AlfalfaGEDB | Msa0172590

M. sativa cultivar zhongmu-4 / Msa0172590

KEGG: -
GO: GO:0003002 GO:0003674 GO:0003712 GO:0003713 GO:0007275 GO:0007389 GO:0008150 GO:0008283 GO:0009889 GO:0009891 GO:0009893 GO:0009955 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0045935 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2001141
PFAM: PF05030.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0172590	XP_003590996.1	97.653	213	3	2	1	213	1	211	6.11e-142	405

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0172590	sp\|Q8L8A5\|GIF1_ARATH	58.798	233	53	8	1	213	1	210	1.55e-54	176

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0172590	G7I6V2	97.653	213	3	2	1	213	1	211	2.92e-142	405

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0032180	Msa0172590	0.880508	5.183578e-70	-8.615850e-47
Msa0044520	Msa0172590	0.801703	7.943752e-49	-8.615850e-47
Msa0050530	Msa0172590	0.814514	1.482251e-51	-8.615850e-47
Msa0079410	Msa0172590	0.884571	1.711846e-71	-8.615850e-47
Msa0100600	Msa0172590	0.833714	4.549590e-56	-8.615850e-47
Msa0100890	Msa0172590	0.810263	1.257164e-50	-8.615850e-47
Msa0125590	Msa0172590	0.807963	3.909139e-50	-8.615850e-47
Msa0156050	Msa0172590	0.801540	8.579031e-49	-8.615850e-47
Msa0156090	Msa0172590	0.804159	2.468829e-49	-8.615850e-47
Msa0168380	Msa0172590	0.802401	5.709005e-49	-8.615850e-47
Msa0170070	Msa0172590	0.812063	5.119926e-51	-8.615850e-47
Msa0172590	Msa0195440	0.810956	8.907185e-51	-8.615850e-47
Msa0172590	Msa0204970	0.815073	1.114179e-51	-8.615850e-47
Msa0172590	Msa0218020	0.820344	7.207874e-53	-8.615850e-47
Msa0172590	Msa0221180	0.812752	3.619232e-51	-8.615850e-47
Msa0172590	Msa0225800	0.801927	7.147770e-49	-8.615850e-47
Msa0172590	Msa0237240	0.800632	1.316064e-48	-8.615850e-47
Msa0172590	Msa0249870	0.809779	1.598417e-50	-8.615850e-47
Msa0172590	Msa0262750	0.813547	2.422400e-51	-8.615850e-47
Msa0172590	Msa0281540	0.831615	1.509612e-55	-8.615850e-47
Msa0172590	Msa0288400	0.801604	8.327281e-49	-8.615850e-47
Msa0172590	Msa0300470	0.804049	2.602682e-49	-8.615850e-47
Msa0172590	Msa0312740	0.802986	4.323585e-49	-8.615850e-47
Msa0172590	Msa0320580	0.822935	1.814874e-53	-8.615850e-47
Msa0172590	Msa0337970	0.807431	5.070729e-50	-8.615850e-47
Msa0172590	Msa0342220	0.815496	8.971953e-52	-8.615850e-47
Msa0172590	Msa0344110	0.829915	3.939322e-55	-8.615850e-47
Msa0172590	Msa0364680	0.840307	9.407324e-58	-8.615850e-47
Msa0172590	Msa0373170	0.837804	4.188147e-57	-8.615850e-47
Msa0172590	Msa0388250	0.835953	1.242745e-56	-8.615850e-47
Msa0172590	Msa0404770	0.824449	8.024652e-54	-8.615850e-47
Msa0172590	Msa0416210	0.816254	6.080704e-52	-8.615850e-47
Msa0172590	Msa0421750	0.822454	2.348191e-53	-8.615850e-47
Msa0172590	Msa0430080	0.809850	1.542970e-50	-8.615850e-47
Msa0172590	Msa0430170	0.808855	2.522556e-50	-8.615850e-47
Msa0172590	Msa0433630	0.828916	6.889662e-55	-8.615850e-47
Msa0172590	Msa0467690	0.838210	3.293346e-57	-8.615850e-47
Msa0172590	Msa0500450	0.800992	1.110895e-48	-8.615850e-47
Msa0172590	Msa0506880	0.805855	1.091150e-49	-8.615850e-47
Msa0172590	Msa0507810	0.805990	1.022272e-49	-8.615850e-47
Msa0172590	Msa0507820	0.806915	6.521716e-50	-8.615850e-47
Msa0172590	Msa0507920	0.806853	6.724347e-50	-8.615850e-47
Msa0172590	Msa0514020	0.828501	8.680294e-55	-8.615850e-47
Msa0172590	Msa0520260	0.800486	1.409440e-48	-8.615850e-47
Msa0172590	Msa0521510	0.838775	2.354135e-57	-8.615850e-47
Msa0172590	Msa0521530	0.815136	1.078844e-51	-8.615850e-47
Msa0172590	Msa0527850	0.816067	6.692463e-52	-8.615850e-47
Msa0172590	Msa0537990	0.827129	1.855317e-54	-8.615850e-47
Msa0172590	Msa0541880	0.820188	7.825582e-53	-8.615850e-47
Msa0172590	Msa0544410	0.811402	7.127336e-51	-8.615850e-47
Msa0172590	Msa0554300	0.801199	1.007800e-48	-8.615850e-47
Msa0172590	Msa0561560	0.816083	6.640348e-52	-8.615850e-47
Msa0172590	Msa0571350	0.826582	2.506361e-54	-8.615850e-47
Msa0172590	Msa0572830	0.845107	4.989814e-59	-8.615850e-47
Msa0172590	Msa0574660	0.826506	2.613936e-54	-8.615850e-47
Msa0172590	Msa0575710	0.818118	2.315669e-52	-8.615850e-47
Msa0172590	Msa0576330	0.815132	1.081278e-51	-8.615850e-47
Msa0172590	Msa0580940	0.805460	1.320612e-49	-8.615850e-47
Msa0172590	Msa0580990	0.801581	8.416985e-49	-8.615850e-47
Msa0172590	Msa0582460	0.808642	2.801228e-50	-8.615850e-47
Msa0172590	Msa0585340	0.802311	5.958333e-49	-8.615850e-47
Msa0172590	Msa0586200	0.800341	1.508555e-48	-8.615850e-47
Msa0172590	Msa0605520	0.814373	1.592125e-51	-8.615850e-47
Msa0172590	Msa0615630	0.805274	1.444664e-49	-8.615850e-47
Msa0172590	Msa0620500	0.810129	1.343533e-50	-8.615850e-47
Msa0172590	Msa0625340	0.828903	6.938787e-55	-8.615850e-47
Msa0172590	Msa0640800	0.817820	2.704808e-52	-8.615850e-47
Msa0172590	Msa0646260	0.808778	2.619839e-50	-8.615850e-47
Msa0172590	Msa0647440	0.803953	2.725806e-49	-8.615850e-47
Msa0172590	Msa0654740	0.815855	7.463071e-52	-8.615850e-47
Msa0172590	Msa0660260	0.816917	4.318586e-52	-8.615850e-47
Msa0172590	Msa0685610	0.803860	2.850025e-49	-8.615850e-47
Msa0172590	Msa0688380	0.807199	5.678690e-50	-8.615850e-47
Msa0172590	Msa0688620	0.827623	1.412604e-54	-8.615850e-47
Msa0172590	Msa0690570	0.812950	3.275683e-51	-8.615850e-47
Msa0172590	Msa0707260	0.841701	4.050998e-58	-8.615850e-47
Msa0172590	Msa0720280	0.842075	3.226548e-58	-8.615850e-47
Msa0172590	Msa0737130	0.802422	5.652006e-49	-8.615850e-47
Msa0172590	Msa0749190	0.827800	1.280659e-54	-8.615850e-47
Msa0172590	Msa0750520	0.825344	4.932674e-54	-8.615850e-47
Msa0172590	Msa0751720	0.860039	2.727358e-63	-8.615850e-47
Msa0172590	Msa0752230	0.807590	4.693588e-50	-8.615850e-47
Msa0172590	Msa0774060	0.821176	4.640127e-53	-8.615850e-47
Msa0172590	Msa0778600	0.805768	1.137896e-49	-8.615850e-47
Msa0172590	Msa0780820	0.843218	1.604116e-58	-8.615850e-47
Msa0172590	Msa0798080	0.820023	8.535828e-53	-8.615850e-47
Msa0172590	Msa0803140	0.832841	7.510504e-56	-8.615850e-47
Msa0172590	Msa0816080	0.805979	1.027854e-49	-8.615850e-47
Msa0172590	Msa0816230	0.835615	1.513765e-56	-8.615850e-47
Msa0172590	Msa0821350	0.803498	3.387141e-49	-8.615850e-47
Msa0172590	Msa0822510	0.815819	7.602188e-52	-8.615850e-47
Msa0172590	Msa0827420	0.981713	2.906452e-153	-8.615850e-47
Msa0172590	Msa0831820	0.823137	1.628468e-53	-8.615850e-47
Msa0172590	Msa0836330	0.805953	1.040448e-49	-8.615850e-47
Msa0172590	Msa0837680	0.804387	2.213749e-49	-8.615850e-47
Msa0172590	Msa0841500	0.814745	1.317713e-51	-8.615850e-47
Msa0172590	Msa0861440	0.808919	2.444805e-50	-8.615850e-47
Msa0172590	Msa0866530	0.800284	1.548901e-48	-8.615850e-47
Msa0172590	Msa0876630	0.808176	3.522108e-50	-8.615850e-47
Msa0172590	Msa0900090	0.806623	7.519413e-50	-8.615850e-47
Msa0172590	Msa0901150	0.839526	1.503206e-57	-8.615850e-47
Msa0172590	Msa0909760	0.818870	1.563814e-52	-8.615850e-47
Msa0172590	Msa0926080	0.839336	1.683914e-57	-8.615850e-47
Msa0172590	Msa0966710	0.847542	1.082517e-59	-8.615850e-47
Msa0172590	Msa0970040	0.804155	2.474727e-49	-8.615850e-47
Msa0172590	Msa1000970	0.848231	6.990538e-60	-8.615850e-47
Msa0172590	Msa1008670	0.807863	4.105781e-50	-8.615850e-47
Msa0172590	Msa1008850	0.802726	4.893239e-49	-8.615850e-47
Msa0172590	Msa1027160	0.819273	1.266614e-52	-8.615850e-47
Msa0172590	Msa1038860	0.800709	1.269109e-48	-8.615850e-47
Msa0172590	Msa1071410	0.826395	2.777429e-54	-8.615850e-47
Msa0172590	Msa1076020	0.814504	1.489348e-51	-8.615850e-47
Msa0172590	Msa1078880	0.800883	1.169178e-48	-8.615850e-47
Msa0172590	Msa1085680	0.811386	7.185613e-51	-8.615850e-47
Msa0172590	Msa1144990	0.827474	1.533666e-54	-8.615850e-47
Msa0172590	Msa1154630	0.832924	7.161393e-56	-8.615850e-47
Msa0172590	Msa1163180	0.810321	1.221441e-50	-8.615850e-47
Msa0172590	Msa1169190	0.808956	2.400507e-50	-8.615850e-47
Msa0172590	Msa1206040	0.802691	4.974916e-49	-8.615850e-47
Msa0172590	Msa1212700	0.818126	2.305902e-52	-8.615850e-47
Msa0172590	Msa1212920	0.828122	1.071590e-54	-8.615850e-47
Msa0172590	Msa1215980	0.811820	5.782240e-51	-8.615850e-47
Msa0172590	Msa1233780	0.808025	3.792727e-50	-8.615850e-47
Msa0172590	Msa1277110	0.815644	8.318207e-52	-8.615850e-47
Msa0172590	Msa1294790	0.801996	6.916464e-49	-8.615850e-47
Msa0172590	Msa1297070	0.805667	1.195208e-49	-8.615850e-47
Msa0172590	Msa1308850	0.811137	8.138544e-51	-8.615850e-47
Msa0172590	Msa1308860	0.806563	7.739481e-50	-8.615850e-47
Msa0172590	Msa1315500	0.804820	1.798212e-49	-8.615850e-47
Msa0172590	Msa1328870	0.800196	1.614203e-48	-8.615850e-47
Msa0172590	Msa1331650	0.814654	1.380041e-51	-8.615850e-47
Msa0172590	Msa1333500	0.816627	5.017691e-52	-8.615850e-47
Msa0172590	Msa1339230	0.810670	1.027156e-50	-8.615850e-47
Msa0172590	Msa1342810	0.808582	2.885708e-50	-8.615850e-47
Msa0172590	Msa1372030	0.818920	1.523769e-52	-8.615850e-47
Msa0172590	Msa1381800	0.827211	1.772987e-54	-8.615850e-47
Msa0172590	Msa1389820	0.832259	1.046931e-55	-8.615850e-47
Msa0172590	Msa1393560	0.831959	1.241763e-55	-8.615850e-47
Msa0172590	Msa1398530	0.817876	2.627146e-52	-8.615850e-47
Msa0172590	Msa1408160	0.805012	1.639584e-49	-8.615850e-47
Msa0172590	Msa1420830	0.804306	2.301653e-49	-8.615850e-47
Msa0172590	Msa1426320	0.818853	1.577880e-52	-8.615850e-47
Msa0172590	Msa1448960	0.807196	5.687129e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0172590	MtrunA17_Chr1g0190481	97.653	213	3	2	1	213	1	211	5.62e-146	405
Msa0172590	MtrunA17_Chr7g0274341	64.378	233	57	10	1	213	1	227	1.66e-62	194
Msa0172590	MtrunA17_Chr8g0346111	59.140	93	33	4	7	97	6	95	8.05e-26	99.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0172590	AT5G28640.1	58.798	233	53	8	1	213	1	210	1.57e-55	176
Msa0172590	AT4G00850.1	38.428	229	95	10	7	203	6	220	9.05e-27	102
Msa0172590	AT4G00850.2	51.327	113	42	4	7	107	6	117	1.06e-24	97.1
Msa0172590	AT1G01160.1	61.644	73	26	2	2	73	3	74	3.14e-21	87.4
Msa0172590	AT1G01160.2	42.453	106	27	2	2	73	3	108	4.21e-16	74.7
Msa0172590	AT5G28640.2	47.059	170	48	7	64	213	1	148	3.42e-11	59.7
Msa0172590	AT5G28640.3	47.059	170	48	7	64	213	1	148	3.42e-11	59.7

Find 76 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGCTCTTGTGTAAAGTTT+TGG	0.241797	1_4:+57717705	Msa0172590:three_prime_UTR
CCTAATCCTCCTAACTAAAA+AGG	0.244213	1_4:-57717536	None:intergenic
GATGACACAACAACAATTAA+TGG	0.291040	1_4:+57717168	Msa0172590:CDS
CGGTGAGCTTGCCAGAGTTC+TGG	0.291829	1_4:-57716136	None:intergenic
GTTTCTTTCTGCTCTTGTTC+AGG	0.296487	1_4:+57715761	Msa0172590:five_prime_UTR
ACCCTTTACCTAAAATCTTC+TGG	0.314141	1_4:+57717466	Msa0172590:CDS
CAAGGTCACGCACCTTTGTT+TGG	0.315774	1_4:+57715787	Msa0172590:five_prime_UTR
GCCAGGCATAGTAGGTGGTT+GGG	0.340247	1_4:-57716602	None:intergenic
GATTTCTCTGCAGCCTTGAT+TGG	0.360123	1_4:-57716546	None:intergenic
TCATGGGCTGCATCTGCATC+AGG	0.386454	1_4:-57715860	None:intergenic
GGCCAGGCATAGTAGGTGGT+TGG	0.392149	1_4:-57716603	None:intergenic
TGATCAGTAGTGACGTTGTT+AGG	0.399937	1_4:-57715897	None:intergenic
TGCTGCATCATTCCACTTGA+AGG	0.403024	1_4:-57717109	None:intergenic
AATGAGGTTGCTCAATTTCA+AGG	0.409443	1_4:+57717734	Msa0172590:three_prime_UTR
TGGTAAAACTAATTAGTTCC+TGG	0.422692	1_4:+57717513	Msa0172590:three_prime_UTR
TTCAACAATCTTGAGAATCA+AGG	0.434695	1_4:-57716111	None:intergenic
CACTACTGATCATATTCAAC+AGG	0.437472	1_4:+57715908	Msa0172590:CDS
TGTACCTGGCCAGGCATAGT+AGG	0.442060	1_4:-57716610	None:intergenic
GGGAATTAGTTAAGCAAGAA+TGG	0.444582	1_4:+57717493	Msa0172590:exon
CTGCTCTTGTTCAGGTCACA+AGG	0.447897	1_4:+57715769	Msa0172590:five_prime_UTR
CCAGGCATAGTAGGTGGTTG+GGG	0.455596	1_4:-57716601	None:intergenic
GGCAATTCATCGTTAGGTAC+TGG	0.456481	1_4:+57717319	Msa0172590:CDS
GGTCGTAGCTCGGCTGGTGA+TGG	0.457573	1_4:+57717358	Msa0172590:CDS
TACCTAAAATCTTCTGGTGA+TGG	0.461677	1_4:+57717472	Msa0172590:CDS
ACCTAAAATCTTCTGGTGAT+GGG	0.465114	1_4:+57717473	Msa0172590:CDS
GCCGAGCTACGACCAAAATC+AGG	0.475093	1_4:-57717349	None:intergenic
GTTGGAGGCAATTCATCGTT+AGG	0.483523	1_4:+57717313	Msa0172590:CDS
ATAATTTCAGGAACCAATCA+AGG	0.484218	1_4:+57716533	Msa0172590:intron
TTTCTTTGAGGCGGCTAAAG+AGG	0.487663	1_4:-57715636	None:intergenic
CCCCAACCACCTACTATGCC+TGG	0.488367	1_4:+57716601	Msa0172590:CDS
AGATAGGGGTGTACCTGGCC+AGG	0.491173	1_4:-57716619	None:intergenic
GGATAGTAAGCTGCCATCAT+GGG	0.492977	1_4:-57715876	None:intergenic
TTCAAGTGGAATGATGCAGC+AGG	0.504147	1_4:+57717111	Msa0172590:CDS
CACTCGAATTCATACCGAGT+TGG	0.508517	1_4:-57717249	None:intergenic
AGGATAGTAAGCTGCCATCA+TGG	0.510940	1_4:-57715877	None:intergenic
GAGGCAATGGTAATATTATG+AGG	0.518176	1_4:-57715617	None:intergenic
AACAGATAAACAGAAGAGTC+TGG	0.521358	1_4:-57715731	None:intergenic
CTTCACATGTTGCATAGTGA+AGG	0.521552	1_4:+57717283	Msa0172590:CDS
CAAGACATTGGAAGTGCTGA+TGG	0.526599	1_4:+57717400	Msa0172590:CDS
AGTGAAGGGGCTAACGTTGG+AGG	0.535342	1_4:+57717298	Msa0172590:CDS
GGCCGCGGTGGAAGCTCTAG+TGG	0.537316	1_4:+57717421	Msa0172590:CDS
CAAGCCTTGCAAAGCCAACT+CGG	0.540362	1_4:+57717235	Msa0172590:CDS
AGTTACTAGTACACAAACAT+AGG	0.546361	1_4:-57717669	None:intergenic
CTTCACTATGCAACATGTGA+AGG	0.550899	1_4:-57717282	None:intergenic
CTGTTCTTACTCAGCACACT+CGG	0.552381	1_4:-57716156	None:intergenic
TTCACATGTTGCATAGTGAA+GGG	0.554627	1_4:+57717284	Msa0172590:CDS
ATTGTTGAAAGCCAGAACTC+TGG	0.560643	1_4:+57716125	Msa0172590:CDS
ACCACCTACTATGCCTGGCC+AGG	0.560989	1_4:+57716606	Msa0172590:CDS
CTACACAACACTTAGAAGAG+TGG	0.563660	1_4:-57715661	None:intergenic
CATACCGAGTTGGCTTTGCA+AGG	0.565479	1_4:-57717239	None:intergenic
GGTGATGGTTTGCACGGTAG+TGG	0.566282	1_4:+57717373	Msa0172590:CDS
GGTAGTGGCAAGCAAGACAT+TGG	0.567432	1_4:+57717388	Msa0172590:CDS
TCTAGTGGTCACTCTGGTGA+TGG	0.573573	1_4:+57717436	Msa0172590:CDS
ATTGGAAGTGCTGATGGCCG+CGG	0.585066	1_4:+57717406	Msa0172590:CDS
GAGAATCAGCTATTGCAGCT+AGG	0.595794	1_4:-57716576	None:intergenic
ACATTGCAGTACCCTTCAAG+TGG	0.608273	1_4:+57717097	Msa0172590:intron
TCGGCTGGTGATGGTTTGCA+CGG	0.610652	1_4:+57717367	Msa0172590:CDS
GCTGCATCATTCCACTTGAA+GGG	0.611938	1_4:-57717108	None:intergenic
CATAGTGAAGGGGCTAACGT+TGG	0.615754	1_4:+57717295	Msa0172590:CDS
AATTCATCGTTAGGTACTGG+AGG	0.617510	1_4:+57717322	Msa0172590:CDS
TGAGGCGGCTAAAGAGGCAA+TGG	0.620919	1_4:-57715630	None:intergenic
GGAAGCTCTAGTGGTCACTC+TGG	0.631800	1_4:+57717430	Msa0172590:CDS
ACCTGGCCAGGCATAGTAGG+TGG	0.636818	1_4:-57716607	None:intergenic
CTAAGTTCAAATCCAAACAA+AGG	0.637687	1_4:-57715799	None:intergenic
ATGAATTCGAGTGGAAGTCA+AGG	0.645385	1_4:+57717259	Msa0172590:CDS
GATGCAGATGCAGCCCATGA+TGG	0.647712	1_4:+57715863	Msa0172590:CDS
GCAGGGAGGACACTACATGC+AGG	0.651199	1_4:+57717129	Msa0172590:CDS
TCACATGTTGCATAGTGAAG+GGG	0.652179	1_4:+57717285	Msa0172590:CDS
ACATTAAGTTAAGTAGCTGA+AGG	0.653572	1_4:+57717565	Msa0172590:three_prime_UTR
AGTGGTCACTCTGGTGATGG+CGG	0.666560	1_4:+57717439	Msa0172590:CDS
CTGTTGAGCATACATAAGAG+AGG	0.666776	1_4:-57717200	None:intergenic
TCAAGTGGAATGATGCAGCA+GGG	0.669197	1_4:+57717112	Msa0172590:CDS
CAACTCGGTATGAATTCGAG+TGG	0.681006	1_4:+57717250	Msa0172590:CDS
GGAAGTGCTGATGGCCGCGG+TGG	0.694316	1_4:+57717409	Msa0172590:CDS
AGTGGAATGATGCAGCAGGG+AGG	0.729356	1_4:+57717115	Msa0172590:CDS
GACCACTAGAGCTTCCACCG+CGG	0.784566	1_4:-57717423	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTGTTTTATGTTTAATTAAA+AGG	+	chr1_4:57717626-57717645	Msa0172590:three_prime_UTR	10.0%
!!!	TTGTTTTATGTTTAATTAAA+AGG	+	chr1_4:57717626-57717645	Msa0172590:three_prime_UTR	10.0%
!!!	TTTATTTTATTAAGGTTTGT+GGG	-	chr1_4:57716290-57716309	None:intergenic	15.0%
!!	ATATATACCTAAACAATTAT+TGG	+	chr1_4:57716506-57716525	Msa0172590:intron	15.0%
!!	AAATAATAGTAAAATGTATC+AGG	+	chr1_4:57716948-57716967	Msa0172590:intron	15.0%
!!!	TTTATTTTATTAAGGTTTGT+GGG	-	chr1_4:57716290-57716309	None:intergenic	15.0%
!!	ATATATACCTAAACAATTAT+TGG	+	chr1_4:57716506-57716525	Msa0172590:intron	15.0%
!!	AAATAATAGTAAAATGTATC+AGG	+	chr1_4:57716948-57716967	Msa0172590:intron	15.0%
!!!	TTATTTTATTAAGGTTTGTG+GGG	-	chr1_4:57716289-57716308	None:intergenic	20.0%
!!!	CTTTATTTTATTAAGGTTTG+TGG	-	chr1_4:57716291-57716310	None:intergenic	20.0%
!!!	TTTACTAGTATTAGCTTTTT+TGG	+	chr1_4:57716425-57716444	Msa0172590:intron	20.0%
!!	AAACATATTCATATGTACAA+GGG	-	chr1_4:57716876-57716895	None:intergenic	20.0%
!!	TAAACATATTCATATGTACA+AGG	-	chr1_4:57716877-57716896	None:intergenic	20.0%
!!	GTATTAATTAAGTGTACATT+TGG	+	chr1_4:57716923-57716942	Msa0172590:intron	20.0%
!!!	TTATTTTATTAAGGTTTGTG+GGG	-	chr1_4:57716289-57716308	None:intergenic	20.0%
!!!	CTTTATTTTATTAAGGTTTG+TGG	-	chr1_4:57716291-57716310	None:intergenic	20.0%
!!!	TTTACTAGTATTAGCTTTTT+TGG	+	chr1_4:57716425-57716444	Msa0172590:intron	20.0%
!!	AAACATATTCATATGTACAA+GGG	-	chr1_4:57716876-57716895	None:intergenic	20.0%
!!	TAAACATATTCATATGTACA+AGG	-	chr1_4:57716877-57716896	None:intergenic	20.0%
!!	GTATTAATTAAGTGTACATT+TGG	+	chr1_4:57716923-57716942	Msa0172590:intron	20.0%
!!	CTAAAATGTTACAACCTTTT+TGG	+	chr1_4:57716371-57716390	Msa0172590:intron	25.0%
!	TATAGCACCAATAATTGTTT+AGG	-	chr1_4:57716516-57716535	None:intergenic	25.0%
!!!	ATTATTGGTGCTATAATTTC+AGG	+	chr1_4:57716521-57716540	Msa0172590:intron	25.0%
!!	AACATTCTGAAAATAGATAG+GGG	-	chr1_4:57716636-57716655	None:intergenic	25.0%
!!	CAACATTCTGAAAATAGATA+GGG	-	chr1_4:57716637-57716656	None:intergenic	25.0%
!!	ACAACATTCTGAAAATAGAT+AGG	-	chr1_4:57716638-57716657	None:intergenic	25.0%
!	GTGAAAAATGAAAGTTAGAA+AGG	-	chr1_4:57716782-57716801	None:intergenic	25.0%
!	ATTAATACTACTAAGCATCA+TGG	-	chr1_4:57716911-57716930	None:intergenic	25.0%
!!	AACACAAATTTCTTCTAAAG+AGG	+	chr1_4:57716998-57717017	Msa0172590:intron	25.0%
!!	ACACAAATTTCTTCTAAAGA+GGG	+	chr1_4:57716999-57717018	Msa0172590:intron	25.0%
!!	CTAAAATGTTACAACCTTTT+TGG	+	chr1_4:57716371-57716390	Msa0172590:intron	25.0%
!	TATAGCACCAATAATTGTTT+AGG	-	chr1_4:57716516-57716535	None:intergenic	25.0%
!!!	ATTATTGGTGCTATAATTTC+AGG	+	chr1_4:57716521-57716540	Msa0172590:intron	25.0%
!!	AACATTCTGAAAATAGATAG+GGG	-	chr1_4:57716636-57716655	None:intergenic	25.0%
!!	CAACATTCTGAAAATAGATA+GGG	-	chr1_4:57716637-57716656	None:intergenic	25.0%
!!	ACAACATTCTGAAAATAGAT+AGG	-	chr1_4:57716638-57716657	None:intergenic	25.0%
!	GTGAAAAATGAAAGTTAGAA+AGG	-	chr1_4:57716782-57716801	None:intergenic	25.0%
!	ATTAATACTACTAAGCATCA+TGG	-	chr1_4:57716911-57716930	None:intergenic	25.0%
!!	AACACAAATTTCTTCTAAAG+AGG	+	chr1_4:57716998-57717017	Msa0172590:intron	25.0%
!!	ACACAAATTTCTTCTAAAGA+GGG	+	chr1_4:57716999-57717018	Msa0172590:intron	25.0%
	CTAAGTTCAAATCCAAACAA+AGG	-	chr1_4:57715802-57715821	None:intergenic	30.0%
	CCAATGGAATTGAAACAAAA+AGG	-	chr1_4:57715956-57715975	None:intergenic	30.0%
!!	CCTTTTTGTTTCAATTCCAT+TGG	+	chr1_4:57715953-57715972	Msa0172590:intron	30.0%
	TTCAACAATCTTGAGAATCA+AGG	-	chr1_4:57716114-57716133	None:intergenic	30.0%
!!!	TGTCACTTTCTATATTTTGC+AGG	+	chr1_4:57716232-57716251	Msa0172590:intron	30.0%
!!!	GTCATCATGTTTTGAAACTT+TGG	-	chr1_4:57716345-57716364	None:intergenic	30.0%
!!!	ACTAGTATTAGCTTTTTTGG+TGG	+	chr1_4:57716428-57716447	Msa0172590:intron	30.0%
!!!	CTAGTATTAGCTTTTTTGGT+GGG	+	chr1_4:57716429-57716448	Msa0172590:intron	30.0%
!!!	TAGTATTAGCTTTTTTGGTG+GGG	+	chr1_4:57716430-57716449	Msa0172590:intron	30.0%
	AGATCAAAATTCTGCTTACT+TGG	+	chr1_4:57716469-57716488	Msa0172590:intron	30.0%
	ATAATTTCAGGAACCAATCA+AGG	+	chr1_4:57716533-57716552	Msa0172590:intron	30.0%
	ACAAATCAATCATTGTTGTG+AGG	-	chr1_4:57716692-57716711	None:intergenic	30.0%
	ACATAATAAGAGCTAGAGTT+TGG	-	chr1_4:57716750-57716769	None:intergenic	30.0%
	GAAAGTTAGAAAGGAAACTA+GGG	-	chr1_4:57716773-57716792	None:intergenic	30.0%
	TGAAAGTTAGAAAGGAAACT+AGG	-	chr1_4:57716774-57716793	None:intergenic	30.0%
	AAAACATCTAGACACACAAT+AGG	-	chr1_4:57716846-57716865	None:intergenic	30.0%
	GGGTTTATATTTAGACACAT+AGG	+	chr1_4:57717019-57717038	Msa0172590:intron	30.0%
!	ATTACTGCTATTTGACCATT+TGG	+	chr1_4:57717055-57717074	Msa0172590:intron	30.0%
	GATGACACAACAACAATTAA+TGG	+	chr1_4:57717168-57717187	Msa0172590:CDS	30.0%
!!	ACCAGAAGATTTTAGGTAAA+GGG	-	chr1_4:57717470-57717489	None:intergenic	30.0%
	TGGTAAAACTAATTAGTTCC+TGG	+	chr1_4:57717513-57717532	Msa0172590:three_prime_UTR	30.0%
	ACATTAAGTTAAGTAGCTGA+AGG	+	chr1_4:57717565-57717584	Msa0172590:three_prime_UTR	30.0%
	AGTTACTAGTACACAAACAT+AGG	-	chr1_4:57717672-57717691	None:intergenic	30.0%
!	TATGCTCTTGTGTAAAGTTT+TGG	+	chr1_4:57717705-57717724	Msa0172590:three_prime_UTR	30.0%
	AAGAGGCAATGGTAATATTA+TGG	-	chr1_4:57715622-57715641	None:intergenic	30.0%
	CTAAGTTCAAATCCAAACAA+AGG	-	chr1_4:57715802-57715821	None:intergenic	30.0%
	CCAATGGAATTGAAACAAAA+AGG	-	chr1_4:57715956-57715975	None:intergenic	30.0%
!!	CCTTTTTGTTTCAATTCCAT+TGG	+	chr1_4:57715953-57715972	Msa0172590:intron	30.0%
	TTCAACAATCTTGAGAATCA+AGG	-	chr1_4:57716114-57716133	None:intergenic	30.0%
!!!	TGTCACTTTCTATATTTTGC+AGG	+	chr1_4:57716232-57716251	Msa0172590:intron	30.0%
!!!	GTCATCATGTTTTGAAACTT+TGG	-	chr1_4:57716345-57716364	None:intergenic	30.0%
!!!	ACTAGTATTAGCTTTTTTGG+TGG	+	chr1_4:57716428-57716447	Msa0172590:intron	30.0%
!!!	CTAGTATTAGCTTTTTTGGT+GGG	+	chr1_4:57716429-57716448	Msa0172590:intron	30.0%
!!!	TAGTATTAGCTTTTTTGGTG+GGG	+	chr1_4:57716430-57716449	Msa0172590:intron	30.0%
	AGATCAAAATTCTGCTTACT+TGG	+	chr1_4:57716469-57716488	Msa0172590:intron	30.0%
	ATAATTTCAGGAACCAATCA+AGG	+	chr1_4:57716533-57716552	Msa0172590:intron	30.0%
	ACAAATCAATCATTGTTGTG+AGG	-	chr1_4:57716692-57716711	None:intergenic	30.0%
	ACATAATAAGAGCTAGAGTT+TGG	-	chr1_4:57716750-57716769	None:intergenic	30.0%
	GAAAGTTAGAAAGGAAACTA+GGG	-	chr1_4:57716773-57716792	None:intergenic	30.0%
	TGAAAGTTAGAAAGGAAACT+AGG	-	chr1_4:57716774-57716793	None:intergenic	30.0%
	AAAACATCTAGACACACAAT+AGG	-	chr1_4:57716846-57716865	None:intergenic	30.0%
	GGGTTTATATTTAGACACAT+AGG	+	chr1_4:57717019-57717038	Msa0172590:intron	30.0%
!	ATTACTGCTATTTGACCATT+TGG	+	chr1_4:57717055-57717074	Msa0172590:intron	30.0%
	GATGACACAACAACAATTAA+TGG	+	chr1_4:57717168-57717187	Msa0172590:CDS	30.0%
!!	ACCAGAAGATTTTAGGTAAA+GGG	-	chr1_4:57717470-57717489	None:intergenic	30.0%
	TGGTAAAACTAATTAGTTCC+TGG	+	chr1_4:57717513-57717532	Msa0172590:three_prime_UTR	30.0%
	ACATTAAGTTAAGTAGCTGA+AGG	+	chr1_4:57717565-57717584	Msa0172590:three_prime_UTR	30.0%
	AGTTACTAGTACACAAACAT+AGG	-	chr1_4:57717672-57717691	None:intergenic	30.0%
!	TATGCTCTTGTGTAAAGTTT+TGG	+	chr1_4:57717705-57717724	Msa0172590:three_prime_UTR	30.0%
!	AGAAGAGTGGTTTTTCTTTG+AGG	-	chr1_4:57715651-57715670	None:intergenic	35.0%
	AACAGATAAACAGAAGAGTC+TGG	-	chr1_4:57715734-57715753	None:intergenic	35.0%
	CACTACTGATCATATTCAAC+AGG	+	chr1_4:57715908-57715927	Msa0172590:CDS	35.0%
	AGGAGAAGAAGAAGAAAGAA+AGG	-	chr1_4:57715936-57715955	None:intergenic	35.0%
!!!	TTTTTCTAAGATGTGGGAGT+GGG	+	chr1_4:57716256-57716275	Msa0172590:intron	35.0%
!!!	AGTATTAGCTTTTTTGGTGG+GGG	+	chr1_4:57716431-57716450	Msa0172590:intron	35.0%
	AAGAGCTAGAGTTTGGTAAA+TGG	-	chr1_4:57716743-57716762	None:intergenic	35.0%
	ATGTCATTCAGAAGATTGTG+AGG	-	chr1_4:57717081-57717100	None:intergenic	35.0%
	TTCACATGTTGCATAGTGAA+GGG	+	chr1_4:57717284-57717303	Msa0172590:CDS	35.0%
	ACCCTTTACCTAAAATCTTC+TGG	+	chr1_4:57717466-57717485	Msa0172590:CDS	35.0%
!!	CACCAGAAGATTTTAGGTAA+AGG	-	chr1_4:57717471-57717490	None:intergenic	35.0%
	TACCTAAAATCTTCTGGTGA+TGG	+	chr1_4:57717472-57717491	Msa0172590:CDS	35.0%
	ACCTAAAATCTTCTGGTGAT+GGG	+	chr1_4:57717473-57717492	Msa0172590:CDS	35.0%
	GGGAATTAGTTAAGCAAGAA+TGG	+	chr1_4:57717493-57717512	Msa0172590:exon	35.0%
	CCTAATCCTCCTAACTAAAA+AGG	-	chr1_4:57717539-57717558	None:intergenic	35.0%
!!!	CCTTTTTAGTTAGGAGGATT+AGG	+	chr1_4:57717536-57717555	Msa0172590:three_prime_UTR	35.0%
!!	AAAGTTTTGGCCAGAAAATG+AGG	+	chr1_4:57717718-57717737	Msa0172590:three_prime_UTR	35.0%
!	AATTGAGCAACCTCATTTTC+TGG	-	chr1_4:57717731-57717750	None:intergenic	35.0%
	AATGAGGTTGCTCAATTTCA+AGG	+	chr1_4:57717734-57717753	Msa0172590:three_prime_UTR	35.0%
!	AGAAGAGTGGTTTTTCTTTG+AGG	-	chr1_4:57715651-57715670	None:intergenic	35.0%
	AACAGATAAACAGAAGAGTC+TGG	-	chr1_4:57715734-57715753	None:intergenic	35.0%
	CACTACTGATCATATTCAAC+AGG	+	chr1_4:57715908-57715927	Msa0172590:CDS	35.0%
	AGGAGAAGAAGAAGAAAGAA+AGG	-	chr1_4:57715936-57715955	None:intergenic	35.0%
!!!	TTTTTCTAAGATGTGGGAGT+GGG	+	chr1_4:57716256-57716275	Msa0172590:intron	35.0%
!!!	AGTATTAGCTTTTTTGGTGG+GGG	+	chr1_4:57716431-57716450	Msa0172590:intron	35.0%
	AAGAGCTAGAGTTTGGTAAA+TGG	-	chr1_4:57716743-57716762	None:intergenic	35.0%
	ATGTCATTCAGAAGATTGTG+AGG	-	chr1_4:57717081-57717100	None:intergenic	35.0%
	TTCACATGTTGCATAGTGAA+GGG	+	chr1_4:57717284-57717303	Msa0172590:CDS	35.0%
	ACCCTTTACCTAAAATCTTC+TGG	+	chr1_4:57717466-57717485	Msa0172590:CDS	35.0%
!!	CACCAGAAGATTTTAGGTAA+AGG	-	chr1_4:57717471-57717490	None:intergenic	35.0%
	TACCTAAAATCTTCTGGTGA+TGG	+	chr1_4:57717472-57717491	Msa0172590:CDS	35.0%
	ACCTAAAATCTTCTGGTGAT+GGG	+	chr1_4:57717473-57717492	Msa0172590:CDS	35.0%
	GGGAATTAGTTAAGCAAGAA+TGG	+	chr1_4:57717493-57717512	Msa0172590:exon	35.0%
	CCTAATCCTCCTAACTAAAA+AGG	-	chr1_4:57717539-57717558	None:intergenic	35.0%
!!!	CCTTTTTAGTTAGGAGGATT+AGG	+	chr1_4:57717536-57717555	Msa0172590:three_prime_UTR	35.0%
!!	AAAGTTTTGGCCAGAAAATG+AGG	+	chr1_4:57717718-57717737	Msa0172590:three_prime_UTR	35.0%
!	AATTGAGCAACCTCATTTTC+TGG	-	chr1_4:57717731-57717750	None:intergenic	35.0%
	AATGAGGTTGCTCAATTTCA+AGG	+	chr1_4:57717734-57717753	Msa0172590:three_prime_UTR	35.0%
!!	AGAGTGGTTTTTCTTTGAGG+CGG	-	chr1_4:57715648-57715667	None:intergenic	40.0%
	CTACACAACACTTAGAAGAG+TGG	-	chr1_4:57715664-57715683	None:intergenic	40.0%
	GTTTCTTTCTGCTCTTGTTC+AGG	+	chr1_4:57715761-57715780	Msa0172590:five_prime_UTR	40.0%
	TGATCAGTAGTGACGTTGTT+AGG	-	chr1_4:57715900-57715919	None:intergenic	40.0%
!!	AGCAGAGAAAGAGTATCCAA+TGG	-	chr1_4:57715972-57715991	None:intergenic	40.0%
	ATTGTTGAAAGCCAGAACTC+TGG	+	chr1_4:57716125-57716144	Msa0172590:CDS	40.0%
!!!	TGCAGGCTTTTTCTAAGATG+TGG	+	chr1_4:57716249-57716268	Msa0172590:intron	40.0%
!!!	GCAGGCTTTTTCTAAGATGT+GGG	+	chr1_4:57716250-57716269	Msa0172590:intron	40.0%
!!!	CTTTTTCTAAGATGTGGGAG+TGG	+	chr1_4:57716255-57716274	Msa0172590:intron	40.0%
	TCAAGATGCTGTTGCCAAAA+AGG	-	chr1_4:57716388-57716407	None:intergenic	40.0%
!	AAAATAGATAGGGGTGTACC+TGG	-	chr1_4:57716627-57716646	None:intergenic	40.0%
	GTTAGTACAAGTGACCACTT+AGG	+	chr1_4:57716656-57716675	Msa0172590:intron	40.0%
	TACAAGTGACCACTTAGGAA+GGG	+	chr1_4:57716661-57716680	Msa0172590:intron	40.0%
	CTGTTGAGCATACATAAGAG+AGG	-	chr1_4:57717203-57717222	None:intergenic	40.0%
	ATGAATTCGAGTGGAAGTCA+AGG	+	chr1_4:57717259-57717278	Msa0172590:CDS	40.0%
	CTTCACTATGCAACATGTGA+AGG	-	chr1_4:57717285-57717304	None:intergenic	40.0%
	CTTCACATGTTGCATAGTGA+AGG	+	chr1_4:57717283-57717302	Msa0172590:CDS	40.0%
	TCACATGTTGCATAGTGAAG+GGG	+	chr1_4:57717285-57717304	Msa0172590:CDS	40.0%
!!	AATTCATCGTTAGGTACTGG+AGG	+	chr1_4:57717322-57717341	Msa0172590:CDS	40.0%
!	ACTGGAGGTTTTCCTGATTT+TGG	+	chr1_4:57717337-57717356	Msa0172590:CDS	40.0%
!	TCCCATCACCAGAAGATTTT+AGG	-	chr1_4:57717477-57717496	None:intergenic	40.0%
!!!	AGTTCCTGGCCTTTTTAGTT+AGG	+	chr1_4:57717527-57717546	Msa0172590:three_prime_UTR	40.0%
!!	AGAGTGGTTTTTCTTTGAGG+CGG	-	chr1_4:57715648-57715667	None:intergenic	40.0%
	CTACACAACACTTAGAAGAG+TGG	-	chr1_4:57715664-57715683	None:intergenic	40.0%
	GTTTCTTTCTGCTCTTGTTC+AGG	+	chr1_4:57715761-57715780	Msa0172590:five_prime_UTR	40.0%
	TGATCAGTAGTGACGTTGTT+AGG	-	chr1_4:57715900-57715919	None:intergenic	40.0%
!!	AGCAGAGAAAGAGTATCCAA+TGG	-	chr1_4:57715972-57715991	None:intergenic	40.0%
	ATTGTTGAAAGCCAGAACTC+TGG	+	chr1_4:57716125-57716144	Msa0172590:CDS	40.0%
!!!	TGCAGGCTTTTTCTAAGATG+TGG	+	chr1_4:57716249-57716268	Msa0172590:intron	40.0%
!!!	GCAGGCTTTTTCTAAGATGT+GGG	+	chr1_4:57716250-57716269	Msa0172590:intron	40.0%
!!!	CTTTTTCTAAGATGTGGGAG+TGG	+	chr1_4:57716255-57716274	Msa0172590:intron	40.0%
	TCAAGATGCTGTTGCCAAAA+AGG	-	chr1_4:57716388-57716407	None:intergenic	40.0%
!	AAAATAGATAGGGGTGTACC+TGG	-	chr1_4:57716627-57716646	None:intergenic	40.0%
	GTTAGTACAAGTGACCACTT+AGG	+	chr1_4:57716656-57716675	Msa0172590:intron	40.0%
	TACAAGTGACCACTTAGGAA+GGG	+	chr1_4:57716661-57716680	Msa0172590:intron	40.0%
	CTGTTGAGCATACATAAGAG+AGG	-	chr1_4:57717203-57717222	None:intergenic	40.0%
	ATGAATTCGAGTGGAAGTCA+AGG	+	chr1_4:57717259-57717278	Msa0172590:CDS	40.0%
	CTTCACTATGCAACATGTGA+AGG	-	chr1_4:57717285-57717304	None:intergenic	40.0%
	CTTCACATGTTGCATAGTGA+AGG	+	chr1_4:57717283-57717302	Msa0172590:CDS	40.0%
	TCACATGTTGCATAGTGAAG+GGG	+	chr1_4:57717285-57717304	Msa0172590:CDS	40.0%
!!	AATTCATCGTTAGGTACTGG+AGG	+	chr1_4:57717322-57717341	Msa0172590:CDS	40.0%
!	ACTGGAGGTTTTCCTGATTT+TGG	+	chr1_4:57717337-57717356	Msa0172590:CDS	40.0%
!	TCCCATCACCAGAAGATTTT+AGG	-	chr1_4:57717477-57717496	None:intergenic	40.0%
!!!	AGTTCCTGGCCTTTTTAGTT+AGG	+	chr1_4:57717527-57717546	Msa0172590:three_prime_UTR	40.0%
!!	TTTCTTTGAGGCGGCTAAAG+AGG	-	chr1_4:57715639-57715658	None:intergenic	45.0%
	GGATAGTAAGCTGCCATCAT+GGG	-	chr1_4:57715879-57715898	None:intergenic	45.0%
	AGGATAGTAAGCTGCCATCA+TGG	-	chr1_4:57715880-57715899	None:intergenic	45.0%
	CTGTTCTTACTCAGCACACT+CGG	-	chr1_4:57716159-57716178	None:intergenic	45.0%
!!!	ATTAGCTTTTTTGGTGGGGG+AGG	+	chr1_4:57716434-57716453	Msa0172590:intron	45.0%
!!!	TTAGCTTTTTTGGTGGGGGA+GGG	+	chr1_4:57716435-57716454	Msa0172590:intron	45.0%
	GATTTCTCTGCAGCCTTGAT+TGG	-	chr1_4:57716549-57716568	None:intergenic	45.0%
	GAGAATCAGCTATTGCAGCT+AGG	-	chr1_4:57716579-57716598	None:intergenic	45.0%
	GTACAAGTGACCACTTAGGA+AGG	+	chr1_4:57716660-57716679	Msa0172590:intron	45.0%
	ACAAGTGACCACTTAGGAAG+GGG	+	chr1_4:57716662-57716681	Msa0172590:intron	45.0%
	CAGAAGATTGTGAGGCCAAA+TGG	-	chr1_4:57717073-57717092	None:intergenic	45.0%
	ACATTGCAGTACCCTTCAAG+TGG	+	chr1_4:57717097-57717116	Msa0172590:intron	45.0%
	GCTGCATCATTCCACTTGAA+GGG	-	chr1_4:57717111-57717130	None:intergenic	45.0%
	TGCTGCATCATTCCACTTGA+AGG	-	chr1_4:57717112-57717131	None:intergenic	45.0%
	TTCAAGTGGAATGATGCAGC+AGG	+	chr1_4:57717111-57717130	Msa0172590:CDS	45.0%
	TCAAGTGGAATGATGCAGCA+GGG	+	chr1_4:57717112-57717131	Msa0172590:CDS	45.0%
	CACTCGAATTCATACCGAGT+TGG	-	chr1_4:57717252-57717271	None:intergenic	45.0%
	CAACTCGGTATGAATTCGAG+TGG	+	chr1_4:57717250-57717269	Msa0172590:CDS	45.0%
	GTTGGAGGCAATTCATCGTT+AGG	+	chr1_4:57717313-57717332	Msa0172590:CDS	45.0%
	GGCAATTCATCGTTAGGTAC+TGG	+	chr1_4:57717319-57717338	Msa0172590:CDS	45.0%
!!	TCCTGATTTTGGTCGTAGCT+CGG	+	chr1_4:57717348-57717367	Msa0172590:CDS	45.0%
!!	CAAGACATTGGAAGTGCTGA+TGG	+	chr1_4:57717400-57717419	Msa0172590:CDS	45.0%
!!!	TCCTGGCCTTTTTAGTTAGG+AGG	+	chr1_4:57717530-57717549	Msa0172590:three_prime_UTR	45.0%
	TCCTCCTAACTAAAAAGGCC+AGG	-	chr1_4:57717534-57717553	None:intergenic	45.0%
!!	TTTCTTTGAGGCGGCTAAAG+AGG	-	chr1_4:57715639-57715658	None:intergenic	45.0%
	GGATAGTAAGCTGCCATCAT+GGG	-	chr1_4:57715879-57715898	None:intergenic	45.0%
	AGGATAGTAAGCTGCCATCA+TGG	-	chr1_4:57715880-57715899	None:intergenic	45.0%
	CTGTTCTTACTCAGCACACT+CGG	-	chr1_4:57716159-57716178	None:intergenic	45.0%
!!!	ATTAGCTTTTTTGGTGGGGG+AGG	+	chr1_4:57716434-57716453	Msa0172590:intron	45.0%
!!!	TTAGCTTTTTTGGTGGGGGA+GGG	+	chr1_4:57716435-57716454	Msa0172590:intron	45.0%
	GATTTCTCTGCAGCCTTGAT+TGG	-	chr1_4:57716549-57716568	None:intergenic	45.0%
	GAGAATCAGCTATTGCAGCT+AGG	-	chr1_4:57716579-57716598	None:intergenic	45.0%
	GTACAAGTGACCACTTAGGA+AGG	+	chr1_4:57716660-57716679	Msa0172590:intron	45.0%
	ACAAGTGACCACTTAGGAAG+GGG	+	chr1_4:57716662-57716681	Msa0172590:intron	45.0%
	CAGAAGATTGTGAGGCCAAA+TGG	-	chr1_4:57717073-57717092	None:intergenic	45.0%
	ACATTGCAGTACCCTTCAAG+TGG	+	chr1_4:57717097-57717116	Msa0172590:intron	45.0%
	GCTGCATCATTCCACTTGAA+GGG	-	chr1_4:57717111-57717130	None:intergenic	45.0%
	TGCTGCATCATTCCACTTGA+AGG	-	chr1_4:57717112-57717131	None:intergenic	45.0%
	TTCAAGTGGAATGATGCAGC+AGG	+	chr1_4:57717111-57717130	Msa0172590:CDS	45.0%
	TCAAGTGGAATGATGCAGCA+GGG	+	chr1_4:57717112-57717131	Msa0172590:CDS	45.0%
	CACTCGAATTCATACCGAGT+TGG	-	chr1_4:57717252-57717271	None:intergenic	45.0%
	CAACTCGGTATGAATTCGAG+TGG	+	chr1_4:57717250-57717269	Msa0172590:CDS	45.0%
	GTTGGAGGCAATTCATCGTT+AGG	+	chr1_4:57717313-57717332	Msa0172590:CDS	45.0%
	GGCAATTCATCGTTAGGTAC+TGG	+	chr1_4:57717319-57717338	Msa0172590:CDS	45.0%
!!	TCCTGATTTTGGTCGTAGCT+CGG	+	chr1_4:57717348-57717367	Msa0172590:CDS	45.0%
!!	CAAGACATTGGAAGTGCTGA+TGG	+	chr1_4:57717400-57717419	Msa0172590:CDS	45.0%
!!!	TCCTGGCCTTTTTAGTTAGG+AGG	+	chr1_4:57717530-57717549	Msa0172590:three_prime_UTR	45.0%
	TCCTCCTAACTAAAAAGGCC+AGG	-	chr1_4:57717534-57717553	None:intergenic	45.0%
!!	AAAATAAATAGTTAAAAAAA+GGG	-	chr1_4:57716052-57716071	None:intergenic	5.0%
!!	AAAAATAAATAGTTAAAAAA+AGG	-	chr1_4:57716053-57716072	None:intergenic	5.0%
!!!	AAAAAAACTTTATTTTATTA+AGG	-	chr1_4:57716298-57716317	None:intergenic	5.0%
!!!	TTTGAAATAAAATTTATTTT+TGG	+	chr1_4:57716974-57716993	Msa0172590:intron	5.0%
!!	AAAATAAATAGTTAAAAAAA+GGG	-	chr1_4:57716052-57716071	None:intergenic	5.0%
!!	AAAAATAAATAGTTAAAAAA+AGG	-	chr1_4:57716053-57716072	None:intergenic	5.0%
!!!	AAAAAAACTTTATTTTATTA+AGG	-	chr1_4:57716298-57716317	None:intergenic	5.0%
!!!	TTTGAAATAAAATTTATTTT+TGG	+	chr1_4:57716974-57716993	Msa0172590:intron	5.0%
	CTGCTCTTGTTCAGGTCACA+AGG	+	chr1_4:57715769-57715788	Msa0172590:five_prime_UTR	50.0%
	CAAGGTCACGCACCTTTGTT+TGG	+	chr1_4:57715787-57715806	Msa0172590:five_prime_UTR	50.0%
	CAAGCCTTGCAAAGCCAACT+CGG	+	chr1_4:57717235-57717254	Msa0172590:CDS	50.0%
!!	CATACCGAGTTGGCTTTGCA+AGG	-	chr1_4:57717242-57717261	None:intergenic	50.0%
	CATAGTGAAGGGGCTAACGT+TGG	+	chr1_4:57717295-57717314	Msa0172590:CDS	50.0%
!	GGTAGTGGCAAGCAAGACAT+TGG	+	chr1_4:57717388-57717407	Msa0172590:CDS	50.0%
	TCTAGTGGTCACTCTGGTGA+TGG	+	chr1_4:57717436-57717455	Msa0172590:CDS	50.0%
	CTGCTCTTGTTCAGGTCACA+AGG	+	chr1_4:57715769-57715788	Msa0172590:five_prime_UTR	50.0%
	CAAGGTCACGCACCTTTGTT+TGG	+	chr1_4:57715787-57715806	Msa0172590:five_prime_UTR	50.0%
	CAAGCCTTGCAAAGCCAACT+CGG	+	chr1_4:57717235-57717254	Msa0172590:CDS	50.0%
!!	CATACCGAGTTGGCTTTGCA+AGG	-	chr1_4:57717242-57717261	None:intergenic	50.0%
	CATAGTGAAGGGGCTAACGT+TGG	+	chr1_4:57717295-57717314	Msa0172590:CDS	50.0%
!	GGTAGTGGCAAGCAAGACAT+TGG	+	chr1_4:57717388-57717407	Msa0172590:CDS	50.0%
	TCTAGTGGTCACTCTGGTGA+TGG	+	chr1_4:57717436-57717455	Msa0172590:CDS	50.0%
	TGAGGCGGCTAAAGAGGCAA+TGG	-	chr1_4:57715633-57715652	None:intergenic	55.0%
!	TCATGGGCTGCATCTGCATC+AGG	-	chr1_4:57715863-57715882	None:intergenic	55.0%
	GATGCAGATGCAGCCCATGA+TGG	+	chr1_4:57715863-57715882	Msa0172590:CDS	55.0%
	CCAGGCATAGTAGGTGGTTG+GGG	-	chr1_4:57716604-57716623	None:intergenic	55.0%
	GCCAGGCATAGTAGGTGGTT+GGG	-	chr1_4:57716605-57716624	None:intergenic	55.0%
	TGTACCTGGCCAGGCATAGT+AGG	-	chr1_4:57716613-57716632	None:intergenic	55.0%
	GAGGTGAACCCCTTCCTAAG+TGG	-	chr1_4:57716673-57716692	None:intergenic	55.0%
	AGTGGAATGATGCAGCAGGG+AGG	+	chr1_4:57717115-57717134	Msa0172590:CDS	55.0%
	AGTGAAGGGGCTAACGTTGG+AGG	+	chr1_4:57717298-57717317	Msa0172590:CDS	55.0%
	GCCGAGCTACGACCAAAATC+AGG	-	chr1_4:57717352-57717371	None:intergenic	55.0%
!!	GATTTTGGTCGTAGCTCGGC+TGG	+	chr1_4:57717352-57717371	Msa0172590:CDS	55.0%
!!	TCGGCTGGTGATGGTTTGCA+CGG	+	chr1_4:57717367-57717386	Msa0172590:CDS	55.0%
!	GGTGATGGTTTGCACGGTAG+TGG	+	chr1_4:57717373-57717392	Msa0172590:CDS	55.0%
!!	ATTGGAAGTGCTGATGGCCG+CGG	+	chr1_4:57717406-57717425	Msa0172590:CDS	55.0%
!	GGAAGCTCTAGTGGTCACTC+TGG	+	chr1_4:57717430-57717449	Msa0172590:CDS	55.0%
!!	AGTGGTCACTCTGGTGATGG+CGG	+	chr1_4:57717439-57717458	Msa0172590:CDS	55.0%
	TGAGGCGGCTAAAGAGGCAA+TGG	-	chr1_4:57715633-57715652	None:intergenic	55.0%
!	TCATGGGCTGCATCTGCATC+AGG	-	chr1_4:57715863-57715882	None:intergenic	55.0%
	GATGCAGATGCAGCCCATGA+TGG	+	chr1_4:57715863-57715882	Msa0172590:CDS	55.0%
	CCAGGCATAGTAGGTGGTTG+GGG	-	chr1_4:57716604-57716623	None:intergenic	55.0%
	GCCAGGCATAGTAGGTGGTT+GGG	-	chr1_4:57716605-57716624	None:intergenic	55.0%
	TGTACCTGGCCAGGCATAGT+AGG	-	chr1_4:57716613-57716632	None:intergenic	55.0%
	GAGGTGAACCCCTTCCTAAG+TGG	-	chr1_4:57716673-57716692	None:intergenic	55.0%
	AGTGGAATGATGCAGCAGGG+AGG	+	chr1_4:57717115-57717134	Msa0172590:CDS	55.0%
	AGTGAAGGGGCTAACGTTGG+AGG	+	chr1_4:57717298-57717317	Msa0172590:CDS	55.0%
	GCCGAGCTACGACCAAAATC+AGG	-	chr1_4:57717352-57717371	None:intergenic	55.0%
!!	GATTTTGGTCGTAGCTCGGC+TGG	+	chr1_4:57717352-57717371	Msa0172590:CDS	55.0%
!!	TCGGCTGGTGATGGTTTGCA+CGG	+	chr1_4:57717367-57717386	Msa0172590:CDS	55.0%
!	GGTGATGGTTTGCACGGTAG+TGG	+	chr1_4:57717373-57717392	Msa0172590:CDS	55.0%
!!	ATTGGAAGTGCTGATGGCCG+CGG	+	chr1_4:57717406-57717425	Msa0172590:CDS	55.0%
!	GGAAGCTCTAGTGGTCACTC+TGG	+	chr1_4:57717430-57717449	Msa0172590:CDS	55.0%
!!	AGTGGTCACTCTGGTGATGG+CGG	+	chr1_4:57717439-57717458	Msa0172590:CDS	55.0%
	CGGTGAGCTTGCCAGAGTTC+TGG	-	chr1_4:57716139-57716158	None:intergenic	60.0%
!!!	GCTTTTTTGGTGGGGGAGGG+AGG	+	chr1_4:57716438-57716457	Msa0172590:intron	60.0%
	CCCCAACCACCTACTATGCC+TGG	+	chr1_4:57716601-57716620	Msa0172590:CDS	60.0%
	GGCCAGGCATAGTAGGTGGT+TGG	-	chr1_4:57716606-57716625	None:intergenic	60.0%
	ACCACCTACTATGCCTGGCC+AGG	+	chr1_4:57716606-57716625	Msa0172590:CDS	60.0%
	ACCTGGCCAGGCATAGTAGG+TGG	-	chr1_4:57716610-57716629	None:intergenic	60.0%
!	AGATAGGGGTGTACCTGGCC+AGG	-	chr1_4:57716622-57716641	None:intergenic	60.0%
	GCAGGGAGGACACTACATGC+AGG	+	chr1_4:57717129-57717148	Msa0172590:CDS	60.0%
	GACCACTAGAGCTTCCACCG+CGG	-	chr1_4:57717426-57717445	None:intergenic	60.0%
	CGGTGAGCTTGCCAGAGTTC+TGG	-	chr1_4:57716139-57716158	None:intergenic	60.0%
!!!	GCTTTTTTGGTGGGGGAGGG+AGG	+	chr1_4:57716438-57716457	Msa0172590:intron	60.0%
	CCCCAACCACCTACTATGCC+TGG	+	chr1_4:57716601-57716620	Msa0172590:CDS	60.0%
	GGCCAGGCATAGTAGGTGGT+TGG	-	chr1_4:57716606-57716625	None:intergenic	60.0%
	ACCACCTACTATGCCTGGCC+AGG	+	chr1_4:57716606-57716625	Msa0172590:CDS	60.0%
	ACCTGGCCAGGCATAGTAGG+TGG	-	chr1_4:57716610-57716629	None:intergenic	60.0%
!	AGATAGGGGTGTACCTGGCC+AGG	-	chr1_4:57716622-57716641	None:intergenic	60.0%
	GCAGGGAGGACACTACATGC+AGG	+	chr1_4:57717129-57717148	Msa0172590:CDS	60.0%
	GACCACTAGAGCTTCCACCG+CGG	-	chr1_4:57717426-57717445	None:intergenic	60.0%
	GGTCGTAGCTCGGCTGGTGA+TGG	+	chr1_4:57717358-57717377	Msa0172590:CDS	65.0%
	GGTCGTAGCTCGGCTGGTGA+TGG	+	chr1_4:57717358-57717377	Msa0172590:CDS	65.0%
!!	GGAAGTGCTGATGGCCGCGG+TGG	+	chr1_4:57717409-57717428	Msa0172590:CDS	70.0%
!	GGCCGCGGTGGAAGCTCTAG+TGG	+	chr1_4:57717421-57717440	Msa0172590:CDS	70.0%
!!	GGAAGTGCTGATGGCCGCGG+TGG	+	chr1_4:57717409-57717428	Msa0172590:CDS	70.0%
!	GGCCGCGGTGGAAGCTCTAG+TGG	+	chr1_4:57717421-57717440	Msa0172590:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	57715620	57717771	57715620	ID=Msa0172590;Name=Msa0172590
chr1_4	mRNA	57715620	57717771	57715620	ID=Msa0172590-mRNA-1;Parent=Msa0172590;Name=Msa0172590-mRNA-1;_AED=0.01;_eAED=0.01;_QI=229\|0.66\|0.75\|1\|1\|1\|4\|270\|213
chr1_4	exon	57715620	57715929	57715620	ID=Msa0172590-mRNA-1:exon:17669;Parent=Msa0172590-mRNA-1
chr1_4	exon	57716089	57716168	57716089	ID=Msa0172590-mRNA-1:exon:17670;Parent=Msa0172590-mRNA-1
chr1_4	exon	57716543	57716627	57716543	ID=Msa0172590-mRNA-1:exon:17671;Parent=Msa0172590-mRNA-1
chr1_4	exon	57717106	57717771	57717106	ID=Msa0172590-mRNA-1:exon:17672;Parent=Msa0172590-mRNA-1
chr1_4	five_prime_UTR	57715620	57715848	57715620	ID=Msa0172590-mRNA-1:five_prime_utr;Parent=Msa0172590-mRNA-1
chr1_4	CDS	57715849	57715929	57715849	ID=Msa0172590-mRNA-1:cds;Parent=Msa0172590-mRNA-1
chr1_4	CDS	57716089	57716168	57716089	ID=Msa0172590-mRNA-1:cds;Parent=Msa0172590-mRNA-1
chr1_4	CDS	57716543	57716627	57716543	ID=Msa0172590-mRNA-1:cds;Parent=Msa0172590-mRNA-1
chr1_4	CDS	57717106	57717501	57717106	ID=Msa0172590-mRNA-1:cds;Parent=Msa0172590-mRNA-1
chr1_4	three_prime_UTR	57717502	57717771	57717502	ID=Msa0172590-mRNA-1:three_prime_utr;Parent=Msa0172590-mRNA-1

Gene Sequence

>Msa0172590

ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTACTATCCTAACAACGTCACTACTGATCATATTCAACAGCAGTATCTTGATGAGAACAAGTCCTTGATTCTCAAGATTGTTGAAAGCCAGAACTCTGGCAAGCTCACCGAGTGTGCTGAGAACCAATCAAGGCTGCAGAGAAATCTCATGTACCTAGCTGCAATAGCTGATTCTCAACCCCAACCACCTACTATGCCTGGCCAGTACCCTTCAAGTGGAATGATGCAGCAGGGAGGACACTACATGCAGGCTCAACAAGCTCAGCAGATGACACAACAACAATTAATGGCTGCACGTTCCTCTCTTATGTATGCTCAACAGCTTCAACAGCAGCAAGCCTTGCAAAGCCAACTCGGTATGAATTCGAGTGGAAGTCAAGGCCTTCACATGTTGCATAGTGAAGGGGCTAACGTTGGAGGCAATTCATCGTTAGGTACTGGAGGTTTTCCTGATTTTGGTCGTAGCTCGGCTGGTGATGGTTTGCACGGTAGTGGCAAGCAAGACATTGGAAGTGCTGATGGCCGCGGTGGAAGCTCTAGTGGTCACTCTGGTGATGGCGGCGAAACCCTTTACCTAAAATCTTCTGGTGATGGGAATTAG

Protein sequence

>Msa0172590

MQQHLMQMQPMMAAYYPNNVTTDHIQQQYLDENKSLILKIVESQNSGKLTECAENQSRLQRNLMYLAAIADSQPQPPTMPGQYPSSGMMQQGGHYMQAQQAQQMTQQQLMAARSSLMYAQQLQQQQALQSQLGMNSSGSQGLHMLHSEGANVGGNSSLGTGGFPDFGRSSAGDGLHGSGKQDIGSADGRGGSSSGHSGDGGETLYLKSSGDGN*