Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276090 | XP_013444421.1 | 99.609 | 256 | 1 | 0 | 1 | 256 | 1 | 256 | 0.0 | 532 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276090 | sp|Q5XEM9|ALFL5_ARATH | 71.373 | 255 | 68 | 2 | 6 | 256 | 7 | 260 | 1.55e-121 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276090 | A0FK62 | 99.609 | 256 | 1 | 0 | 1 | 256 | 1 | 256 | 0.0 | 532 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1276090 | TF | Alfin-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0827420 | Msa1276090 | 0.804820 | 1.797945e-49 | -8.615850e-47 |
| Msa1233780 | Msa1276090 | 0.989559 | 1.203422e-178 | -8.615850e-47 |
| Msa1276090 | Msa1342070 | 0.860908 | 1.487498e-63 | -8.615850e-47 |
| Msa1129580 | Msa1276090 | 0.801178 | 1.017916e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276090 | MtrunA17_Chr8g0343441 | 99.609 | 256 | 1 | 0 | 1 | 256 | 1 | 256 | 0.0 | 532 |
| Msa1276090 | MtrunA17_Chr2g0329821 | 80.081 | 246 | 48 | 1 | 10 | 255 | 6 | 250 | 7.56e-123 | 350 |
| Msa1276090 | MtrunA17_Chr2g0300241 | 72.441 | 254 | 60 | 3 | 5 | 256 | 8 | 253 | 1.35e-121 | 347 |
| Msa1276090 | MtrunA17_Chr1g0150821 | 74.903 | 259 | 53 | 3 | 7 | 256 | 8 | 263 | 3.07e-121 | 346 |
| Msa1276090 | MtrunA17_Chr4g0076771 | 73.361 | 244 | 64 | 1 | 9 | 252 | 10 | 252 | 1.21e-117 | 337 |
| Msa1276090 | MtrunA17_Chr4g0006381 | 62.651 | 249 | 81 | 6 | 8 | 256 | 6 | 242 | 8.03e-93 | 273 |
| Msa1276090 | MtrunA17_Chr7g0242511 | 60.643 | 249 | 86 | 7 | 8 | 256 | 6 | 242 | 2.15e-90 | 267 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276090 | AT5G20510.1 | 71.373 | 255 | 68 | 2 | 6 | 256 | 7 | 260 | 1.58e-122 | 349 |
| Msa1276090 | AT3G42790.1 | 73.896 | 249 | 58 | 4 | 7 | 255 | 8 | 249 | 2.05e-121 | 346 |
| Msa1276090 | AT2G02470.1 | 68.340 | 259 | 76 | 4 | 1 | 256 | 1 | 256 | 1.18e-108 | 314 |
| Msa1276090 | AT2G02470.2 | 68.359 | 256 | 72 | 4 | 1 | 256 | 1 | 247 | 2.84e-108 | 313 |
| Msa1276090 | AT1G14510.1 | 68.421 | 247 | 74 | 3 | 9 | 255 | 9 | 251 | 8.64e-108 | 312 |
| Msa1276090 | AT5G26210.1 | 71.483 | 263 | 58 | 3 | 1 | 255 | 1 | 254 | 1.23e-103 | 301 |
| Msa1276090 | AT5G05610.2 | 63.673 | 245 | 76 | 5 | 8 | 252 | 7 | 238 | 2.74e-97 | 285 |
| Msa1276090 | AT5G05610.1 | 63.673 | 245 | 76 | 5 | 8 | 252 | 7 | 238 | 2.74e-97 | 285 |
| Msa1276090 | AT5G20510.2 | 69.585 | 217 | 61 | 2 | 44 | 256 | 4 | 219 | 4.20e-96 | 281 |
| Msa1276090 | AT3G11200.1 | 63.200 | 250 | 82 | 5 | 3 | 252 | 4 | 243 | 1.61e-93 | 275 |
| Msa1276090 | AT5G20510.3 | 74.843 | 159 | 40 | 0 | 6 | 164 | 7 | 165 | 1.16e-81 | 243 |
| Msa1276090 | AT3G11200.2 | 62.212 | 217 | 72 | 5 | 36 | 252 | 24 | 230 | 1.30e-77 | 234 |
| Msa1276090 | AT2G02470.3 | 74.051 | 158 | 40 | 1 | 1 | 158 | 1 | 157 | 5.15e-71 | 218 |
Find 94 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAAAGTGGAAGTGGGTTT+AGG | 0.270720 | 8_3:+10564383 | None:intergenic |
| GTCTGCTTAACCTGAGGTTC+TGG | 0.298478 | 8_3:+10560878 | None:intergenic |
| TGAAAGTGGAAGTGGGTTTA+GGG | 0.303717 | 8_3:+10564384 | None:intergenic |
| TCAATATTTGAAGTTGTTAC+TGG | 0.306554 | 8_3:-10561792 | Msa1276090:CDS |
| TACTACTTTGGTGCCAGATT+TGG | 0.319173 | 8_3:-10561982 | Msa1276090:CDS |
| TGCTTGGCATTAACTTTGCC+AGG | 0.326435 | 8_3:-10562077 | Msa1276090:CDS |
| AGAGAAAGACTGGCTATCTT+TGG | 0.329748 | 8_3:-10562043 | Msa1276090:CDS |
| TGCTTGTTATTGTATCTTCA+AGG | 0.333225 | 8_3:+10560614 | None:intergenic |
| TCCTCCACCTCATCATCTTT+AGG | 0.341682 | 8_3:+10560839 | None:intergenic |
| GTTTCTGTTTGGCACATTGT+AGG | 0.378628 | 8_3:-10560523 | Msa1276090:three_prime_UTR |
| AGATGATGAGGTGGAGGAAC+TGG | 0.383921 | 8_3:-10560834 | Msa1276090:CDS |
| AGCACAGGCTCGGGAAGCTC+TGG | 0.385581 | 8_3:+10562096 | None:intergenic |
| TACCGCTTTCGAGCTGGACT+TGG | 0.388039 | 8_3:+10561710 | None:intergenic |
| ACAACAGCACAGTTCTATAA+TGG | 0.389093 | 8_3:+10560485 | None:intergenic |
| ATTATGGCACTGATGAATTC+TGG | 0.392260 | 8_3:-10560757 | Msa1276090:CDS |
| GTTATTGGATAGTTTCTGTT+TGG | 0.395909 | 8_3:-10560534 | Msa1276090:three_prime_UTR |
| AGATTTGTCGAAGCCAAATC+TGG | 0.397894 | 8_3:+10561969 | None:intergenic |
| GAGAAGAATGAAAGTGGAAG+TGG | 0.405729 | 8_3:+10564376 | None:intergenic |
| GGCATTAACTTTGCCAGGGA+TGG | 0.411593 | 8_3:-10562072 | Msa1276090:CDS |
| GAGCTTCCCGAGCCTGTGCT+TGG | 0.413554 | 8_3:-10562093 | Msa1276090:CDS |
| TTATAGAACTGTGCTGTTGT+TGG | 0.416079 | 8_3:-10560482 | Msa1276090:three_prime_UTR |
| TTGATATGCTCAGCCCTAGC+AGG | 0.419284 | 8_3:+10560680 | None:intergenic |
| TATTTATGAATTGCTGACTT+TGG | 0.425547 | 8_3:-10560393 | Msa1276090:three_prime_UTR |
| TTTCTCTTGCATGCCATCCC+TGG | 0.429424 | 8_3:+10562059 | None:intergenic |
| AAGGAGAACCTGTGCTTGTA+TGG | 0.431624 | 8_3:-10562168 | Msa1276090:CDS |
| TTGCTGTTCACAGTGATTCA+TGG | 0.433165 | 8_3:-10562020 | Msa1276090:CDS |
| GGTGCATGCGGTGAGCATTA+TGG | 0.433315 | 8_3:-10560773 | Msa1276090:CDS |
| GATCATTGATCATGTTGAAC+AGG | 0.434639 | 8_3:+10561820 | None:intergenic |
| GAGAGTGTAGTGGGAGAGAC+AGG | 0.440170 | 8_3:+10564436 | None:intergenic |
| GTTCTATACCCAATGTGATC+CGG | 0.448947 | 8_3:-10562733 | Msa1276090:CDS |
| TGGAAGAGTGAGAGTGTAGT+GGG | 0.451945 | 8_3:+10564427 | None:intergenic |
| ATCGCCATTGCGTACTACTT+TGG | 0.461307 | 8_3:-10561994 | Msa1276090:CDS |
| TTGACTTCCCACTGCTCACT+AGG | 0.465024 | 8_3:+10562141 | None:intergenic |
| ATTATTTACCGCTTTCGAGC+TGG | 0.469549 | 8_3:+10561704 | None:intergenic |
| ATCTGCGAGAAGTGGTTCCA+TGG | 0.475159 | 8_3:-10560722 | Msa1276090:CDS |
| CTCTTGTTGTTGCTGCATGA+TGG | 0.477879 | 8_3:+10560644 | None:intergenic |
| TAACTTACCCGGATCACATT+GGG | 0.487332 | 8_3:+10562725 | None:intergenic |
| GCGTCCATTGTAGCTTCTCC+TGG | 0.487437 | 8_3:+10564344 | None:intergenic |
| CTCACCGCATGCACCACATA+AGG | 0.495356 | 8_3:+10560781 | None:intergenic |
| GTAACAACTTCAAATATTGA+TGG | 0.502359 | 8_3:+10561795 | None:intergenic |
| TTCTATACCCAATGTGATCC+GGG | 0.502678 | 8_3:-10562732 | Msa1276090:intron |
| GCTTGTTATTGTATCTTCAA+GGG | 0.504632 | 8_3:+10560615 | None:intergenic |
| GTTAATGCCAAGCACAGGCT+CGG | 0.508894 | 8_3:+10562086 | None:intergenic |
| GGCTTTGTCTGCTTAACCTG+AGG | 0.513964 | 8_3:+10560872 | None:intergenic |
| CTCTCTAGAAGAGCTTCGCT+TGG | 0.515759 | 8_3:+10564482 | None:intergenic |
| TGATATGCTCAGCCCTAGCA+GGG | 0.516021 | 8_3:+10560681 | None:intergenic |
| GTGTGAAGATCACCCCTGCT+AGG | 0.516439 | 8_3:-10560694 | Msa1276090:CDS |
| GCAGCGGGCTCCAGAACCTC+AGG | 0.519888 | 8_3:-10560888 | Msa1276090:intron |
| TGTTCTGAGAAGAATGAAAG+TGG | 0.519962 | 8_3:+10564370 | None:intergenic |
| TTGAAAGAGAATTTCTGAAG+TGG | 0.524462 | 8_3:+10564407 | None:intergenic |
| CTCATCAAAGCTCTCACCAC+TGG | 0.525319 | 8_3:-10564254 | Msa1276090:intron |
| TTAATGTTATGAGGAAAACT+AGG | 0.525641 | 8_3:-10560353 | Msa1276090:three_prime_UTR |
| ATGGCATGCAAGAGAAAGAC+TGG | 0.534454 | 8_3:-10562053 | Msa1276090:CDS |
| TCTGGCGGAACTTCCTCAGC+AGG | 0.540129 | 8_3:+10562114 | None:intergenic |
| ACAGGCTCGGGAAGCTCTGG+CGG | 0.540889 | 8_3:+10562099 | None:intergenic |
| ACCTAAAGATGATGAGGTGG+AGG | 0.542306 | 8_3:-10560840 | Msa1276090:CDS |
| TTAATGCCAAGCACAGGCTC+GGG | 0.544159 | 8_3:+10562087 | None:intergenic |
| GGTTAAGCAGACAAAGCCAT+TGG | 0.555690 | 8_3:-10560867 | Msa1276090:CDS |
| AAAACTTCCTCAACGGTGCG+TGG | 0.559807 | 8_3:+10564305 | None:intergenic |
| TGAAGATACAATAACAAGCA+AGG | 0.569386 | 8_3:-10560611 | Msa1276090:three_prime_UTR |
| TGACTTCCCACTGCTCACTA+GGG | 0.569521 | 8_3:+10562142 | None:intergenic |
| TGATCTTCACACATTTCCCA+TGG | 0.574011 | 8_3:+10560705 | None:intergenic |
| ATCTCTGAAAACTTCCTCAA+CGG | 0.574665 | 8_3:+10564298 | None:intergenic |
| GTGGAAGAGTGAGAGTGTAG+TGG | 0.575780 | 8_3:+10564426 | None:intergenic |
| TGGCTTCCCTAGTGAGCAGT+GGG | 0.576162 | 8_3:-10562148 | Msa1276090:CDS |
| GGAAGTCAATTTACCTGCTG+AGG | 0.576632 | 8_3:-10562127 | Msa1276090:CDS |
| TGAGGTGGAGGAACTGGACG+AGG | 0.577577 | 8_3:-10560828 | Msa1276090:CDS |
| GCAAAGTTAATGCCAAGCAC+AGG | 0.578595 | 8_3:+10562081 | None:intergenic |
| ATTCTTCTCAGAACAAGACC+AGG | 0.580606 | 8_3:-10564362 | Msa1276090:five_prime_UTR |
| ATCCAAGTCCAGCTCGAAAG+CGG | 0.582695 | 8_3:-10561712 | Msa1276090:intron |
| TAGGGAAGCCATACAAGCAC+AGG | 0.583243 | 8_3:+10562160 | None:intergenic |
| AGAAGAATGAAAGTGGAAGT+GGG | 0.589079 | 8_3:+10564377 | None:intergenic |
| TTGGCTTCGACAAATCTGAC+AGG | 0.592431 | 8_3:-10561963 | Msa1276090:intron |
| TCATCTTTAGGTAACTCCAA+TGG | 0.594683 | 8_3:+10560851 | None:intergenic |
| TGTGAAGATCACCCCTGCTA+GGG | 0.600442 | 8_3:-10560693 | Msa1276090:CDS |
| GCTTGGCATTAACTTTGCCA+GGG | 0.610233 | 8_3:-10562076 | Msa1276090:CDS |
| AAGACCAGGAGAAGCTACAA+TGG | 0.610651 | 8_3:-10564348 | Msa1276090:exon |
| GCTGTGACATCTGCGAGAAG+TGG | 0.611408 | 8_3:-10560730 | Msa1276090:CDS |
| TCTGCGAGAAGTGGTTCCAT+GGG | 0.616851 | 8_3:-10560721 | Msa1276090:CDS |
| GGAGTTACCTAAAGATGATG+AGG | 0.622708 | 8_3:-10560846 | Msa1276090:CDS |
| GTAACTTACCCGGATCACAT+TGG | 0.626802 | 8_3:+10562724 | None:intergenic |
| GTATAATCCACGCACCGTTG+AGG | 0.643429 | 8_3:-10564312 | Msa1276090:CDS |
| ACAGTTTGAACAAACACCAC+AGG | 0.645001 | 8_3:+10560426 | None:intergenic |
| GGCACCAAAGTAGTACGCAA+TGG | 0.648228 | 8_3:+10561990 | None:intergenic |
| ATGGCTTCCCTAGTGAGCAG+TGG | 0.650269 | 8_3:-10562149 | Msa1276090:CDS |
| GAACATGGAGAGACCTTATG+TGG | 0.650525 | 8_3:-10560794 | Msa1276090:CDS |
| ACTTGGATTTGCTGCCACTG+TGG | 0.654768 | 8_3:+10561727 | None:intergenic |
| TGCAGCAAAGAAACAAGTCA+AGG | 0.656590 | 8_3:-10561769 | Msa1276090:CDS |
| GTTACCTAAAGATGATGAGG+TGG | 0.657704 | 8_3:-10560843 | Msa1276090:CDS |
| GCAATTCAGTCGATGACCTG+TGG | 0.660721 | 8_3:-10560442 | Msa1276090:three_prime_UTR |
| GAGGAAGATGAAGATGAACA+TGG | 0.668055 | 8_3:-10560809 | Msa1276090:CDS |
| GATATGCTCAGCCCTAGCAG+GGG | 0.690376 | 8_3:+10560682 | None:intergenic |
| GAGACCTTATGTGGTGCATG+CGG | 0.712511 | 8_3:-10560785 | Msa1276090:CDS |
| TCTTCAGTTTCAAACCACAG+TGG | 0.768394 | 8_3:-10561741 | Msa1276090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAGAACAAAAAAAA+TGG | + | chr8_3:10560646-10560665 | None:intergenic | 10.0% |
| !!! | AAATTTTCAAATTCATTTTT+TGG | - | chr8_3:10560673-10560692 | Msa1276090:CDS | 10.0% |
| !! | ATTTAAATATTTCAAATCAT+AGG | + | chr8_3:10563322-10563341 | None:intergenic | 10.0% |
| !!! | ATATTTAATTTTCAAATTCA+TGG | - | chr8_3:10563759-10563778 | Msa1276090:intron | 10.0% |
| !!! | ACAAAAAAAATGGTTTTTTA+AGG | + | chr8_3:10560636-10560655 | None:intergenic | 15.0% |
| !!! | ATTGTTGTTTATAATATTAG+CGG | - | chr8_3:10560817-10560836 | Msa1276090:CDS | 15.0% |
| !!! | TATTTTTCAAGTTTACTTAA+TGG | - | chr8_3:10560948-10560967 | Msa1276090:intron | 15.0% |
| !!! | ATTTTTCAAGTTTACTTAAT+GGG | - | chr8_3:10560949-10560968 | Msa1276090:intron | 15.0% |
| !!! | TTATATATTTTTTTTACCAC+CGG | - | chr8_3:10561205-10561224 | Msa1276090:intron | 15.0% |
| !! | ATACTTGTTTATGAATATTA+GGG | + | chr8_3:10562248-10562267 | None:intergenic | 15.0% |
| !!! | TATTGATTTTTGTGAAAAAA+TGG | - | chr8_3:10562333-10562352 | Msa1276090:intron | 15.0% |
| !!! | TGTTTTTCAATTTTACTTGA+TGG | - | chr8_3:10560741-10560760 | Msa1276090:CDS | 20.0% |
| !!! | GTTTTTCAATTTTACTTGAT+GGG | - | chr8_3:10560742-10560761 | Msa1276090:CDS | 20.0% |
| !! | TTTAAATTGAGTATTTGAGA+TGG | - | chr8_3:10561061-10561080 | Msa1276090:intron | 20.0% |
| !! | AGTTCAAAAAAAAAATTGCA+AGG | + | chr8_3:10561089-10561108 | None:intergenic | 20.0% |
| !!! | AATTTAGCTAGATTTGAAAT+GGG | - | chr8_3:10561312-10561331 | Msa1276090:intron | 20.0% |
| !!! | TTTTACAAGTGTTTTTAATG+TGG | - | chr8_3:10561348-10561367 | Msa1276090:intron | 20.0% |
| !! | TTGAATTGTGTAATAATTCA+TGG | - | chr8_3:10561425-10561444 | Msa1276090:intron | 20.0% |
| !! | TGAATTGTGTAATAATTCAT+GGG | - | chr8_3:10561426-10561445 | Msa1276090:intron | 20.0% |
| !! | GATACTTGTTTATGAATATT+AGG | + | chr8_3:10562249-10562268 | None:intergenic | 20.0% |
| !! | TTGAATATATATACTGAAGA+AGG | + | chr8_3:10562392-10562411 | None:intergenic | 20.0% |
| !!! | AAACTATATTAGTTTCATCA+AGG | - | chr8_3:10562444-10562463 | Msa1276090:intron | 20.0% |
| !!! | AAGAACTCTTGTTTATATTA+AGG | - | chr8_3:10563239-10563258 | Msa1276090:intron | 20.0% |
| !! | TTATGCAAATATCTAGAAAA+TGG | - | chr8_3:10563344-10563363 | Msa1276090:intron | 20.0% |
| !! | ATGAAAAATATTGTTTGCAA+TGG | - | chr8_3:10563592-10563611 | Msa1276090:intron | 20.0% |
| !! | TTTCAAATTCATGGTTTAAA+TGG | - | chr8_3:10563768-10563787 | Msa1276090:intron | 20.0% |
| !!! | TTTCTCATCTAATTTTTGAA+TGG | - | chr8_3:10563936-10563955 | Msa1276090:intron | 20.0% |
| !!! | TTTCTAGACTTTTAAGTTAT+TGG | - | chr8_3:10564302-10564321 | Msa1276090:CDS | 20.0% |
| !! | GAAGTTTTCAGAGATTTTAA+GGG | - | chr8_3:10560561-10560580 | Msa1276090:three_prime_UTR | 25.0% |
| !! | GTTTTTCTTGAGAATTTCAT+TGG | - | chr8_3:10560905-10560924 | Msa1276090:intron | 25.0% |
| ! | GTGAAAAGTTCAAAATCAAA+AGG | + | chr8_3:10561285-10561304 | None:intergenic | 25.0% |
| ! | CAATTTAGCTAGATTTGAAA+TGG | - | chr8_3:10561311-10561330 | Msa1276090:intron | 25.0% |
| !!! | AGTTTAGTTTGTTGTGAAAT+GGG | - | chr8_3:10561468-10561487 | Msa1276090:intron | 25.0% |
| ! | ATTTGAACTAAAACTACCAT+AGG | - | chr8_3:10561499-10561518 | Msa1276090:intron | 25.0% |
| !!! | ACAACTTAACAAGCTTTTTT+TGG | - | chr8_3:10561665-10561684 | Msa1276090:intron | 25.0% |
| ! | TGTCAAAAAAAAACTACCAA+GGG | + | chr8_3:10561821-10561840 | None:intergenic | 25.0% |
| !! | AGTATCGAAAATGAATTATC+AGG | + | chr8_3:10561956-10561975 | None:intergenic | 25.0% |
| !!! | TAATCAAGTTTTAAACTTGC+TGG | - | chr8_3:10562199-10562218 | Msa1276090:intron | 25.0% |
| ! | ATTCAAATTAATCTTACACG+AGG | - | chr8_3:10562406-10562425 | Msa1276090:intron | 25.0% |
| ! | TTCAAATTAATCTTACACGA+GGG | - | chr8_3:10562407-10562426 | Msa1276090:intron | 25.0% |
| !!! | TCTTTTTTCGGTATTCTATT+TGG | - | chr8_3:10562620-10562639 | Msa1276090:intron | 25.0% |
| ! | GGTTAAGTTATCATATGTAT+CGG | - | chr8_3:10562943-10562962 | Msa1276090:intron | 25.0% |
| ! | GTAACAACTTCAAATATTGA+TGG | + | chr8_3:10563059-10563078 | None:intergenic | 25.0% |
| !! | TCAATATTTGAAGTTGTTAC+TGG | - | chr8_3:10563059-10563078 | Msa1276090:intron | 25.0% |
| ! | TTGCTAGTTAGTTAATTATC+TGG | - | chr8_3:10563287-10563306 | Msa1276090:intron | 25.0% |
| ! | TGCTAGTTAGTTAATTATCT+GGG | - | chr8_3:10563288-10563307 | Msa1276090:intron | 25.0% |
| ! | GTTAAATCTGGTATCATATT+TGG | - | chr8_3:10563415-10563434 | Msa1276090:intron | 25.0% |
| !! | GATTTTCTTCTTCTTGATAA+TGG | - | chr8_3:10563450-10563469 | Msa1276090:intron | 25.0% |
| !! | AAGTTTTCTTTTGAATGCAT+GGG | + | chr8_3:10563565-10563584 | None:intergenic | 25.0% |
| !! | AAAGTTTTCTTTTGAATGCA+TGG | + | chr8_3:10563566-10563585 | None:intergenic | 25.0% |
| ! | TGATTGTGAACAATTTATCA+TGG | - | chr8_3:10563634-10563653 | Msa1276090:intron | 25.0% |
| !!! | TGCAGTTTTTTTTTATTGCT+TGG | - | chr8_3:10563874-10563893 | Msa1276090:intron | 25.0% |
| !!! | GCAGTTTCTTTTTTATTGAT+TGG | - | chr8_3:10563904-10563923 | Msa1276090:intron | 25.0% |
| !!! | TATTTATGAATTGCTGACTT+TGG | - | chr8_3:10564458-10564477 | Msa1276090:five_prime_UTR | 25.0% |
| !! | ATCTTTTCCTTAATGTTATG+AGG | - | chr8_3:10564489-10564508 | Msa1276090:five_prime_UTR | 25.0% |
| !! | TAGTTTTCCTCATAACATTA+AGG | + | chr8_3:10564499-10564518 | None:intergenic | 25.0% |
| ! | TTAATGTTATGAGGAAAACT+AGG | - | chr8_3:10564498-10564517 | Msa1276090:five_prime_UTR | 25.0% |
| ! | TTGAAAGAGAATTTCTGAAG+TGG | + | chr8_3:10560447-10560466 | None:intergenic | 30.0% |
| ! | GGAAGTTTTCAGAGATTTTA+AGG | - | chr8_3:10560560-10560579 | Msa1276090:three_prime_UTR | 30.0% |
| TTGAATGAAATCATGTGTCT+CGG | + | chr8_3:10561185-10561204 | None:intergenic | 30.0% | |
| ACATGAAAATTAACCACATC+AGG | + | chr8_3:10561401-10561420 | None:intergenic | 30.0% | |
| !! | GAGTTTAGTTTGTTGTGAAA+TGG | - | chr8_3:10561467-10561486 | Msa1276090:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr8_3:10561618-10561637 | Msa1276090:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr8_3:10561619-10561638 | Msa1276090:intron | 30.0% |
| !! | TTGTCATAAGCTGTTTTCAT+AGG | + | chr8_3:10561649-10561668 | None:intergenic | 30.0% |
| AGCTGTTTAATAAGCTATGT+TGG | + | chr8_3:10561709-10561728 | None:intergenic | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr8_3:10561795-10561814 | Msa1276090:CDS | 30.0% | |
| CTGTCAAAAAAAAACTACCA+AGG | + | chr8_3:10561822-10561841 | None:intergenic | 30.0% | |
| AAAAGTGAATGTAACTTACC+CGG | + | chr8_3:10562140-10562159 | None:intergenic | 30.0% | |
| CAACGAAAAAAAATACTGCT+AGG | + | chr8_3:10562504-10562523 | None:intergenic | 30.0% | |
| AAGAAAAATCCTGTAGAGAA+CGG | - | chr8_3:10562563-10562582 | Msa1276090:intron | 30.0% | |
| !!! | TTACAGGGCATTTCTTTTTT+CGG | - | chr8_3:10562608-10562627 | Msa1276090:intron | 30.0% |
| TTACTTGATTCTTTCAGAGA+AGG | - | chr8_3:10562664-10562683 | Msa1276090:intron | 30.0% | |
| TTAACCATAAATCTTACCAG+CGG | - | chr8_3:10562922-10562941 | Msa1276090:intron | 30.0% | |
| GCTAGTTAGTTAATTATCTG+GGG | - | chr8_3:10563289-10563308 | Msa1276090:intron | 30.0% | |
| ! | ATGATACCAGATTTAACTTC+TGG | + | chr8_3:10563412-10563431 | None:intergenic | 30.0% |
| AATCTGGTATCATATTTGGA+TGG | - | chr8_3:10563419-10563438 | Msa1276090:intron | 30.0% | |
| !!! | GTTATTTTTGAAGTCTGATG+TGG | - | chr8_3:10563667-10563686 | Msa1276090:intron | 30.0% |
| ! | AAAGTACTCCAAATTTGTGA+AGG | - | chr8_3:10563805-10563824 | Msa1276090:intron | 30.0% |
| ATATACCACCTTCACAAATT+TGG | + | chr8_3:10563816-10563835 | None:intergenic | 30.0% | |
| !! | GCTTGTTATTGTATCTTCAA+GGG | + | chr8_3:10564239-10564258 | None:intergenic | 30.0% |
| !! | TGCTTGTTATTGTATCTTCA+AGG | + | chr8_3:10564240-10564259 | None:intergenic | 30.0% |
| TGAAGATACAATAACAAGCA+AGG | - | chr8_3:10564240-10564259 | Msa1276090:intron | 30.0% | |
| GTTATTGGATAGTTTCTGTT+TGG | - | chr8_3:10564317-10564336 | Msa1276090:CDS | 30.0% | |
| AGAAGAATGAAAGTGGAAGT+GGG | + | chr8_3:10560477-10560496 | None:intergenic | 35.0% | |
| !! | TGTTCTGAGAAGAATGAAAG+TGG | + | chr8_3:10560484-10560503 | None:intergenic | 35.0% |
| ! | ATCTCTGAAAACTTCCTCAA+CGG | + | chr8_3:10560556-10560575 | None:intergenic | 35.0% |
| !! | AGGTTTGTTAGATATACCAG+TGG | + | chr8_3:10560616-10560635 | None:intergenic | 35.0% |
| ! | GGTCAACTGAATTTTCAACT+GGG | - | chr8_3:10560763-10560782 | Msa1276090:CDS | 35.0% |
| ! | AACTGAATTTTCAACTGGGT+TGG | - | chr8_3:10560767-10560786 | Msa1276090:CDS | 35.0% |
| !!! | GGTCAACTGAATTTTCAAGT+GGG | - | chr8_3:10560970-10560989 | Msa1276090:intron | 35.0% |
| ATGAAACAGTGACACATACA+AGG | + | chr8_3:10561252-10561271 | None:intergenic | 35.0% | |
| !! | GTGTTTTTAATGTGGCTGTT+TGG | - | chr8_3:10561356-10561375 | Msa1276090:intron | 35.0% |
| GTAATAATTCATGGGTTCTC+AGG | - | chr8_3:10561434-10561453 | Msa1276090:intron | 35.0% | |
| !! | TAGTTTGTTGTGAAATGGGA+AGG | - | chr8_3:10561472-10561491 | Msa1276090:intron | 35.0% |
| TGAACTAAAACTACCATAGG+TGG | - | chr8_3:10561502-10561521 | Msa1276090:intron | 35.0% | |
| TAGGCAACAACTGACTAAAT+GGG | + | chr8_3:10561558-10561577 | None:intergenic | 35.0% | |
| ATAGGCAACAACTGACTAAA+TGG | + | chr8_3:10561559-10561578 | None:intergenic | 35.0% | |
| GTAGATAAACCAATCCAAAC+AGG | + | chr8_3:10561594-10561613 | None:intergenic | 35.0% | |
| ! | AGTTTTTCTTGCACTTGATG+TGG | - | chr8_3:10561866-10561885 | Msa1276090:intron | 35.0% |
| ACACATCATGTATCAATTGC+AGG | + | chr8_3:10561911-10561930 | None:intergenic | 35.0% | |
| GAACACAACCAAAAAGTTCA+AGG | + | chr8_3:10562008-10562027 | None:intergenic | 35.0% | |
| !! | AGTTACATTCACTTTTCACG+TGG | - | chr8_3:10562144-10562163 | Msa1276090:CDS | 35.0% |
| !!! | CAAGTTTTAAACTTGCTGGA+TGG | - | chr8_3:10562203-10562222 | Msa1276090:intron | 35.0% |
| TTGTGAAAAAATGGCCACTT+TGG | - | chr8_3:10562342-10562361 | Msa1276090:intron | 35.0% | |
| AATGTGAAAACATGTGCTCA+AGG | + | chr8_3:10562369-10562388 | None:intergenic | 35.0% | |
| ! | TGCCATGTTATACTGATTAC+AGG | - | chr8_3:10562592-10562611 | Msa1276090:intron | 35.0% |
| ! | GCCATGTTATACTGATTACA+GGG | - | chr8_3:10562593-10562612 | Msa1276090:intron | 35.0% |
| ! | CTCTGAAAGAATCAAGTAAC+AGG | + | chr8_3:10562663-10562682 | None:intergenic | 35.0% |
| TTAACCGCTGGTAAGATTTA+TGG | + | chr8_3:10562929-10562948 | None:intergenic | 35.0% | |
| ACATATGATAACTTAACCGC+TGG | + | chr8_3:10562941-10562960 | None:intergenic | 35.0% | |
| CAATGAAAGTCATGAGTACA+TGG | + | chr8_3:10562997-10563016 | None:intergenic | 35.0% | |
| GATCATTGATCATGTTGAAC+AGG | + | chr8_3:10563034-10563053 | None:intergenic | 35.0% | |
| TTTCATGTGTACTGTTGTTC+TGG | - | chr8_3:10563700-10563719 | Msa1276090:intron | 35.0% | |
| ! | ATTTTTGAATGGTGAAGCAG+CGG | - | chr8_3:10563947-10563966 | Msa1276090:intron | 35.0% |
| TCATCTTTAGGTAACTCCAA+TGG | + | chr8_3:10564003-10564022 | None:intergenic | 35.0% | |
| !! | ATTATGGCACTGATGAATTC+TGG | - | chr8_3:10564094-10564113 | Msa1276090:intron | 35.0% |
| ACAACAGCACAGTTCTATAA+TGG | + | chr8_3:10564369-10564388 | None:intergenic | 35.0% | |
| ! | TTATAGAACTGTGCTGTTGT+TGG | - | chr8_3:10564369-10564388 | Msa1276090:five_prime_UTR | 35.0% |
| !!! | GTTGTTGGTTTTGTTGTTGT+CGG | - | chr8_3:10564384-10564403 | Msa1276090:five_prime_UTR | 35.0% |
| ! | TGAAAGTGGAAGTGGGTTTA+GGG | + | chr8_3:10560470-10560489 | None:intergenic | 40.0% |
| ! | ATGAAAGTGGAAGTGGGTTT+AGG | + | chr8_3:10560471-10560490 | None:intergenic | 40.0% |
| GAGAAGAATGAAAGTGGAAG+TGG | + | chr8_3:10560478-10560497 | None:intergenic | 40.0% | |
| ATTCTTCTCAGAACAAGACC+AGG | - | chr8_3:10560489-10560508 | Msa1276090:three_prime_UTR | 40.0% | |
| ! | GGGTCAACTGAATTTTCAAC+TGG | - | chr8_3:10560762-10560781 | Msa1276090:CDS | 40.0% |
| !! | GGGTCAACTGAATTTTCAAG+TGG | - | chr8_3:10560969-10560988 | Msa1276090:intron | 40.0% |
| ACACTTTCGATCAGAAGTCT+CGG | + | chr8_3:10561136-10561155 | None:intergenic | 40.0% | |
| CTGATGATTGATACCTGATG+TGG | - | chr8_3:10561385-10561404 | Msa1276090:intron | 40.0% | |
| AATTCATGGGTTCTCAGGAA+TGG | - | chr8_3:10561439-10561458 | Msa1276090:intron | 40.0% | |
| ATTCATGGGTTCTCAGGAAT+GGG | - | chr8_3:10561440-10561459 | Msa1276090:intron | 40.0% | |
| AAAACTACCATAGGTGGATG+TGG | - | chr8_3:10561508-10561527 | Msa1276090:intron | 40.0% | |
| CAATAAACCACATCCACCTA+TGG | + | chr8_3:10561518-10561537 | None:intergenic | 40.0% | |
| CATAGGTGGATGTGGTTTAT+TGG | - | chr8_3:10561516-10561535 | Msa1276090:intron | 40.0% | |
| GTTGTTGCCTATCATCTCTT+AGG | - | chr8_3:10561567-10561586 | Msa1276090:intron | 40.0% | |
| AACAGGTCCTAAGAGATGAT+AGG | + | chr8_3:10561577-10561596 | None:intergenic | 40.0% | |
| ATCATCTCTTAGGACCTGTT+TGG | - | chr8_3:10561577-10561596 | Msa1276090:intron | 40.0% | |
| TTATGCGTAAGCGCTTATCA+TGG | - | chr8_3:10561761-10561780 | Msa1276090:CDS | 40.0% | |
| ! | TTTTCTTGCACTTGATGTGG+AGG | - | chr8_3:10561869-10561888 | Msa1276090:intron | 40.0% |
| TTTCTTGCACTTGATGTGGA+GGG | - | chr8_3:10561870-10561889 | Msa1276090:intron | 40.0% | |
| TGACATTTCGTGCTTCATTG+TGG | - | chr8_3:10561982-10562001 | Msa1276090:CDS | 40.0% | |
| !! | CATTGTGGCCTTGAACTTTT+TGG | - | chr8_3:10561997-10562016 | Msa1276090:CDS | 40.0% |
| !! | CTGATGAAGTATTTTCTGCC+TGG | - | chr8_3:10562071-10562090 | Msa1276090:CDS | 40.0% |
| GTTCTATACCCAATGTGATC+CGG | - | chr8_3:10562118-10562137 | Msa1276090:CDS | 40.0% | |
| TTCTATACCCAATGTGATCC+GGG | - | chr8_3:10562119-10562138 | Msa1276090:CDS | 40.0% | |
| TAACTTACCCGGATCACATT+GGG | + | chr8_3:10562129-10562148 | None:intergenic | 40.0% | |
| AATCCAAAAGACAAATGCCG+TGG | + | chr8_3:10562180-10562199 | None:intergenic | 40.0% | |
| CTGGATGGATGAATGCAATA+GGG | - | chr8_3:10562218-10562237 | Msa1276090:intron | 40.0% | |
| TGGATGGATGAATGCAATAG+GGG | - | chr8_3:10562219-10562238 | Msa1276090:intron | 40.0% | |
| GCCCTGTAATCAGTATAACA+TGG | + | chr8_3:10562597-10562616 | None:intergenic | 40.0% | |
| ! | AGAGAAAGACTGGCTATCTT+TGG | - | chr8_3:10562808-10562827 | Msa1276090:intron | 40.0% |
| ! | TTGCTGTTCACAGTGATTCA+TGG | - | chr8_3:10562831-10562850 | Msa1276090:intron | 40.0% |
| !! | TACTACTTTGGTGCCAGATT+TGG | - | chr8_3:10562869-10562888 | Msa1276090:intron | 40.0% |
| AGATTTGTCGAAGCCAAATC+TGG | + | chr8_3:10562885-10562904 | None:intergenic | 40.0% | |
| CATGACTTTCATTGTGATGC+AGG | - | chr8_3:10563003-10563022 | Msa1276090:intron | 40.0% | |
| TGCAGCAAAGAAACAAGTCA+AGG | - | chr8_3:10563082-10563101 | Msa1276090:intron | 40.0% | |
| TCTTCAGTTTCAAACCACAG+TGG | - | chr8_3:10563110-10563129 | Msa1276090:intron | 40.0% | |
| ATTATTTACCGCTTTCGAGC+TGG | + | chr8_3:10563150-10563169 | None:intergenic | 40.0% | |
| ! | CCAGATTTAACTTCTGGAGA+TGG | + | chr8_3:10563406-10563425 | None:intergenic | 40.0% |
| CCATCTCCAGAAGTTAAATC+TGG | - | chr8_3:10563403-10563422 | Msa1276090:intron | 40.0% | |
| ! | TTCTTTTGAATGCATGGGCA+AGG | + | chr8_3:10563560-10563579 | None:intergenic | 40.0% |
| TTGTTTGCAATGGAAATCCC+TGG | - | chr8_3:10563602-10563621 | Msa1276090:intron | 40.0% | |
| ! | TTGAAGTCTGATGTGGATTG+TGG | - | chr8_3:10563674-10563693 | Msa1276090:intron | 40.0% |
| ! | TGAAGTCTGATGTGGATTGT+GGG | - | chr8_3:10563675-10563694 | Msa1276090:intron | 40.0% |
| ! | TGTTGTTCTGGATGTGATAG+CGG | - | chr8_3:10563712-10563731 | Msa1276090:intron | 40.0% |
| GTACTCCAAATTTGTGAAGG+TGG | - | chr8_3:10563808-10563827 | Msa1276090:intron | 40.0% | |
| ! | TTTTTGAATGGTGAAGCAGC+GGG | - | chr8_3:10563948-10563967 | Msa1276090:intron | 40.0% |
| GGAGTTACCTAAAGATGATG+AGG | - | chr8_3:10564005-10564024 | Msa1276090:intron | 40.0% | |
| GTTACCTAAAGATGATGAGG+TGG | - | chr8_3:10564008-10564027 | Msa1276090:intron | 40.0% | |
| GAGGAAGATGAAGATGAACA+TGG | - | chr8_3:10564042-10564061 | Msa1276090:intron | 40.0% | |
| TGATCTTCACACATTTCCCA+TGG | + | chr8_3:10564149-10564168 | None:intergenic | 40.0% | |
| GTTTCTGTTTGGCACATTGT+AGG | - | chr8_3:10564328-10564347 | Msa1276090:CDS | 40.0% | |
| ACAGTTTGAACAAACACCAC+AGG | + | chr8_3:10564428-10564447 | None:intergenic | 40.0% | |
| ! | TGGAAGAGTGAGAGTGTAGT+GGG | + | chr8_3:10560427-10560446 | None:intergenic | 45.0% |
| AAGACCAGGAGAAGCTACAA+TGG | - | chr8_3:10560503-10560522 | Msa1276090:three_prime_UTR | 45.0% | |
| GAAATCATGTGTCTCGGACA+CGG | + | chr8_3:10561179-10561198 | None:intergenic | 45.0% | |
| CTCTTAGGACCTGTTTGGAT+TGG | - | chr8_3:10561582-10561601 | Msa1276090:intron | 45.0% | |
| TGTTTATCCAAACAGGCCCT+TGG | - | chr8_3:10561802-10561821 | Msa1276090:CDS | 45.0% | |
| AAAACTACCAAGGGCCTGTT+TGG | + | chr8_3:10561812-10561831 | None:intergenic | 45.0% | |
| GTAACTTACCCGGATCACAT+TGG | + | chr8_3:10562130-10562149 | None:intergenic | 45.0% | |
| GCTGGATGGATGAATGCAAT+AGG | - | chr8_3:10562217-10562236 | Msa1276090:intron | 45.0% | |
| GCAAGTAATCCGTTCTCTAC+AGG | + | chr8_3:10562575-10562594 | None:intergenic | 45.0% | |
| AAGGAGAACCTGTGCTTGTA+TGG | - | chr8_3:10562683-10562702 | Msa1276090:intron | 45.0% | |
| GGAAGTCAATTTACCTGCTG+AGG | - | chr8_3:10562724-10562743 | Msa1276090:intron | 45.0% | |
| GCAAAGTTAATGCCAAGCAC+AGG | + | chr8_3:10562773-10562792 | None:intergenic | 45.0% | |
| TGCTTGGCATTAACTTTGCC+AGG | - | chr8_3:10562774-10562793 | Msa1276090:intron | 45.0% | |
| GCTTGGCATTAACTTTGCCA+GGG | - | chr8_3:10562775-10562794 | Msa1276090:intron | 45.0% | |
| ATGGCATGCAAGAGAAAGAC+TGG | - | chr8_3:10562798-10562817 | Msa1276090:intron | 45.0% | |
| ATCGCCATTGCGTACTACTT+TGG | - | chr8_3:10562857-10562876 | Msa1276090:intron | 45.0% | |
| TTGGCTTCGACAAATCTGAC+AGG | - | chr8_3:10562888-10562907 | Msa1276090:intron | 45.0% | |
| TTTGCAATGGAAATCCCTGG+AGG | - | chr8_3:10563605-10563624 | Msa1276090:intron | 45.0% | |
| CACAATCACAATAGCCTCCA+GGG | + | chr8_3:10563622-10563641 | None:intergenic | 45.0% | |
| TCACAATCACAATAGCCTCC+AGG | + | chr8_3:10563623-10563642 | None:intergenic | 45.0% | |
| GGTTAAGCAGACAAAGCCAT+TGG | - | chr8_3:10563984-10564003 | Msa1276090:intron | 45.0% | |
| ACCTAAAGATGATGAGGTGG+AGG | - | chr8_3:10564011-10564030 | Msa1276090:intron | 45.0% | |
| TCCTCCACCTCATCATCTTT+AGG | + | chr8_3:10564015-10564034 | None:intergenic | 45.0% | |
| GAACATGGAGAGACCTTATG+TGG | - | chr8_3:10564057-10564076 | Msa1276090:intron | 45.0% | |
| !! | CTCTTGTTGTTGCTGCATGA+TGG | + | chr8_3:10564210-10564229 | None:intergenic | 45.0% |
| !! | TAAACAAAAATTTATTTAAA+AGG | - | chr8_3:10564526-10564545 | Msa1276090:five_prime_UTR | 5.0% |
| ! | CTCTCTAGAAGAGCTTCGCT+TGG | + | chr8_3:10560372-10560391 | None:intergenic | 50.0% |
| ! | GTGGAAGAGTGAGAGTGTAG+TGG | + | chr8_3:10560428-10560447 | None:intergenic | 50.0% |
| GTATAATCCACGCACCGTTG+AGG | - | chr8_3:10560539-10560558 | Msa1276090:three_prime_UTR | 50.0% | |
| AAAACTTCCTCAACGGTGCG+TGG | + | chr8_3:10560549-10560568 | None:intergenic | 50.0% | |
| !! | GATTTTAAGGGTCGTCGTGC+TGG | - | chr8_3:10560573-10560592 | Msa1276090:three_prime_UTR | 50.0% |
| CTCATCAAAGCTCTCACCAC+TGG | - | chr8_3:10560597-10560616 | Msa1276090:three_prime_UTR | 50.0% | |
| ACCAGAGACAACACGTACAC+CGG | + | chr8_3:10561227-10561246 | None:intergenic | 50.0% | |
| ACATCTGCAACAGCACAACC+AGG | + | chr8_3:10562092-10562111 | None:intergenic | 50.0% | |
| !!! | CACGTGGTAGTTTTGTGCCA+CGG | - | chr8_3:10562160-10562179 | Msa1276090:CDS | 50.0% |
| ! | GTGCCACGGCATTTGTCTTT+TGG | - | chr8_3:10562174-10562193 | Msa1276090:intron | 50.0% |
| CATGTGCTCAAGGACCAAAG+TGG | + | chr8_3:10562359-10562378 | None:intergenic | 50.0% | |
| TAGGGAAGCCATACAAGCAC+AGG | + | chr8_3:10562694-10562713 | None:intergenic | 50.0% | |
| TGACTTCCCACTGCTCACTA+GGG | + | chr8_3:10562712-10562731 | None:intergenic | 50.0% | |
| TTGACTTCCCACTGCTCACT+AGG | + | chr8_3:10562713-10562732 | None:intergenic | 50.0% | |
| TTAATGCCAAGCACAGGCTC+GGG | + | chr8_3:10562767-10562786 | None:intergenic | 50.0% | |
| GTTAATGCCAAGCACAGGCT+CGG | + | chr8_3:10562768-10562787 | None:intergenic | 50.0% | |
| GGCATTAACTTTGCCAGGGA+TGG | - | chr8_3:10562779-10562798 | Msa1276090:intron | 50.0% | |
| TTTCTCTTGCATGCCATCCC+TGG | + | chr8_3:10562795-10562814 | None:intergenic | 50.0% | |
| GGCACCAAAGTAGTACGCAA+TGG | + | chr8_3:10562864-10562883 | None:intergenic | 50.0% | |
| !! | ACTTGGATTTGCTGCCACTG+TGG | + | chr8_3:10563127-10563146 | None:intergenic | 50.0% |
| ATCCAAGTCCAGCTCGAAAG+CGG | - | chr8_3:10563139-10563158 | Msa1276090:intron | 50.0% | |
| GTCTGCTTAACCTGAGGTTC+TGG | + | chr8_3:10563976-10563995 | None:intergenic | 50.0% | |
| ! | GGCTTTGTCTGCTTAACCTG+AGG | + | chr8_3:10563982-10564001 | None:intergenic | 50.0% |
| AGATGATGAGGTGGAGGAAC+TGG | - | chr8_3:10564017-10564036 | Msa1276090:intron | 50.0% | |
| GAGACCTTATGTGGTGCATG+CGG | - | chr8_3:10564066-10564085 | Msa1276090:intron | 50.0% | |
| ATCTGCGAGAAGTGGTTCCA+TGG | - | chr8_3:10564129-10564148 | Msa1276090:intron | 50.0% | |
| TCTGCGAGAAGTGGTTCCAT+GGG | - | chr8_3:10564130-10564149 | Msa1276090:intron | 50.0% | |
| TGTGAAGATCACCCCTGCTA+GGG | - | chr8_3:10564158-10564177 | Msa1276090:intron | 50.0% | |
| TGATATGCTCAGCCCTAGCA+GGG | + | chr8_3:10564173-10564192 | None:intergenic | 50.0% | |
| TTGATATGCTCAGCCCTAGC+AGG | + | chr8_3:10564174-10564193 | None:intergenic | 50.0% | |
| GCAATTCAGTCGATGACCTG+TGG | - | chr8_3:10564409-10564428 | Msa1276090:five_prime_UTR | 50.0% | |
| ! | GAGAGTGTAGTGGGAGAGAC+AGG | + | chr8_3:10560418-10560437 | None:intergenic | 55.0% |
| GCGTCCATTGTAGCTTCTCC+TGG | + | chr8_3:10560510-10560529 | None:intergenic | 55.0% | |
| AGAGACAACACGTACACCGG+TGG | + | chr8_3:10561224-10561243 | None:intergenic | 55.0% | |
| ACCGGTGTACGTGTTGTCTC+TGG | - | chr8_3:10561223-10561242 | Msa1276090:intron | 55.0% | |
| ATGGCTTCCCTAGTGAGCAG+TGG | - | chr8_3:10562702-10562721 | Msa1276090:intron | 55.0% | |
| TGGCTTCCCTAGTGAGCAGT+GGG | - | chr8_3:10562703-10562722 | Msa1276090:intron | 55.0% | |
| TACCGCTTTCGAGCTGGACT+TGG | + | chr8_3:10563144-10563163 | None:intergenic | 55.0% | |
| CTCACCGCATGCACCACATA+AGG | + | chr8_3:10564073-10564092 | None:intergenic | 55.0% | |
| GGTGCATGCGGTGAGCATTA+TGG | - | chr8_3:10564078-10564097 | Msa1276090:intron | 55.0% | |
| GCTGTGACATCTGCGAGAAG+TGG | - | chr8_3:10564121-10564140 | Msa1276090:intron | 55.0% | |
| GTGTGAAGATCACCCCTGCT+AGG | - | chr8_3:10564157-10564176 | Msa1276090:intron | 55.0% | |
| GATATGCTCAGCCCTAGCAG+GGG | + | chr8_3:10564172-10564191 | None:intergenic | 55.0% | |
| TCTCGGACACGGAGACACGT+CGG | + | chr8_3:10561168-10561187 | None:intergenic | 60.0% | |
| TCTGGCGGAACTTCCTCAGC+AGG | + | chr8_3:10562740-10562759 | None:intergenic | 60.0% | |
| TGAGGTGGAGGAACTGGACG+AGG | - | chr8_3:10564023-10564042 | Msa1276090:intron | 60.0% | |
| CACGGAGACACGTCGGACAC+AGG | + | chr8_3:10561161-10561180 | None:intergenic | 65.0% | |
| ! | ACAGGCTCGGGAAGCTCTGG+CGG | + | chr8_3:10562755-10562774 | None:intergenic | 65.0% |
| AGCACAGGCTCGGGAAGCTC+TGG | + | chr8_3:10562758-10562777 | None:intergenic | 65.0% | |
| GAGCTTCCCGAGCCTGTGCT+TGG | - | chr8_3:10562758-10562777 | Msa1276090:intron | 65.0% | |
| ! | GCAGCGGGCTCCAGAACCTC+AGG | - | chr8_3:10563963-10563982 | Msa1276090:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 10560314 | 10564559 | 10560314 | ID=Msa1276090;Name=Msa1276090 |
| chr8_3 | mRNA | 10560314 | 10564559 | 10560314 | ID=Msa1276090-mRNA-1;Parent=Msa1276090;Name=Msa1276090-mRNA-1;_AED=0.02;_eAED=0.02;_QI=208|1|1|1|1|1|5|317|256 |
| chr8_3 | exon | 10560314 | 10560906 | 10560314 | ID=Msa1276090-mRNA-1:exon:4363;Parent=Msa1276090-mRNA-1 |
| chr8_3 | exon | 10561713 | 10561848 | 10561713 | ID=Msa1276090-mRNA-1:exon:4362;Parent=Msa1276090-mRNA-1 |
| chr8_3 | exon | 10561964 | 10562192 | 10561964 | ID=Msa1276090-mRNA-1:exon:4361;Parent=Msa1276090-mRNA-1 |
| chr8_3 | exon | 10562733 | 10562765 | 10562733 | ID=Msa1276090-mRNA-1:exon:4360;Parent=Msa1276090-mRNA-1 |
| chr8_3 | exon | 10564255 | 10564559 | 10564255 | ID=Msa1276090-mRNA-1:exon:4359;Parent=Msa1276090-mRNA-1 |
| chr8_3 | five_prime_UTR | 10564352 | 10564559 | 10564352 | ID=Msa1276090-mRNA-1:five_prime_utr;Parent=Msa1276090-mRNA-1 |
| chr8_3 | CDS | 10564255 | 10564351 | 10564255 | ID=Msa1276090-mRNA-1:cds;Parent=Msa1276090-mRNA-1 |
| chr8_3 | CDS | 10562733 | 10562765 | 10562733 | ID=Msa1276090-mRNA-1:cds;Parent=Msa1276090-mRNA-1 |
| chr8_3 | CDS | 10561964 | 10562192 | 10561964 | ID=Msa1276090-mRNA-1:cds;Parent=Msa1276090-mRNA-1 |
| chr8_3 | CDS | 10561713 | 10561848 | 10561713 | ID=Msa1276090-mRNA-1:cds;Parent=Msa1276090-mRNA-1 |
| chr8_3 | CDS | 10560631 | 10560906 | 10560631 | ID=Msa1276090-mRNA-1:cds;Parent=Msa1276090-mRNA-1 |
| chr8_3 | three_prime_UTR | 10560314 | 10560630 | 10560314 | ID=Msa1276090-mRNA-1:three_prime_utr;Parent=Msa1276090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
