - chr8_2:4821189-4821208 Msa1229180:intron 35.0%
ACAACCCAACAATTCAATGA+AGG + chr8_2:4821196-4821215 None:intergenic 35.0%
TCATAAATTCAGCAGAGTTC+AGG + chr8_2:4821236-4821255 None:intergenic 35.0%
ATGACTGTTAATGGAACTTC+TGG - chr8_2:4821252-4821271 Msa1229180:intron 35.0%
! AAGGAGAAGTTGAAGCATTA+TGG - chr8_2:4821284-4821303 Msa1229180:CDS 35.0%
AATGATAAAGGAACAAACCG+TGG - chr8_2:4821347-4821366 Msa1229180:intron 35.0%
ATTCCAAGAATGCAAATCCA+CGG + chr8_2:4821367-4821386 None:intergenic 35.0%
! TGCAGATTCTTTTATTGACC+CGG - chr8_2:4821478-4821497 Msa1229180:CDS 35.0%
TGTGACATAATTTCATCACC+CGG + chr8_2:4821500-4821519 None:intergenic 35.0%
CAAAATTAACCAACCACTGA+TGG + chr8_2:4821615-4821634 None:intergenic 35.0%
!! CAGTGGTTGGTTAATTTTGT+TGG - chr8_2:4821616-4821635 Msa1229180:intron 35.0%
CACATCACGAATGTAAAAAC+TGG + chr8_2:4821732-4821751 None:intergenic 35.0%
! CAGTTTTTACATTCGTGATG+TGG - chr8_2:4821730-4821749 Msa1229180:intron 35.0%
! ATGACACACCGGTATATTTT+AGG - chr8_2:4821860-4821879 Msa1229180:intron 35.0%
ATGAGAAACTATCCTTCTAG+TGG - chr8_2:4821883-4821902 Msa1229180:CDS 35.0%
GGAATAAATACATCTACACC+TGG + chr8_2:4821915-4821934 None:intergenic 35.0%
ACATAATCTTCATCCCATGA+AGG + chr8_2:4822000-4822019 None:intergenic 35.0%
! CGGAATCTTCTGAAGAAATA+TGG - chr8_2:4822021-4822040 Msa1229180:CDS 35.0%
TTGAAAAGATTGAGCTTGCA+AGG - chr8_2:4822049-4822068 Msa1229180:CDS 35.0%
!! GACTATGGATTTGTTACCTT+TGG - chr8_2:4822096-4822115 Msa1229180:CDS 35.0%
AGCATTACTGGTACAGAATT+GGG - chr8_2:4822150-4822169 Msa1229180:CDS 35.0%
TAACTGGTATAGACATGACA+GGG + chr8_2:4822477-4822496 None:intergenic 35.0%
TGTCTATACCAGTTAGAAGT+AGG - chr8_2:4822482-4822501 Msa1229180:CDS 35.0%
CTTCTATCATAAGATCTAGC+TGG + chr8_2:4822520-4822539 None:intergenic 35.0%
GTGGATAATCCCTATAAGTT+GGG + chr8_2:4822750-4822769 None:intergenic 35.0%
GATAGAGAATCATAATCACG+AGG + chr8_2:4822919-4822938 None:intergenic 35.0%
CGTGATTATGATTCTCTATC+TGG - chr8_2:4822919-4822938 Msa1229180:intron 35.0%
TGCAGAAATAGTACTAACCA+CGG + chr8_2:4822965-4822984 None:intergenic 35.0%
AATGAGATCGTAAACAATGC+AGG + chr8_2:4823006-4823025 None:intergenic 35.0%
!!! TTTGTTTTTTATGCCCAACC+AGG - chr8_2:4823068-4823087 Msa1229180:intron 35.0%
CTTGACCAGAAATAGAACTT+CGG + chr8_2:4823329-4823348 None:intergenic 35.0%
!! ATTTCTGGTCAAGATTCACA+TGG - chr8_2:4823336-4823355 Msa1229180:CDS 35.0%
! TTTCTGGTCAAGATTCACAT+GGG - chr8_2:4823337-4823356 Msa1229180:CDS 35.0%
ATGTACTCATCAAGTTATGG+CGG - chr8_2:4823510-4823529 Msa1229180:CDS 35.0%
ATCTATTGTTCCTGTGATGT+AGG - chr8_2:4823621-4823640 Msa1229180:intron 35.0%
TCATCAATGTATTCTGGTAG+GGG - chr8_2:4823661-4823680 Msa1229180:intron 35.0%
TAGGATGCATTCAGTATAAG+TGG - chr8_2:4823786-4823805 Msa1229180:intron 35.0%
! CATCTCTTATCTTTTCGCAA+GGG - chr8_2:4823846-4823865 Msa1229180:intron 35.0%
CTGTTCATAGACAAATTCAC+TGG + chr8_2:4823898-4823917 None:intergenic 35.0%
CTTGTCAATTCAAGCTATCT+CGG - chr8_2:4824053-4824072 Msa1229180:CDS 35.0%
TTGTCAATTCAAGCTATCTC+GGG - chr8_2:4824054-4824073 Msa1229180:CDS 35.0%
TTTATGATACCATTTGTGGG+TGG - chr8_2:4824187-4824206 Msa1229180:CDS 35.0%
TAACATTATCCACCCACAAA+TGG + chr8_2:4824199-4824218 None:intergenic 35.0%
TGCTCCAATACCATTTCATT+TGG - chr8_2:4824231-4824250 Msa1229180:CDS 35.0%
CTGTCCAAATGAAATGGTAT+TGG + chr8_2:4824238-4824257 None:intergenic 35.0%
! AGATGCTACTTGTTTGGTTA+AGG - chr8_2:4824271-4824290 Msa1229180:CDS 35.0%
TCTGCTGAATGTATCAAAGT+TGG - chr8_2:4824310-4824329 Msa1229180:CDS 35.0%
! GAACTGATAATATTTGCTGC+TGG - chr8_2:4824557-4824576 Msa1229180:intron 35.0%
!! TACTTTGAGTTTTTGTCCTG+AGG - chr8_2:4824590-4824609 Msa1229180:intron 35.0%
AAACTATGCAGGTTACTAGA+TGG + chr8_2:4824656-4824675 None:intergenic 35.0%
! TTTAGCTTCTGCATTGTAGT+GGG - chr8_2:4824755-4824774 Msa1229180:intron 35.0%
! GAGCTTTTCTAAATCAAGCT+AGG + chr8_2:4824869-4824888 None:intergenic 35.0%
AGCTTGATTTAGAAAAGCTC+GGG - chr8_2:4824869-4824888 Msa1229180:intron 35.0%
! TGTCAATGACCGATTTATGT+TGG + chr8_2:4824904-4824923 None:intergenic 35.0%
ATTAATATATTCACTGGGCG+TGG - chr8_2:4825287-4825306 Msa1229180:CDS 35.0%
TTAATATATTCACTGGGCGT+GGG - chr8_2:4825288-4825307 Msa1229180:CDS 35.0%
!! ACTCTAGTTTAGCTCTTGTT+AGG - chr8_2:4825434-4825453 Msa1229180:CDS 35.0%
TGAACCTGTTGAAGAGAAGA+CGG - chr8_2:4819452-4819471 Msa1229180:three_prime_UTR 40.0%
GGTGATTGAAGAAGAGATCA+AGG - chr8_2:4819473-4819492 Msa1229180:three_prime_UTR 40.0%
AGAAGAGAATCTCGTTGTTG+AGG - chr8_2:4819497-4819516 Msa1229180:three_prime_UTR 40.0%
! CGCCATTGATAACATTGTTG+TGG - chr8_2:4820282-4820301 Msa1229180:three_prime_UTR 40.0%
TTTGACAGAAGATGAAGAGG+AGG - chr8_2:4820414-4820433 Msa1229180:three_prime_UTR 40.0%
AGAAGATGAAGAGGAGGTTA+AGG - chr8_2:4820420-4820439 Msa1229180:three_prime_UTR 40.0%
GAAGGAAATTGAACAGGAAG+AGG - chr8_2:4820540-4820559 Msa1229180:three_prime_UTR 40.0%
TGATGAAATTGAGGGAGAAG+AGG - chr8_2:4820654-4820673 Msa1229180:three_prime_UTR 40.0%
ATGCTACTGAAGATGATCTG+AGG - chr8_2:4820815-4820834 Msa1229180:three_prime_UTR 40.0%
TACTGAAGATGATCTGAGGA+AGG - chr8_2:4820819-4820838 Msa1229180:three_prime_UTR 40.0%
! GATGATCTGAGGAAGGTTTT+CGG - chr8_2:4820826-4820845 Msa1229180:three_prime_UTR 40.0%
!!! CCCTTGTTCTTTTTTGTCTG+AGG + chr8_2:4820892-4820911 None:intergenic 40.0%
ACAAGGGATTTGCATTCTTG+CGG - chr8_2:4820905-4820924 Msa1229180:intron 40.0%
GAGAAGTCAAAGATTACCAC+TGG + chr8_2:4820979-4820998 None:intergenic 40.0%
GACAGTGATACCCTCTATTT+GGG - chr8_2:4821106-4821125 Msa1229180:CDS 40.0%
GCTTCAACTTCTCCTTTAAC+TGG + chr8_2:4821280-4821299 None:intergenic 40.0%
AAACCGTGGATTTGCATTCT+TGG - chr8_2:4821361-4821380 Msa1229180:intron 40.0%
! CTTTAAGAGACTGCAGAAGA+GGG - chr8_2:4821415-4821434 Msa1229180:intron 40.0%
TCTGCAAATGAAACCTTTGC+AGG + chr8_2:4821464-4821483 None:intergenic 40.0%
! GCAGATTCTTTTATTGACCC+GGG - chr8_2:4821479-4821498 Msa1229180:CDS 40.0%
GTGACATAATTTCATCACCC+GGG + chr8_2:4821499-4821518 None:intergenic 40.0%
GGGTGATGAAATTATGTCAC+AGG - chr8_2:4821499-4821518 Msa1229180:CDS 40.0%
TAAGCGGAACATGTGTAGAA+TGG - chr8_2:4821566-4821585 Msa1229180:intron 40.0%
ATGAGTTCCAATACCATCAG+TGG - chr8_2:4821599-4821618 Msa1229180:intron 40.0%
TAACCAACCACTGATGGTAT+TGG + chr8_2:4821609-4821628 None:intergenic 40.0%
GAAACTATCCTTCTAGTGGT+TGG - chr8_2:4821887-4821906 Msa1229180:CDS 40.0%
TAATCTTCATCCCATGAAGG+AGG + chr8_2:4821997-4822016 None:intergenic 40.0%
CATGGGATGAAGATTATGTG+CGG - chr8_2:4822001-4822020 Msa1229180:CDS 40.0%
! TCTTCTGAAGAAATATGGCG+AGG - chr8_2:4822026-4822045 Msa1229180:CDS 40.0%
CAGCATTACTGGTACAGAAT+TGG - chr8_2:4822149-4822168 Msa1229180:CDS 40.0%
ATTGGGTGAAGGTGACAAAA+AGG - chr8_2:4822167-4822186 Msa1229180:CDS 40.0%
AATATCTGCGCAGTGAAACA+TGG - chr8_2:4822210-4822229 Msa1229180:intron 40.0%
CAATAATGTCAAGGCCTTCT+TGG - chr8_2:4822353-4822372 Msa1229180:CDS 40.0%
CTAACTGGTATAGACATGAC+AGG + chr8_2:4822478-4822497 None:intergenic 40.0%
CTATCATAAGATCTAGCTGG+AGG + chr8_2:4822517-4822536 None:intergenic 40.0%
TCTTATGATAGAAGACCAGC+TGG - chr8_2:4822526-4822545 Msa1229180:CDS 40.0%
ATTGTACACTACATACCAGC+TGG + chr8_2:4822544-4822563 None:intergenic 40.0%
GCAGCATCTAGAAGACAATA+TGG + chr8_2:4822619-4822638 None:intergenic 40.0%
AGCAGTGTGAAGAGAGATTA+TGG - chr8_2:4822649-4822668 Msa1229180:CDS 40.0%
GTGTGAAGAGAGATTATGGT+CGG - chr8_2:4822653-4822672 Msa1229180:CDS 40.0%
AGTAGAGTTGCTGCAGATTA+TGG - chr8_2:4822700-4822719 Msa1229180:CDS 40.0%
TTGCTGCAGATTATGGATCA+AGG - chr8_2:4822707-4822726 Msa1229180:CDS 40.0%
TGAAAGACGCCCAACTTATA+GGG - chr8_2:4822738-4822757 Msa1229180:CDS 40.0%
GGTGGATAATCCCTATAAGT+TGG + chr8_2:4822751-4822770 None:intergenic 40.0%
TCCTTCACGATAACTTGGAT+GGG + chr8_2:4822893-4822912 None:intergenic 40.0%
!! GGAAGATCTAGTCTTGGATA+TGG - chr8_2:4823294-4823313 Msa1229180:intron 40.0%
!! TCTAGTCTTGGATATGGTAG+TGG - chr8_2:4823300-4823319 Msa1229180:intron 40.0%
TTCTGGTCAAGATTCACATG+GGG - chr8_2:4823338-4823357 Msa1229180:CDS 40.0%
! TTTTTCCGATCAGGCTCTTA+TGG - chr8_2:4823468-4823487 Msa1229180:CDS 40.0%
TCTTATGGCGGTAATGATGT+TGG - chr8_2:4823483-4823502 Msa1229180:CDS 40.0%
GGCATGTACTCATCAAGTTA+TGG - chr8_2:4823507-4823526 Msa1229180:CDS 40.0%
ATTGTTCCTGTGATGTAGGT+TGG - chr8_2:4823625-4823644 Msa1229180:intron 40.0%
GGTTCGGGATCTTATTATTG+AGG - chr8_2:4823718-4823737 Msa1229180:CDS 40.0%
! GCATCTCTTATCTTTTCGCA+AGG - chr8_2:4823845-4823864 Msa1229180:intron 40.0%
AATTGGCTGCAATAGGATGA+CGG - chr8_2:4823931-4823950 Msa1229180:CDS 40.0%
GGGAACTTGTCGCAAAAATT+AGG - chr8_2:4824029-4824048 Msa1229180:CDS 40.0%
TGGTCTCTGTCCAAATGAAA+TGG + chr8_2:4824244-4824263 None:intergenic 40.0%
TTTCATTTGGACAGAGACCA+AGG - chr8_2:4824244-4824263 Msa1229180:CDS 40.0%
GTGTTGTAGGATTTGTGACA+TGG - chr8_2:4824505-4824524 Msa1229180:intron 40.0%
!! TTTGAGTTTTTGTCCTGAGG+TGG - chr8_2:4824593-4824612 Msa1229180:intron 40.0%
TGCAGAAGCTAAAGATTCTG+TGG + chr8_2:4824748-4824767 None:intergenic 40.0%
! CTTTAGCTTCTGCATTGTAG+TGG - chr8_2:4824754-4824773 Msa1229180:intron 40.0%
TAAATCAAGCTAGGTAGGGT+GGG + chr8_2:4824860-4824879 None:intergenic 40.0%
GCTTGATTTAGAAAAGCTCG+GGG - chr8_2:4824870-4824889 Msa1229180:intron 40.0%
CTCAAGACAACCAACAATGT+GGG + chr8_2:4824995-4825014 None:intergenic 40.0%
ACTCAAGACAACCAACAATG+TGG + chr8_2:4824996-4825015 None:intergenic 40.0%
AGACAACCAACGATATGGTT+CGG + chr8_2:4825040-4825059 None:intergenic 40.0%
ACTCAAGACAACCAACGATA+TGG + chr8_2:4825045-4825064 None:intergenic 40.0%
AGTATACATCTTGAAGGAGG+AGG - chr8_2:4825099-4825118 Msa1229180:intron 40.0%
!! GTCTTCGGAGGCATTGTTAT+TGG + chr8_2:4819336-4819355 None:intergenic 45.0%
ATCACCGTCTTCTCTTCAAC+AGG + chr8_2:4819459-4819478 None:intergenic 45.0%
CGTTGTTGAGGAAAAACCTG+TGG - chr8_2:4819509-4819528 Msa1229180:three_prime_UTR 45.0%
TGTTGAGGAAAAACCTGTGG+TGG - chr8_2:4819512-4819531 Msa1229180:three_prime_UTR 45.0%
GGATTATCTTCTTCCACCAC+AGG + chr8_2:4819528-4819547 None:intergenic 45.0%
TTAGCATCTTCTACAGCCTC+AGG + chr8_2:4819591-4819610 None:intergenic 45.0%
AGTTTCTTTGACAACCGCCA+TGG - chr8_2:4820216-4820235 Msa1229180:three_prime_UTR 45.0%
!!! CAACCGCCATGGTGTTTTTT+TGG - chr8_2:4820227-4820246 Msa1229180:three_prime_UTR 45.0%
TGTCCGCCAAAAAAACACCA+TGG + chr8_2:4820236-4820255 None:intergenic 45.0%
! TTGGCGGACATAGCAAAAGA+AGG - chr8_2:4820246-4820265 Msa1229180:three_prime_UTR 45.0%
TGATCCTGAGTATGAACCTG+AGG - chr8_2:4820492-4820511 Msa1229180:three_prime_UTR 45.0%
TACTCCTCAGGTTCATACTC+AGG + chr8_2:4820499-4820518 None:intergenic 45.0%
GAGTATGAACCTGAGGAGTA+TGG - chr8_2:4820499-4820518 Msa1229180:three_prime_UTR 45.0%
! TATGAACCTGAGGAGTATGG+TGG - chr8_2:4820502-4820521 Msa1229180:three_prime_UTR 45.0%
! ATGAACCTGAGGAGTATGGT+GGG - chr8_2:4820503-4820522 Msa1229180:three_prime_UTR 45.0%
TGGGGTTGACTATGATGAGA+AGG - chr8_2:4820522-4820541 Msa1229180:three_prime_UTR 45.0%
! GTTGGTGAAGAAGGTGATTC+AGG - chr8_2:4820607-4820626 Msa1229180:three_prime_UTR 45.0%
GGAACATCGTGAAGTTGTGA+AGG - chr8_2:4820741-4820760 Msa1229180:three_prime_UTR 45.0%
ATCGTGAAGTTGTGAAGGAG+AGG - chr8_2:4820746-4820765 Msa1229180:three_prime_UTR 45.0%
TTGTGAAGGAGAGGCGAAAA+CGG - chr8_2:4820755-4820774 Msa1229180:three_prime_UTR 45.0%
CTTCAGTAGCATCCTTGTCT+AGG + chr8_2:4820807-4820826 None:intergenic 45.0%
! AGGAAGGTTTTCGGTGAAGT+TGG - chr8_2:4820835-4820854 Msa1229180:three_prime_UTR 45.0%
! GGAAGGTTTTCGGTGAAGTT+GGG - chr8_2:4820836-4820855 Msa1229180:three_prime_UTR 45.0%
! GAAGGTTTTCGGTGAAGTTG+GGG - chr8_2:4820837-4820856 Msa1229180:three_prime_UTR 45.0%
AGCAGAGCTTAAAAACCCAG+TGG - chr8_2:4820960-4820979 Msa1229180:intron 45.0%
GGACAGTGATACCCTCTATT+TGG - chr8_2:4821105-4821124 Msa1229180:CDS 45.0%
! GAACTTCTGGTGCCAGTTAA+AGG - chr8_2:4821265-4821284 Msa1229180:intron 45.0%
CCTCTTCTGCAGTCTCTTAA+AGG + chr8_2:4821417-4821436 None:intergenic 45.0%
! CCTTTAAGAGACTGCAGAAG+AGG - chr8_2:4821414-4821433 Msa1229180:intron 45.0%
CAGAAGAGGGATGTTACGTT+TGG - chr8_2:4821428-4821447 Msa1229180:intron 45.0%
!! TGGAGTTGATAAGCCTGCAA+AGG - chr8_2:4821448-4821467 Msa1229180:CDS 45.0%
GTTCCAATACCATCAGTGGT+TGG - chr8_2:4821603-4821622 Msa1229180:intron 45.0%
TTGATGCACTTCCTCCTTCA+TGG - chr8_2:4821983-4822002 Msa1229180:CDS 45.0%
TGATGCACTTCCTCCTTCAT+GGG - chr8_2:4821984-4822003 Msa1229180:CDS 45.0%
! AGATGTGCTGACAGCATTAC+TGG - chr8_2:4822138-4822157 Msa1229180:CDS 45.0%
ACTGGTACAGAATTGGGTGA+AGG - chr8_2:4822156-4822175 Msa1229180:CDS 45.0%
TCTTCTTTCAGGCCAAAGTG+AGG - chr8_2:4822251-4822270 Msa1229180:intron 45.0%
CTTCTTTCAGGCCAAAGTGA+GGG - chr8_2:4822252-4822271 Msa1229180:intron 45.0%
TGATAACCTAGCCCTCACTT+TGG + chr8_2:4822266-4822285 None:intergenic 45.0%
AAGTGAGGGCTAGGTTATCA+AGG - chr8_2:4822266-4822285 Msa1229180:intron 45.0%
TTATCAAGGCCACTTCAGAG+AGG - chr8_2:4822280-4822299 Msa1229180:intron 45.0%
! CACGACCAACATGTTTTCCT+CGG + chr8_2:4822306-4822325 None:intergenic 45.0%
GAGGAAAACATGTTGGTCGT+GGG - chr8_2:4822305-4822324 Msa1229180:CDS 45.0%
AGGAAAACATGTTGGTCGTG+GGG - chr8_2:4822306-4822325 Msa1229180:CDS 45.0%
ATTATTGCAGATCCGCGACT+CGG + chr8_2:4822340-4822359 None:intergenic 45.0%
GCGGATCTGCAATAATGTCA+AGG - chr8_2:4822344-4822363 Msa1229180:CDS 45.0%
!! CTAGCACTGATAGACCTGAT+TGG + chr8_2:4822445-4822464 None:intergenic 45.0%
TCATAAGATCTAGCTGGAGG+AGG + chr8_2:4822514-4822533 None:intergenic 45.0%
TCTGCAGCAACTCTACTTCT+TGG + chr8_2:4822697-4822716 None:intergenic 45.0%
! ATAAGTTGGGCGTCTTTCAG+AGG + chr8_2:4822737-4822756 None:intergenic 45.0%
CTGAAAGACGCCCAACTTAT+AGG - chr8_2:4822737-4822756 Msa1229180:CDS 45.0%
TATAGGGATTATCCACCTCG+TGG - chr8_2:4822754-4822773 Msa1229180:CDS 45.0%
! TGGATGATGGTTACAGCCAA+AGG - chr8_2:4822836-4822855 Msa1229180:CDS 45.0%
! GTTACAGCCAAAGGTATGAG+AGG - chr8_2:4822845-4822864 Msa1229180:intron 45.0%
ACGATAACTTGGATGGGAAG+GGG + chr8_2:4822887-4822906 None:intergenic 45.0%
CACGATAACTTGGATGGGAA+GGG + chr8_2:4822888-4822907 None:intergenic 45.0%
TCACGATAACTTGGATGGGA+AGG + chr8_2:4822889-4822908 None:intergenic 45.0%
TCCCATCCAAGTTATCGTGA+AGG - chr8_2:4822889-4822908 Msa1229180:intron 45.0%
GTCCTTCACGATAACTTGGA+TGG + chr8_2:4822894-4822913 None:intergenic 45.0%
ACTCCAATCGAGCTCTTGAT+TGG + chr8_2:4823131-4823150 None:intergenic 45.0%
GCTCGATTGGAGTATGACTA+TGG - chr8_2:4823138-4823157 Msa1229180:intron 45.0%
CGATTGGAGTATGACTATGG+TGG - chr8_2:4823141-4823160 Msa1229180:intron 45.0%
TCACAGTACGGTGATGCTTA+TGG - chr8_2:4823171-4823190 Msa1229180:intron 45.0%
ACGGTGATGCTTATGGTGAT+AGG - chr8_2:4823178-4823197 Msa1229180:intron 45.0%
AGAGTCGGAAGATCTAGTCT+TGG - chr8_2:4823288-4823307 Msa1229180:intron 45.0%
TATGGCGGTAATGATGTTGG+AGG - chr8_2:4823486-4823505 Msa1229180:CDS 45.0%
! GAGATTGGTTGAGAAAGGAC+AGG + chr8_2:4823569-4823588 None:intergenic 45.0%
TCCTTTCTCAACCAATCTCG+AGG - chr8_2:4823570-4823589 Msa1229180:intron 45.0%
! TCCTCGAGATTGGTTGAGAA+AGG + chr8_2:4823574-4823593 None:intergenic 45.0%
AATGTATTCTGGTAGGGGCA+CGG - chr8_2:4823666-4823685 Msa1229180:intron 45.0%
ATGACGAAGGTTGCACATTG+TGG - chr8_2:4823869-4823888 Msa1229180:CDS 45.0%
!! ATGACGGCCTTTGAAGCTTA+TGG - chr8_2:4823947-4823966 Msa1229180:CDS 45.0%
ACAAGTAGCATCTCTAGCCT+TGG + chr8_2:4824264-4824283 None:intergenic 45.0%
! GGCTAGAGATGCTACTTGTT+TGG - chr8_2:4824265-4824284 Msa1229180:CDS 45.0%
! GTTTTTACAGTGCTGCAGTC+AGG - chr8_2:4824383-4824402 Msa1229180:CDS 45.0%
!! TTGGGATGTGTTGGTGTTGT+AGG - chr8_2:4824492-4824511 Msa1229180:intron 45.0%
ATTATCTTGCAGTCCACCTC+AGG + chr8_2:4824609-4824628 None:intergenic 45.0%
TGAATGTACTTCATGCACCC+TGG - chr8_2:4824826-4824845 Msa1229180:intron 45.0%
AAATCAAGCTAGGTAGGGTG+GGG + chr8_2:4824859-4824878 None:intergenic 45.0%
CTAAATCAAGCTAGGTAGGG+TGG + chr8_2:4824861-4824880 None:intergenic 45.0%
AGACAACCAACAATGTGGGT+CGG + chr8_2:4824991-4825010 None:intergenic 45.0%
! TATGGTTCGGGAGTTGGAAA+GGG + chr8_2:4825027-4825046 None:intergenic 45.0%
! ATATGGTTCGGGAGTTGGAA+AGG + chr8_2:4825028-4825047 None:intergenic 45.0%
GACAACCAACGATATGGTTC+GGG + chr8_2:4825039-4825058 None:intergenic 45.0%
! TGGGTTATTACGGACTGACT+TGG - chr8_2:4825307-4825326 Msa1229180:CDS 45.0%
GCAAAGCAAACAGAACAGTG+TGG + chr8_2:4825346-4825365 None:intergenic 45.0%
! TGTTTGCTTTGCTGTACTGC+AGG - chr8_2:4825354-4825373 Msa1229180:CDS 45.0%
! GTTTGCTTTGCTGTACTGCA+GGG - chr8_2:4825355-4825374 Msa1229180:CDS 45.0%
GCTCTCATCAAGCTCTTGTT+AGG - chr8_2:4825383-4825402 Msa1229180:CDS 45.0%
!!! TTATTGATTTTTTTTATATT+TGG - chr8_2:4819750-4819769 Msa1229180:three_prime_UTR 5.0%
!!! TATTGATTTTTTTTATATTT+GGG - chr8_2:4819751-4819770 Msa1229180:three_prime_UTR 5.0%
GAACCTCTCTTTGGCGTCTT+CGG + chr8_2:4819351-4819370 None:intergenic 50.0%
! AGCGGGTAGTGGTTCAAAGA+GGG - chr8_2:4819371-4819390 Msa1229180:three_prime_UTR 50.0%
TTGGTTGTGGCAGATTTCGG+TGG - chr8_2:4820192-4820211 Msa1229180:three_prime_UTR 50.0%
CCGCCAAAAAAACACCATGG+CGG + chr8_2:4820233-4820252 None:intergenic 50.0%
!!! CCGCCATGGTGTTTTTTTGG+CGG - chr8_2:4820230-4820249 Msa1229180:three_prime_UTR 50.0%
GAGAGACGAGCGTCTAGATT+TGG - chr8_2:4820462-4820481 Msa1229180:three_prime_UTR 50.0%
AGACGAGCGTCTAGATTTGG+AGG - chr8_2:4820465-4820484 Msa1229180:three_prime_UTR 50.0%
! TGAACCTGAGGAGTATGGTG+GGG - chr8_2:4820504-4820523 Msa1229180:three_prime_UTR 50.0%
TGAACAGGAAGAGGGACATG+AGG - chr8_2:4820549-4820568 Msa1229180:three_prime_UTR 50.0%
TGAGGTGGGAGATGAAGTTG+AGG - chr8_2:4820567-4820586 Msa1229180:three_prime_UTR 50.0%
TGAAGAAGGTGATTCAGGCG+AGG - chr8_2:4820612-4820631 Msa1229180:three_prime_UTR 50.0%
GATGGCTGATGTGGATGAAG+AGG - chr8_2:4820720-4820739 Msa1229180:three_prime_UTR 50.0%
! ATTTGTTGGGGGCCTAGACA+AGG - chr8_2:4820792-4820811 Msa1229180:three_prime_UTR 50.0%
TGAAGTTGGGGTTGTGACTG+AGG - chr8_2:4820849-4820868 Msa1229180:three_prime_UTR 50.0%
!! ATGTGGTGTTACTCCGAGTC+AGG - chr8_2:4821084-4821103 Msa1229180:intron 50.0%
! AGGGTATCACTGTCCTGACT+CGG + chr8_2:4821100-4821119 None:intergenic 50.0%
AGGCATCCATTGCATCTGAG+CGG + chr8_2:4821397-4821416 None:intergenic 50.0%
! TCCTTCTAGTGGTTGGTTCC+AGG - chr8_2:4821894-4821913 Msa1229180:CDS 50.0%
ACCTGGAACCAACCACTAGA+AGG + chr8_2:4821898-4821917 None:intergenic 50.0%
TAGTCCTTTCTACGAGCAGC+TGG + chr8_2:4822081-4822100 None:intergenic 50.0%
GCTGCTCGTAGAAAGGACTA+TGG - chr8_2:4822081-4822100 Msa1229180:CDS 50.0%
AGAGGCCGAGGAAAACATGT+TGG - chr8_2:4822298-4822317 Msa1229180:CDS 50.0%
CGAGGAAAACATGTTGGTCG+TGG - chr8_2:4822304-4822323 Msa1229180:CDS 50.0%
TTATTGCAGATCCGCGACTC+GGG + chr8_2:4822339-4822358 None:intergenic 50.0%
! GCACTGATAGACCTGATTGG+CGG + chr8_2:4822442-4822461 None:intergenic 50.0%
! GGTAGTGGCCTACTTCTAAC+TGG + chr8_2:4822493-4822512 None:intergenic 50.0%
GCAACTCTACTTCTTGGAGG+TGG + chr8_2:4822691-4822710 None:intergenic 50.0%
GCAGCAACTCTACTTCTTGG+AGG + chr8_2:4822694-4822713 None:intergenic 50.0%
TCAGAGTAGTCAGATCCACG+AGG + chr8_2:4822772-4822791 None:intergenic 50.0%
CAGCACGAGCAGTACTTCTA+GGG + chr8_2:4822798-4822817 None:intergenic 50.0%
TCATCCACGTAACCTCTCCT+AGG + chr8_2:4822823-4822842 None:intergenic 50.0%
AGGAGAGGTTACGTGGATGA+TGG - chr8_2:4822823-4822842 Msa1229180:CDS 50.0%
CGATAACTTGGATGGGAAGG+GGG + chr8_2:4822886-4822905 None:intergenic 50.0%
ATCTTGGGGGAACATCATCC+TGG + chr8_2:4823089-4823108 None:intergenic 50.0%
!! ACCAGTATCGGCGTATCTTG+GGG + chr8_2:4823103-4823122 None:intergenic 50.0%
!! CACCAGTATCGGCGTATCTT+GGG + chr8_2:4823104-4823123 None:intergenic 50.0%
TGATTGGCGAGCACCAGTAT+CGG + chr8_2:4823115-4823134 None:intergenic 50.0%
TCGCCAATCAAGAGCTCGAT+TGG - chr8_2:4823125-4823144 Msa1229180:intron 50.0%
GGCAGCCGAAGTTCTATTTC+TGG - chr8_2:4823321-4823340 Msa1229180:CDS 50.0%
CACATGGGGTGTATAGCAGT+CGG - chr8_2:4823352-4823371 Msa1229180:CDS 50.0%
TTCCGATCAGGCTCTTATGG+CGG - chr8_2:4823471-4823490 Msa1229180:CDS 50.0%
TACCGCCATAAGAGCCTGAT+CGG + chr8_2:4823476-4823495 None:intergenic 50.0%
CTCAACCAATCTCGAGGAGT+CGG - chr8_2:4823576-4823595 Msa1229180:intron 50.0%
! GTTCCTGTGATGTAGGTTGG+TGG - chr8_2:4823628-4823647 Msa1229180:intron 50.0%
! ATGTATTCTGGTAGGGGCAC+GGG - chr8_2:4823667-4823686 Msa1229180:intron 50.0%
! CTTTTCGCAAGGGATGACGA+AGG - chr8_2:4823856-4823875 Msa1229180:CDS 50.0%
AGCTATCTCGGGTCTTCTCT+AGG - chr8_2:4824065-4824084 Msa1229180:CDS 50.0%
TATCTCGGGTCTTCTCTAGG+TGG - chr8_2:4824068-4824087 Msa1229180:CDS 50.0%
ATCTCGGGTCTTCTCTAGGT+GGG - chr8_2:4824069-4824088 Msa1229180:CDS 50.0%
GGACTCAAGTTAGTGAGCGA+TGG - chr8_2:4824124-4824143 Msa1229180:CDS 50.0%
GCGAAATCGGGAAACTATGC+AGG + chr8_2:4824667-4824686 None:intergenic 50.0%
AATCAAGCTAGGTAGGGTGG+GGG + chr8_2:4824858-4824877 None:intergenic 50.0%
GACAACCAACAATGTGGGTC+GGG + chr8_2:4824990-4825009 None:intergenic 50.0%
! CAACGATATGGTTCGGGAGT+TGG + chr8_2:4825033-4825052 None:intergenic 50.0%
CAACTCCCGAACCATATCGT+TGG - chr8_2:4825031-4825050 Msa1229180:intron 50.0%
! TCACTGGGCGTGGGTTATTA+CGG - chr8_2:4825297-4825316 Msa1229180:CDS 50.0%
GACGCCAAAGAGAGGTTCAG+CGG - chr8_2:4819353-4819372 Msa1229180:three_prime_UTR 55.0%
ACGCCAAAGAGAGGTTCAGC+GGG - chr8_2:4819354-4819373 Msa1229180:three_prime_UTR 55.0%
CTACCCGCTGAACCTCTCTT+TGG + chr8_2:4819360-4819379 None:intergenic 55.0%
AAGAGAGGTTCAGCGGGTAG+TGG - chr8_2:4819360-4819379 Msa1229180:three_prime_UTR 55.0%
! CAGCGGGTAGTGGTTCAAAG+AGG - chr8_2:4819370-4819389 Msa1229180:three_prime_UTR 55.0%
! GCGGGTAGTGGTTCAAAGAG+GGG - chr8_2:4819372-4819391 Msa1229180:three_prime_UTR 55.0%
! GGTAGTGGTTCAAAGAGGGG+TGG - chr8_2:4819375-4819394 Msa1229180:three_prime_UTR 55.0%
AGGGGTGGCAGATTATCGAG+AGG - chr8_2:4819390-4819409 Msa1229180:three_prime_UTR 55.0%
TCAACCCCACCATACTCCTC+AGG + chr8_2:4820511-4820530 None:intergenic 55.0%
ACAGGAAGAGGGACATGAGG+TGG - chr8_2:4820552-4820571 Msa1229180:three_prime_UTR 55.0%
CAGGAAGAGGGACATGAGGT+GGG - chr8_2:4820553-4820572 Msa1229180:three_prime_UTR 55.0%
GGCGAGGAAGAAGTCGAAGA+TGG - chr8_2:4820628-4820647 Msa1229180:three_prime_UTR 55.0%
GGATGACGAGCATGCTGATG+AGG - chr8_2:4820675-4820694 Msa1229180:three_prime_UTR 55.0%
TTGGGGTTGTGACTGAGGTC+AGG - chr8_2:4820854-4820873 Msa1229180:three_prime_UTR 55.0%
TTCCTCCCGCTCAGATGCAA+TGG - chr8_2:4821388-4821407 Msa1229180:intron 55.0%
ATCCATTGCATCTGAGCGGG+AGG + chr8_2:4821393-4821412 None:intergenic 55.0%
GGCATCCATTGCATCTGAGC+GGG + chr8_2:4821396-4821415 None:intergenic 55.0%
GGGTGTTCAGCATGACACAC+CGG - chr8_2:4821849-4821868 Msa1229180:intron 55.0%
CATGCCAGCTGCTCGTAGAA+AGG - chr8_2:4822074-4822093 Msa1229180:CDS 55.0%
AGCAGCATCGTGTGAGCCAA+AGG + chr8_2:4822115-4822134 None:intergenic 55.0%
TTCAGGCCAAAGTGAGGGCT+AGG - chr8_2:4822257-4822276 Msa1229180:intron 55.0%
! TTTCCTCGGCCTCTCTGAAG+TGG + chr8_2:4822292-4822311 None:intergenic 55.0%
AGAAACTACGGGGTGCAGGT+CGG + chr8_2:4822384-4822403 None:intergenic 55.0%
TCGCGTGGGGTAAGAGGAAT+TGG - chr8_2:4822406-4822425 Msa1229180:CDS 55.0%
GATCTAGCTGGAGGAGGTAG+TGG + chr8_2:4822508-4822527 None:intergenic 55.0%
GAGTAGTCAGATCCACGAGG+TGG + chr8_2:4822769-4822788 None:intergenic 55.0%
GCAGCACGAGCAGTACTTCT+AGG + chr8_2:4822799-4822818 None:intergenic 55.0%
TGCACCTAGGAGAGGTTACG+TGG - chr8_2:4822816-4822835 Msa1229180:CDS 55.0%
GAGGTGGCCTCTCATACCTT+TGG + chr8_2:4822855-4822874 None:intergenic 55.0%
TAACTTGGATGGGAAGGGGG+TGG + chr8_2:4822883-4822902 None:intergenic 55.0%
GGGCGTCCTTCACGATAACT+TGG + chr8_2:4822898-4822917 None:intergenic 55.0%
AAAACGTTCGTACGCTGCCG+TGG - chr8_2:4822945-4822964 Msa1229180:intron 55.0%
GGGGGAACATCATCCTGGTT+GGG + chr8_2:4823084-4823103 None:intergenic 55.0%
TGGGGGAACATCATCCTGGT+TGG + chr8_2:4823085-4823104 None:intergenic 55.0%
!! CCAGTATCGGCGTATCTTGG+GGG + chr8_2:4823102-4823121 None:intergenic 55.0%
!! GCACCAGTATCGGCGTATCT+TGG + chr8_2:4823105-4823124 None:intergenic 55.0%
GGTGGCAGTGCTTCACAGTA+CGG - chr8_2:4823159-4823178 Msa1229180:intron 55.0%
AGTCGGCAGGGCATGAGTTA+TGG - chr8_2:4823369-4823388 Msa1229180:CDS 55.0%
CAGGGCATGAGTTATGGTGG+AGG - chr8_2:4823375-4823394 Msa1229180:CDS 55.0%
GGCGGTGATTACGTTTCTCG+TGG - chr8_2:4823528-4823547 Msa1229180:CDS 55.0%
ACAGTCCGACTCCTCGAGAT+TGG + chr8_2:4823584-4823603 None:intergenic 55.0%
CTGCCACCAACCTACATCAC+AGG + chr8_2:4823634-4823653 None:intergenic 55.0%
! GGTGGCGGTAGCAGTTACAT+GGG - chr8_2:4823688-4823707 Msa1229180:CDS 55.0%
GGTAGCAGTTACATGGGCAG+CGG - chr8_2:4823694-4823713 Msa1229180:CDS 55.0%
TTACATGGGCAGCGGTGGTT+CGG - chr8_2:4823702-4823721 Msa1229180:CDS 55.0%
TAGGGTGGGGGGTAAAACCA+GGG + chr8_2:4824846-4824865 None:intergenic 55.0%
ATCAAGCTAGGTAGGGTGGG+GGG + chr8_2:4824857-4824876 None:intergenic 55.0%
CAACAATGTGGGTCGGGAGT+TGG + chr8_2:4824984-4825003 None:intergenic 55.0%
CAACTCCCGACCCACATTGT+TGG - chr8_2:4824982-4825001 Msa1229180:intron 55.0%
CCTCTCTTTGGCGTCTTCGG+AGG + chr8_2:4819348-4819367 None:intergenic 60.0%
CCTCCGAAGACGCCAAAGAG+AGG - chr8_2:4819345-4819364 Msa1229180:three_prime_UTR 60.0%
GACGAGAAACTACGGGGTGC+AGG + chr8_2:4822388-4822407 None:intergenic 60.0%
CCACGCGACGAGAAACTACG+GGG + chr8_2:4822394-4822413 None:intergenic 60.0%
CCCACGCGACGAGAAACTAC+GGG + chr8_2:4822395-4822414 None:intergenic 60.0%
CCCGTAGTTTCTCGTCGCGT+GGG - chr8_2:4822392-4822411 Msa1229180:CDS 60.0%
CCCCACGCGACGAGAAACTA+CGG + chr8_2:4822396-4822415 None:intergenic 60.0%
CCGTAGTTTCTCGTCGCGTG+GGG - chr8_2:4822393-4822412 Msa1229180:CDS 60.0%
TTCTCGTCGCGTGGGGTAAG+AGG - chr8_2:4822400-4822419 Msa1229180:CDS 60.0%
GAAGTCGTGCTCCGCCAATC+AGG - chr8_2:4822428-4822447 Msa1229180:CDS 60.0%
GTACTGCTCGTGCTGCACCT+AGG - chr8_2:4822803-4822822 Msa1229180:CDS 60.0%
CCCCCAAGATACGCCGATAC+TGG - chr8_2:4823099-4823118 Msa1229180:intron 60.0%
TGGGGTGTATAGCAGTCGGC+AGG - chr8_2:4823356-4823375 Msa1229180:CDS 60.0%
GGGGTGTATAGCAGTCGGCA+GGG - chr8_2:4823357-4823376 Msa1229180:CDS 60.0%
CGGCAGGGCATGAGTTATGG+TGG - chr8_2:4823372-4823391 Msa1229180:CDS 60.0%
! TATTCTGGTAGGGGCACGGG+TGG - chr8_2:4823670-4823689 Msa1229180:intron 60.0%
! GGGTGGCGGTAGCAGTTACA+TGG - chr8_2:4823687-4823706 Msa1229180:CDS 60.0%
AGCAGTTACATGGGCAGCGG+TGG - chr8_2:4823697-4823716 Msa1229180:CDS 60.0%
TACATGGGCAGCGGTGGTTC+GGG - chr8_2:4823703-4823722 Msa1229180:CDS 60.0%
GTAGGGTGGGGGGTAAAACC+AGG + chr8_2:4824847-4824866 None:intergenic 60.0%
GGAGCATGACCGTGAGCGTG+CGG - chr8_2:4820696-4820715 Msa1229180:three_prime_UTR 65.0%
TGACCGTGAGCGTGCGGAGA+TGG - chr8_2:4820702-4820721 Msa1229180:three_prime_UTR 65.0%
CAGCCATCTCCGCACGCTCA+CGG + chr8_2:4820708-4820727 None:intergenic 65.0%
GCGTGCGGAGATGGCTGATG+TGG - chr8_2:4820711-4820730 Msa1229180:three_prime_UTR 65.0%
AGGCCACTTCAGAGAGGCCG+AGG - chr8_2:4822286-4822305 Msa1229180:CDS 65.0%
GCAGGTCGGCTGCTCCAAGA+AGG + chr8_2:4822370-4822389 None:intergenic 65.0%
CCCCGTAGTTTCTCGTCGCG+TGG - chr8_2:4822391-4822410 Msa1229180:CDS 65.0%
GCTCGTGCTGCACCTAGGAG+AGG - chr8_2:4822808-4822827 Msa1229180:CDS 65.0%
CTTGGATGGGAAGGGGGTGG+AGG + chr8_2:4822880-4822899 None:intergenic 65.0%
GGGGACTATCGCCCGAGTCG+CGG - chr8_2:4822325-4822344 Msa1229180:CDS 70.0%
GAAGGGGGTGGAGGAGGAGG+TGG + chr8_2:4822871-4822890 None:intergenic 70.0%
TGGGAAGGGGGTGGAGGAGG+AGG + chr8_2:4822874-4822893 None:intergenic 70.0%
GGATGGGAAGGGGGTGGAGG+AGG + chr8_2:4822877-4822896 None:intergenic 70.0%
! TCTGGTAGGGGCACGGGTGG+CGG - chr8_2:4823673-4823692 Msa1229180:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 4819204 4825626 4819204 ID=Msa1229180;Name=Msa1229180
chr8_2 mRNA 4819204 4825626 4819204 ID=Msa1229180-mRNA-1;Parent=Msa1229180;Name=Msa1229180-mRNA-1;_AED=0.07;_eAED=0.07;_QI=138|1|1|1|0.90|0.83|12|1710|800
chr8_2 exon 4819204 4820912 4819204 ID=Msa1229180-mRNA-1:exon:1630;Parent=Msa1229180-mRNA-1
chr8_2 exon 4821091 4821187 4821091 ID=Msa1229180-mRNA-1:exon:1629;Parent=Msa1229180-mRNA-1
chr8_2 exon 4821273 4821349 4821273 ID=Msa1229180-mRNA-1:exon:1628;Parent=Msa1229180-mRNA-1
chr8_2 exon 4821434 4821540 4821434 ID=Msa1229180-mRNA-1:exon:1627;Parent=Msa1229180-mRNA-1
chr8_2 exon 4821631 4821740 4821631 ID=Msa1229180-mRNA-1:exon:1626;Parent=Msa1229180-mRNA-1
chr8_2 exon 4821864 4822198 4821864 ID=Msa1229180-mRNA-1:exon:1625;Parent=Msa1229180-mRNA-1
chr8_2 exon 4822283 4822568 4822283 ID=Msa1229180-mRNA-1:exon:1624;Parent=Msa1229180-mRNA-1
chr8_2 exon 4822642 4822863 4822642 ID=Msa1229180-mRNA-1:exon:1623;Parent=Msa1229180-mRNA-1
chr8_2 exon 4823310 4823549 4823310 ID=Msa1229180-mRNA-1:exon:1622;Parent=Msa1229180-mRNA-1
chr8_2 exon 4823671 4823760 4823671 ID=Msa1229180-mRNA-1:exon:1621;Parent=Msa1229180-mRNA-1
chr8_2 exon 4823849 4824408 4823849 ID=Msa1229180-mRNA-1:exon:1620;Parent=Msa1229180-mRNA-1
chr8_2 exon 4825209 4825626 4825209 ID=Msa1229180-mRNA-1:exon:1619;Parent=Msa1229180-mRNA-1
chr8_2 five_prime_UTR 4825489 4825626 4825489 ID=Msa1229180-mRNA-1:five_prime_utr;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4825209 4825488 4825209 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4823849 4824408 4823849 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4823671 4823760 4823671 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4823310 4823549 4823310 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4822642 4822863 4822642 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4822283 4822568 4822283 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4821864 4822198 4821864 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4821631 4821740 4821631 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4821434 4821540 4821434 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4821273 4821349 4821273 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 CDS 4821092 4821187 4821092 ID=Msa1229180-mRNA-1:cds;Parent=Msa1229180-mRNA-1
chr8_2 three_prime_UTR 4821091 4821091 4821091 ID=Msa1229180-mRNA-1:three_prime_utr;Parent=Msa1229180-mRNA-1
chr8_2 three_prime_UTR 4819204 4820912 4819204 ID=Msa1229180-mRNA-1:three_prime_utr;Parent=Msa1229180-mRNA-1
Gene Sequence

>Msa1229180

ATGCCTCCGAAGACGCCAAAGAGAGGTTCAGCGGGTAGTGGTTCAAAGAGGGGTGGCAGATTATCGAGAGGAACTGCGAAATCTGCACAGAATCAACAACAACAGCAATCTGAACCTGTTGAAGAGAAGACGGTGATTGAAGAAGAGATCAAGGTAGAAGAGAATCTCGTTGTTGAGGAAAAACCTGTGGTGGAAGAAGATAATCCTGTTGTTGAAGATAAAGCTATTGATATGAATCAAATTGCTCCTGAGGCTGTAGAAGATGCTAATCTAGCCAAAAAAGATGAAGAGGAGGTTAAGGAGTCTATAGATGAATATGAGAGAGACGAGCGTCTAGATTTGGAGGATAATGATCCTGAGTATGAACCTGAGGAGTATGGTGGGGTTGACTATGATGAGAAGGAAATTGAACAGGAAGAGGGACATGAGGTGGGAGATGAAGTTGAGGAAGAACCTGAAGAAAATGTTGGTGAAGAAGGTGATTCAGGCGAGGAAGAAGTCGAAGATGGTCATGATGAAATTGAGGGAGAAGAGGATGACGAGCATGCTGATGAGGAGCATGACCGTGAGCGTGCGGAGATGGCTGATGTGGATGAAGAGGAACATCGTGAAGTTGTGAAGGAGAGGCGAAAACGGAAAGAATTTGAAGTATTTGTTGGGGGCCTAGACAAGGATGCTACTGAAGATGATCTGAGGAAGGTTTTCGGTGAAGTTGGGGTTGTGACTGAGGTCAGGCTGATGATGAATCCTCAGACAAAAAAGAACAAGGGATTTGCATTCTTGCGGTTTGAAAATGTGGAACAAGCAAAACGAGCTGTAGCAGAGCTTAAAAACCCAGTGATTAATGGAAAACAATGTGGTGTTACTCCGAGTCAGGACAGTGATACCCTCTATTTGGGAAACATATGCAAAACATGGACAAAGGAAGCTTTAAAGGAGAAGTTGAAGCATTATGGAGTTACAAATGTTGAGGATATAACTTTGGTAGAAGATTCTAATGATAAAGGAACAAACCGTGGATTTGCATTCTTGGAATTTTCCTCCCGCTCAGATGCAATGGATGCCTTTAAGAGACTGCAGAAGAGGGATGTTACGTTTGGAGTTGATAAGCCTGCAAAGGTTTCATTTGCAGATTCTTTTATTGACCCGGGTGATGAAATTATGTCACAGGTTAAAACTGTATTTATTGATGCACTTCCTCCTTCATGGGATGAAGATTATGTGCGGAATCTTCTGAAGAAATATGGCGAGGTTGAAAAGATTGAGCTTGCAAGGAACATGCCAGCTGCTCGTAGAAAGGACTATGGATTTGTTACCTTTGGCTCACACGATGCTGCTATAAGATGTGCTGACAGCATTACTGGTACAGAATTGGGTGAAGGTGACAAAAAGGCCAAAGTGAGGGCTAGGTTATCAAGGCCACTTCAGAGAGGCCGAGGAAAACATGTTGGTCGTGGGGACTATCGCCCGAGTCGCGGATCTGCAATAATGTCAAGGCCTTCTTGGAGCAGCCGACCTGCACCCCGTAGTTTCTCGTCGCGTGGGGTAAGAGGAATTGGAAGTCGTGCTCCGCCAATCAGGTCTATCAGTGCTAGAGATAGACGCCCTGTCATGTCTATACCAGTTAGAAGTAGGCCACTACCTCCTCCAGCTAGATCTTATGATAGAAGACCAGCTGATGCTGCATATTCAAAAAGCAGTGTGAAGAGAGATTATGGTCGGCGTGATGATCTACCACCTCCAAGAAGTAGAGTTGCTGCAGATTATGGATCAAGGATGACCTCTGAAAGACGCCCAACTTATAGGGATTATCCACCTCGTGGATCTGACTACTCTGATCTCCCTAGAAGTACTGCTCGTGCTGCACCTAGGAGAGGTTACGTGGATGATGGTTACAGCCAAAGGTATGAGAGGCCACCTCCTCCTCCACCCCCTTCCCATCCAAGTTATCGTGAAGGACGCCCTCGTGATTATGATTCTCTATCTGGCTCAAAACGTTCGTACGCTGCCGTGGATGATGTTCCCCCAAGATACGCCGATACTGGTGCTCGCCAATCAAGAGCTCGATTGGAGTATGACTATGGTGGCAGTGCTTCACAGTACGGTGATGCTTATGGTGATAGAGTCGGAAGATCTAGTCTTGGATATGGTAGTGGCAGCCGAAGTTCTATTTCTGGTCAAGATTCACATGGGGTGTATAGCAGTCGGCAGGGCATGAGTTATGGTGGAGGCTCTTATGGCGGTAATGATGTTGGAGGCATGTACTCATCAAGTTATGGCGGTGATTACGTTTCTCGTGGAAATGATGTTGGTGGCAGCTCATATTCATCAATGTATTCTGGTAGGGGCACGGGTGGCGGTAGCAGTTACATGGGCAGCGGTGGTTCGGGATCTTATTATTGA
Protein sequence

>Msa1229180

MPPKTPKRGSAGSGSKRGGRLSRGTAKSAQNQQQQQSEPVEEKTVIEEEIKVEENLVVEEKPVVEEDNPVVEDKAIDMNQIAPEAVEDANLAKKDEEEVKESIDEYERDERLDLEDNDPEYEPEEYGGVDYDEKEIEQEEGHEVGDEVEEEPEENVGEEGDSGEEEVEDGHDEIEGEEDDEHADEEHDRERAEMADVDEEEHREVVKERRKRKEFEVFVGGLDKDATEDDLRKVFGEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAELKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDKGTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVFIDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITGTELGEGDKKAKVRARLSRPLQRGRGKHVGRGDYRPSRGSAIMSRPSWSSRPAPRSFSSRGVRGIGSRAPPIRSISARDRRPVMSIPVRSRPLPPPARSYDRRPADAAYSKSSVKRDYGRRDDLPPPRSRVAADYGSRMTSERRPTYRDYPPRGSDYSDLPRSTARAAPRRGYVDDGYSQRYERPPPPPPPSHPSYREGRPRDYDSLSGSKRSYAAVDDVPPRYADTGARQSRARLEYDYGGSASQYGDAYGDRVGRSSLGYGSGSRSSISGQDSHGVYSSRQGMSYGGGSYGGNDVGGMYSSSYGGDYVSRGNDVGGSSYSSMYSGRGTGGGSSYMGSGGSGSYY*