Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233780 | XP_013444421.1 | 99.609 | 256 | 1 | 0 | 1 | 256 | 1 | 256 | 0.0 | 532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233780 | sp|Q5XEM9|ALFL5_ARATH | 71.373 | 255 | 68 | 2 | 6 | 256 | 7 | 260 | 1.55e-121 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233780 | A0FK62 | 99.609 | 256 | 1 | 0 | 1 | 256 | 1 | 256 | 0.0 | 532 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1233780 | TF | Alfin-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0827420 | Msa1233780 | 0.816161 | 6.378722e-52 | -8.615850e-47 |
| Msa0172590 | Msa1233780 | 0.808025 | 3.792727e-50 | -8.615850e-47 |
| Msa1233780 | Msa1276090 | 0.989559 | 1.203422e-178 | -8.615850e-47 |
| Msa1233780 | Msa1342070 | 0.861556 | 9.440359e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233780 | MtrunA17_Chr8g0343441 | 99.609 | 256 | 1 | 0 | 1 | 256 | 1 | 256 | 0.0 | 532 |
| Msa1233780 | MtrunA17_Chr2g0329821 | 80.081 | 246 | 48 | 1 | 10 | 255 | 6 | 250 | 7.56e-123 | 350 |
| Msa1233780 | MtrunA17_Chr2g0300241 | 72.441 | 254 | 60 | 3 | 5 | 256 | 8 | 253 | 1.35e-121 | 347 |
| Msa1233780 | MtrunA17_Chr1g0150821 | 74.903 | 259 | 53 | 3 | 7 | 256 | 8 | 263 | 3.07e-121 | 346 |
| Msa1233780 | MtrunA17_Chr4g0076771 | 73.361 | 244 | 64 | 1 | 9 | 252 | 10 | 252 | 1.21e-117 | 337 |
| Msa1233780 | MtrunA17_Chr4g0006381 | 62.651 | 249 | 81 | 6 | 8 | 256 | 6 | 242 | 8.03e-93 | 273 |
| Msa1233780 | MtrunA17_Chr7g0242511 | 60.643 | 249 | 86 | 7 | 8 | 256 | 6 | 242 | 2.15e-90 | 267 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1233780 | AT5G20510.1 | 71.373 | 255 | 68 | 2 | 6 | 256 | 7 | 260 | 1.58e-122 | 349 |
| Msa1233780 | AT3G42790.1 | 73.896 | 249 | 58 | 4 | 7 | 255 | 8 | 249 | 2.05e-121 | 346 |
| Msa1233780 | AT2G02470.1 | 68.340 | 259 | 76 | 4 | 1 | 256 | 1 | 256 | 1.18e-108 | 314 |
| Msa1233780 | AT2G02470.2 | 68.359 | 256 | 72 | 4 | 1 | 256 | 1 | 247 | 2.84e-108 | 313 |
| Msa1233780 | AT1G14510.1 | 68.421 | 247 | 74 | 3 | 9 | 255 | 9 | 251 | 8.64e-108 | 312 |
| Msa1233780 | AT5G26210.1 | 71.483 | 263 | 58 | 3 | 1 | 255 | 1 | 254 | 1.23e-103 | 301 |
| Msa1233780 | AT5G05610.2 | 63.673 | 245 | 76 | 5 | 8 | 252 | 7 | 238 | 2.74e-97 | 285 |
| Msa1233780 | AT5G05610.1 | 63.673 | 245 | 76 | 5 | 8 | 252 | 7 | 238 | 2.74e-97 | 285 |
| Msa1233780 | AT5G20510.2 | 69.585 | 217 | 61 | 2 | 44 | 256 | 4 | 219 | 4.20e-96 | 281 |
| Msa1233780 | AT3G11200.1 | 63.200 | 250 | 82 | 5 | 3 | 252 | 4 | 243 | 1.61e-93 | 275 |
| Msa1233780 | AT5G20510.3 | 74.843 | 159 | 40 | 0 | 6 | 164 | 7 | 165 | 1.16e-81 | 243 |
| Msa1233780 | AT3G11200.2 | 62.212 | 217 | 72 | 5 | 36 | 252 | 24 | 230 | 1.30e-77 | 234 |
| Msa1233780 | AT2G02470.3 | 74.051 | 158 | 40 | 1 | 1 | 158 | 1 | 157 | 5.15e-71 | 218 |
Find 94 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAAAGTGGAAGTGGGTTT+AGG | 0.270720 | 8_2:+10786877 | None:intergenic |
| GTCTGCTTAACCTGAGGTTC+TGG | 0.298478 | 8_2:+10783372 | None:intergenic |
| TGAAAGTGGAAGTGGGTTTA+GGG | 0.303717 | 8_2:+10786878 | None:intergenic |
| TCAATATTTGAAGTTGTTAC+TGG | 0.306554 | 8_2:-10784286 | Msa1233780:CDS |
| TACTACTTTGGTGCCAGATT+TGG | 0.319173 | 8_2:-10784476 | Msa1233780:CDS |
| TGCTTGGCATTAACTTTGCC+AGG | 0.326435 | 8_2:-10784571 | Msa1233780:CDS |
| AGAGAAAGACTGGCTATCTT+TGG | 0.329748 | 8_2:-10784537 | Msa1233780:CDS |
| TGCTTGTTATTGTATCTTCA+AGG | 0.333225 | 8_2:+10783108 | None:intergenic |
| TCCTCCACCTCATCATCTTT+AGG | 0.341682 | 8_2:+10783333 | None:intergenic |
| GTTTCTGTTTGGCACATTGT+AGG | 0.378628 | 8_2:-10783017 | Msa1233780:three_prime_UTR |
| AGATGATGAGGTGGAGGAAC+TGG | 0.383921 | 8_2:-10783328 | Msa1233780:CDS |
| AGCACAGGCTCGGGAAGCTC+TGG | 0.385581 | 8_2:+10784590 | None:intergenic |
| TACCGCTTTCGAGCTGGACT+TGG | 0.388039 | 8_2:+10784204 | None:intergenic |
| ACAACAGCACAGTTCTATAA+TGG | 0.389093 | 8_2:+10782979 | None:intergenic |
| ATTATGGCACTGATGAATTC+TGG | 0.392260 | 8_2:-10783251 | Msa1233780:CDS |
| GTTATTGGATAGTTTCTGTT+TGG | 0.395909 | 8_2:-10783028 | Msa1233780:three_prime_UTR |
| AGATTTGTCGAAGCCAAATC+TGG | 0.397894 | 8_2:+10784463 | None:intergenic |
| GAGAAGAATGAAAGTGGAAG+TGG | 0.405729 | 8_2:+10786870 | None:intergenic |
| GGCATTAACTTTGCCAGGGA+TGG | 0.411593 | 8_2:-10784566 | Msa1233780:CDS |
| GAGCTTCCCGAGCCTGTGCT+TGG | 0.413554 | 8_2:-10784587 | Msa1233780:CDS |
| TTATAGAACTGTGCTGTTGT+TGG | 0.416079 | 8_2:-10782976 | Msa1233780:three_prime_UTR |
| TTGATATGCTCAGCCCTAGC+AGG | 0.419284 | 8_2:+10783174 | None:intergenic |
| TATTTATGAATTGCTGACTT+TGG | 0.425547 | 8_2:-10782887 | Msa1233780:three_prime_UTR |
| TTTCTCTTGCATGCCATCCC+TGG | 0.429424 | 8_2:+10784553 | None:intergenic |
| AAGGAGAACCTGTGCTTGTA+TGG | 0.431624 | 8_2:-10784662 | Msa1233780:CDS |
| TTGCTGTTCACAGTGATTCA+TGG | 0.433165 | 8_2:-10784514 | Msa1233780:CDS |
| GGTGCATGCGGTGAGCATTA+TGG | 0.433315 | 8_2:-10783267 | Msa1233780:CDS |
| GATCATTGATCATGTTGAAC+AGG | 0.434639 | 8_2:+10784314 | None:intergenic |
| GAGAGTGTAGTGGGAGAGAC+AGG | 0.440170 | 8_2:+10786930 | None:intergenic |
| GTTCTATACCCAATGTGATC+CGG | 0.448947 | 8_2:-10785227 | Msa1233780:CDS |
| TGGAAGAGTGAGAGTGTAGT+GGG | 0.451945 | 8_2:+10786921 | None:intergenic |
| ATCGCCATTGCGTACTACTT+TGG | 0.461307 | 8_2:-10784488 | Msa1233780:CDS |
| TTGACTTCCCACTGCTCACT+AGG | 0.465024 | 8_2:+10784635 | None:intergenic |
| ATTATTTACCGCTTTCGAGC+TGG | 0.469549 | 8_2:+10784198 | None:intergenic |
| ATCTGCGAGAAGTGGTTCCA+TGG | 0.475159 | 8_2:-10783216 | Msa1233780:CDS |
| CTCTTGTTGTTGCTGCATGA+TGG | 0.477879 | 8_2:+10783138 | None:intergenic |
| TAACTTACCCGGATCACATT+GGG | 0.487332 | 8_2:+10785219 | None:intergenic |
| GCGTCCATTGTAGCTTCTCC+TGG | 0.487437 | 8_2:+10786838 | None:intergenic |
| CTCACCGCATGCACCACATA+AGG | 0.495356 | 8_2:+10783275 | None:intergenic |
| GTAACAACTTCAAATATTGA+TGG | 0.502359 | 8_2:+10784289 | None:intergenic |
| TTCTATACCCAATGTGATCC+GGG | 0.502678 | 8_2:-10785226 | Msa1233780:intron |
| GCTTGTTATTGTATCTTCAA+GGG | 0.504632 | 8_2:+10783109 | None:intergenic |
| GTTAATGCCAAGCACAGGCT+CGG | 0.508894 | 8_2:+10784580 | None:intergenic |
| GGCTTTGTCTGCTTAACCTG+AGG | 0.513964 | 8_2:+10783366 | None:intergenic |
| CTCTCTAGAAGAGCTTCGCT+TGG | 0.515759 | 8_2:+10786976 | None:intergenic |
| TGATATGCTCAGCCCTAGCA+GGG | 0.516021 | 8_2:+10783175 | None:intergenic |
| GTGTGAAGATCACCCCTGCT+AGG | 0.516439 | 8_2:-10783188 | Msa1233780:CDS |
| GCAGCGGGCTCCAGAACCTC+AGG | 0.519888 | 8_2:-10783382 | Msa1233780:intron |
| TGTTCTGAGAAGAATGAAAG+TGG | 0.519962 | 8_2:+10786864 | None:intergenic |
| TTGAAAGAGAATTTCTGAAG+TGG | 0.524462 | 8_2:+10786901 | None:intergenic |
| CTCATCAAAGCTCTCACCAC+TGG | 0.525319 | 8_2:-10786748 | Msa1233780:intron |
| TTAATGTTATGAGGAAAACT+AGG | 0.525641 | 8_2:-10782847 | Msa1233780:three_prime_UTR |
| ATGGCATGCAAGAGAAAGAC+TGG | 0.534454 | 8_2:-10784547 | Msa1233780:CDS |
| TCTGGCGGAACTTCCTCAGC+AGG | 0.540129 | 8_2:+10784608 | None:intergenic |
| ACAGGCTCGGGAAGCTCTGG+CGG | 0.540889 | 8_2:+10784593 | None:intergenic |
| ACCTAAAGATGATGAGGTGG+AGG | 0.542306 | 8_2:-10783334 | Msa1233780:CDS |
| TTAATGCCAAGCACAGGCTC+GGG | 0.544159 | 8_2:+10784581 | None:intergenic |
| GGTTAAGCAGACAAAGCCAT+TGG | 0.555690 | 8_2:-10783361 | Msa1233780:CDS |
| AAAACTTCCTCAACGGTGCG+TGG | 0.559807 | 8_2:+10786799 | None:intergenic |
| TGAAGATACAATAACAAGCA+AGG | 0.569386 | 8_2:-10783105 | Msa1233780:three_prime_UTR |
| TGACTTCCCACTGCTCACTA+GGG | 0.569521 | 8_2:+10784636 | None:intergenic |
| TGATCTTCACACATTTCCCA+TGG | 0.574011 | 8_2:+10783199 | None:intergenic |
| ATCTCTGAAAACTTCCTCAA+CGG | 0.574665 | 8_2:+10786792 | None:intergenic |
| GTGGAAGAGTGAGAGTGTAG+TGG | 0.575780 | 8_2:+10786920 | None:intergenic |
| TGGCTTCCCTAGTGAGCAGT+GGG | 0.576162 | 8_2:-10784642 | Msa1233780:CDS |
| GGAAGTCAATTTACCTGCTG+AGG | 0.576632 | 8_2:-10784621 | Msa1233780:CDS |
| TGAGGTGGAGGAACTGGACG+AGG | 0.577577 | 8_2:-10783322 | Msa1233780:CDS |
| GCAAAGTTAATGCCAAGCAC+AGG | 0.578595 | 8_2:+10784575 | None:intergenic |
| ATTCTTCTCAGAACAAGACC+AGG | 0.580606 | 8_2:-10786856 | Msa1233780:five_prime_UTR |
| ATCCAAGTCCAGCTCGAAAG+CGG | 0.582695 | 8_2:-10784206 | Msa1233780:intron |
| TAGGGAAGCCATACAAGCAC+AGG | 0.583243 | 8_2:+10784654 | None:intergenic |
| AGAAGAATGAAAGTGGAAGT+GGG | 0.589079 | 8_2:+10786871 | None:intergenic |
| TTGGCTTCGACAAATCTGAC+AGG | 0.592431 | 8_2:-10784457 | Msa1233780:intron |
| TCATCTTTAGGTAACTCCAA+TGG | 0.594683 | 8_2:+10783345 | None:intergenic |
| TGTGAAGATCACCCCTGCTA+GGG | 0.600442 | 8_2:-10783187 | Msa1233780:CDS |
| GCTTGGCATTAACTTTGCCA+GGG | 0.610233 | 8_2:-10784570 | Msa1233780:CDS |
| AAGACCAGGAGAAGCTACAA+TGG | 0.610651 | 8_2:-10786842 | Msa1233780:exon |
| GCTGTGACATCTGCGAGAAG+TGG | 0.611408 | 8_2:-10783224 | Msa1233780:CDS |
| TCTGCGAGAAGTGGTTCCAT+GGG | 0.616851 | 8_2:-10783215 | Msa1233780:CDS |
| GGAGTTACCTAAAGATGATG+AGG | 0.622708 | 8_2:-10783340 | Msa1233780:CDS |
| GTAACTTACCCGGATCACAT+TGG | 0.626802 | 8_2:+10785218 | None:intergenic |
| GTATAATCCACGCACCGTTG+AGG | 0.643429 | 8_2:-10786806 | Msa1233780:CDS |
| ACAGTTTGAACAAACACCAC+AGG | 0.645001 | 8_2:+10782920 | None:intergenic |
| GGCACCAAAGTAGTACGCAA+TGG | 0.648228 | 8_2:+10784484 | None:intergenic |
| ATGGCTTCCCTAGTGAGCAG+TGG | 0.650269 | 8_2:-10784643 | Msa1233780:CDS |
| GAACATGGAGAGACCTTATG+TGG | 0.650525 | 8_2:-10783288 | Msa1233780:CDS |
| ACTTGGATTTGCTGCCACTG+TGG | 0.654768 | 8_2:+10784221 | None:intergenic |
| TGCAGCAAAGAAACAAGTCA+AGG | 0.656590 | 8_2:-10784263 | Msa1233780:CDS |
| GTTACCTAAAGATGATGAGG+TGG | 0.657704 | 8_2:-10783337 | Msa1233780:CDS |
| GCAATTCAGTCGATGACCTG+TGG | 0.660721 | 8_2:-10782936 | Msa1233780:three_prime_UTR |
| GAGGAAGATGAAGATGAACA+TGG | 0.668055 | 8_2:-10783303 | Msa1233780:CDS |
| GATATGCTCAGCCCTAGCAG+GGG | 0.690376 | 8_2:+10783176 | None:intergenic |
| GAGACCTTATGTGGTGCATG+CGG | 0.712511 | 8_2:-10783279 | Msa1233780:CDS |
| TCTTCAGTTTCAAACCACAG+TGG | 0.768394 | 8_2:-10784235 | Msa1233780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAGAACAAAAAAAA+TGG | + | chr8_2:10783140-10783159 | None:intergenic | 10.0% |
| !!! | AAATTTTCAAATTCATTTTT+TGG | - | chr8_2:10783167-10783186 | Msa1233780:CDS | 10.0% |
| !! | ATTTAAATATTTCAAATCAT+AGG | + | chr8_2:10785816-10785835 | None:intergenic | 10.0% |
| !!! | ATATTTAATTTTCAAATTCA+TGG | - | chr8_2:10786253-10786272 | Msa1233780:intron | 10.0% |
| !!! | ACAAAAAAAATGGTTTTTTA+AGG | + | chr8_2:10783130-10783149 | None:intergenic | 15.0% |
| !!! | ATTGTTGTTTATAATATTAG+CGG | - | chr8_2:10783311-10783330 | Msa1233780:CDS | 15.0% |
| !!! | TATTTTTCAAGTTTACTTAA+TGG | - | chr8_2:10783442-10783461 | Msa1233780:intron | 15.0% |
| !!! | ATTTTTCAAGTTTACTTAAT+GGG | - | chr8_2:10783443-10783462 | Msa1233780:intron | 15.0% |
| !!! | TTATATATTTTTTTTACCAC+CGG | - | chr8_2:10783699-10783718 | Msa1233780:intron | 15.0% |
| !! | ATACTTGTTTATGAATATTA+GGG | + | chr8_2:10784742-10784761 | None:intergenic | 15.0% |
| !!! | TATTGATTTTTGTGAAAAAA+TGG | - | chr8_2:10784827-10784846 | Msa1233780:intron | 15.0% |
| !!! | TGTTTTTCAATTTTACTTGA+TGG | - | chr8_2:10783235-10783254 | Msa1233780:CDS | 20.0% |
| !!! | GTTTTTCAATTTTACTTGAT+GGG | - | chr8_2:10783236-10783255 | Msa1233780:CDS | 20.0% |
| !! | TTTAAATTGAGTATTTGAGA+TGG | - | chr8_2:10783555-10783574 | Msa1233780:intron | 20.0% |
| !! | AGTTCAAAAAAAAAATTGCA+AGG | + | chr8_2:10783583-10783602 | None:intergenic | 20.0% |
| !!! | AATTTAGCTAGATTTGAAAT+GGG | - | chr8_2:10783806-10783825 | Msa1233780:intron | 20.0% |
| !!! | TTTTACAAGTGTTTTTAATG+TGG | - | chr8_2:10783842-10783861 | Msa1233780:intron | 20.0% |
| !! | TTGAATTGTGTAATAATTCA+TGG | - | chr8_2:10783919-10783938 | Msa1233780:intron | 20.0% |
| !! | TGAATTGTGTAATAATTCAT+GGG | - | chr8_2:10783920-10783939 | Msa1233780:intron | 20.0% |
| !! | GATACTTGTTTATGAATATT+AGG | + | chr8_2:10784743-10784762 | None:intergenic | 20.0% |
| !! | TTGAATATATATACTGAAGA+AGG | + | chr8_2:10784886-10784905 | None:intergenic | 20.0% |
| !!! | AAACTATATTAGTTTCATCA+AGG | - | chr8_2:10784938-10784957 | Msa1233780:intron | 20.0% |
| !!! | AAGAACTCTTGTTTATATTA+AGG | - | chr8_2:10785733-10785752 | Msa1233780:intron | 20.0% |
| !! | TTATGCAAATATCTAGAAAA+TGG | - | chr8_2:10785838-10785857 | Msa1233780:intron | 20.0% |
| !! | ATGAAAAATATTGTTTGCAA+TGG | - | chr8_2:10786086-10786105 | Msa1233780:intron | 20.0% |
| !! | TTTCAAATTCATGGTTTAAA+TGG | - | chr8_2:10786262-10786281 | Msa1233780:intron | 20.0% |
| !!! | TTTCTCATCTAATTTTTGAA+TGG | - | chr8_2:10786430-10786449 | Msa1233780:intron | 20.0% |
| !!! | TTTCTAGACTTTTAAGTTAT+TGG | - | chr8_2:10786796-10786815 | Msa1233780:CDS | 20.0% |
| !! | GAAGTTTTCAGAGATTTTAA+GGG | - | chr8_2:10783055-10783074 | Msa1233780:three_prime_UTR | 25.0% |
| !! | GTTTTTCTTGAGAATTTCAT+TGG | - | chr8_2:10783399-10783418 | Msa1233780:intron | 25.0% |
| ! | GTGAAAAGTTCAAAATCAAA+AGG | + | chr8_2:10783779-10783798 | None:intergenic | 25.0% |
| ! | CAATTTAGCTAGATTTGAAA+TGG | - | chr8_2:10783805-10783824 | Msa1233780:intron | 25.0% |
| !!! | AGTTTAGTTTGTTGTGAAAT+GGG | - | chr8_2:10783962-10783981 | Msa1233780:intron | 25.0% |
| ! | ATTTGAACTAAAACTACCAT+AGG | - | chr8_2:10783993-10784012 | Msa1233780:intron | 25.0% |
| !!! | ACAACTTAACAAGCTTTTTT+TGG | - | chr8_2:10784159-10784178 | Msa1233780:intron | 25.0% |
| ! | TGTCAAAAAAAAACTACCAA+GGG | + | chr8_2:10784315-10784334 | None:intergenic | 25.0% |
| !! | AGTATCGAAAATGAATTATC+AGG | + | chr8_2:10784450-10784469 | None:intergenic | 25.0% |
| !!! | TAATCAAGTTTTAAACTTGC+TGG | - | chr8_2:10784693-10784712 | Msa1233780:intron | 25.0% |
| ! | ATTCAAATTAATCTTACACG+AGG | - | chr8_2:10784900-10784919 | Msa1233780:intron | 25.0% |
| ! | TTCAAATTAATCTTACACGA+GGG | - | chr8_2:10784901-10784920 | Msa1233780:intron | 25.0% |
| !!! | TCTTTTTTCGGTATTCTATT+TGG | - | chr8_2:10785114-10785133 | Msa1233780:intron | 25.0% |
| ! | GGTTAAGTTATCATATGTAT+CGG | - | chr8_2:10785437-10785456 | Msa1233780:intron | 25.0% |
| ! | GTAACAACTTCAAATATTGA+TGG | + | chr8_2:10785553-10785572 | None:intergenic | 25.0% |
| !! | TCAATATTTGAAGTTGTTAC+TGG | - | chr8_2:10785553-10785572 | Msa1233780:intron | 25.0% |
| ! | TTGCTAGTTAGTTAATTATC+TGG | - | chr8_2:10785781-10785800 | Msa1233780:intron | 25.0% |
| ! | TGCTAGTTAGTTAATTATCT+GGG | - | chr8_2:10785782-10785801 | Msa1233780:intron | 25.0% |
| ! | GTTAAATCTGGTATCATATT+TGG | - | chr8_2:10785909-10785928 | Msa1233780:intron | 25.0% |
| !! | GATTTTCTTCTTCTTGATAA+TGG | - | chr8_2:10785944-10785963 | Msa1233780:intron | 25.0% |
| !! | AAGTTTTCTTTTGAATGCAT+GGG | + | chr8_2:10786059-10786078 | None:intergenic | 25.0% |
| !! | AAAGTTTTCTTTTGAATGCA+TGG | + | chr8_2:10786060-10786079 | None:intergenic | 25.0% |
| ! | TGATTGTGAACAATTTATCA+TGG | - | chr8_2:10786128-10786147 | Msa1233780:intron | 25.0% |
| !!! | TGCAGTTTTTTTTTATTGCT+TGG | - | chr8_2:10786368-10786387 | Msa1233780:intron | 25.0% |
| !!! | GCAGTTTCTTTTTTATTGAT+TGG | - | chr8_2:10786398-10786417 | Msa1233780:intron | 25.0% |
| !!! | TATTTATGAATTGCTGACTT+TGG | - | chr8_2:10786952-10786971 | Msa1233780:five_prime_UTR | 25.0% |
| !! | ATCTTTTCCTTAATGTTATG+AGG | - | chr8_2:10786983-10787002 | Msa1233780:five_prime_UTR | 25.0% |
| !! | TAGTTTTCCTCATAACATTA+AGG | + | chr8_2:10786993-10787012 | None:intergenic | 25.0% |
| ! | TTAATGTTATGAGGAAAACT+AGG | - | chr8_2:10786992-10787011 | Msa1233780:five_prime_UTR | 25.0% |
| ! | TTGAAAGAGAATTTCTGAAG+TGG | + | chr8_2:10782941-10782960 | None:intergenic | 30.0% |
| ! | GGAAGTTTTCAGAGATTTTA+AGG | - | chr8_2:10783054-10783073 | Msa1233780:three_prime_UTR | 30.0% |
| TTGAATGAAATCATGTGTCT+CGG | + | chr8_2:10783679-10783698 | None:intergenic | 30.0% | |
| ACATGAAAATTAACCACATC+AGG | + | chr8_2:10783895-10783914 | None:intergenic | 30.0% | |
| !! | GAGTTTAGTTTGTTGTGAAA+TGG | - | chr8_2:10783961-10783980 | Msa1233780:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr8_2:10784112-10784131 | Msa1233780:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr8_2:10784113-10784132 | Msa1233780:intron | 30.0% |
| !! | TTGTCATAAGCTGTTTTCAT+AGG | + | chr8_2:10784143-10784162 | None:intergenic | 30.0% |
| AGCTGTTTAATAAGCTATGT+TGG | + | chr8_2:10784203-10784222 | None:intergenic | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr8_2:10784289-10784308 | Msa1233780:CDS | 30.0% | |
| CTGTCAAAAAAAAACTACCA+AGG | + | chr8_2:10784316-10784335 | None:intergenic | 30.0% | |
| AAAAGTGAATGTAACTTACC+CGG | + | chr8_2:10784634-10784653 | None:intergenic | 30.0% | |
| CAACGAAAAAAAATACTGCT+AGG | + | chr8_2:10784998-10785017 | None:intergenic | 30.0% | |
| AAGAAAAATCCTGTAGAGAA+CGG | - | chr8_2:10785057-10785076 | Msa1233780:intron | 30.0% | |
| !!! | TTACAGGGCATTTCTTTTTT+CGG | - | chr8_2:10785102-10785121 | Msa1233780:intron | 30.0% |
| TTACTTGATTCTTTCAGAGA+AGG | - | chr8_2:10785158-10785177 | Msa1233780:intron | 30.0% | |
| TTAACCATAAATCTTACCAG+CGG | - | chr8_2:10785416-10785435 | Msa1233780:intron | 30.0% | |
| GCTAGTTAGTTAATTATCTG+GGG | - | chr8_2:10785783-10785802 | Msa1233780:intron | 30.0% | |
| ! | ATGATACCAGATTTAACTTC+TGG | + | chr8_2:10785906-10785925 | None:intergenic | 30.0% |
| AATCTGGTATCATATTTGGA+TGG | - | chr8_2:10785913-10785932 | Msa1233780:intron | 30.0% | |
| !!! | GTTATTTTTGAAGTCTGATG+TGG | - | chr8_2:10786161-10786180 | Msa1233780:intron | 30.0% |
| ! | AAAGTACTCCAAATTTGTGA+AGG | - | chr8_2:10786299-10786318 | Msa1233780:intron | 30.0% |
| ATATACCACCTTCACAAATT+TGG | + | chr8_2:10786310-10786329 | None:intergenic | 30.0% | |
| !! | GCTTGTTATTGTATCTTCAA+GGG | + | chr8_2:10786733-10786752 | None:intergenic | 30.0% |
| !! | TGCTTGTTATTGTATCTTCA+AGG | + | chr8_2:10786734-10786753 | None:intergenic | 30.0% |
| TGAAGATACAATAACAAGCA+AGG | - | chr8_2:10786734-10786753 | Msa1233780:intron | 30.0% | |
| GTTATTGGATAGTTTCTGTT+TGG | - | chr8_2:10786811-10786830 | Msa1233780:CDS | 30.0% | |
| AGAAGAATGAAAGTGGAAGT+GGG | + | chr8_2:10782971-10782990 | None:intergenic | 35.0% | |
| !! | TGTTCTGAGAAGAATGAAAG+TGG | + | chr8_2:10782978-10782997 | None:intergenic | 35.0% |
| ! | ATCTCTGAAAACTTCCTCAA+CGG | + | chr8_2:10783050-10783069 | None:intergenic | 35.0% |
| !! | AGGTTTGTTAGATATACCAG+TGG | + | chr8_2:10783110-10783129 | None:intergenic | 35.0% |
| ! | GGTCAACTGAATTTTCAACT+GGG | - | chr8_2:10783257-10783276 | Msa1233780:CDS | 35.0% |
| ! | AACTGAATTTTCAACTGGGT+TGG | - | chr8_2:10783261-10783280 | Msa1233780:CDS | 35.0% |
| !!! | GGTCAACTGAATTTTCAAGT+GGG | - | chr8_2:10783464-10783483 | Msa1233780:intron | 35.0% |
| ATGAAACAGTGACACATACA+AGG | + | chr8_2:10783746-10783765 | None:intergenic | 35.0% | |
| !! | GTGTTTTTAATGTGGCTGTT+TGG | - | chr8_2:10783850-10783869 | Msa1233780:intron | 35.0% |
| GTAATAATTCATGGGTTCTC+AGG | - | chr8_2:10783928-10783947 | Msa1233780:intron | 35.0% | |
| !! | TAGTTTGTTGTGAAATGGGA+AGG | - | chr8_2:10783966-10783985 | Msa1233780:intron | 35.0% |
| TGAACTAAAACTACCATAGG+TGG | - | chr8_2:10783996-10784015 | Msa1233780:intron | 35.0% | |
| TAGGCAACAACTGACTAAAT+GGG | + | chr8_2:10784052-10784071 | None:intergenic | 35.0% | |
| ATAGGCAACAACTGACTAAA+TGG | + | chr8_2:10784053-10784072 | None:intergenic | 35.0% | |
| GTAGATAAACCAATCCAAAC+AGG | + | chr8_2:10784088-10784107 | None:intergenic | 35.0% | |
| ! | AGTTTTTCTTGCACTTGATG+TGG | - | chr8_2:10784360-10784379 | Msa1233780:intron | 35.0% |
| ACACATCATGTATCAATTGC+AGG | + | chr8_2:10784405-10784424 | None:intergenic | 35.0% | |
| GAACACAACCAAAAAGTTCA+AGG | + | chr8_2:10784502-10784521 | None:intergenic | 35.0% | |
| !! | AGTTACATTCACTTTTCACG+TGG | - | chr8_2:10784638-10784657 | Msa1233780:CDS | 35.0% |
| !!! | CAAGTTTTAAACTTGCTGGA+TGG | - | chr8_2:10784697-10784716 | Msa1233780:intron | 35.0% |
| TTGTGAAAAAATGGCCACTT+TGG | - | chr8_2:10784836-10784855 | Msa1233780:intron | 35.0% | |
| AATGTGAAAACATGTGCTCA+AGG | + | chr8_2:10784863-10784882 | None:intergenic | 35.0% | |
| ! | TGCCATGTTATACTGATTAC+AGG | - | chr8_2:10785086-10785105 | Msa1233780:intron | 35.0% |
| ! | GCCATGTTATACTGATTACA+GGG | - | chr8_2:10785087-10785106 | Msa1233780:intron | 35.0% |
| ! | CTCTGAAAGAATCAAGTAAC+AGG | + | chr8_2:10785157-10785176 | None:intergenic | 35.0% |
| TTAACCGCTGGTAAGATTTA+TGG | + | chr8_2:10785423-10785442 | None:intergenic | 35.0% | |
| ACATATGATAACTTAACCGC+TGG | + | chr8_2:10785435-10785454 | None:intergenic | 35.0% | |
| CAATGAAAGTCATGAGTACA+TGG | + | chr8_2:10785491-10785510 | None:intergenic | 35.0% | |
| GATCATTGATCATGTTGAAC+AGG | + | chr8_2:10785528-10785547 | None:intergenic | 35.0% | |
| TTTCATGTGTACTGTTGTTC+TGG | - | chr8_2:10786194-10786213 | Msa1233780:intron | 35.0% | |
| ! | ATTTTTGAATGGTGAAGCAG+CGG | - | chr8_2:10786441-10786460 | Msa1233780:intron | 35.0% |
| TCATCTTTAGGTAACTCCAA+TGG | + | chr8_2:10786497-10786516 | None:intergenic | 35.0% | |
| !! | ATTATGGCACTGATGAATTC+TGG | - | chr8_2:10786588-10786607 | Msa1233780:intron | 35.0% |
| ACAACAGCACAGTTCTATAA+TGG | + | chr8_2:10786863-10786882 | None:intergenic | 35.0% | |
| ! | TTATAGAACTGTGCTGTTGT+TGG | - | chr8_2:10786863-10786882 | Msa1233780:five_prime_UTR | 35.0% |
| !!! | GTTGTTGGTTTTGTTGTTGT+CGG | - | chr8_2:10786878-10786897 | Msa1233780:five_prime_UTR | 35.0% |
| ! | TGAAAGTGGAAGTGGGTTTA+GGG | + | chr8_2:10782964-10782983 | None:intergenic | 40.0% |
| ! | ATGAAAGTGGAAGTGGGTTT+AGG | + | chr8_2:10782965-10782984 | None:intergenic | 40.0% |
| GAGAAGAATGAAAGTGGAAG+TGG | + | chr8_2:10782972-10782991 | None:intergenic | 40.0% | |
| ATTCTTCTCAGAACAAGACC+AGG | - | chr8_2:10782983-10783002 | Msa1233780:three_prime_UTR | 40.0% | |
| ! | GGGTCAACTGAATTTTCAAC+TGG | - | chr8_2:10783256-10783275 | Msa1233780:CDS | 40.0% |
| !! | GGGTCAACTGAATTTTCAAG+TGG | - | chr8_2:10783463-10783482 | Msa1233780:intron | 40.0% |
| ACACTTTCGATCAGAAGTCT+CGG | + | chr8_2:10783630-10783649 | None:intergenic | 40.0% | |
| CTGATGATTGATACCTGATG+TGG | - | chr8_2:10783879-10783898 | Msa1233780:intron | 40.0% | |
| AATTCATGGGTTCTCAGGAA+TGG | - | chr8_2:10783933-10783952 | Msa1233780:intron | 40.0% | |
| ATTCATGGGTTCTCAGGAAT+GGG | - | chr8_2:10783934-10783953 | Msa1233780:intron | 40.0% | |
| AAAACTACCATAGGTGGATG+TGG | - | chr8_2:10784002-10784021 | Msa1233780:intron | 40.0% | |
| CAATAAACCACATCCACCTA+TGG | + | chr8_2:10784012-10784031 | None:intergenic | 40.0% | |
| CATAGGTGGATGTGGTTTAT+TGG | - | chr8_2:10784010-10784029 | Msa1233780:intron | 40.0% | |
| GTTGTTGCCTATCATCTCTT+AGG | - | chr8_2:10784061-10784080 | Msa1233780:intron | 40.0% | |
| AACAGGTCCTAAGAGATGAT+AGG | + | chr8_2:10784071-10784090 | None:intergenic | 40.0% | |
| ATCATCTCTTAGGACCTGTT+TGG | - | chr8_2:10784071-10784090 | Msa1233780:intron | 40.0% | |
| TTATGCGTAAGCGCTTATCA+TGG | - | chr8_2:10784255-10784274 | Msa1233780:CDS | 40.0% | |
| ! | TTTTCTTGCACTTGATGTGG+AGG | - | chr8_2:10784363-10784382 | Msa1233780:intron | 40.0% |
| TTTCTTGCACTTGATGTGGA+GGG | - | chr8_2:10784364-10784383 | Msa1233780:intron | 40.0% | |
| TGACATTTCGTGCTTCATTG+TGG | - | chr8_2:10784476-10784495 | Msa1233780:CDS | 40.0% | |
| !! | CATTGTGGCCTTGAACTTTT+TGG | - | chr8_2:10784491-10784510 | Msa1233780:CDS | 40.0% |
| !! | CTGATGAAGTATTTTCTGCC+TGG | - | chr8_2:10784565-10784584 | Msa1233780:CDS | 40.0% |
| GTTCTATACCCAATGTGATC+CGG | - | chr8_2:10784612-10784631 | Msa1233780:CDS | 40.0% | |
| TTCTATACCCAATGTGATCC+GGG | - | chr8_2:10784613-10784632 | Msa1233780:CDS | 40.0% | |
| TAACTTACCCGGATCACATT+GGG | + | chr8_2:10784623-10784642 | None:intergenic | 40.0% | |
| AATCCAAAAGACAAATGCCG+TGG | + | chr8_2:10784674-10784693 | None:intergenic | 40.0% | |
| CTGGATGGATGAATGCAATA+GGG | - | chr8_2:10784712-10784731 | Msa1233780:intron | 40.0% | |
| TGGATGGATGAATGCAATAG+GGG | - | chr8_2:10784713-10784732 | Msa1233780:intron | 40.0% | |
| GCCCTGTAATCAGTATAACA+TGG | + | chr8_2:10785091-10785110 | None:intergenic | 40.0% | |
| ! | AGAGAAAGACTGGCTATCTT+TGG | - | chr8_2:10785302-10785321 | Msa1233780:intron | 40.0% |
| ! | TTGCTGTTCACAGTGATTCA+TGG | - | chr8_2:10785325-10785344 | Msa1233780:intron | 40.0% |
| !! | TACTACTTTGGTGCCAGATT+TGG | - | chr8_2:10785363-10785382 | Msa1233780:intron | 40.0% |
| AGATTTGTCGAAGCCAAATC+TGG | + | chr8_2:10785379-10785398 | None:intergenic | 40.0% | |
| CATGACTTTCATTGTGATGC+AGG | - | chr8_2:10785497-10785516 | Msa1233780:intron | 40.0% | |
| TGCAGCAAAGAAACAAGTCA+AGG | - | chr8_2:10785576-10785595 | Msa1233780:intron | 40.0% | |
| TCTTCAGTTTCAAACCACAG+TGG | - | chr8_2:10785604-10785623 | Msa1233780:intron | 40.0% | |
| ATTATTTACCGCTTTCGAGC+TGG | + | chr8_2:10785644-10785663 | None:intergenic | 40.0% | |
| ! | CCAGATTTAACTTCTGGAGA+TGG | + | chr8_2:10785900-10785919 | None:intergenic | 40.0% |
| CCATCTCCAGAAGTTAAATC+TGG | - | chr8_2:10785897-10785916 | Msa1233780:intron | 40.0% | |
| ! | TTCTTTTGAATGCATGGGCA+AGG | + | chr8_2:10786054-10786073 | None:intergenic | 40.0% |
| TTGTTTGCAATGGAAATCCC+TGG | - | chr8_2:10786096-10786115 | Msa1233780:intron | 40.0% | |
| ! | TTGAAGTCTGATGTGGATTG+TGG | - | chr8_2:10786168-10786187 | Msa1233780:intron | 40.0% |
| ! | TGAAGTCTGATGTGGATTGT+GGG | - | chr8_2:10786169-10786188 | Msa1233780:intron | 40.0% |
| ! | TGTTGTTCTGGATGTGATAG+CGG | - | chr8_2:10786206-10786225 | Msa1233780:intron | 40.0% |
| GTACTCCAAATTTGTGAAGG+TGG | - | chr8_2:10786302-10786321 | Msa1233780:intron | 40.0% | |
| ! | TTTTTGAATGGTGAAGCAGC+GGG | - | chr8_2:10786442-10786461 | Msa1233780:intron | 40.0% |
| GGAGTTACCTAAAGATGATG+AGG | - | chr8_2:10786499-10786518 | Msa1233780:intron | 40.0% | |
| GTTACCTAAAGATGATGAGG+TGG | - | chr8_2:10786502-10786521 | Msa1233780:intron | 40.0% | |
| GAGGAAGATGAAGATGAACA+TGG | - | chr8_2:10786536-10786555 | Msa1233780:intron | 40.0% | |
| TGATCTTCACACATTTCCCA+TGG | + | chr8_2:10786643-10786662 | None:intergenic | 40.0% | |
| GTTTCTGTTTGGCACATTGT+AGG | - | chr8_2:10786822-10786841 | Msa1233780:CDS | 40.0% | |
| ACAGTTTGAACAAACACCAC+AGG | + | chr8_2:10786922-10786941 | None:intergenic | 40.0% | |
| ! | TGGAAGAGTGAGAGTGTAGT+GGG | + | chr8_2:10782921-10782940 | None:intergenic | 45.0% |
| AAGACCAGGAGAAGCTACAA+TGG | - | chr8_2:10782997-10783016 | Msa1233780:three_prime_UTR | 45.0% | |
| GAAATCATGTGTCTCGGACA+CGG | + | chr8_2:10783673-10783692 | None:intergenic | 45.0% | |
| CTCTTAGGACCTGTTTGGAT+TGG | - | chr8_2:10784076-10784095 | Msa1233780:intron | 45.0% | |
| TGTTTATCCAAACAGGCCCT+TGG | - | chr8_2:10784296-10784315 | Msa1233780:CDS | 45.0% | |
| AAAACTACCAAGGGCCTGTT+TGG | + | chr8_2:10784306-10784325 | None:intergenic | 45.0% | |
| GTAACTTACCCGGATCACAT+TGG | + | chr8_2:10784624-10784643 | None:intergenic | 45.0% | |
| GCTGGATGGATGAATGCAAT+AGG | - | chr8_2:10784711-10784730 | Msa1233780:intron | 45.0% | |
| GCAAGTAATCCGTTCTCTAC+AGG | + | chr8_2:10785069-10785088 | None:intergenic | 45.0% | |
| AAGGAGAACCTGTGCTTGTA+TGG | - | chr8_2:10785177-10785196 | Msa1233780:intron | 45.0% | |
| GGAAGTCAATTTACCTGCTG+AGG | - | chr8_2:10785218-10785237 | Msa1233780:intron | 45.0% | |
| GCAAAGTTAATGCCAAGCAC+AGG | + | chr8_2:10785267-10785286 | None:intergenic | 45.0% | |
| TGCTTGGCATTAACTTTGCC+AGG | - | chr8_2:10785268-10785287 | Msa1233780:intron | 45.0% | |
| GCTTGGCATTAACTTTGCCA+GGG | - | chr8_2:10785269-10785288 | Msa1233780:intron | 45.0% | |
| ATGGCATGCAAGAGAAAGAC+TGG | - | chr8_2:10785292-10785311 | Msa1233780:intron | 45.0% | |
| ATCGCCATTGCGTACTACTT+TGG | - | chr8_2:10785351-10785370 | Msa1233780:intron | 45.0% | |
| TTGGCTTCGACAAATCTGAC+AGG | - | chr8_2:10785382-10785401 | Msa1233780:intron | 45.0% | |
| TTTGCAATGGAAATCCCTGG+AGG | - | chr8_2:10786099-10786118 | Msa1233780:intron | 45.0% | |
| CACAATCACAATAGCCTCCA+GGG | + | chr8_2:10786116-10786135 | None:intergenic | 45.0% | |
| TCACAATCACAATAGCCTCC+AGG | + | chr8_2:10786117-10786136 | None:intergenic | 45.0% | |
| GGTTAAGCAGACAAAGCCAT+TGG | - | chr8_2:10786478-10786497 | Msa1233780:intron | 45.0% | |
| ACCTAAAGATGATGAGGTGG+AGG | - | chr8_2:10786505-10786524 | Msa1233780:intron | 45.0% | |
| TCCTCCACCTCATCATCTTT+AGG | + | chr8_2:10786509-10786528 | None:intergenic | 45.0% | |
| GAACATGGAGAGACCTTATG+TGG | - | chr8_2:10786551-10786570 | Msa1233780:intron | 45.0% | |
| !! | CTCTTGTTGTTGCTGCATGA+TGG | + | chr8_2:10786704-10786723 | None:intergenic | 45.0% |
| !! | TAAACAAAAATTTATTTAAA+AGG | - | chr8_2:10787020-10787039 | Msa1233780:five_prime_UTR | 5.0% |
| ! | CTCTCTAGAAGAGCTTCGCT+TGG | + | chr8_2:10782866-10782885 | None:intergenic | 50.0% |
| ! | GTGGAAGAGTGAGAGTGTAG+TGG | + | chr8_2:10782922-10782941 | None:intergenic | 50.0% |
| GTATAATCCACGCACCGTTG+AGG | - | chr8_2:10783033-10783052 | Msa1233780:three_prime_UTR | 50.0% | |
| AAAACTTCCTCAACGGTGCG+TGG | + | chr8_2:10783043-10783062 | None:intergenic | 50.0% | |
| !! | GATTTTAAGGGTCGTCGTGC+TGG | - | chr8_2:10783067-10783086 | Msa1233780:three_prime_UTR | 50.0% |
| CTCATCAAAGCTCTCACCAC+TGG | - | chr8_2:10783091-10783110 | Msa1233780:three_prime_UTR | 50.0% | |
| ACCAGAGACAACACGTACAC+CGG | + | chr8_2:10783721-10783740 | None:intergenic | 50.0% | |
| ACATCTGCAACAGCACAACC+AGG | + | chr8_2:10784586-10784605 | None:intergenic | 50.0% | |
| !!! | CACGTGGTAGTTTTGTGCCA+CGG | - | chr8_2:10784654-10784673 | Msa1233780:CDS | 50.0% |
| ! | GTGCCACGGCATTTGTCTTT+TGG | - | chr8_2:10784668-10784687 | Msa1233780:intron | 50.0% |
| CATGTGCTCAAGGACCAAAG+TGG | + | chr8_2:10784853-10784872 | None:intergenic | 50.0% | |
| TAGGGAAGCCATACAAGCAC+AGG | + | chr8_2:10785188-10785207 | None:intergenic | 50.0% | |
| TGACTTCCCACTGCTCACTA+GGG | + | chr8_2:10785206-10785225 | None:intergenic | 50.0% | |
| TTGACTTCCCACTGCTCACT+AGG | + | chr8_2:10785207-10785226 | None:intergenic | 50.0% | |
| TTAATGCCAAGCACAGGCTC+GGG | + | chr8_2:10785261-10785280 | None:intergenic | 50.0% | |
| GTTAATGCCAAGCACAGGCT+CGG | + | chr8_2:10785262-10785281 | None:intergenic | 50.0% | |
| GGCATTAACTTTGCCAGGGA+TGG | - | chr8_2:10785273-10785292 | Msa1233780:intron | 50.0% | |
| TTTCTCTTGCATGCCATCCC+TGG | + | chr8_2:10785289-10785308 | None:intergenic | 50.0% | |
| GGCACCAAAGTAGTACGCAA+TGG | + | chr8_2:10785358-10785377 | None:intergenic | 50.0% | |
| !! | ACTTGGATTTGCTGCCACTG+TGG | + | chr8_2:10785621-10785640 | None:intergenic | 50.0% |
| ATCCAAGTCCAGCTCGAAAG+CGG | - | chr8_2:10785633-10785652 | Msa1233780:intron | 50.0% | |
| GTCTGCTTAACCTGAGGTTC+TGG | + | chr8_2:10786470-10786489 | None:intergenic | 50.0% | |
| ! | GGCTTTGTCTGCTTAACCTG+AGG | + | chr8_2:10786476-10786495 | None:intergenic | 50.0% |
| AGATGATGAGGTGGAGGAAC+TGG | - | chr8_2:10786511-10786530 | Msa1233780:intron | 50.0% | |
| GAGACCTTATGTGGTGCATG+CGG | - | chr8_2:10786560-10786579 | Msa1233780:intron | 50.0% | |
| ATCTGCGAGAAGTGGTTCCA+TGG | - | chr8_2:10786623-10786642 | Msa1233780:intron | 50.0% | |
| TCTGCGAGAAGTGGTTCCAT+GGG | - | chr8_2:10786624-10786643 | Msa1233780:intron | 50.0% | |
| TGTGAAGATCACCCCTGCTA+GGG | - | chr8_2:10786652-10786671 | Msa1233780:intron | 50.0% | |
| TGATATGCTCAGCCCTAGCA+GGG | + | chr8_2:10786667-10786686 | None:intergenic | 50.0% | |
| TTGATATGCTCAGCCCTAGC+AGG | + | chr8_2:10786668-10786687 | None:intergenic | 50.0% | |
| GCAATTCAGTCGATGACCTG+TGG | - | chr8_2:10786903-10786922 | Msa1233780:five_prime_UTR | 50.0% | |
| ! | GAGAGTGTAGTGGGAGAGAC+AGG | + | chr8_2:10782912-10782931 | None:intergenic | 55.0% |
| GCGTCCATTGTAGCTTCTCC+TGG | + | chr8_2:10783004-10783023 | None:intergenic | 55.0% | |
| AGAGACAACACGTACACCGG+TGG | + | chr8_2:10783718-10783737 | None:intergenic | 55.0% | |
| ACCGGTGTACGTGTTGTCTC+TGG | - | chr8_2:10783717-10783736 | Msa1233780:intron | 55.0% | |
| ATGGCTTCCCTAGTGAGCAG+TGG | - | chr8_2:10785196-10785215 | Msa1233780:intron | 55.0% | |
| TGGCTTCCCTAGTGAGCAGT+GGG | - | chr8_2:10785197-10785216 | Msa1233780:intron | 55.0% | |
| TACCGCTTTCGAGCTGGACT+TGG | + | chr8_2:10785638-10785657 | None:intergenic | 55.0% | |
| CTCACCGCATGCACCACATA+AGG | + | chr8_2:10786567-10786586 | None:intergenic | 55.0% | |
| GGTGCATGCGGTGAGCATTA+TGG | - | chr8_2:10786572-10786591 | Msa1233780:intron | 55.0% | |
| GCTGTGACATCTGCGAGAAG+TGG | - | chr8_2:10786615-10786634 | Msa1233780:intron | 55.0% | |
| GTGTGAAGATCACCCCTGCT+AGG | - | chr8_2:10786651-10786670 | Msa1233780:intron | 55.0% | |
| GATATGCTCAGCCCTAGCAG+GGG | + | chr8_2:10786666-10786685 | None:intergenic | 55.0% | |
| TCTCGGACACGGAGACACGT+CGG | + | chr8_2:10783662-10783681 | None:intergenic | 60.0% | |
| TCTGGCGGAACTTCCTCAGC+AGG | + | chr8_2:10785234-10785253 | None:intergenic | 60.0% | |
| TGAGGTGGAGGAACTGGACG+AGG | - | chr8_2:10786517-10786536 | Msa1233780:intron | 60.0% | |
| CACGGAGACACGTCGGACAC+AGG | + | chr8_2:10783655-10783674 | None:intergenic | 65.0% | |
| ! | ACAGGCTCGGGAAGCTCTGG+CGG | + | chr8_2:10785249-10785268 | None:intergenic | 65.0% |
| AGCACAGGCTCGGGAAGCTC+TGG | + | chr8_2:10785252-10785271 | None:intergenic | 65.0% | |
| GAGCTTCCCGAGCCTGTGCT+TGG | - | chr8_2:10785252-10785271 | Msa1233780:intron | 65.0% | |
| ! | GCAGCGGGCTCCAGAACCTC+AGG | - | chr8_2:10786457-10786476 | Msa1233780:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 10782808 | 10787053 | 10782808 | ID=Msa1233780;Name=Msa1233780 |
| chr8_2 | mRNA | 10782808 | 10787053 | 10782808 | ID=Msa1233780-mRNA-1;Parent=Msa1233780;Name=Msa1233780-mRNA-1;_AED=0.02;_eAED=0.02;_QI=208|1|1|1|1|1|5|317|256 |
| chr8_2 | exon | 10782808 | 10783400 | 10782808 | ID=Msa1233780-mRNA-1:exon:4186;Parent=Msa1233780-mRNA-1 |
| chr8_2 | exon | 10784207 | 10784342 | 10784207 | ID=Msa1233780-mRNA-1:exon:4185;Parent=Msa1233780-mRNA-1 |
| chr8_2 | exon | 10784458 | 10784686 | 10784458 | ID=Msa1233780-mRNA-1:exon:4184;Parent=Msa1233780-mRNA-1 |
| chr8_2 | exon | 10785227 | 10785259 | 10785227 | ID=Msa1233780-mRNA-1:exon:4183;Parent=Msa1233780-mRNA-1 |
| chr8_2 | exon | 10786749 | 10787053 | 10786749 | ID=Msa1233780-mRNA-1:exon:4182;Parent=Msa1233780-mRNA-1 |
| chr8_2 | five_prime_UTR | 10786846 | 10787053 | 10786846 | ID=Msa1233780-mRNA-1:five_prime_utr;Parent=Msa1233780-mRNA-1 |
| chr8_2 | CDS | 10786749 | 10786845 | 10786749 | ID=Msa1233780-mRNA-1:cds;Parent=Msa1233780-mRNA-1 |
| chr8_2 | CDS | 10785227 | 10785259 | 10785227 | ID=Msa1233780-mRNA-1:cds;Parent=Msa1233780-mRNA-1 |
| chr8_2 | CDS | 10784458 | 10784686 | 10784458 | ID=Msa1233780-mRNA-1:cds;Parent=Msa1233780-mRNA-1 |
| chr8_2 | CDS | 10784207 | 10784342 | 10784207 | ID=Msa1233780-mRNA-1:cds;Parent=Msa1233780-mRNA-1 |
| chr8_2 | CDS | 10783125 | 10783400 | 10783125 | ID=Msa1233780-mRNA-1:cds;Parent=Msa1233780-mRNA-1 |
| chr8_2 | three_prime_UTR | 10782808 | 10783124 | 10782808 | ID=Msa1233780-mRNA-1:three_prime_utr;Parent=Msa1233780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
