Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233590 | XP_003627181.2 | 94.591 | 869 | 47 | 0 | 1 | 869 | 1 | 869 | 0.0 | 1713 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233590 | sp|P38414|LOX1_LENCU | 77.816 | 861 | 187 | 4 | 11 | 869 | 8 | 866 | 0.0 | 1414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233590 | G7LIX6 | 94.591 | 869 | 47 | 0 | 1 | 869 | 1 | 869 | 0.0 | 1713 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0206370 | Msa1233590 | 0.820312 | 7.332411e-53 | -8.615850e-47 |
| Msa1233590 | Msa1261160 | 0.815656 | 8.268017e-52 | -8.615850e-47 |
| Msa1233590 | Msa1265570 | 0.801862 | 7.368688e-49 | -8.615850e-47 |
| Msa1233590 | Msa1288070 | 0.819284 | 1.258862e-52 | -8.615850e-47 |
| Msa1233590 | Msa1334670 | 0.806430 | 8.256111e-50 | -8.615850e-47 |
| Msa1233590 | Msa1365230 | 0.800399 | 1.467841e-48 | -8.615850e-47 |
| Msa0336460 | Msa1233590 | 0.802275 | 6.060929e-49 | -8.615850e-47 |
| Msa0336520 | Msa1233590 | 0.808836 | 2.546454e-50 | -8.615850e-47 |
| Msa1179290 | Msa1233590 | 0.813657 | 2.290506e-51 | -8.615850e-47 |
| Msa1192360 | Msa1233590 | 0.817786 | 2.752886e-52 | -8.615850e-47 |
| Msa1217890 | Msa1233590 | 0.818684 | 1.723563e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233590 | MtrunA17_Chr8g0342921 | 94.591 | 869 | 47 | 0 | 1 | 869 | 1 | 869 | 0.0 | 1713 |
| Msa1233590 | MtrunA17_Chr8g0342891 | 83.721 | 860 | 133 | 3 | 11 | 869 | 8 | 861 | 0.0 | 1509 |
| Msa1233590 | MtrunA17_Chr8g0342971 | 79.014 | 872 | 178 | 5 | 1 | 869 | 1 | 870 | 0.0 | 1435 |
| Msa1233590 | MtrunA17_Chr8g0342951 | 78.391 | 870 | 185 | 3 | 1 | 869 | 1 | 868 | 0.0 | 1418 |
| Msa1233590 | MtrunA17_Chr8g0344211 | 75.977 | 870 | 206 | 3 | 1 | 869 | 1 | 868 | 0.0 | 1404 |
| Msa1233590 | MtrunA17_Chr8g0342931 | 88.415 | 751 | 85 | 2 | 120 | 869 | 1 | 750 | 0.0 | 1394 |
| Msa1233590 | MtrunA17_Chr8g0343011 | 76.005 | 871 | 201 | 4 | 1 | 869 | 1 | 865 | 0.0 | 1390 |
| Msa1233590 | MtrunA17_Chr8g0342901 | 74.594 | 862 | 175 | 8 | 11 | 869 | 8 | 828 | 0.0 | 1309 |
| Msa1233590 | MtrunA17_Chr2g0329911 | 67.968 | 871 | 267 | 6 | 1 | 869 | 1 | 861 | 0.0 | 1234 |
| Msa1233590 | MtrunA17_Chr8g0342881 | 68.145 | 857 | 263 | 4 | 14 | 869 | 9 | 856 | 0.0 | 1225 |
| Msa1233590 | MtrunA17_Chr2g0329901 | 64.868 | 871 | 296 | 6 | 1 | 869 | 1 | 863 | 0.0 | 1185 |
| Msa1233590 | MtrunA17_Chr5g0406871 | 64.965 | 862 | 292 | 8 | 13 | 869 | 11 | 867 | 0.0 | 1161 |
| Msa1233590 | MtrunA17_Chr8g0343021 | 63.279 | 866 | 309 | 7 | 8 | 869 | 4 | 864 | 0.0 | 1144 |
| Msa1233590 | MtrunA17_Chr8g0343031 | 63.109 | 862 | 311 | 6 | 11 | 869 | 8 | 865 | 0.0 | 1140 |
| Msa1233590 | MtrunA17_Chr3g0120071 | 61.387 | 865 | 321 | 8 | 8 | 869 | 4 | 858 | 0.0 | 1112 |
| Msa1233590 | MtrunA17_Chr8g0343001 | 62.354 | 858 | 262 | 9 | 14 | 869 | 9 | 807 | 0.0 | 1075 |
| Msa1233590 | MtrunA17_Chr8g0342991 | 62.121 | 858 | 264 | 9 | 14 | 869 | 9 | 807 | 0.0 | 1073 |
| Msa1233590 | MtrunA17_Chr8g0342981 | 61.957 | 828 | 267 | 13 | 59 | 869 | 27 | 823 | 0.0 | 1013 |
| Msa1233590 | MtrunA17_Chr1g0191921 | 57.028 | 868 | 336 | 9 | 13 | 869 | 17 | 858 | 0.0 | 995 |
| Msa1233590 | MtrunA17_Chr7g0272791 | 55.606 | 874 | 349 | 11 | 10 | 869 | 19 | 867 | 0.0 | 986 |
| Msa1233590 | MtrunA17_Chr1g0205611 | 54.525 | 873 | 354 | 11 | 15 | 869 | 9 | 856 | 0.0 | 959 |
| Msa1233590 | MtrunA17_Chr8g0344201 | 44.734 | 845 | 445 | 13 | 35 | 868 | 93 | 926 | 0.0 | 716 |
| Msa1233590 | MtrunA17_Chr8g0344241 | 79.747 | 395 | 80 | 0 | 475 | 869 | 67 | 461 | 0.0 | 677 |
| Msa1233590 | MtrunA17_Chr8g0344241 | 69.492 | 59 | 18 | 0 | 296 | 354 | 10 | 68 | 1.44e-20 | 95.9 |
| Msa1233590 | MtrunA17_Chr3g0118651 | 42.543 | 865 | 448 | 16 | 31 | 869 | 62 | 903 | 0.0 | 660 |
| Msa1233590 | MtrunA17_Chr3g0118641 | 44.761 | 773 | 404 | 14 | 110 | 869 | 140 | 902 | 0.0 | 639 |
| Msa1233590 | MtrunA17_Chr8g0377101 | 42.303 | 825 | 439 | 16 | 65 | 869 | 109 | 916 | 0.0 | 633 |
| Msa1233590 | MtrunA17_Chr8g0338451 | 41.148 | 819 | 445 | 17 | 57 | 852 | 46 | 850 | 0.0 | 624 |
| Msa1233590 | MtrunA17_Chr4g0047281 | 40.000 | 870 | 480 | 14 | 8 | 866 | 54 | 892 | 0.0 | 617 |
| Msa1233590 | MtrunA17_Chr4g0033171 | 46.014 | 715 | 358 | 12 | 170 | 869 | 24 | 725 | 0.0 | 615 |
| Msa1233590 | MtrunA17_Chr3g0118621 | 44.358 | 771 | 403 | 14 | 114 | 869 | 106 | 865 | 0.0 | 595 |
| Msa1233590 | MtrunA17_Chr6g0471951 | 39.841 | 502 | 259 | 7 | 333 | 830 | 18 | 480 | 1.27e-126 | 390 |
| Msa1233590 | MtrunA17_Chr7g0218231 | 58.871 | 124 | 50 | 1 | 516 | 638 | 9 | 132 | 5.66e-42 | 149 |
| Msa1233590 | MtrunA17_Chr6g0468081 | 58.427 | 89 | 36 | 1 | 551 | 638 | 1 | 89 | 1.04e-26 | 104 |
| Msa1233590 | MtrunA17_Chr4g0047271 | 40.659 | 91 | 54 | 0 | 778 | 868 | 1 | 91 | 3.80e-17 | 77.4 |
| Msa1233590 | MtrunA17_Chr3g0137991 | 38.583 | 127 | 58 | 4 | 745 | 869 | 1 | 109 | 2.99e-15 | 72.4 |
| Msa1233590 | MtrunA17_Chr2g0277191 | 50.000 | 56 | 28 | 0 | 742 | 797 | 58 | 113 | 2.16e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233590 | AT1G55020.1 | 53.993 | 889 | 359 | 13 | 1 | 869 | 1 | 859 | 0.0 | 971 |
| Msa1233590 | AT3G22400.1 | 53.645 | 878 | 360 | 12 | 14 | 869 | 34 | 886 | 0.0 | 949 |
| Msa1233590 | AT1G17420.1 | 43.932 | 824 | 438 | 11 | 58 | 869 | 108 | 919 | 0.0 | 691 |
| Msa1233590 | AT1G72520.1 | 43.118 | 821 | 450 | 10 | 58 | 869 | 114 | 926 | 0.0 | 689 |
| Msa1233590 | AT3G45140.1 | 43.135 | 823 | 420 | 20 | 66 | 869 | 103 | 896 | 0.0 | 633 |
| Msa1233590 | AT3G45140.2 | 44.545 | 770 | 389 | 18 | 119 | 869 | 4 | 754 | 0.0 | 623 |
| Msa1233590 | AT1G67560.1 | 42.112 | 824 | 443 | 16 | 64 | 869 | 110 | 917 | 0.0 | 616 |
Find 218 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTACTTCCATACCAATTT+TGG | 0.089508 | 8_2:-10377468 | Msa1233590:CDS |
| CATCATGCAGCTGTTAATTT+TGG | 0.161979 | 8_2:-10374634 | Msa1233590:CDS |
| CCACTGTGCCCTTCACCTTT+TGG | 0.205162 | 8_2:+10379248 | None:intergenic |
| CTTTAGGAGGTGGAAACTTT+AGG | 0.219107 | 8_2:+10376361 | None:intergenic |
| GTATGTAAAGCTTGTTGTTT+TGG | 0.234578 | 8_2:+10375810 | None:intergenic |
| AAACCATGAAACTCATTAAA+TGG | 0.239469 | 8_2:+10374186 | None:intergenic |
| TATAGAATCAACATTCTTAA+TGG | 0.251411 | 8_2:-10375263 | Msa1233590:CDS |
| ATTCTGAACTGCAAGCATTT+TGG | 0.253825 | 8_2:-10374774 | Msa1233590:CDS |
| GACTGGCCTGCTCCCAAAAT+TGG | 0.265639 | 8_2:+10377455 | None:intergenic |
| TACCTAATGATCTACTTAAA+AGG | 0.269659 | 8_2:-10375177 | Msa1233590:intron |
| TTTAGGAGGTGGAAACTTTA+GGG | 0.285322 | 8_2:+10376362 | None:intergenic |
| TAGATACCTTGAATCACTTT+AGG | 0.292784 | 8_2:+10376345 | None:intergenic |
| GTTTAGCTGTAACTGTTCTT+TGG | 0.296790 | 8_2:+10375974 | None:intergenic |
| GCTTCAACACCTTCCTTTGC+AGG | 0.298053 | 8_2:+10375602 | None:intergenic |
| ATTATGTTTGTTTGTTTGTT+TGG | 0.299269 | 8_2:-10374104 | Msa1233590:three_prime_UTR |
| GAAATACAAGAGTTTATGTT+TGG | 0.320716 | 8_2:-10373998 | Msa1233590:three_prime_UTR |
| CTGCTGATGGACTCGAGATA+TGG | 0.322340 | 8_2:-10374867 | Msa1233590:CDS |
| AGGTTGGCTCGTCCCGTTAT+TGG | 0.330318 | 8_2:-10376866 | Msa1233590:CDS |
| TCATCAAAGCTATTAAATTC+TGG | 0.331266 | 8_2:+10376492 | None:intergenic |
| GAAGAATTGAAGACTTTAAG+AGG | 0.337498 | 8_2:-10376974 | Msa1233590:CDS |
| CATTAAATGGAGATACTATT+AGG | 0.340776 | 8_2:+10374199 | None:intergenic |
| TTCTGATTCACAGCCATTAG+AGG | 0.344188 | 8_2:-10374377 | Msa1233590:CDS |
| TCTCCATTTAATGAGTTTCA+TGG | 0.344237 | 8_2:-10374189 | Msa1233590:exon |
| GTAATTGCAGATTGTATTTG+AGG | 0.354275 | 8_2:+10376531 | None:intergenic |
| TGCTGTATTATATAAGGATT+GGG | 0.361705 | 8_2:-10375218 | Msa1233590:CDS |
| ATAGAATCAACATTCTTAAT+GGG | 0.362811 | 8_2:-10375262 | Msa1233590:CDS |
| ATTGTCTGCTGTATTATATA+AGG | 0.364894 | 8_2:-10375224 | Msa1233590:CDS |
| AGCAAGCTAAATGCTGAATA+TGG | 0.370132 | 8_2:-10376017 | Msa1233590:CDS |
| AATAGTGACATGGGAGTTCC+AGG | 0.372687 | 8_2:-10377407 | Msa1233590:CDS |
| TCTTCTCTATAGTAGACTAA+TGG | 0.377121 | 8_2:+10376995 | None:intergenic |
| AGAGTTGCATACAAAGTTGA+TGG | 0.380177 | 8_2:+10377304 | None:intergenic |
| CATTCATCATAGCAACAAAT+AGG | 0.380660 | 8_2:-10375393 | Msa1233590:CDS |
| AAGGTGTTGAAGCTTCTATT+TGG | 0.386060 | 8_2:-10375592 | Msa1233590:CDS |
| TCAGCATTTAGCTTGCTCTT+TGG | 0.386589 | 8_2:+10376023 | None:intergenic |
| TTGTTTGTTTGTTTGGTTGT+TGG | 0.388801 | 8_2:-10374097 | Msa1233590:three_prime_UTR |
| TTTAGTCAAAAGTGGATTCA+AGG | 0.389226 | 8_2:-10379161 | Msa1233590:CDS |
| TGACCAAATGCTTCATCTCT+TGG | 0.391905 | 8_2:+10376612 | None:intergenic |
| AGGAAGCGGAAAAGGGAAAG+TGG | 0.395527 | 8_2:-10377516 | Msa1233590:CDS |
| CTGCTGTATTATATAAGGAT+TGG | 0.398026 | 8_2:-10375219 | Msa1233590:CDS |
| AAGCTTGCACTATCCTCATA+TGG | 0.398096 | 8_2:-10374669 | Msa1233590:CDS |
| TTAGAGGCTTTCAAGAGGTT+TGG | 0.400753 | 8_2:-10374361 | Msa1233590:CDS |
| CCACCTCCTAAAGTGATTCA+AGG | 0.407448 | 8_2:-10376351 | Msa1233590:intron |
| TGGTATATTCATTACCTTGT+TGG | 0.409146 | 8_2:+10377235 | None:intergenic |
| TCAACTTTGTATGCAACTCT+TGG | 0.409868 | 8_2:-10377301 | Msa1233590:CDS |
| GGAGAGAAAACTTATATTGA+AGG | 0.414733 | 8_2:-10377494 | Msa1233590:CDS |
| CATTTAGCTTGCTCTTTGGT+GGG | 0.415059 | 8_2:+10376027 | None:intergenic |
| GCATTTAGCTTGCTCTTTGG+TGG | 0.416143 | 8_2:+10376026 | None:intergenic |
| TTAAGTATATATCCTCCATA+TGG | 0.416729 | 8_2:+10374604 | None:intergenic |
| GTCAATCCTTCCTCACTTGA+AGG | 0.416919 | 8_2:+10374235 | None:intergenic |
| CTTTCTTAGGCATGAGTCTC+CGG | 0.418058 | 8_2:+10374566 | None:intergenic |
| CATCCTCAGGCTGATAGCTT+TGG | 0.418449 | 8_2:-10375647 | Msa1233590:CDS |
| CTATTTGTTGCTATGATGAA+TGG | 0.420998 | 8_2:+10375394 | None:intergenic |
| CAAGAGGTTTGGAAGGAAGT+TGG | 0.421338 | 8_2:-10374350 | Msa1233590:CDS |
| ATATTTGTAGGAAGCGGAAA+AGG | 0.421470 | 8_2:-10377524 | Msa1233590:intron |
| AACCTCTTGAAAGCCTCTAA+TGG | 0.421972 | 8_2:+10374364 | None:intergenic |
| AAGCTATCAGCCTGAGGATG+TGG | 0.423011 | 8_2:+10375650 | None:intergenic |
| GTTCCAAGAGATGAAGCATT+TGG | 0.423704 | 8_2:-10376615 | Msa1233590:CDS |
| GGCAAGTAAACATCACTAAC+AGG | 0.428007 | 8_2:+10375623 | None:intergenic |
| AAGTTGATGGTTCCATGGTT+AGG | 0.428790 | 8_2:+10377317 | None:intergenic |
| GCGCTATAATTGACACCGCC+GGG | 0.430425 | 8_2:-10379120 | Msa1233590:CDS |
| TCATTAGGTAGTCCTTGATC+TGG | 0.433138 | 8_2:+10375190 | None:intergenic |
| GGAAGCAAGAGTTTATGAAT+AGG | 0.438914 | 8_2:+10375352 | None:intergenic |
| ACACATCATCAAAAGAATTC+AGG | 0.441238 | 8_2:-10376169 | Msa1233590:intron |
| CTACTTAGCTCAATGGCTAA+TGG | 0.442112 | 8_2:+10375674 | None:intergenic |
| TCGAGTCCATCAGCAGCATA+AGG | 0.442556 | 8_2:+10374874 | None:intergenic |
| TTGGCGCTTCTGTGGCTCTC+AGG | 0.442747 | 8_2:-10379090 | Msa1233590:CDS |
| TTCTATTTGGCTCCTTGCCA+AGG | 0.442825 | 8_2:-10375579 | Msa1233590:CDS |
| CGAAGGCCGTGTGGGGAAGT+TGG | 0.442945 | 8_2:+10374916 | None:intergenic |
| CAGCAAATTAAGATGTATGC+AGG | 0.449069 | 8_2:-10379295 | Msa1233590:exon |
| TGGAGAGAAGTTGTAGAGGT+GGG | 0.451733 | 8_2:-10374754 | Msa1233590:CDS |
| GACACCGCCGGGGCCTCCAT+TGG | 0.451850 | 8_2:-10379109 | Msa1233590:CDS |
| GTTTAAGATGCAAACTTGCT+TGG | 0.453416 | 8_2:-10374701 | Msa1233590:CDS |
| GCCAACCTTGCGTACTTGTC+AGG | 0.453757 | 8_2:+10376881 | None:intergenic |
| ATTTACAATAACATAGGCCT+TGG | 0.455004 | 8_2:+10375562 | None:intergenic |
| TTCTCAATATAAAATGCTCC+TGG | 0.455314 | 8_2:+10377389 | None:intergenic |
| GGCGCTATAATTGACACCGC+CGG | 0.459938 | 8_2:-10379121 | Msa1233590:CDS |
| CGGCCTTCGCCTTCTGATAG+AGG | 0.462912 | 8_2:-10374902 | Msa1233590:CDS |
| GAAGCAAGAGTTTATGAATA+GGG | 0.463724 | 8_2:+10375353 | None:intergenic |
| CACCTTCATTTCTCTGTCCA+AGG | 0.465414 | 8_2:+10374410 | None:intergenic |
| AGAAGCGCCAATGGAGGCCC+CGG | 0.465605 | 8_2:+10379102 | None:intergenic |
| CTTCCGAACTGATGGTGAAT+CGG | 0.470853 | 8_2:-10376385 | Msa1233590:CDS |
| CATGGTTAGGAATATCTTCA+AGG | 0.473639 | 8_2:+10377330 | None:intergenic |
| GAAGGATAAAGCAGAGTGTA+TGG | 0.476976 | 8_2:+10374253 | None:intergenic |
| CGGAGACTCATGCCTAAGAA+AGG | 0.480181 | 8_2:-10374565 | Msa1233590:CDS |
| ATGAGTCTCCGGCTCTTAGT+TGG | 0.483617 | 8_2:+10374577 | None:intergenic |
| ACCACTAGTTTAGTCAAAAG+TGG | 0.484472 | 8_2:-10379169 | Msa1233590:CDS |
| GTGTCGGATCCTCCAATAAC+GGG | 0.484538 | 8_2:+10376854 | None:intergenic |
| AGCATATGCCTTTGTTGTAT+CGG | 0.484620 | 8_2:+10375739 | None:intergenic |
| TACTCAGCAGACCCTTTCTT+AGG | 0.485780 | 8_2:+10374553 | None:intergenic |
| ACAAGACCTCTATAATTGTA+AGG | 0.487918 | 8_2:+10374458 | None:intergenic |
| TTGAAGACTTTAAGAGGAGA+TGG | 0.490311 | 8_2:-10376968 | Msa1233590:CDS |
| CTTTATCCTTCAAGTGAGGA+AGG | 0.493640 | 8_2:-10374241 | Msa1233590:CDS |
| TGCTGATGGACTCGAGATAT+GGG | 0.494856 | 8_2:-10374866 | Msa1233590:CDS |
| GTCTGCGCAAGGAACATGAT+AGG | 0.496596 | 8_2:-10376940 | Msa1233590:CDS |
| GCCTGCTCCCAAAATTGGTA+TGG | 0.499244 | 8_2:+10377460 | None:intergenic |
| CGAGTCCATCAGCAGCATAA+GGG | 0.499699 | 8_2:+10374875 | None:intergenic |
| GCTAAGTAGCCCACATCCTC+AGG | 0.499939 | 8_2:-10375660 | Msa1233590:CDS |
| CTTCAAGGGTCAAACTTACA+AGG | 0.503229 | 8_2:+10377345 | None:intergenic |
| CCTTGAATCACTTTAGGAGG+TGG | 0.505940 | 8_2:+10376351 | None:intergenic |
| AAGGAAGTTGGCTGAAATTG+AGG | 0.507352 | 8_2:-10374338 | Msa1233590:CDS |
| TAAGTATATATCCTCCATAT+GGG | 0.508811 | 8_2:+10374605 | None:intergenic |
| GGGCCGATTCACCATCAGTT+CGG | 0.517224 | 8_2:+10376382 | None:intergenic |
| TGTGATTAAGAGAGGCCAAA+AGG | 0.518374 | 8_2:-10379263 | Msa1233590:CDS |
| GGAAGCGGAAAAGGGAAAGT+GGG | 0.519463 | 8_2:-10377515 | Msa1233590:CDS |
| AATGGAGCTGGTGTTTCACT+TGG | 0.519813 | 8_2:+10377013 | None:intergenic |
| TTGGCTCGTCCCGTTATTGG+AGG | 0.520705 | 8_2:-10376863 | Msa1233590:CDS |
| TTTGCAAGGGAGATGATTGC+TGG | 0.521676 | 8_2:-10376201 | Msa1233590:CDS |
| GAAGTTGTAGAGGTGGGTCA+TGG | 0.521933 | 8_2:-10374748 | Msa1233590:CDS |
| AGAGAAATGAAGGTGAGGCT+TGG | 0.522300 | 8_2:-10374402 | Msa1233590:CDS |
| GGCCTCCATTGGCGCTTCTG+TGG | 0.522813 | 8_2:-10379098 | Msa1233590:CDS |
| AAGGAACTCTTCCGAACTGA+TGG | 0.522819 | 8_2:-10376393 | Msa1233590:CDS |
| TATATTGAGAATAACATGAC+AGG | 0.522986 | 8_2:-10377377 | Msa1233590:CDS |
| AGGCTTTCAAGAGGTTTGGA+AGG | 0.526553 | 8_2:-10374357 | Msa1233590:CDS |
| TGCACTTGCAAGGAGTGTCT+TGG | 0.531139 | 8_2:-10375302 | Msa1233590:CDS |
| TACCTTGGACAGAGAAATGA+AGG | 0.533440 | 8_2:-10374412 | Msa1233590:CDS |
| CACCTTGCCTTACCCTCGAA+GGG | 0.535336 | 8_2:-10376834 | Msa1233590:CDS |
| ACTTTAAGAGGAGATGGAAC+GGG | 0.535636 | 8_2:-10376962 | Msa1233590:CDS |
| CTACGATGTTTACAATGACT+TGG | 0.535774 | 8_2:-10376909 | Msa1233590:CDS |
| GACTTTAAGAGGAGATGGAA+CGG | 0.536078 | 8_2:-10376963 | Msa1233590:CDS |
| ATCTAGAGGAGTGGCTGTTG+AGG | 0.536381 | 8_2:-10374941 | Msa1233590:intron |
| AGATCCTAAAAGTGAGAGCC+GGG | 0.541238 | 8_2:-10376652 | Msa1233590:CDS |
| ATACAAAGTTGATGGTTCCA+TGG | 0.541812 | 8_2:+10377312 | None:intergenic |
| AGTTTGCTAAGTATACTAGT+AGG | 0.542543 | 8_2:+10376435 | None:intergenic |
| GTACTGAAGCAATCCATATG+AGG | 0.542584 | 8_2:+10374656 | None:intergenic |
| CAGATCCTAAAAGTGAGAGC+CGG | 0.544558 | 8_2:-10376653 | Msa1233590:CDS |
| AATGAATATCATATGCAGAC+TGG | 0.545927 | 8_2:+10377438 | None:intergenic |
| ATGTGGGCTACTTAGCTCAA+TGG | 0.548079 | 8_2:+10375667 | None:intergenic |
| TATTTGTAGGAAGCGGAAAA+GGG | 0.550518 | 8_2:-10377523 | Msa1233590:intron |
| GAGAGCCACAGAAGCGCCAA+TGG | 0.550963 | 8_2:+10379093 | None:intergenic |
| CAGTTACAGCTAAACATGGA+TGG | 0.551540 | 8_2:-10375966 | Msa1233590:CDS |
| CTATAGTAGACTAATGGAGC+TGG | 0.551845 | 8_2:+10377001 | None:intergenic |
| ATACCTTGAATCACTTTAGG+AGG | 0.553206 | 8_2:+10376348 | None:intergenic |
| AGTTACAGCTAAACATGGAT+GGG | 0.553988 | 8_2:-10375965 | Msa1233590:CDS |
| ACACCTTGCCTTACCCTCGA+AGG | 0.554207 | 8_2:-10376835 | Msa1233590:CDS |
| GGTGTCGGATCCTCCAATAA+CGG | 0.554285 | 8_2:+10376853 | None:intergenic |
| GACTACCCTTATGCTGCTGA+TGG | 0.554343 | 8_2:-10374880 | Msa1233590:CDS |
| TTCACCAACTTGTCAGCCAC+TGG | 0.557476 | 8_2:-10375529 | Msa1233590:intron |
| GCTTCTGATGAGCAATACCT+TGG | 0.559094 | 8_2:-10374427 | Msa1233590:CDS |
| AGAGTGTATGGCATATTCAC+AGG | 0.562287 | 8_2:+10374265 | None:intergenic |
| CACTGACCTTACAATTATAG+AGG | 0.562734 | 8_2:-10374464 | Msa1233590:CDS |
| CATTAGGTAGTCCTTGATCT+GGG | 0.563331 | 8_2:+10375191 | None:intergenic |
| TAAGAGAGGCCAAAAGGTGA+AGG | 0.563798 | 8_2:-10379257 | Msa1233590:CDS |
| GGAGACTCATGCCTAAGAAA+GGG | 0.566816 | 8_2:-10374564 | Msa1233590:CDS |
| TCAGAAGGCGAAGGCCGTGT+GGG | 0.568063 | 8_2:+10374908 | None:intergenic |
| AGATGGAACGGGTCTGCGCA+AGG | 0.569383 | 8_2:-10376951 | Msa1233590:CDS |
| GAGCTGGTGTTTCACTTGGA+AGG | 0.572257 | 8_2:+10377017 | None:intergenic |
| GTCTCCGGCTCTTAGTTGGT+CGG | 0.573160 | 8_2:+10374581 | None:intergenic |
| AGCTATCAGCCTGAGGATGT+GGG | 0.574193 | 8_2:+10375651 | None:intergenic |
| GAGCAGTTAATCAGTCTGCA+TGG | 0.576806 | 8_2:-10376239 | Msa1233590:intron |
| TTGGAGAGAAGTTGTAGAGG+TGG | 0.579539 | 8_2:-10374755 | Msa1233590:CDS |
| TTCGACATCAATGCCATCAG+TGG | 0.580057 | 8_2:-10379205 | Msa1233590:CDS |
| ATGGTTAGGAATATCTTCAA+GGG | 0.581486 | 8_2:+10377331 | None:intergenic |
| ATGGGATGCTATCAAGTCAT+GGG | 0.582556 | 8_2:-10374848 | Msa1233590:CDS |
| AGAGTCATTTACAATAACAT+AGG | 0.582694 | 8_2:+10375556 | None:intergenic |
| GCTTTCTAAGAACTTTCAGA+AGG | 0.585522 | 8_2:-10374524 | Msa1233590:CDS |
| ATCAGTGCTACCGCTTCTGA+TGG | 0.586071 | 8_2:-10379064 | Msa1233590:intron |
| GTAGTCAAATTACCTCATCA+TGG | 0.587071 | 8_2:-10374134 | Msa1233590:three_prime_UTR |
| AGTCATTGAGAAACCGATAC+GGG | 0.587451 | 8_2:-10374288 | Msa1233590:CDS |
| TTGAGGCAAAGCTCATTGAA+AGG | 0.587750 | 8_2:-10374321 | Msa1233590:CDS |
| TATGGGATGCTATCAAGTCA+TGG | 0.588056 | 8_2:-10374849 | Msa1233590:CDS |
| TGTACCAGTGGCTGACAAGT+TGG | 0.589181 | 8_2:+10375525 | None:intergenic |
| AGCCACAGAAGCGCCAATGG+AGG | 0.592809 | 8_2:+10379096 | None:intergenic |
| GAACGTAAACAAAGTCGTCC+CGG | 0.593794 | 8_2:+10376634 | None:intergenic |
| GACTGATGAAGAATTTGCAA+GGG | 0.596706 | 8_2:-10376214 | Msa1233590:CDS |
| TGATGTTTACTTGCCTGCAA+AGG | 0.596844 | 8_2:-10375615 | Msa1233590:CDS |
| CTAGTAGTGCAAATTTGCAA+TGG | 0.598035 | 8_2:-10373939 | Msa1233590:intron |
| GAGTCATTGAGAAACCGATA+CGG | 0.598611 | 8_2:-10374289 | Msa1233590:CDS |
| ATCAGAAGGCGAAGGCCGTG+TGG | 0.599096 | 8_2:+10374907 | None:intergenic |
| GAGGAAGGATTGACTTGCAG+AGG | 0.599561 | 8_2:-10374226 | Msa1233590:CDS |
| AACAAATAGGCATCTTAGCG+TGG | 0.603243 | 8_2:-10375380 | Msa1233590:CDS |
| ACGCATCTTCTTCGCCAACA+AGG | 0.603727 | 8_2:-10377249 | Msa1233590:intron |
| CTTGAAGATATTCCTAACCA+TGG | 0.606094 | 8_2:-10377329 | Msa1233590:CDS |
| TCCTGACAAGTACGCAAGGT+TGG | 0.606714 | 8_2:-10376882 | Msa1233590:CDS |
| TACGATGTTTACAATGACTT+GGG | 0.606736 | 8_2:-10376908 | Msa1233590:CDS |
| TTCATTGTGTCATGATAATG+TGG | 0.608493 | 8_2:+10375331 | None:intergenic |
| GATATGGATATATTGAGTCA+TGG | 0.608683 | 8_2:+10375780 | None:intergenic |
| TTGAAAAGTGTGATTAAGAG+AGG | 0.613449 | 8_2:-10379271 | Msa1233590:CDS |
| CAATAACATAGGCCTTGGCA+AGG | 0.615590 | 8_2:+10375567 | None:intergenic |
| AAGGGTAGTCCTCTATCAGA+AGG | 0.619758 | 8_2:+10374893 | None:intergenic |
| TAAGTTATTACCATCAGAAG+CGG | 0.620851 | 8_2:+10379054 | None:intergenic |
| ACTCAATATATCCATATCTG+AGG | 0.622340 | 8_2:-10375775 | Msa1233590:CDS |
| TTTGGTCAATACCCATATGG+AGG | 0.625329 | 8_2:-10374616 | Msa1233590:CDS |
| TTAACCGACCAACTAAGAGC+CGG | 0.627312 | 8_2:-10374585 | Msa1233590:CDS |
| CAGAAGGCGAAGGCCGTGTG+GGG | 0.628083 | 8_2:+10374909 | None:intergenic |
| GTTTACTTGCCTGCAAAGGA+AGG | 0.628654 | 8_2:-10375611 | Msa1233590:CDS |
| GAGTGTCTTGGTAAATGCAG+AGG | 0.628961 | 8_2:-10375290 | Msa1233590:CDS |
| TATAATTGTAAGGTCAGTGA+GGG | 0.630957 | 8_2:+10374468 | None:intergenic |
| ACTTTCAGAAGGCGTATCTG+AGG | 0.634152 | 8_2:-10374513 | Msa1233590:CDS |
| AGAACAGTTACAGCTAAACA+TGG | 0.634430 | 8_2:-10375970 | Msa1233590:CDS |
| TTTGAATGGAATAGTGACAT+GGG | 0.637458 | 8_2:-10377416 | Msa1233590:CDS |
| TGAACATTAATGCACTTGCA+AGG | 0.638089 | 8_2:-10375312 | Msa1233590:CDS |
| AAATGCAGCCGATACAACAA+AGG | 0.638731 | 8_2:-10375747 | Msa1233590:CDS |
| CGCTATAATTGACACCGCCG+GGG | 0.640358 | 8_2:-10379119 | Msa1233590:CDS |
| AGTGTCTTGGTAAATGCAGA+GGG | 0.642136 | 8_2:-10375289 | Msa1233590:CDS |
| AGCAAATTAAGATGTATGCA+GGG | 0.642640 | 8_2:-10379294 | Msa1233590:exon |
| TCTGCTTTATCCTTCAAGTG+AGG | 0.644857 | 8_2:-10374245 | Msa1233590:CDS |
| ACATGTCTAACACATACAAG+AGG | 0.648178 | 8_2:+10374026 | None:intergenic |
| AAGAGAGGCCAAAAGGTGAA+GGG | 0.652859 | 8_2:-10379256 | Msa1233590:CDS |
| TGACTGATGAAGAATTTGCA+AGG | 0.653058 | 8_2:-10376215 | Msa1233590:CDS |
| GGTGTCAATTATAGCGCCGG+CGG | 0.653936 | 8_2:+10379126 | None:intergenic |
| TCGAGGGTAAGGCAAGGTGT+CGG | 0.654212 | 8_2:+10376838 | None:intergenic |
| AGCGCCAATGGAGGCCCCGG+CGG | 0.656187 | 8_2:+10379105 | None:intergenic |
| CAATTATAGAGGTCTTGTCA+AGG | 0.656805 | 8_2:-10374453 | Msa1233590:CDS |
| AGCCATTAGAGGCTTTCAAG+AGG | 0.658271 | 8_2:-10374366 | Msa1233590:CDS |
| ACCTTGCCTTACCCTCGAAG+GGG | 0.659200 | 8_2:-10376833 | Msa1233590:CDS |
| ATAATAACATGACCATGATG+AGG | 0.659580 | 8_2:+10374122 | None:intergenic |
| GAGGATCCAACTTCCCCACA+CGG | 0.660763 | 8_2:-10374922 | Msa1233590:CDS |
| TGGACAGAGAAATGAAGGTG+AGG | 0.663208 | 8_2:-10374407 | Msa1233590:CDS |
| GCATGCTATATCTAGAGGAG+TGG | 0.665208 | 8_2:-10374950 | Msa1233590:intron |
| GTTACAGCTAAACATGGATG+GGG | 0.665834 | 8_2:-10375964 | Msa1233590:CDS |
| GTGATCCTGACAAGTACGCA+AGG | 0.672694 | 8_2:-10376886 | Msa1233590:CDS |
| AGTCCTCTATCAGAAGGCGA+AGG | 0.676314 | 8_2:+10374899 | None:intergenic |
| CCTTGCCTTACCCTCGAAGG+GGG | 0.681885 | 8_2:-10376832 | Msa1233590:CDS |
| CTATAATTGTAAGGTCAGTG+AGG | 0.692089 | 8_2:+10374467 | None:intergenic |
| GGACCAAAGCTATCAGCCTG+AGG | 0.704451 | 8_2:+10375644 | None:intergenic |
| GTGATTTGAAGAATGCTACA+TGG | 0.707488 | 8_2:-10374726 | Msa1233590:CDS |
| CCAAAAGGTGAAGGGCACAG+TGG | 0.713521 | 8_2:-10379248 | Msa1233590:CDS |
| ATTTGAAGAATGCTACATGG+TGG | 0.753052 | 8_2:-10374723 | Msa1233590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTTTGTTTTTTTTTTTA+GGG | + | chr8_2:10374640-10374659 | None:intergenic | 10.0% |
| !! | ATATTTAACCTTAAAATAAT+TGG | - | chr8_2:10375114-10375133 | Msa1233590:intron | 10.0% |
| !! | TATTTAACCTTAAAATAATT+GGG | - | chr8_2:10375115-10375134 | Msa1233590:intron | 10.0% |
| !! | AAAAAAAAAAAATTAATAGC+AGG | - | chr8_2:10375267-10375286 | Msa1233590:CDS | 10.0% |
| !! | AAAAAAAAAAATTAATAGCA+GGG | - | chr8_2:10375268-10375287 | Msa1233590:CDS | 10.0% |
| !! | TAAATATTGTATTATTAGTA+TGG | + | chr8_2:10375403-10375422 | None:intergenic | 10.0% |
| !!! | CATTATTAATCATTTTTTTA+AGG | - | chr8_2:10375541-10375560 | Msa1233590:CDS | 10.0% |
| !! | TATAGTAAATAAAAATATCA+TGG | - | chr8_2:10376909-10376928 | Msa1233590:CDS | 10.0% |
| !!! | TAAATTATATTTTGTTGAAT+AGG | - | chr8_2:10377357-10377376 | Msa1233590:CDS | 10.0% |
| !!! | CTTTTTGTTTTTTTTTTTAG+GGG | + | chr8_2:10374639-10374658 | None:intergenic | 15.0% |
| !!! | CTCTTTTTGTTTTTTTTTTT+AGG | + | chr8_2:10374641-10374660 | None:intergenic | 15.0% |
| !! | AAAAAAAATCTAATTTGAGA+CGG | + | chr8_2:10374736-10374755 | None:intergenic | 15.0% |
| !!! | TCTCTTTTATAATACTAATA+AGG | - | chr8_2:10374784-10374803 | Msa1233590:CDS | 15.0% |
| !!! | CTCTTTTATAATACTAATAA+GGG | - | chr8_2:10374785-10374804 | Msa1233590:CDS | 15.0% |
| !! | AAAACATTTAATGAAATGTA+GGG | + | chr8_2:10375329-10375348 | None:intergenic | 15.0% |
| !! | AAAAACATTTAATGAAATGT+AGG | + | chr8_2:10375328-10375347 | None:intergenic | 15.0% |
| !! | TATTTAACCCTAAAATAATT+GGG | + | chr8_2:10374968-10374987 | None:intergenic | 15.0% |
| !! | ATATTTAACCCTAAAATAAT+TGG | + | chr8_2:10374969-10374988 | None:intergenic | 15.0% |
| !! | TTAAAATCCCTAAAATAATA+AGG | + | chr8_2:10375032-10375051 | None:intergenic | 15.0% |
| !! | AAAACATTTATTGAAATGTA+AGG | - | chr8_2:10375051-10375070 | Msa1233590:intron | 15.0% |
| !!! | TTTAAGGTTAAATATGTTTT+TGG | + | chr8_2:10375109-10375128 | None:intergenic | 15.0% |
| !! | AAAAACATTTAATGAAATGT+AGG | - | chr8_2:10375328-10375347 | Msa1233590:CDS | 15.0% |
| !! | AAAACATTTAATGAAATGTA+GGG | - | chr8_2:10375329-10375348 | Msa1233590:CDS | 15.0% |
| !!! | TGTTGATTTTAATGATAAAT+AGG | + | chr8_2:10375523-10375542 | None:intergenic | 15.0% |
| !!! | ATATTTTAATCCTTAACATT+AGG | - | chr8_2:10376074-10376093 | Msa1233590:intron | 15.0% |
| !!! | TATTTTAATCCTTAACATTA+GGG | - | chr8_2:10376075-10376094 | Msa1233590:intron | 15.0% |
| !! | GAAATATAGTTCATATTTAA+AGG | + | chr8_2:10376116-10376135 | None:intergenic | 15.0% |
| !!! | CTATATTTTAATTGATTTGA+TGG | + | chr8_2:10376152-10376171 | None:intergenic | 15.0% |
| !! | AAAGTTCTATCTTAAATTAA+TGG | - | chr8_2:10376424-10376443 | Msa1233590:CDS | 15.0% |
| !!! | TTACTTGTTATATATAATGT+AGG | - | chr8_2:10377140-10377159 | Msa1233590:intron | 15.0% |
| !!! | CTAGTAACTAATTTTTTTTA+AGG | + | chr8_2:10378046-10378065 | None:intergenic | 15.0% |
| !!! | GATTTTTAAATTTCTATTGT+AGG | + | chr8_2:10378173-10378192 | None:intergenic | 15.0% |
| !! | CAATAGAAATTTAAAAATCT+TGG | - | chr8_2:10378174-10378193 | Msa1233590:intron | 15.0% |
| !! | ATCATTATGATAAGTTAATG+AGG | + | chr8_2:10374495-10374514 | None:intergenic | 20.0% |
| !!! | TATCATAATGATTTTTGACT+TGG | - | chr8_2:10374503-10374522 | Msa1233590:CDS | 20.0% |
| !!! | ATCATAATGATTTTTGACTT+GGG | - | chr8_2:10374504-10374523 | Msa1233590:CDS | 20.0% |
| !!! | GTTACATCAATAACATTTTA+AGG | + | chr8_2:10374592-10374611 | None:intergenic | 20.0% |
| !!! | TTTAGGGTTAAATATGTTTT+TGG | - | chr8_2:10374974-10374993 | Msa1233590:intron | 20.0% |
| !!! | AGAATAGTCCTTATTATTTT+AGG | - | chr8_2:10375021-10375040 | Msa1233590:intron | 20.0% |
| !!! | GAATAGTCCTTATTATTTTA+GGG | - | chr8_2:10375022-10375041 | Msa1233590:intron | 20.0% |
| !! | TGATTGAAATACAATAGATA+AGG | + | chr8_2:10375448-10375467 | None:intergenic | 20.0% |
| !!! | CATATGATATTCATTTTGAA+TGG | - | chr8_2:10375764-10375783 | Msa1233590:CDS | 20.0% |
| !!! | AAATTATAACCTTTTTTAGC+TGG | + | chr8_2:10376403-10376422 | None:intergenic | 20.0% |
| !! | TGAAAATATAGTATGTTAAG+TGG | + | chr8_2:10377104-10377123 | None:intergenic | 20.0% |
| !!! | ATCATTTTCTTACAAAATGA+TGG | - | chr8_2:10377487-10377506 | Msa1233590:CDS | 20.0% |
| !! | TATAGAATCAACATTCTTAA+TGG | - | chr8_2:10377931-10377950 | Msa1233590:intron | 20.0% |
| !! | ATAGAATCAACATTCTTAAT+GGG | - | chr8_2:10377932-10377951 | Msa1233590:intron | 20.0% |
| !! | AGTCATTCATTAGTTAAAAA+AGG | - | chr8_2:10378064-10378083 | Msa1233590:intron | 20.0% |
| !! | ATTATGTTTGTTTGTTTGTT+TGG | - | chr8_2:10379090-10379109 | Msa1233590:CDS | 20.0% |
| !! | AAAATTAATTAACAACACCA+AGG | - | chr8_2:10379221-10379240 | Msa1233590:CDS | 20.0% |
| ! | TTTCAAGCTTCTTTAAATCA+TGG | - | chr8_2:10374252-10374271 | Msa1233590:CDS | 25.0% |
| ! | AACTACTGTTAATTCTCTAA+CGG | + | chr8_2:10375166-10375185 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTGTGGTGAC+CGG | + | chr8_2:10375256-10375275 | None:intergenic | 25.0% |
| !!! | ATGTAGGGATTATTTTTCAA+AGG | - | chr8_2:10375344-10375363 | Msa1233590:CDS | 25.0% |
| !!! | TGTAGGGATTATTTTTCAAA+GGG | - | chr8_2:10375345-10375364 | Msa1233590:CDS | 25.0% |
| !!! | TGTCACATTTAAGTTTTATG+CGG | + | chr8_2:10375591-10375610 | None:intergenic | 25.0% |
| ! | CAAACTTGTAACATATTTGT+AGG | - | chr8_2:10375658-10375677 | Msa1233590:CDS | 25.0% |
| ! | TATATTGAGAATAACATGAC+AGG | - | chr8_2:10375817-10375836 | Msa1233590:CDS | 25.0% |
| ! | TTTAACATGCACGATAAATA+TGG | + | chr8_2:10375982-10376001 | None:intergenic | 25.0% |
| !!! | AGAGAAAATGTTTTGATCAT+AGG | + | chr8_2:10376451-10376470 | None:intergenic | 25.0% |
| ! | TCATCAAAGCTATTAAATTC+TGG | + | chr8_2:10376705-10376724 | None:intergenic | 25.0% |
| ! | TGATTAACTGCTCAAAATAA+GGG | + | chr8_2:10376948-10376967 | None:intergenic | 25.0% |
| ! | AGAGTCATTTACAATAACAT+AGG | + | chr8_2:10377641-10377660 | None:intergenic | 25.0% |
| ! | ATTGTCTGCTGTATTATATA+AGG | - | chr8_2:10377970-10377989 | Msa1233590:intron | 25.0% |
| ! | TGCTGTATTATATAAGGATT+GGG | - | chr8_2:10377976-10377995 | Msa1233590:intron | 25.0% |
| ! | TACCTAATGATCTACTTAAA+AGG | - | chr8_2:10378017-10378036 | Msa1233590:intron | 25.0% |
| !!! | TACCTTTTAAGTAGATCATT+AGG | + | chr8_2:10378022-10378041 | None:intergenic | 25.0% |
| ! | TAAGTATATATCCTCCATAT+GGG | + | chr8_2:10378592-10378611 | None:intergenic | 25.0% |
| ! | TTAAGTATATATCCTCCATA+TGG | + | chr8_2:10378593-10378612 | None:intergenic | 25.0% |
| ! | CATTAAATGGAGATACTATT+AGG | + | chr8_2:10378998-10379017 | None:intergenic | 25.0% |
| ! | AAACCATGAAACTCATTAAA+TGG | + | chr8_2:10379011-10379030 | None:intergenic | 25.0% |
| ! | GAAATACAAGAGTTTATGTT+TGG | - | chr8_2:10379196-10379215 | Msa1233590:CDS | 25.0% |
| AGCAAATTAAGATGTATGCA+GGG | - | chr8_2:10373900-10373919 | Msa1233590:three_prime_UTR | 30.0% | |
| ! | TTGAAAAGTGTGATTAAGAG+AGG | - | chr8_2:10373923-10373942 | Msa1233590:three_prime_UTR | 30.0% |
| ! | TTTAGTCAAAAGTGGATTCA+AGG | - | chr8_2:10374033-10374052 | Msa1233590:three_prime_UTR | 30.0% |
| TAAGTTATTACCATCAGAAG+CGG | + | chr8_2:10374143-10374162 | None:intergenic | 30.0% | |
| TAATAGCATGTTTGTGTAAG+CGG | - | chr8_2:10374177-10374196 | Msa1233590:three_prime_UTR | 30.0% | |
| ! | TTATGGTGTGTTTGAAATCA+CGG | + | chr8_2:10374314-10374333 | None:intergenic | 30.0% |
| ! | ACGATCATTATGTAGTCTTA+TGG | + | chr8_2:10374331-10374350 | None:intergenic | 30.0% |
| !!! | GGGGAAAATTACTCTTTTTT+TGG | + | chr8_2:10374620-10374639 | None:intergenic | 30.0% |
| ! | AACATCTGATTTAAGACAGA+GGG | + | chr8_2:10374704-10374723 | None:intergenic | 30.0% |
| ! | AAACATCTGATTTAAGACAG+AGG | + | chr8_2:10374705-10374724 | None:intergenic | 30.0% |
| ! | AAAATCTAATTTGAGACGGA+GGG | + | chr8_2:10374732-10374751 | None:intergenic | 30.0% |
| ! | AAAAATCTAATTTGAGACGG+AGG | + | chr8_2:10374733-10374752 | None:intergenic | 30.0% |
| TGTAGGGATTATTCTTCAAA+GGG | + | chr8_2:10374843-10374862 | None:intergenic | 30.0% | |
| ATGTAGGGATTATTCTTCAA+AGG | + | chr8_2:10374844-10374863 | None:intergenic | 30.0% | |
| !! | GCAGAGACTAATTTTGATAA+CGG | + | chr8_2:10374903-10374922 | None:intergenic | 30.0% |
| CTCTGCTGTTAATTCTTTAA+CGG | - | chr8_2:10374917-10374936 | Msa1233590:CDS | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr8_2:10375215-10375234 | Msa1233590:CDS | 30.0% | |
| !!! | TTTTTTTTTTTGTGGTGACC+GGG | + | chr8_2:10375255-10375274 | None:intergenic | 30.0% |
| !! | GTAGGGATTATTTTTCAAAG+GGG | - | chr8_2:10375346-10375365 | Msa1233590:CDS | 30.0% |
| TGTAACATATTTGTAGGAAG+CGG | - | chr8_2:10375664-10375683 | Msa1233590:CDS | 30.0% | |
| GGAGAGAAAACTTATATTGA+AGG | - | chr8_2:10375700-10375719 | Msa1233590:CDS | 30.0% | |
| !! | TGTTACTTCCATACCAATTT+TGG | - | chr8_2:10375726-10375745 | Msa1233590:CDS | 30.0% |
| ! | GTTACTTCCATACCAATTTT+GGG | - | chr8_2:10375727-10375746 | Msa1233590:CDS | 30.0% |
| AATGAATATCATATGCAGAC+TGG | + | chr8_2:10375759-10375778 | None:intergenic | 30.0% | |
| ! | TTTTGAATGGAATAGTGACA+TGG | - | chr8_2:10375777-10375796 | Msa1233590:CDS | 30.0% |
| TTTGAATGGAATAGTGACAT+GGG | - | chr8_2:10375778-10375797 | Msa1233590:CDS | 30.0% | |
| TTCTCAATATAAAATGCTCC+TGG | + | chr8_2:10375808-10375827 | None:intergenic | 30.0% | |
| ATGGTTAGGAATATCTTCAA+GGG | + | chr8_2:10375866-10375885 | None:intergenic | 30.0% | |
| TGGTATATTCATTACCTTGT+TGG | + | chr8_2:10375962-10375981 | None:intergenic | 30.0% | |
| ! | ATAGTGAAGTGTTAACACAT+TGG | - | chr8_2:10376003-10376022 | Msa1233590:CDS | 30.0% |
| TCTTCTCTATAGTAGACTAA+TGG | + | chr8_2:10376202-10376221 | None:intergenic | 30.0% | |
| GAAGAATTGAAGACTTTAAG+AGG | - | chr8_2:10376220-10376239 | Msa1233590:CDS | 30.0% | |
| TACGATGTTTACAATGACTT+GGG | - | chr8_2:10376286-10376305 | Msa1233590:intron | 30.0% | |
| GTAATTGCAGATTGTATTTG+AGG | + | chr8_2:10376666-10376685 | None:intergenic | 30.0% | |
| !! | AGTTTGCTAAGTATACTAGT+AGG | + | chr8_2:10376762-10376781 | None:intergenic | 30.0% |
| AGTTCCTTGAAAAATGGTAT+GGG | + | chr8_2:10376789-10376808 | None:intergenic | 30.0% | |
| TAGATACCTTGAATCACTTT+AGG | + | chr8_2:10376852-10376871 | None:intergenic | 30.0% | |
| CTATACGAAAATACATTGCT+AGG | + | chr8_2:10376894-10376913 | None:intergenic | 30.0% | |
| CTGATTAACTGCTCAAAATA+AGG | + | chr8_2:10376949-10376968 | None:intergenic | 30.0% | |
| !!! | TGAATTCTTTTGATGATGTG+TGG | + | chr8_2:10377026-10377045 | None:intergenic | 30.0% |
| ACACATCATCAAAAGAATTC+AGG | - | chr8_2:10377025-10377044 | Msa1233590:CDS | 30.0% | |
| !!! | GTATGTAAAGCTTGTTGTTT+TGG | + | chr8_2:10377387-10377406 | None:intergenic | 30.0% |
| GATATGGATATATTGAGTCA+TGG | + | chr8_2:10377417-10377436 | None:intergenic | 30.0% | |
| ACTCAATATATCCATATCTG+AGG | - | chr8_2:10377419-10377438 | Msa1233590:CDS | 30.0% | |
| !! | GCATTTATTTTCCTCAGATA+TGG | + | chr8_2:10377433-10377452 | None:intergenic | 30.0% |
| ATTTACAATAACATAGGCCT+TGG | + | chr8_2:10377635-10377654 | None:intergenic | 30.0% | |
| TGAATATCTACATGTGTAAC+AGG | - | chr8_2:10377753-10377772 | Msa1233590:intron | 30.0% | |
| ! | CTATTTGTTGCTATGATGAA+TGG | + | chr8_2:10377803-10377822 | None:intergenic | 30.0% |
| CATTCATCATAGCAACAAAT+AGG | - | chr8_2:10377801-10377820 | Msa1233590:intron | 30.0% | |
| GAAGCAAGAGTTTATGAATA+GGG | + | chr8_2:10377844-10377863 | None:intergenic | 30.0% | |
| ! | TTCATTGTGTCATGATAATG+TGG | + | chr8_2:10377866-10377885 | None:intergenic | 30.0% |
| CTGCTGTATTATATAAGGAT+TGG | - | chr8_2:10377975-10377994 | Msa1233590:intron | 30.0% | |
| !! | AATTTTGGTCAATACCCATA+TGG | - | chr8_2:10378575-10378594 | Msa1233590:intron | 30.0% |
| TATAATTGTAAGGTCAGTGA+GGG | + | chr8_2:10378729-10378748 | None:intergenic | 30.0% | |
| ACAAGACCTCTATAATTGTA+AGG | + | chr8_2:10378739-10378758 | None:intergenic | 30.0% | |
| TCTCCATTTAATGAGTTTCA+TGG | - | chr8_2:10379005-10379024 | Msa1233590:intron | 30.0% | |
| ATAATAACATGACCATGATG+AGG | + | chr8_2:10379075-10379094 | None:intergenic | 30.0% | |
| TTGTTTGTTTGTTTGGTTGT+TGG | - | chr8_2:10379097-10379116 | Msa1233590:CDS | 30.0% | |
| CAGCAAATTAAGATGTATGC+AGG | - | chr8_2:10373899-10373918 | Msa1233590:three_prime_UTR | 35.0% | |
| ! | ACCACTAGTTTAGTCAAAAG+TGG | - | chr8_2:10374025-10374044 | Msa1233590:three_prime_UTR | 35.0% |
| !! | TCCACTTTTGACTAAACTAG+TGG | + | chr8_2:10374029-10374048 | None:intergenic | 35.0% |
| CCAAACATTATATGTGTGTG+CGG | + | chr8_2:10374369-10374388 | None:intergenic | 35.0% | |
| ! | AAATCTAATTTGAGACGGAG+GGG | + | chr8_2:10374731-10374750 | None:intergenic | 35.0% |
| GTAGGGATTATTCTTCAAAG+GGG | + | chr8_2:10374842-10374861 | None:intergenic | 35.0% | |
| !! | GATAACGGAGATAAAATGTG+AGG | + | chr8_2:10374888-10374907 | None:intergenic | 35.0% |
| !! | TAGTGGGTCCCAATTATTTT+AGG | - | chr8_2:10374957-10374976 | Msa1233590:intron | 35.0% |
| !! | AGTGGGTCCCAATTATTTTA+GGG | - | chr8_2:10374958-10374977 | Msa1233590:intron | 35.0% |
| TTCAAAGTCACGCAAAATGT+AGG | - | chr8_2:10375081-10375100 | Msa1233590:intron | 35.0% | |
| TCAAAGTCACGCAAAATGTA+GGG | - | chr8_2:10375082-10375101 | Msa1233590:intron | 35.0% | |
| !! | AGTGGGTCCCAATTATTTTA+AGG | + | chr8_2:10374958-10374977 | None:intergenic | 35.0% |
| TGCATAATATATGCAAGGTC+TGG | - | chr8_2:10375220-10375239 | Msa1233590:CDS | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | - | chr8_2:10375221-10375240 | Msa1233590:CDS | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | - | chr8_2:10375222-10375241 | Msa1233590:CDS | 35.0% | |
| !!! | TTTTTTTTTTGTGGTGACCG+GGG | + | chr8_2:10375254-10375273 | None:intergenic | 35.0% |
| GATTGCGGAGATAAAATGTT+AGG | - | chr8_2:10375300-10375319 | Msa1233590:CDS | 35.0% | |
| ATATTTGTAGGAAGCGGAAA+AGG | - | chr8_2:10375670-10375689 | Msa1233590:CDS | 35.0% | |
| TATTTGTAGGAAGCGGAAAA+GGG | - | chr8_2:10375671-10375690 | Msa1233590:CDS | 35.0% | |
| CATGGTTAGGAATATCTTCA+AGG | + | chr8_2:10375867-10375886 | None:intergenic | 35.0% | |
| CTTGAAGATATTCCTAACCA+TGG | - | chr8_2:10375865-10375884 | Msa1233590:intron | 35.0% | |
| !! | ATACAAAGTTGATGGTTCCA+TGG | + | chr8_2:10375885-10375904 | None:intergenic | 35.0% |
| AGAGTTGCATACAAAGTTGA+TGG | + | chr8_2:10375893-10375912 | None:intergenic | 35.0% | |
| TCAACTTTGTATGCAACTCT+TGG | - | chr8_2:10375893-10375912 | Msa1233590:intron | 35.0% | |
| TAACAAGTGCCCTAATGTTA+AGG | + | chr8_2:10376087-10376106 | None:intergenic | 35.0% | |
| !! | ATTTGATGGTGTCAGATTTC+GGG | + | chr8_2:10376138-10376157 | None:intergenic | 35.0% |
| !! | GATTTGATGGTGTCAGATTT+CGG | + | chr8_2:10376139-10376158 | None:intergenic | 35.0% |
| ! | TTGAAGACTTTAAGAGGAGA+TGG | - | chr8_2:10376226-10376245 | Msa1233590:CDS | 35.0% |
| CTACGATGTTTACAATGACT+TGG | - | chr8_2:10376285-10376304 | Msa1233590:intron | 35.0% | |
| ! | GATGTGCGATCATTTTATGA+TGG | - | chr8_2:10376723-10376742 | Msa1233590:intron | 35.0% |
| ! | TGCGATCATTTTATGATGGT+GGG | - | chr8_2:10376727-10376746 | Msa1233590:intron | 35.0% |
| GTTCCTTGAAAAATGGTATG+GGG | + | chr8_2:10376788-10376807 | None:intergenic | 35.0% | |
| GAGTTCCTTGAAAAATGGTA+TGG | + | chr8_2:10376790-10376809 | None:intergenic | 35.0% | |
| TTTAGGAGGTGGAAACTTTA+GGG | + | chr8_2:10376835-10376854 | None:intergenic | 35.0% | |
| ATACCTTGAATCACTTTAGG+AGG | + | chr8_2:10376849-10376868 | None:intergenic | 35.0% | |
| TGACTGATGAAGAATTTGCA+AGG | - | chr8_2:10376979-10376998 | Msa1233590:CDS | 35.0% | |
| GACTGATGAAGAATTTGCAA+GGG | - | chr8_2:10376980-10376999 | Msa1233590:CDS | 35.0% | |
| AGCAAGCTAAATGCTGAATA+TGG | - | chr8_2:10377177-10377196 | Msa1233590:intron | 35.0% | |
| GTTTAGCTGTAACTGTTCTT+TGG | + | chr8_2:10377223-10377242 | None:intergenic | 35.0% | |
| AGAACAGTTACAGCTAAACA+TGG | - | chr8_2:10377224-10377243 | Msa1233590:intron | 35.0% | |
| AGTTACAGCTAAACATGGAT+GGG | - | chr8_2:10377229-10377248 | Msa1233590:intron | 35.0% | |
| ACTTTGCAAATGCTATGTTG+TGG | - | chr8_2:10377305-10377324 | Msa1233590:CDS | 35.0% | |
| ! | AGCATATGCCTTTGTTGTAT+CGG | + | chr8_2:10377458-10377477 | None:intergenic | 35.0% |
| !! | AAGGTGTTGAAGCTTCTATT+TGG | - | chr8_2:10377602-10377621 | Msa1233590:intron | 35.0% |
| CATCAACATAATTGTACCAG+TGG | + | chr8_2:10377684-10377703 | None:intergenic | 35.0% | |
| GGAAGCAAGAGTTTATGAAT+AGG | + | chr8_2:10377845-10377864 | None:intergenic | 35.0% | |
| TGAACATTAATGCACTTGCA+AGG | - | chr8_2:10377882-10377901 | Msa1233590:intron | 35.0% | |
| ! | AGTAACCACGATCTAAGATA+AGG | - | chr8_2:10378101-10378120 | Msa1233590:intron | 35.0% |
| TCTTTGCATGCTATATCTAG+AGG | - | chr8_2:10378239-10378258 | Msa1233590:intron | 35.0% | |
| ! | ATTCTGAACTGCAAGCATTT+TGG | - | chr8_2:10378420-10378439 | Msa1233590:intron | 35.0% |
| !! | ATTTTGGAGAGAAGTTGTAG+AGG | - | chr8_2:10378436-10378455 | Msa1233590:intron | 35.0% |
| GTGATTTGAAGAATGCTACA+TGG | - | chr8_2:10378468-10378487 | Msa1233590:intron | 35.0% | |
| ATTTGAAGAATGCTACATGG+TGG | - | chr8_2:10378471-10378490 | Msa1233590:intron | 35.0% | |
| ! | GTTTAAGATGCAAACTTGCT+TGG | - | chr8_2:10378493-10378512 | Msa1233590:intron | 35.0% |
| ! | CATCATGCAGCTGTTAATTT+TGG | - | chr8_2:10378560-10378579 | Msa1233590:intron | 35.0% |
| ! | GCTTTCTAAGAACTTTCAGA+AGG | - | chr8_2:10378670-10378689 | Msa1233590:intron | 35.0% |
| !!! | TCAGTGAGGGTATCATTTTT+TGG | + | chr8_2:10378716-10378735 | None:intergenic | 35.0% |
| CTATAATTGTAAGGTCAGTG+AGG | + | chr8_2:10378730-10378749 | None:intergenic | 35.0% | |
| CACTGACCTTACAATTATAG+AGG | - | chr8_2:10378730-10378749 | Msa1233590:intron | 35.0% | |
| ! | CAATTATAGAGGTCTTGTCA+AGG | - | chr8_2:10378741-10378760 | Msa1233590:intron | 35.0% |
| GTAGTCAAATTACCTCATCA+TGG | - | chr8_2:10379060-10379079 | Msa1233590:intron | 35.0% | |
| ACATGTCTAACACATACAAG+AGG | + | chr8_2:10379171-10379190 | None:intergenic | 35.0% | |
| ! | TACTAGATTTGCTCAAACCT+TGG | + | chr8_2:10379241-10379260 | None:intergenic | 35.0% |
| CTAGTAGTGCAAATTTGCAA+TGG | - | chr8_2:10379255-10379274 | Msa1233590:CDS | 35.0% | |
| TGTGATTAAGAGAGGCCAAA+AGG | - | chr8_2:10373931-10373950 | Msa1233590:three_prime_UTR | 40.0% | |
| CCGCACACACATATAATGTT+TGG | - | chr8_2:10374366-10374385 | Msa1233590:CDS | 40.0% | |
| TCTTTAACGGAATGCTGATG+TGG | - | chr8_2:10374930-10374949 | Msa1233590:CDS | 40.0% | |
| AATGCTGATGTGGTAGTTAG+TGG | - | chr8_2:10374940-10374959 | Msa1233590:intron | 40.0% | |
| ATGCTGATGTGGTAGTTAGT+GGG | - | chr8_2:10374941-10374960 | Msa1233590:intron | 40.0% | |
| ATGTTGATGTGGCAGTTAGT+GGG | + | chr8_2:10375142-10375161 | None:intergenic | 40.0% | |
| AATGTTGATGTGGCAGTTAG+TGG | + | chr8_2:10375143-10375162 | None:intergenic | 40.0% | |
| TCTCTAACGGAATGTTGATG+TGG | + | chr8_2:10375153-10375172 | None:intergenic | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+TGG | - | chr8_2:10375193-10375212 | Msa1233590:CDS | 40.0% |
| !!! | GCAGGGACTTATTTTGATTG+CGG | - | chr8_2:10375285-10375304 | Msa1233590:CDS | 40.0% |
| ATGTGACACCTAATGTGAGA+CGG | - | chr8_2:10375603-10375622 | Msa1233590:CDS | 40.0% | |
| CTTCAAGGGTCAAACTTACA+AGG | + | chr8_2:10375852-10375871 | None:intergenic | 40.0% | |
| !! | AAGTTGATGGTTCCATGGTT+AGG | + | chr8_2:10375880-10375899 | None:intergenic | 40.0% |
| CTATAGTAGACTAATGGAGC+TGG | + | chr8_2:10376196-10376215 | None:intergenic | 40.0% | |
| ! | GACTTTAAGAGGAGATGGAA+CGG | - | chr8_2:10376231-10376250 | Msa1233590:CDS | 40.0% |
| ! | ACTTTAAGAGGAGATGGAAC+GGG | - | chr8_2:10376232-10376251 | Msa1233590:CDS | 40.0% |
| ! | GTTCCAAGAGATGAAGCATT+TGG | - | chr8_2:10376579-10376598 | Msa1233590:CDS | 40.0% |
| TGACCAAATGCTTCATCTCT+TGG | + | chr8_2:10376585-10376604 | None:intergenic | 40.0% | |
| ! | GTGCGATCATTTTATGATGG+TGG | - | chr8_2:10376726-10376745 | Msa1233590:intron | 40.0% |
| !! | TAGCCCCATACCATTTTTCA+AGG | - | chr8_2:10376782-10376801 | Msa1233590:intron | 40.0% |
| CGGAAGAGTTCCTTGAAAAA+TGG | + | chr8_2:10376795-10376814 | None:intergenic | 40.0% | |
| ! | CTTTAGGAGGTGGAAACTTT+AGG | + | chr8_2:10376836-10376855 | None:intergenic | 40.0% |
| !! | CATTTAGCTTGCTCTTTGGT+GGG | + | chr8_2:10377170-10377189 | None:intergenic | 40.0% |
| !! | TCAGCATTTAGCTTGCTCTT+TGG | + | chr8_2:10377174-10377193 | None:intergenic | 40.0% |
| CAGTTACAGCTAAACATGGA+TGG | - | chr8_2:10377228-10377247 | Msa1233590:intron | 40.0% | |
| GTTACAGCTAAACATGGATG+GGG | - | chr8_2:10377230-10377249 | Msa1233590:intron | 40.0% | |
| AAATGCAGCCGATACAACAA+AGG | - | chr8_2:10377447-10377466 | Msa1233590:CDS | 40.0% | |
| CTACTTAGCTCAATGGCTAA+TGG | + | chr8_2:10377523-10377542 | None:intergenic | 40.0% | |
| GGCAAGTAAACATCACTAAC+AGG | + | chr8_2:10377574-10377593 | None:intergenic | 40.0% | |
| TGATGTTTACTTGCCTGCAA+AGG | - | chr8_2:10377579-10377598 | Msa1233590:intron | 40.0% | |
| AACAAATAGGCATCTTAGCG+TGG | - | chr8_2:10377814-10377833 | Msa1233590:intron | 40.0% | |
| AGTGTCTTGGTAAATGCAGA+GGG | - | chr8_2:10377905-10377924 | Msa1233590:intron | 40.0% | |
| CATTAGGTAGTCCTTGATCT+GGG | + | chr8_2:10378006-10378025 | None:intergenic | 40.0% | |
| TCATTAGGTAGTCCTTGATC+TGG | + | chr8_2:10378007-10378026 | None:intergenic | 40.0% | |
| TGATGCCTTATCTTAGATCG+TGG | + | chr8_2:10378109-10378128 | None:intergenic | 40.0% | |
| TTCTATTGTAGGCATGATCC+TGG | + | chr8_2:10378162-10378181 | None:intergenic | 40.0% | |
| TATGGGATGCTATCAAGTCA+TGG | - | chr8_2:10378345-10378364 | Msa1233590:intron | 40.0% | |
| ATGGGATGCTATCAAGTCAT+GGG | - | chr8_2:10378346-10378365 | Msa1233590:intron | 40.0% | |
| AAGCTTGCACTATCCTCATA+TGG | - | chr8_2:10378525-10378544 | Msa1233590:intron | 40.0% | |
| GTACTGAAGCAATCCATATG+AGG | + | chr8_2:10378541-10378560 | None:intergenic | 40.0% | |
| TTTGGTCAATACCCATATGG+AGG | - | chr8_2:10378578-10378597 | Msa1233590:intron | 40.0% | |
| TACCTTGGACAGAGAAATGA+AGG | - | chr8_2:10378782-10378801 | Msa1233590:intron | 40.0% | |
| TTCTGATTCACAGCCATTAG+AGG | - | chr8_2:10378817-10378836 | Msa1233590:intron | 40.0% | |
| AACCTCTTGAAAGCCTCTAA+TGG | + | chr8_2:10378833-10378852 | None:intergenic | 40.0% | |
| TTAGAGGCTTTCAAGAGGTT+TGG | - | chr8_2:10378833-10378852 | Msa1233590:intron | 40.0% | |
| AAGGAAGTTGGCTGAAATTG+AGG | - | chr8_2:10378856-10378875 | Msa1233590:intron | 40.0% | |
| TTGAGGCAAAGCTCATTGAA+AGG | - | chr8_2:10378873-10378892 | Msa1233590:intron | 40.0% | |
| GAGTCATTGAGAAACCGATA+CGG | - | chr8_2:10378905-10378924 | Msa1233590:intron | 40.0% | |
| AGTCATTGAGAAACCGATAC+GGG | - | chr8_2:10378906-10378925 | Msa1233590:intron | 40.0% | |
| AGAGTGTATGGCATATTCAC+AGG | + | chr8_2:10378932-10378951 | None:intergenic | 40.0% | |
| GAAGGATAAAGCAGAGTGTA+TGG | + | chr8_2:10378944-10378963 | None:intergenic | 40.0% | |
| TCTGCTTTATCCTTCAAGTG+AGG | - | chr8_2:10378949-10378968 | Msa1233590:intron | 40.0% | |
| CTTTATCCTTCAAGTGAGGA+AGG | - | chr8_2:10378953-10378972 | Msa1233590:intron | 40.0% | |
| TAAGAGAGGCCAAAAGGTGA+AGG | - | chr8_2:10373937-10373956 | Msa1233590:intron | 45.0% | |
| AAGAGAGGCCAAAAGGTGAA+GGG | - | chr8_2:10373938-10373957 | Msa1233590:intron | 45.0% | |
| TTCGACATCAATGCCATCAG+TGG | - | chr8_2:10373989-10374008 | Msa1233590:intron | 45.0% | |
| AGCGACAAATATACCCACGT+TGG | - | chr8_2:10374215-10374234 | Msa1233590:CDS | 45.0% | |
| GACAAATATACCCACGTTGG+AGG | - | chr8_2:10374218-10374237 | Msa1233590:CDS | 45.0% | |
| !! | AATCATGGTGAGAAGTGCCT+AGG | - | chr8_2:10374267-10374286 | Msa1233590:CDS | 45.0% |
| !! | ATCATGGTGAGAAGTGCCTA+GGG | - | chr8_2:10374268-10374287 | Msa1233590:CDS | 45.0% |
| ! | TCAAAGGGGCGCAAAATGTA+AGG | + | chr8_2:10374828-10374847 | None:intergenic | 45.0% |
| CCAACTGAGTTAAGCTCATG+AGG | + | chr8_2:10375191-10375210 | None:intergenic | 45.0% | |
| CCTCATGAGCTTAACTCAGT+TGG | - | chr8_2:10375188-10375207 | Msa1233590:CDS | 45.0% | |
| !! | TCCATACCAATTTTGGGAGC+AGG | - | chr8_2:10375733-10375752 | Msa1233590:CDS | 45.0% |
| AATAGTGACATGGGAGTTCC+AGG | - | chr8_2:10375787-10375806 | Msa1233590:CDS | 45.0% | |
| AATGGAGCTGGTGTTTCACT+TGG | + | chr8_2:10376184-10376203 | None:intergenic | 45.0% | |
| GGCAGGAAACCAGCTAAAAA+AGG | - | chr8_2:10376391-10376410 | Msa1233590:CDS | 45.0% | |
| CAGATCCTAAAAGTGAGAGC+CGG | - | chr8_2:10376541-10376560 | Msa1233590:CDS | 45.0% | |
| AGATCCTAAAAGTGAGAGCC+GGG | - | chr8_2:10376542-10376561 | Msa1233590:CDS | 45.0% | |
| GAACGTAAACAAAGTCGTCC+CGG | + | chr8_2:10376563-10376582 | None:intergenic | 45.0% | |
| AAGGAACTCTTCCGAACTGA+TGG | - | chr8_2:10376801-10376820 | Msa1233590:intron | 45.0% | |
| ! | CTTCCGAACTGATGGTGAAT+CGG | - | chr8_2:10376809-10376828 | Msa1233590:CDS | 45.0% |
| ! | CCTTGAATCACTTTAGGAGG+TGG | + | chr8_2:10376846-10376865 | None:intergenic | 45.0% |
| CCACCTCCTAAAGTGATTCA+AGG | - | chr8_2:10376843-10376862 | Msa1233590:CDS | 45.0% | |
| GAGCAGTTAATCAGTCTGCA+TGG | - | chr8_2:10376955-10376974 | Msa1233590:CDS | 45.0% | |
| TTTGCAAGGGAGATGATTGC+TGG | - | chr8_2:10376993-10377012 | Msa1233590:CDS | 45.0% | |
| !! | GCATTTAGCTTGCTCTTTGG+TGG | + | chr8_2:10377171-10377190 | None:intergenic | 45.0% |
| ! | ATGTGGGCTACTTAGCTCAA+TGG | + | chr8_2:10377530-10377549 | None:intergenic | 45.0% |
| GTTTACTTGCCTGCAAAGGA+AGG | - | chr8_2:10377583-10377602 | Msa1233590:intron | 45.0% | |
| ! | TTCTATTTGGCTCCTTGCCA+AGG | - | chr8_2:10377615-10377634 | Msa1233590:intron | 45.0% |
| CAATAACATAGGCCTTGGCA+AGG | + | chr8_2:10377630-10377649 | None:intergenic | 45.0% | |
| GAGTGTCTTGGTAAATGCAG+AGG | - | chr8_2:10377904-10377923 | Msa1233590:intron | 45.0% | |
| ! | GATTGGGTTTTCCCAGATCA+AGG | - | chr8_2:10377992-10378011 | Msa1233590:intron | 45.0% |
| CTGGCTATTGTAGAGAATCG+CGG | + | chr8_2:10378143-10378162 | None:intergenic | 45.0% | |
| GCATGCTATATCTAGAGGAG+TGG | - | chr8_2:10378244-10378263 | Msa1233590:intron | 45.0% | |
| AAGGGTAGTCCTCTATCAGA+AGG | + | chr8_2:10378304-10378323 | None:intergenic | 45.0% | |
| !! | TGCTGATGGACTCGAGATAT+GGG | - | chr8_2:10378328-10378347 | Msa1233590:intron | 45.0% |
| TTGGAGAGAAGTTGTAGAGG+TGG | - | chr8_2:10378439-10378458 | Msa1233590:intron | 45.0% | |
| TGGAGAGAAGTTGTAGAGGT+GGG | - | chr8_2:10378440-10378459 | Msa1233590:intron | 45.0% | |
| TTAACCGACCAACTAAGAGC+CGG | - | chr8_2:10378609-10378628 | Msa1233590:intron | 45.0% | |
| CTTTCTTAGGCATGAGTCTC+CGG | + | chr8_2:10378631-10378650 | None:intergenic | 45.0% | |
| GGAGACTCATGCCTAAGAAA+GGG | - | chr8_2:10378630-10378649 | Msa1233590:intron | 45.0% | |
| TACTCAGCAGACCCTTTCTT+AGG | + | chr8_2:10378644-10378663 | None:intergenic | 45.0% | |
| ! | ACTTTCAGAAGGCGTATCTG+AGG | - | chr8_2:10378681-10378700 | Msa1233590:intron | 45.0% |
| GCTTCTGATGAGCAATACCT+TGG | - | chr8_2:10378767-10378786 | Msa1233590:intron | 45.0% | |
| CACCTTCATTTCTCTGTCCA+AGG | + | chr8_2:10378787-10378806 | None:intergenic | 45.0% | |
| TGGACAGAGAAATGAAGGTG+AGG | - | chr8_2:10378787-10378806 | Msa1233590:intron | 45.0% | |
| AGAGAAATGAAGGTGAGGCT+TGG | - | chr8_2:10378792-10378811 | Msa1233590:intron | 45.0% | |
| AGCCATTAGAGGCTTTCAAG+AGG | - | chr8_2:10378828-10378847 | Msa1233590:intron | 45.0% | |
| AGGCTTTCAAGAGGTTTGGA+AGG | - | chr8_2:10378837-10378856 | Msa1233590:intron | 45.0% | |
| CAAGAGGTTTGGAAGGAAGT+TGG | - | chr8_2:10378844-10378863 | Msa1233590:intron | 45.0% | |
| GTCAATCCTTCCTCACTTGA+AGG | + | chr8_2:10378962-10378981 | None:intergenic | 45.0% | |
| !!! | TTAATTTTTTTTTTTTTTTG+TGG | + | chr8_2:10375263-10375282 | None:intergenic | 5.0% |
| !! | GCTTTTAGCTGCACCACTGA+TGG | + | chr8_2:10374005-10374024 | None:intergenic | 50.0% |
| ! | AAGGCTTTTACTAGTGCCGC+CGG | - | chr8_2:10374052-10374071 | Msa1233590:three_prime_UTR | 50.0% |
| ATCAGTGCTACCGCTTCTGA+TGG | - | chr8_2:10374130-10374149 | Msa1233590:three_prime_UTR | 50.0% | |
| ! | AACACCTTTTGCGCTTCCCT+AGG | + | chr8_2:10374287-10374306 | None:intergenic | 50.0% |
| ACACCTAATGTGAGACGGAC+TGG | - | chr8_2:10375608-10375627 | Msa1233590:CDS | 50.0% | |
| ! | CACCTAATGTGAGACGGACT+GGG | - | chr8_2:10375609-10375628 | Msa1233590:CDS | 50.0% |
| !! | ACCTAATGTGAGACGGACTG+GGG | - | chr8_2:10375610-10375629 | Msa1233590:CDS | 50.0% |
| AGGAAGCGGAAAAGGGAAAG+TGG | - | chr8_2:10375678-10375697 | Msa1233590:CDS | 50.0% | |
| GGAAGCGGAAAAGGGAAAGT+GGG | - | chr8_2:10375679-10375698 | Msa1233590:CDS | 50.0% | |
| GCCTGCTCCCAAAATTGGTA+TGG | + | chr8_2:10375737-10375756 | None:intergenic | 50.0% | |
| ACGCATCTTCTTCGCCAACA+AGG | - | chr8_2:10375945-10375964 | Msa1233590:intron | 50.0% | |
| GAGCTGGTGTTTCACTTGGA+AGG | + | chr8_2:10376180-10376199 | None:intergenic | 50.0% | |
| GTCTGCGCAAGGAACATGAT+AGG | - | chr8_2:10376254-10376273 | Msa1233590:intron | 50.0% | |
| GTGATCCTGACAAGTACGCA+AGG | - | chr8_2:10376308-10376327 | Msa1233590:intron | 50.0% | |
| TCCTGACAAGTACGCAAGGT+TGG | - | chr8_2:10376312-10376331 | Msa1233590:intron | 50.0% | |
| GTGTCGGATCCTCCAATAAC+GGG | + | chr8_2:10376343-10376362 | None:intergenic | 50.0% | |
| ! | GGTGTCGGATCCTCCAATAA+CGG | + | chr8_2:10376344-10376363 | None:intergenic | 50.0% |
| AGCTATCAGCCTGAGGATGT+GGG | + | chr8_2:10377546-10377565 | None:intergenic | 50.0% | |
| AAGCTATCAGCCTGAGGATG+TGG | + | chr8_2:10377547-10377566 | None:intergenic | 50.0% | |
| CATCCTCAGGCTGATAGCTT+TGG | - | chr8_2:10377547-10377566 | Msa1233590:intron | 50.0% | |
| GCTTCAACACCTTCCTTTGC+AGG | + | chr8_2:10377595-10377614 | None:intergenic | 50.0% | |
| TTCACCAACTTGTCAGCCAC+TGG | - | chr8_2:10377665-10377684 | Msa1233590:intron | 50.0% | |
| TGTACCAGTGGCTGACAAGT+TGG | + | chr8_2:10377672-10377691 | None:intergenic | 50.0% | |
| !! | TGCACTTGCAAGGAGTGTCT+TGG | - | chr8_2:10377892-10377911 | Msa1233590:intron | 50.0% |
| CGCGATTCTCTACAATAGCC+AGG | - | chr8_2:10378141-10378160 | Msa1233590:intron | 50.0% | |
| ATCTAGAGGAGTGGCTGTTG+AGG | - | chr8_2:10378253-10378272 | Msa1233590:intron | 50.0% | |
| AGTCCTCTATCAGAAGGCGA+AGG | + | chr8_2:10378298-10378317 | None:intergenic | 50.0% | |
| GACTACCCTTATGCTGCTGA+TGG | - | chr8_2:10378314-10378333 | Msa1233590:intron | 50.0% | |
| CGAGTCCATCAGCAGCATAA+GGG | + | chr8_2:10378322-10378341 | None:intergenic | 50.0% | |
| TCGAGTCCATCAGCAGCATA+AGG | + | chr8_2:10378323-10378342 | None:intergenic | 50.0% | |
| !! | CTGCTGATGGACTCGAGATA+TGG | - | chr8_2:10378327-10378346 | Msa1233590:intron | 50.0% |
| GAAGTTGTAGAGGTGGGTCA+TGG | - | chr8_2:10378446-10378465 | Msa1233590:intron | 50.0% | |
| ATGAGTCTCCGGCTCTTAGT+TGG | + | chr8_2:10378620-10378639 | None:intergenic | 50.0% | |
| CGGAGACTCATGCCTAAGAA+AGG | - | chr8_2:10378629-10378648 | Msa1233590:intron | 50.0% | |
| GCATATTCACAGGCCCGTAT+CGG | + | chr8_2:10378922-10378941 | None:intergenic | 50.0% | |
| !! | GAGGAAGGATTGACTTGCAG+AGG | - | chr8_2:10378968-10378987 | Msa1233590:intron | 50.0% |
| ! | CCACTGTGCCCTTCACCTTT+TGG | + | chr8_2:10373949-10373968 | None:intergenic | 55.0% |
| ! | CCAAAAGGTGAAGGGCACAG+TGG | - | chr8_2:10373946-10373965 | Msa1233590:intron | 55.0% |
| ! | GGTGTCAATTATAGCGCCGG+CGG | + | chr8_2:10374071-10374090 | None:intergenic | 55.0% |
| ! | GGCGGTGTCAATTATAGCGC+CGG | + | chr8_2:10374074-10374093 | None:intergenic | 55.0% |
| GGCGCTATAATTGACACCGC+CGG | - | chr8_2:10374073-10374092 | Msa1233590:three_prime_UTR | 55.0% | |
| GCGCTATAATTGACACCGCC+GGG | - | chr8_2:10374074-10374093 | Msa1233590:three_prime_UTR | 55.0% | |
| CGCTATAATTGACACCGCCG+GGG | - | chr8_2:10374075-10374094 | Msa1233590:three_prime_UTR | 55.0% | |
| ! | AGTGCCTAGGGAAGCGCAAA+AGG | - | chr8_2:10374280-10374299 | Msa1233590:CDS | 55.0% |
| !! | GGGAAGCGCAAAAGGTGTTC+TGG | - | chr8_2:10374288-10374307 | Msa1233590:CDS | 55.0% |
| ! | AAGGTCTGGGGTTCAAACCC+CGG | - | chr8_2:10375234-10375253 | Msa1233590:CDS | 55.0% |
| ACCCCAGTCCGTCTCACATT+AGG | + | chr8_2:10375614-10375633 | None:intergenic | 55.0% | |
| !! | GACTGGCCTGCTCCCAAAAT+TGG | + | chr8_2:10375742-10375761 | None:intergenic | 55.0% |
| GCCAACCTTGCGTACTTGTC+AGG | + | chr8_2:10376316-10376335 | None:intergenic | 55.0% | |
| !! | AGGTTGGCTCGTCCCGTTAT+TGG | - | chr8_2:10376328-10376347 | Msa1233590:intron | 55.0% |
| ! | TTGGCTCGTCCCGTTATTGG+AGG | - | chr8_2:10376331-10376350 | Msa1233590:intron | 55.0% |
| TCGAGGGTAAGGCAAGGTGT+CGG | + | chr8_2:10376359-10376378 | None:intergenic | 55.0% | |
| ACACCTTGCCTTACCCTCGA+AGG | - | chr8_2:10376359-10376378 | Msa1233590:CDS | 55.0% | |
| CACCTTGCCTTACCCTCGAA+GGG | - | chr8_2:10376360-10376379 | Msa1233590:CDS | 55.0% | |
| ACCTTGCCTTACCCTCGAAG+GGG | - | chr8_2:10376361-10376380 | Msa1233590:CDS | 55.0% | |
| !! | TCGTCCCGGCTCTCACTTTT+AGG | + | chr8_2:10376549-10376568 | None:intergenic | 55.0% |
| ! | GGGCCGATTCACCATCAGTT+CGG | + | chr8_2:10376815-10376834 | None:intergenic | 55.0% |
| GCTAAGTAGCCCACATCCTC+AGG | - | chr8_2:10377534-10377553 | Msa1233590:intron | 55.0% | |
| GGACCAAAGCTATCAGCCTG+AGG | + | chr8_2:10377553-10377572 | None:intergenic | 55.0% | |
| GAGGATCCAACTTCCCCACA+CGG | - | chr8_2:10378272-10378291 | Msa1233590:intron | 55.0% | |
| GTCTCCGGCTCTTAGTTGGT+CGG | + | chr8_2:10378616-10378635 | None:intergenic | 55.0% | |
| !! | AGCCACAGAAGCGCCAATGG+AGG | + | chr8_2:10374101-10374120 | None:intergenic | 60.0% |
| !! | GAGAGCCACAGAAGCGCCAA+TGG | + | chr8_2:10374104-10374123 | None:intergenic | 60.0% |
| TTGGCGCTTCTGTGGCTCTC+AGG | - | chr8_2:10374104-10374123 | Msa1233590:three_prime_UTR | 60.0% | |
| ACCCACGTTGGAGGAGTAGC+TGG | - | chr8_2:10374227-10374246 | Msa1233590:CDS | 60.0% | |
| GCCAGCTACTCCTCCAACGT+GGG | + | chr8_2:10374231-10374250 | None:intergenic | 60.0% | |
| AGCCAGCTACTCCTCCAACG+TGG | + | chr8_2:10374232-10374251 | None:intergenic | 60.0% | |
| AGATGGAACGGGTCTGCGCA+AGG | - | chr8_2:10376243-10376262 | Msa1233590:intron | 60.0% | |
| CCTTGCCTTACCCTCGAAGG+GGG | - | chr8_2:10376362-10376381 | Msa1233590:CDS | 60.0% | |
| GTTCTCCCCCTTCGAGGGTA+AGG | + | chr8_2:10376370-10376389 | None:intergenic | 60.0% | |
| TACCCTCGAAGGGGGAGAAC+TGG | - | chr8_2:10376370-10376389 | Msa1233590:CDS | 60.0% | |
| TGCCAGTTCTCCCCCTTCGA+GGG | + | chr8_2:10376375-10376394 | None:intergenic | 60.0% | |
| TCAGAAGGCGAAGGCCGTGT+GGG | + | chr8_2:10378289-10378308 | None:intergenic | 60.0% | |
| ATCAGAAGGCGAAGGCCGTG+TGG | + | chr8_2:10378290-10378309 | None:intergenic | 60.0% | |
| CGGCCTTCGCCTTCTGATAG+AGG | - | chr8_2:10378292-10378311 | Msa1233590:intron | 60.0% | |
| !! | AGAAGCGCCAATGGAGGCCC+CGG | + | chr8_2:10374095-10374114 | None:intergenic | 65.0% |
| GGCCTCCATTGGCGCTTCTG+TGG | - | chr8_2:10374096-10374115 | Msa1233590:three_prime_UTR | 65.0% | |
| CCCCCTTCGAGGGTAAGGCA+AGG | + | chr8_2:10376365-10376384 | None:intergenic | 65.0% | |
| CTGCCAGTTCTCCCCCTTCG+AGG | + | chr8_2:10376376-10376395 | None:intergenic | 65.0% | |
| CTCGAAGGGGGAGAACTGGC+AGG | - | chr8_2:10376374-10376393 | Msa1233590:CDS | 65.0% | |
| CGAAGGCCGTGTGGGGAAGT+TGG | + | chr8_2:10378281-10378300 | None:intergenic | 65.0% | |
| CAGAAGGCGAAGGCCGTGTG+GGG | + | chr8_2:10378288-10378307 | None:intergenic | 65.0% | |
| GACACCGCCGGGGCCTCCAT+TGG | - | chr8_2:10374085-10374104 | Msa1233590:three_prime_UTR | 75.0% | |
| AGCGCCAATGGAGGCCCCGG+CGG | + | chr8_2:10374092-10374111 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 10373869 | 10379347 | 10373869 | ID=Msa1233590;Name=Msa1233590 |
| chr8_2 | mRNA | 10373869 | 10379347 | 10373869 | ID=Msa1233590-mRNA-1;Parent=Msa1233590;Name=Msa1233590-mRNA-1;_AED=0.05;_eAED=0.05;_QI=42|1|1|1|0.88|0.8|10|295|869 |
| chr8_2 | exon | 10373869 | 10373954 | 10373869 | ID=Msa1233590-mRNA-1:exon:4055;Parent=Msa1233590-mRNA-1 |
| chr8_2 | exon | 10373992 | 10374957 | 10373992 | ID=Msa1233590-mRNA-1:exon:4054;Parent=Msa1233590-mRNA-1 |
| chr8_2 | exon | 10375178 | 10375441 | 10375178 | ID=Msa1233590-mRNA-1:exon:4053;Parent=Msa1233590-mRNA-1 |
| chr8_2 | exon | 10375530 | 10375837 | 10375530 | ID=Msa1233590-mRNA-1:exon:4052;Parent=Msa1233590-mRNA-1 |
| chr8_2 | exon | 10375950 | 10376054 | 10375950 | ID=Msa1233590-mRNA-1:exon:4051;Parent=Msa1233590-mRNA-1 |
| chr8_2 | exon | 10376170 | 10376255 | 10376170 | ID=Msa1233590-mRNA-1:exon:4050;Parent=Msa1233590-mRNA-1 |
| chr8_2 | exon | 10376352 | 10376672 | 10376352 | ID=Msa1233590-mRNA-1:exon:4049;Parent=Msa1233590-mRNA-1 |
| chr8_2 | exon | 10376804 | 10377044 | 10376804 | ID=Msa1233590-mRNA-1:exon:4048;Parent=Msa1233590-mRNA-1 |
| chr8_2 | exon | 10377250 | 10377536 | 10377250 | ID=Msa1233590-mRNA-1:exon:4047;Parent=Msa1233590-mRNA-1 |
| chr8_2 | exon | 10379065 | 10379347 | 10379065 | ID=Msa1233590-mRNA-1:exon:4046;Parent=Msa1233590-mRNA-1 |
| chr8_2 | five_prime_UTR | 10379306 | 10379347 | 10379306 | ID=Msa1233590-mRNA-1:five_prime_utr;Parent=Msa1233590-mRNA-1 |
| chr8_2 | CDS | 10379065 | 10379305 | 10379065 | ID=Msa1233590-mRNA-1:cds;Parent=Msa1233590-mRNA-1 |
| chr8_2 | CDS | 10377250 | 10377536 | 10377250 | ID=Msa1233590-mRNA-1:cds;Parent=Msa1233590-mRNA-1 |
| chr8_2 | CDS | 10376804 | 10377044 | 10376804 | ID=Msa1233590-mRNA-1:cds;Parent=Msa1233590-mRNA-1 |
| chr8_2 | CDS | 10376352 | 10376672 | 10376352 | ID=Msa1233590-mRNA-1:cds;Parent=Msa1233590-mRNA-1 |
| chr8_2 | CDS | 10376170 | 10376255 | 10376170 | ID=Msa1233590-mRNA-1:cds;Parent=Msa1233590-mRNA-1 |
| chr8_2 | CDS | 10375950 | 10376054 | 10375950 | ID=Msa1233590-mRNA-1:cds;Parent=Msa1233590-mRNA-1 |
| chr8_2 | CDS | 10375530 | 10375837 | 10375530 | ID=Msa1233590-mRNA-1:cds;Parent=Msa1233590-mRNA-1 |
| chr8_2 | CDS | 10375178 | 10375441 | 10375178 | ID=Msa1233590-mRNA-1:cds;Parent=Msa1233590-mRNA-1 |
| chr8_2 | CDS | 10374201 | 10374957 | 10374201 | ID=Msa1233590-mRNA-1:cds;Parent=Msa1233590-mRNA-1 |
| chr8_2 | three_prime_UTR | 10373992 | 10374200 | 10373992 | ID=Msa1233590-mRNA-1:three_prime_utr;Parent=Msa1233590-mRNA-1 |
| chr8_2 | three_prime_UTR | 10373869 | 10373954 | 10373869 | ID=Msa1233590-mRNA-1:three_prime_utr;Parent=Msa1233590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
