Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242880 | XP_039682983.1 | 60.630 | 254 | 62 | 5 | 3 | 256 | 340 | 555 | 8.98e-88 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0807360 | Msa1242880 | 0.816754 | 4.698662e-52 | -8.615850e-47 |
| Msa1237100 | Msa1242880 | 0.863339 | 2.672394e-64 | -8.615850e-47 |
| Msa1075670 | Msa1242880 | 0.868099 | 8.394085e-66 | -8.615850e-47 |
| Msa1131660 | Msa1242880 | 0.894246 | 2.953311e-75 | -8.615850e-47 |
| Msa1131730 | Msa1242880 | 0.804184 | 2.439876e-49 | -8.615850e-47 |
| Msa0872070 | Msa1242880 | 0.803512 | 3.364700e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242880 | MtrunA17_Chr8g0363081 | 85.000 | 40 | 6 | 0 | 24 | 63 | 56 | 95 | 4.81e-18 | 77.0 |
| Msa1242880 | MtrunA17_Chr1g0167871 | 30.000 | 110 | 76 | 1 | 5 | 114 | 545 | 653 | 1.72e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 38 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTAAATTGTCTAAATGTT+TGG | 0.295647 | 8_2:+27489082 | None:intergenic |
| AGTAAATTGTCTAAATGTTT+GGG | 0.325835 | 8_2:+27489083 | None:intergenic |
| TCAGCAAATGAACGTCTTGC+AGG | 0.328519 | 8_2:+27487291 | None:intergenic |
| AAGGAATGTCTTCAGATTCT+TGG | 0.338819 | 8_2:-27489269 | Msa1242880:CDS |
| ATAAATCGGACTTTGTGTTT+TGG | 0.350479 | 8_2:-27489295 | Msa1242880:CDS |
| TGTTAACATACCTCAGAAAC+TGG | 0.367619 | 8_2:+27488120 | None:intergenic |
| TGTTAACATACCTCAGAAAC+TGG | 0.367619 | 8_2:+27488511 | None:intergenic |
| ATAAACCATACCACAGCAAC+TGG | 0.416921 | 8_2:+27488734 | None:intergenic |
| TTAAACTCTAATGATTGAGT+TGG | 0.452957 | 8_2:+27488794 | None:intergenic |
| AAATGTTTGGGATATATCAT+AGG | 0.461226 | 8_2:+27489095 | None:intergenic |
| AAACATTTAGACAATTTACT+TGG | 0.469749 | 8_2:-27489080 | Msa1242880:CDS |
| GCGTTGTGCTAGAATATTGT+CGG | 0.483634 | 8_2:-27488210 | Msa1242880:intron |
| GCGTTGTGCTAGAATATTGT+CGG | 0.483634 | 8_2:-27488601 | Msa1242880:intron |
| AGTGCATTTAGCCAACTTAA+CGG | 0.488629 | 8_2:+27487215 | None:intergenic |
| ACAGTTATCTTCCGTTAAGT+TGG | 0.497994 | 8_2:-27487226 | Msa1242880:CDS |
| TGTGTATGATGGTGATAAAT+CGG | 0.501752 | 8_2:-27489309 | Msa1242880:CDS |
| CAGGGGTCTGTTTCTGTGAG+TGG | 0.525221 | 8_2:-27487357 | Msa1242880:CDS |
| TGTGAGTGGGAAAAGTGGTC+TGG | 0.525933 | 8_2:-27487343 | Msa1242880:CDS |
| CAAATCAGTTCCAGTTTCTG+AGG | 0.530348 | 8_2:-27488130 | Msa1242880:intron |
| CAAATCAGTTCCAGTTTCTG+AGG | 0.530348 | 8_2:-27488521 | Msa1242880:intron |
| CAATTTACTTGGTCTTGAGT+TGG | 0.532056 | 8_2:-27489069 | Msa1242880:CDS |
| AATCAAATTTACCTCTTGCA+TGG | 0.532167 | 8_2:+27489220 | None:intergenic |
| ACATCTGACTGCATACCATC+AGG | 0.547580 | 8_2:+27488948 | None:intergenic |
| TTAACGGAAGATAACTGTGT+TGG | 0.551162 | 8_2:+27487231 | None:intergenic |
| GTTTCTGTGAGTGGGAAAAG+TGG | 0.557971 | 8_2:-27487348 | Msa1242880:CDS |
| GTTGTGCAAGTTGTGTATGA+TGG | 0.561221 | 8_2:-27489320 | Msa1242880:CDS |
| TTAATTCTCTGAATCACAGC+AGG | 0.565217 | 8_2:+27488984 | None:intergenic |
| ACTGCATACCATCAGGATGA+AGG | 0.568516 | 8_2:+27488955 | None:intergenic |
| AGGGGTCTGTTTCTGTGAGT+GGG | 0.572154 | 8_2:-27487356 | Msa1242880:CDS |
| AAGCGTCACCTTCATCCTGA+TGG | 0.574315 | 8_2:-27488963 | Msa1242880:CDS |
| AAAAGTAACTCCAGTTGCTG+TGG | 0.605589 | 8_2:-27488744 | Msa1242880:intron |
| TATCGTCAGTCATCTGTGCA+AGG | 0.622296 | 8_2:-27489020 | Msa1242880:CDS |
| GTGGTCTGGATCAAAGTGGT+AGG | 0.631899 | 8_2:-27487329 | Msa1242880:CDS |
| TCTTAGAAAGACCATGCAAG+AGG | 0.637724 | 8_2:-27489231 | Msa1242880:intron |
| GTTGGCTAAATGCACTGACA+AGG | 0.652484 | 8_2:-27487208 | Msa1242880:CDS |
| ACAGATGACTGACGATAATG+TGG | 0.687022 | 8_2:+27489026 | None:intergenic |
| AGATGTACAAGAAGTTGACG+AGG | 0.710130 | 8_2:-27488931 | Msa1242880:intron |
| AAAAGTGGTCTGGATCAAAG+TGG | 0.720897 | 8_2:-27487333 | Msa1242880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTAAGAAATCAT+TGG | - | chr8_2:27489180-27489199 | Msa1242880:intron | 10.0% |
| !!! | GTTATATTGTATAATTTTTT+TGG | - | chr8_2:27489307-27489326 | Msa1242880:CDS | 10.0% |
| !!! | TGAAAATGTTTTTAAATAAT+TGG | - | chr8_2:27490645-27490664 | Msa1242880:intron | 10.0% |
| !!! | TTTAATTGATTTAGATATGT+TGG | - | chr8_2:27487252-27487271 | Msa1242880:CDS | 15.0% |
| !!! | TAAAATTTCTTTTTGTTGAT+TGG | - | chr8_2:27488760-27488779 | Msa1242880:CDS | 15.0% |
| !! | ACAAACAAATTTAAACAATA+AGG | + | chr8_2:27489122-27489141 | None:intergenic | 15.0% |
| !!! | TGTTTAAATTTGTTTGTTTT+TGG | - | chr8_2:27489125-27489144 | Msa1242880:intron | 15.0% |
| !!! | TTTTTTTAGCATTGATTTTT+TGG | - | chr8_2:27489544-27489563 | Msa1242880:intron | 15.0% |
| !! | TCAATATTTCAAACAATATA+AGG | + | chr8_2:27490440-27490459 | None:intergenic | 15.0% |
| !! | ATCATTAATCAAATATCAAA+GGG | + | chr8_2:27492831-27492850 | None:intergenic | 15.0% |
| !! | AATCATTAATCAAATATCAA+AGG | + | chr8_2:27492832-27492851 | None:intergenic | 15.0% |
| !!! | TTATTTGTTTTGTTTGATTG+TGG | - | chr8_2:27487463-27487482 | Msa1242880:intron | 20.0% |
| !!! | TAATGATGAAAATTTTGCAT+TGG | - | chr8_2:27487716-27487735 | Msa1242880:intron | 20.0% |
| !! | TATTGTTGATGTTGAAAATT+TGG | - | chr8_2:27487739-27487758 | Msa1242880:intron | 20.0% |
| !!! | TGGTTTATTTTAAAGAGTTA+AGG | - | chr8_2:27487839-27487858 | Msa1242880:intron | 20.0% |
| !! | AACAATGTTTGTGTAAATTT+GGG | - | chr8_2:27487913-27487932 | Msa1242880:intron | 20.0% |
| !!! | TTTTCTATTCAATGATTCTT+TGG | - | chr8_2:27488242-27488261 | Msa1242880:intron | 20.0% |
| !! | TTTCTATTCAATGATTCTTT+GGG | - | chr8_2:27488243-27488262 | Msa1242880:intron | 20.0% |
| !!! | TTGGAATTTGGAAATTTTTT+TGG | - | chr8_2:27488314-27488333 | Msa1242880:intron | 20.0% |
| !!! | GAAGCATTTGAAAAAATATT+TGG | - | chr8_2:27488452-27488471 | Msa1242880:intron | 20.0% |
| !! | GAAAAAATATTTGGTTGATT+TGG | - | chr8_2:27488461-27488480 | Msa1242880:intron | 20.0% |
| !! | TGAAAAAGGATTTATATGTT+TGG | - | chr8_2:27488609-27488628 | Msa1242880:intron | 20.0% |
| !! | GATTTATATGTTTGGAAAAT+TGG | - | chr8_2:27488617-27488636 | Msa1242880:intron | 20.0% |
| !! | AAACATATGGAACTTATTAT+TGG | - | chr8_2:27488686-27488705 | Msa1242880:intron | 20.0% |
| !!! | AAAATTATTTTGGATTTGTG+TGG | - | chr8_2:27488725-27488744 | Msa1242880:intron | 20.0% |
| !! | AATCCATAAACAAAACAAAA+AGG | + | chr8_2:27488811-27488830 | None:intergenic | 20.0% |
| !!! | TTTGTTTTGTTTATGGATTT+AGG | - | chr8_2:27488812-27488831 | Msa1242880:CDS | 20.0% |
| !!! | TTGTTTTGTTTATGGATTTA+GGG | - | chr8_2:27488813-27488832 | Msa1242880:CDS | 20.0% |
| !!! | TTGTATAATTTTTTTGGTAG+TGG | - | chr8_2:27489313-27489332 | Msa1242880:CDS | 20.0% |
| !! | ATTATGGGATAAATATTCTT+TGG | - | chr8_2:27489389-27489408 | Msa1242880:intron | 20.0% |
| !!! | TATTAACTGATATAGTTTGT+TGG | - | chr8_2:27490054-27490073 | Msa1242880:intron | 20.0% |
| !!! | TTTTTTTTCCTTCAGATATA+AGG | - | chr8_2:27490970-27490989 | Msa1242880:intron | 20.0% |
| !! | AGTAAATTGTCTAAATGTTT+GGG | + | chr8_2:27491235-27491254 | None:intergenic | 20.0% |
| !! | AAGTAAATTGTCTAAATGTT+TGG | + | chr8_2:27491236-27491255 | None:intergenic | 20.0% |
| !! | AAACATTTAGACAATTTACT+TGG | - | chr8_2:27491235-27491254 | Msa1242880:intron | 20.0% |
| !!! | TGTTTTTAGTTAATAGTTCA+CGG | - | chr8_2:27491840-27491859 | Msa1242880:intron | 20.0% |
| !! | ATTAGTATGATTTATTGAAG+TGG | - | chr8_2:27491888-27491907 | Msa1242880:intron | 20.0% |
| !! | CGCAATTAAAATAAAAACAA+AGG | + | chr8_2:27492088-27492107 | None:intergenic | 20.0% |
| !!! | TTTTAACATTACTTTTGTGT+CGG | + | chr8_2:27492414-27492433 | None:intergenic | 20.0% |
| !! | ATGTTAAAATTACTTAAAGC+TGG | - | chr8_2:27492425-27492444 | Msa1242880:intron | 20.0% |
| !! | TGTTAAAATTACTTAAAGCT+GGG | - | chr8_2:27492426-27492445 | Msa1242880:intron | 20.0% |
| !! | TCATTAATCAAATATCAAAG+GGG | + | chr8_2:27492830-27492849 | None:intergenic | 20.0% |
| !!! | AAATCCGATTTTGATTTATA+CGG | - | chr8_2:27492892-27492911 | Msa1242880:intron | 20.0% |
| ! | TCTGTTTAAAAATTGCTGAT+TGG | - | chr8_2:27487301-27487320 | Msa1242880:CDS | 25.0% |
| !! | CTGTTTAAAAATTGCTGATT+GGG | - | chr8_2:27487302-27487321 | Msa1242880:CDS | 25.0% |
| !!! | GTTTTTTTTTTTTGCATGCA+TGG | - | chr8_2:27487408-27487427 | Msa1242880:intron | 25.0% |
| ! | AGATGATAGAATTAAAACGA+TGG | - | chr8_2:27487557-27487576 | Msa1242880:intron | 25.0% |
| ! | GGAATTGGTATTAAAAATTC+TGG | - | chr8_2:27487600-27487619 | Msa1242880:intron | 25.0% |
| !!! | TTATTTGTTTTGTTTGGTTG+TGG | - | chr8_2:27487625-27487644 | Msa1242880:intron | 25.0% |
| ! | GGTAATATAAATTCTGGTAA+TGG | - | chr8_2:27487677-27487696 | Msa1242880:intron | 25.0% |
| !!! | TGTTTTTGCTCTTTTATTTG+AGG | - | chr8_2:27487779-27487798 | Msa1242880:intron | 25.0% |
| ! | TCAACGAAATAATTTCACTA+TGG | - | chr8_2:27487819-27487838 | Msa1242880:intron | 25.0% |
| ! | GAACAATGTTTGTGTAAATT+TGG | - | chr8_2:27487912-27487931 | Msa1242880:intron | 25.0% |
| !! | TTAGTCATTGCAAAGATTTT+TGG | + | chr8_2:27487949-27487968 | None:intergenic | 25.0% |
| ! | AAAAATCTTTGCAATGACTA+AGG | - | chr8_2:27487948-27487967 | Msa1242880:intron | 25.0% |
| !!! | AAAATTTTCAAGACTACTTC+TGG | + | chr8_2:27488084-27488103 | None:intergenic | 25.0% |
| ! | AATTCTACACAATAGATTAC+AGG | + | chr8_2:27488382-27488401 | None:intergenic | 25.0% |
| ! | GAACTGATCTATATTTATGT+AGG | - | chr8_2:27488548-27488567 | Msa1242880:CDS | 25.0% |
| ! | ATGTTTGGAAAATTGGATTT+AGG | - | chr8_2:27488624-27488643 | Msa1242880:intron | 25.0% |
| ! | TGTTTGGAAAATTGGATTTA+GGG | - | chr8_2:27488625-27488644 | Msa1242880:intron | 25.0% |
| !! | CAAAATAATTTTCCTAACCT+TGG | + | chr8_2:27488717-27488736 | None:intergenic | 25.0% |
| !! | CAAGGTTAGGAAAATTATTT+TGG | - | chr8_2:27488715-27488734 | Msa1242880:intron | 25.0% |
| !!! | TCTCCTTTTTGTTTTGTTTA+TGG | - | chr8_2:27488805-27488824 | Msa1242880:CDS | 25.0% |
| ! | ATTCAGATTTAAGTCCTTTA+AGG | - | chr8_2:27489043-27489062 | Msa1242880:CDS | 25.0% |
| ! | AACTATACCATACAAAACAT+CGG | + | chr8_2:27489093-27489112 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTTTTAAGTGTGA+AGG | - | chr8_2:27489142-27489161 | Msa1242880:intron | 25.0% |
| !!! | GGTTCTTATTTTTCAGATAA+CGG | - | chr8_2:27489565-27489584 | Msa1242880:intron | 25.0% |
| !!! | GTAGATTTGATTTGTTTTCA+AGG | - | chr8_2:27489731-27489750 | Msa1242880:intron | 25.0% |
| !!! | TCAAGGATAGTTTTATGTTT+AGG | - | chr8_2:27489748-27489767 | Msa1242880:intron | 25.0% |
| !! | GCAGTAATTATAGTTTGTAT+CGG | - | chr8_2:27489843-27489862 | Msa1242880:intron | 25.0% |
| !! | CAGTAATTATAGTTTGTATC+GGG | - | chr8_2:27489844-27489863 | Msa1242880:intron | 25.0% |
| !!! | TTGTTTAGTTTTAGCATCTT+TGG | - | chr8_2:27489889-27489908 | Msa1242880:intron | 25.0% |
| ! | ATTTACATACACATAAGTGA+TGG | - | chr8_2:27490009-27490028 | Msa1242880:intron | 25.0% |
| !!! | AAACTTTTAAAAGGGCTAAT+TGG | + | chr8_2:27490285-27490304 | None:intergenic | 25.0% |
| !!! | CATTGAGGAAACTTTTAAAA+GGG | + | chr8_2:27490293-27490312 | None:intergenic | 25.0% |
| !! | TCATTGAGGAAACTTTTAAA+AGG | + | chr8_2:27490294-27490313 | None:intergenic | 25.0% |
| ! | CGAATTTATGAATTTGATTG+AGG | - | chr8_2:27490605-27490624 | Msa1242880:intron | 25.0% |
| ! | TATATAGACAACCTTGTTAA+TGG | + | chr8_2:27490864-27490883 | None:intergenic | 25.0% |
| ! | TATGTAGTAACTTTGTCTAT+AGG | - | chr8_2:27491147-27491166 | Msa1242880:intron | 25.0% |
| !! | AACTTTGTCTATAGGAATTT+TGG | - | chr8_2:27491155-27491174 | Msa1242880:intron | 25.0% |
| !! | AAATGTTTGGGATATATCAT+AGG | + | chr8_2:27491223-27491242 | None:intergenic | 25.0% |
| ! | TTAAACTCTAATGATTGAGT+TGG | + | chr8_2:27491524-27491543 | None:intergenic | 25.0% |
| ! | GTCTTAATATTTGATTCAAG+TGG | - | chr8_2:27491633-27491652 | Msa1242880:intron | 25.0% |
| ! | CGCAATTAAAATCAAAACAA+AGG | + | chr8_2:27491697-27491716 | None:intergenic | 25.0% |
| ! | GTCTTAATATTTGATTCAAG+TGG | - | chr8_2:27491633-27491652 | Msa1242880:intron | 25.0% |
| !!! | TCACGTTTTAATGTTTGATT+TGG | - | chr8_2:27492248-27492267 | Msa1242880:intron | 25.0% |
| ! | TCGATTAGTATGATTTATTG+AGG | - | chr8_2:27491885-27491904 | Msa1242880:intron | 25.0% |
| !!! | AGCAGAAGTATTTCATATAT+AGG | - | chr8_2:27492509-27492528 | Msa1242880:intron | 25.0% |
| ! | AAGTATTTCATATATAGGTC+TGG | - | chr8_2:27492514-27492533 | Msa1242880:intron | 25.0% |
| !!! | TTTTTTTTGCAAAACTCAGA+AGG | - | chr8_2:27492672-27492691 | Msa1242880:intron | 25.0% |
| ! | CAAACCGTATAAATCAAAAT+CGG | + | chr8_2:27492899-27492918 | None:intergenic | 25.0% |
| AAACCAAAGAAAATCCCAAT+CGG | + | chr8_2:27487217-27487236 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTGCATGCATGGA+TGG | - | chr8_2:27487412-27487431 | Msa1242880:intron | 30.0% |
| ! | TGTGTATGATGATGAAACTT+TGG | - | chr8_2:27487488-27487507 | Msa1242880:intron | 30.0% |
| GGAAGTGGTAATATAAATTC+TGG | - | chr8_2:27487509-27487528 | Msa1242880:intron | 30.0% | |
| !!! | CTGGTCTTATTTGTTTTGTT+TGG | - | chr8_2:27487619-27487638 | Msa1242880:intron | 30.0% |
| ! | TGTGTATGATGATGAAACTT+TGG | - | chr8_2:27487488-27487507 | Msa1242880:intron | 30.0% |
| GGAAGTGGTAATATAAATTC+TGG | - | chr8_2:27487509-27487528 | Msa1242880:intron | 30.0% | |
| GTAATGGTATTCATACTGTT+TGG | - | chr8_2:27487693-27487712 | Msa1242880:intron | 30.0% | |
| CAAGTCCAATTATACAATAC+CGG | - | chr8_2:27488035-27488054 | Msa1242880:intron | 30.0% | |
| ! | AATTATACAATACCGGTTGT+GGG | - | chr8_2:27488042-27488061 | Msa1242880:intron | 30.0% |
| ! | AATGTGCATTGATACTATGA+CGG | + | chr8_2:27488224-27488243 | None:intergenic | 30.0% |
| ! | TTAGTTATTCAGCTGAGTTT+TGG | - | chr8_2:27488295-27488314 | Msa1242880:intron | 30.0% |
| ! | ATTGTGTAGAATTCCTTTTC+TGG | - | chr8_2:27488389-27488408 | Msa1242880:intron | 30.0% |
| CTGTATCAAGGATTTGAAAA+AGG | - | chr8_2:27488595-27488614 | Msa1242880:intron | 30.0% | |
| ! | CATATGTTTGTTACCATTAC+TGG | + | chr8_2:27488675-27488694 | None:intergenic | 30.0% |
| CAGTAATGGTAACAAACATA+TGG | - | chr8_2:27488673-27488692 | Msa1242880:intron | 30.0% | |
| !!! | ATTATTTTGGATTTGTGTGG+TGG | - | chr8_2:27488728-27488747 | Msa1242880:intron | 30.0% |
| TTAAATCTGAATTCATGGGA+GGG | + | chr8_2:27489035-27489054 | None:intergenic | 30.0% | |
| GGACTTAAATCTGAATTCAT+GGG | + | chr8_2:27489039-27489058 | None:intergenic | 30.0% | |
| AGGACTTAAATCTGAATTCA+TGG | + | chr8_2:27489040-27489059 | None:intergenic | 30.0% | |
| ! | TCCTTTAAGGAAATTGAAGA+TGG | - | chr8_2:27489056-27489075 | Msa1242880:CDS | 30.0% |
| TCCATCTTCAATTTCCTTAA+AGG | + | chr8_2:27489060-27489079 | None:intergenic | 30.0% | |
| ACTATACCATACAAAACATC+GGG | + | chr8_2:27489092-27489111 | None:intergenic | 30.0% | |
| TTCATCTTTAAGCACAAGAT+TGG | + | chr8_2:27489262-27489281 | None:intergenic | 30.0% | |
| TGAGTTAATATCAAGACAAC+AGG | + | chr8_2:27489453-27489472 | None:intergenic | 30.0% | |
| GTCCAATTGTTACAAACATT+CGG | + | chr8_2:27489595-27489614 | None:intergenic | 30.0% | |
| AATGTTTGTAACAATTGGAC+TGG | - | chr8_2:27489595-27489614 | Msa1242880:intron | 30.0% | |
| TTAAGCATCCAATTGTTGAT+AGG | - | chr8_2:27489638-27489657 | Msa1242880:intron | 30.0% | |
| ! | TCCAATTGTTGATAGGTTTA+AGG | - | chr8_2:27489645-27489664 | Msa1242880:intron | 30.0% |
| ACTATTTATGCAACTACGTA+AGG | + | chr8_2:27489937-27489956 | None:intergenic | 30.0% | |
| ! | TGGTAGAGTCATGATTATTT+TGG | - | chr8_2:27490074-27490093 | Msa1242880:intron | 30.0% |
| GTAAACTATAATGATGCCAT+TGG | - | chr8_2:27490115-27490134 | Msa1242880:intron | 30.0% | |
| TAAAAAGAGCAGAATTTCAC+AGG | - | chr8_2:27490159-27490178 | Msa1242880:intron | 30.0% | |
| AAAATGATTGTACACAACCA+TGG | + | chr8_2:27490394-27490413 | None:intergenic | 30.0% | |
| ! | TTCGAGAATTCATCATTTTG+CGG | + | chr8_2:27490561-27490580 | None:intergenic | 30.0% |
| AAATTCATAAATTCGCCGAT+TGG | + | chr8_2:27490600-27490619 | None:intergenic | 30.0% | |
| AACACATATTGCATTACTGT+TGG | - | chr8_2:27490714-27490733 | Msa1242880:intron | 30.0% | |
| AAGTTTAATCCTAATCAGAG+TGG | - | chr8_2:27490747-27490766 | Msa1242880:intron | 30.0% | |
| ATGTTGAAGTTCCATTAACA+AGG | - | chr8_2:27490850-27490869 | Msa1242880:intron | 30.0% | |
| !!! | TGTGATTAGTTGATAGCTTT+TGG | - | chr8_2:27490892-27490911 | Msa1242880:intron | 30.0% |
| !!! | TTAGTTGATAGCTTTTGGTT+TGG | - | chr8_2:27490897-27490916 | Msa1242880:intron | 30.0% |
| ! | TTTTTCCTTCAGATATAAGG+TGG | - | chr8_2:27490973-27490992 | Msa1242880:intron | 30.0% |
| ! | TGTGTATGATGGTGATAAAT+CGG | - | chr8_2:27491006-27491025 | Msa1242880:intron | 30.0% |
| ! | ATAAATCGGACTTTGTGTTT+TGG | - | chr8_2:27491020-27491039 | Msa1242880:intron | 30.0% |
| ! | TAAATCGGACTTTGTGTTTT+GGG | - | chr8_2:27491021-27491040 | Msa1242880:intron | 30.0% |
| AATCAAATTTACCTCTTGCA+TGG | + | chr8_2:27491098-27491117 | None:intergenic | 30.0% | |
| ATAATTGTGTTTGTTCCTGA+AGG | - | chr8_2:27491183-27491202 | Msa1242880:intron | 30.0% | |
| TATTTGATTCAAGTGGTAGT+AGG | - | chr8_2:27491640-27491659 | Msa1242880:intron | 30.0% | |
| TCACGGTTTAATGTTTCATT+TGG | - | chr8_2:27491857-27491876 | Msa1242880:intron | 30.0% | |
| TATTTGATTCAAGTGGTAGT+AGG | - | chr8_2:27491640-27491659 | Msa1242880:intron | 30.0% | |
| GGTGATAAGTTATGATAGAT+TGG | - | chr8_2:27492297-27492316 | Msa1242880:intron | 30.0% | |
| !! | TTATGATAGATTGGTTTCCT+TGG | - | chr8_2:27492306-27492325 | Msa1242880:intron | 30.0% |
| TTTCATATATAGGTCTGGTA+AGG | - | chr8_2:27492519-27492538 | Msa1242880:intron | 30.0% | |
| CTAATCAAGTTAAACCCAAA+AGG | - | chr8_2:27492576-27492595 | Msa1242880:intron | 30.0% | |
| AAAGGTTGTGACTCATATAT+AGG | - | chr8_2:27492729-27492748 | Msa1242880:intron | 30.0% | |
| ACTGATAAGGAAATTGTTTG+TGG | - | chr8_2:27492794-27492813 | Msa1242880:intron | 30.0% | |
| !!! | GGATGTTGATTTTGTTGAGT+TGG | - | chr8_2:27487433-27487452 | Msa1242880:intron | 35.0% |
| !!! | TTGATTTTGTTGAGTTGGTG+TGG | - | chr8_2:27487438-27487457 | Msa1242880:intron | 35.0% |
| ! | TGATGATGAAACTTTGGAAG+TGG | - | chr8_2:27487494-27487513 | Msa1242880:intron | 35.0% |
| ! | AAACGATGGAACATTGATTG+TGG | - | chr8_2:27487571-27487590 | Msa1242880:intron | 35.0% |
| ! | TGATGATGAAACTTTGGAAG+TGG | - | chr8_2:27487494-27487513 | Msa1242880:intron | 35.0% |
| AGAGTTAAGGTTCAGATGTT+TGG | - | chr8_2:27487852-27487871 | Msa1242880:intron | 35.0% | |
| GAGTTAAGGTTCAGATGTTT+GGG | - | chr8_2:27487853-27487872 | Msa1242880:intron | 35.0% | |
| CACAACCGGTATTGTATAAT+TGG | + | chr8_2:27488043-27488062 | None:intergenic | 35.0% | |
| ! | CAATTATACAATACCGGTTG+TGG | - | chr8_2:27488041-27488060 | Msa1242880:intron | 35.0% |
| ! | ATTATACAATACCGGTTGTG+GGG | - | chr8_2:27488043-27488062 | Msa1242880:intron | 35.0% |
| TTTGTCAATGCTGTTATTGC+TGG | - | chr8_2:27488126-27488145 | Msa1242880:intron | 35.0% | |
| CTATTCAATGATTCTTTGGG+AGG | - | chr8_2:27488246-27488265 | Msa1242880:intron | 35.0% | |
| GAATAACTAAGAGTCTTGCT+CGG | + | chr8_2:27488285-27488304 | None:intergenic | 35.0% | |
| !!! | TTCAGCTGAGTTTTGGAATT+TGG | - | chr8_2:27488302-27488321 | Msa1242880:intron | 35.0% |
| CATTGATGCTATACCAGAAA+AGG | + | chr8_2:27488405-27488424 | None:intergenic | 35.0% | |
| !! | ATTTGGTTGATTTGGTTACG+TGG | - | chr8_2:27488469-27488488 | Msa1242880:intron | 35.0% |
| !!! | TTGGTTACGTGGTTTTGTTA+AGG | - | chr8_2:27488480-27488499 | Msa1242880:intron | 35.0% |
| ATGTAGGTTTCACAATGTCT+AGG | - | chr8_2:27488564-27488583 | Msa1242880:CDS | 35.0% | |
| TGTAGGTTTCACAATGTCTA+GGG | - | chr8_2:27488565-27488584 | Msa1242880:CDS | 35.0% | |
| ACTTATTATTGGAGATGCCA+AGG | - | chr8_2:27488697-27488716 | Msa1242880:intron | 35.0% | |
| TCAATGACTTCAAATGCTCA+AGG | + | chr8_2:27488872-27488891 | None:intergenic | 35.0% | |
| CTTAAATCTGAATTCATGGG+AGG | + | chr8_2:27489036-27489055 | None:intergenic | 35.0% | |
| TTAAGCACAAGATTGGTACA+CGG | + | chr8_2:27489255-27489274 | None:intergenic | 35.0% | |
| AGCCGAATGTTTGTAACAAT+TGG | - | chr8_2:27489590-27489609 | Msa1242880:intron | 35.0% | |
| GCCTTAAACCTATCAACAAT+TGG | + | chr8_2:27489649-27489668 | None:intergenic | 35.0% | |
| ! | TTGTTGATAGGTTTAAGGCT+AGG | - | chr8_2:27489650-27489669 | Msa1242880:intron | 35.0% |
| ATCTTTGGCAGACTTAAGAT+AGG | - | chr8_2:27489904-27489923 | Msa1242880:intron | 35.0% | |
| ! | AATTTCACAGGATGATGATG+CGG | - | chr8_2:27490171-27490190 | Msa1242880:intron | 35.0% |
| GAAGAATTGAGTGATCATTG+AGG | + | chr8_2:27490308-27490327 | None:intergenic | 35.0% | |
| CTGACATCAAACGTTATGTA+TGG | - | chr8_2:27490327-27490346 | Msa1242880:intron | 35.0% | |
| TTTAGACACTTAACCAACCA+TGG | - | chr8_2:27490374-27490393 | Msa1242880:intron | 35.0% | |
| AAGGAATGTCTTCAGATTCT+TGG | - | chr8_2:27491046-27491065 | Msa1242880:intron | 35.0% | |
| !! | CAATTTACTTGGTCTTGAGT+TGG | - | chr8_2:27491246-27491265 | Msa1242880:intron | 35.0% |
| TTAATTCTCTGAATCACAGC+AGG | + | chr8_2:27491334-27491353 | None:intergenic | 35.0% | |
| TGTTAACATACCTCAGAAAC+TGG | + | chr8_2:27491807-27491826 | None:intergenic | 35.0% | |
| TATAGGTCTGGTAAGGAAAT+TGG | - | chr8_2:27492526-27492545 | Msa1242880:intron | 35.0% | |
| TTGTGACTCATATATAGGTC+TGG | - | chr8_2:27492734-27492753 | Msa1242880:intron | 35.0% | |
| ! | TTTTTCGCTCTTGTGTTAAC+AGG | - | chr8_2:27492939-27492958 | Msa1242880:intron | 35.0% |
| ! | TTTTCGCTCTTGTGTTAACA+GGG | - | chr8_2:27492940-27492959 | Msa1242880:intron | 35.0% |
| TTAACGGAAGATAACTGTGT+TGG | + | chr8_2:27493087-27493106 | None:intergenic | 35.0% | |
| ACAGTTATCTTCCGTTAAGT+TGG | - | chr8_2:27493089-27493108 | Msa1242880:intron | 35.0% | |
| AGTGCATTTAGCCAACTTAA+CGG | + | chr8_2:27493103-27493122 | None:intergenic | 35.0% | |
| ! | TAGCCGATTGGGATTTTCTT+TGG | - | chr8_2:27487211-27487230 | Msa1242880:CDS | 40.0% |
| CAAACAACAGTACGCATACA+TGG | + | chr8_2:27487380-27487399 | None:intergenic | 40.0% | |
| CATGTATGCGTACTGTTGTT+TGG | - | chr8_2:27487378-27487397 | Msa1242880:intron | 40.0% | |
| ! | GAACATTGATTGTGGTGACT+TGG | - | chr8_2:27487579-27487598 | Msa1242880:intron | 40.0% |
| ! | TGATTGTGGTGACTTGGAAT+TGG | - | chr8_2:27487585-27487604 | Msa1242880:intron | 40.0% |
| GTACCAAACAGAGTGAATCT+GGG | + | chr8_2:27487887-27487906 | None:intergenic | 40.0% | |
| TGTACCAAACAGAGTGAATC+TGG | + | chr8_2:27487888-27487907 | None:intergenic | 40.0% | |
| ATTGCACGAATGACATGTTC+AGG | - | chr8_2:27488177-27488196 | Msa1242880:CDS | 40.0% | |
| TAGGGACTATGACTGTATCA+AGG | - | chr8_2:27488583-27488602 | Msa1242880:CDS | 40.0% | |
| ! | GATTTAGGGTTCTTGACTCA+TGG | - | chr8_2:27488639-27488658 | Msa1242880:intron | 40.0% |
| TTATTGGAGATGCCAAGGTT+AGG | - | chr8_2:27488702-27488721 | Msa1242880:intron | 40.0% | |
| ATCGCATTCATGCCATAACT+CGG | - | chr8_2:27488838-27488857 | Msa1242880:intron | 40.0% | |
| GCATGTTGATCATCCGTTTA+AGG | - | chr8_2:27488956-27488975 | Msa1242880:CDS | 40.0% | |
| TGTTGATCATCCGTTTAAGG+TGG | - | chr8_2:27488959-27488978 | Msa1242880:CDS | 40.0% | |
| AAGCCAAACACCACCTTAAA+CGG | + | chr8_2:27488972-27488991 | None:intergenic | 40.0% | |
| ! | TTTAAGGTGGTGTTTGGCTT+TGG | - | chr8_2:27488972-27488991 | Msa1242880:CDS | 40.0% |
| ! | TTCAAGCCCGATGTTTTGTA+TGG | - | chr8_2:27489083-27489102 | Msa1242880:CDS | 40.0% |
| TCATGAGATCGTAAAGACGT+CGG | - | chr8_2:27489209-27489228 | Msa1242880:intron | 40.0% | |
| CTTGCTGAACGAAAGAATAC+AGG | - | chr8_2:27489426-27489445 | Msa1242880:intron | 40.0% | |
| !! | TAGTTTGTATCGGGCTGTTT+TGG | - | chr8_2:27489853-27489872 | Msa1242880:intron | 40.0% |
| AACACTCTGATATAGAGTCG+AGG | + | chr8_2:27489982-27490001 | None:intergenic | 40.0% | |
| ACATACACATAAGTGATGGC+TGG | - | chr8_2:27490013-27490032 | Msa1242880:intron | 40.0% | |
| ATGATGCCATTGGATCACTT+TGG | - | chr8_2:27490125-27490144 | Msa1242880:intron | 40.0% | |
| ATGCAACCAAAGTGATCCAA+TGG | + | chr8_2:27490134-27490153 | None:intergenic | 40.0% | |
| ! | CTGACTTGATCAAGATTGTG+CGG | - | chr8_2:27490246-27490265 | Msa1242880:intron | 40.0% |
| TGATTGTACACAACCATGGT+TGG | + | chr8_2:27490390-27490409 | None:intergenic | 40.0% | |
| ! | TTTTGCAGTCTTCAAGCTCA+TGG | - | chr8_2:27490486-27490505 | Msa1242880:intron | 40.0% |
| CTTACTCAGACTTTGTGTCA+AGG | - | chr8_2:27490516-27490535 | Msa1242880:intron | 40.0% | |
| ! | AAGGTTCAAGTTCTTCTCAG+AGG | - | chr8_2:27490535-27490554 | Msa1242880:intron | 40.0% |
| CTGTCTCAAGTTAAGCCAAT+CGG | - | chr8_2:27490582-27490601 | Msa1242880:intron | 40.0% | |
| TTAATCCTAATCAGAGTGGC+TGG | - | chr8_2:27490751-27490770 | Msa1242880:intron | 40.0% | |
| TAATACCAGCCACTCTGATT+AGG | + | chr8_2:27490759-27490778 | None:intergenic | 40.0% | |
| CTATAAATGCACATGTGGAG+AGG | - | chr8_2:27490827-27490846 | Msa1242880:intron | 40.0% | |
| CACAACCACCTTATATCTGA+AGG | + | chr8_2:27490981-27491000 | None:intergenic | 40.0% | |
| GTTGTGCAAGTTGTGTATGA+TGG | - | chr8_2:27490995-27491014 | Msa1242880:intron | 40.0% | |
| TCTTAGAAAGACCATGCAAG+AGG | - | chr8_2:27491084-27491103 | Msa1242880:intron | 40.0% | |
| TTGTGTTTGTTCCTGAAGGT+TGG | - | chr8_2:27491187-27491206 | Msa1242880:intron | 40.0% | |
| ACAGATGACTGACGATAATG+TGG | + | chr8_2:27491292-27491311 | None:intergenic | 40.0% | |
| AGATGTACAAGAAGTTGACG+AGG | - | chr8_2:27491384-27491403 | Msa1242880:intron | 40.0% | |
| AAAAGTAACTCCAGTTGCTG+TGG | - | chr8_2:27491571-27491590 | Msa1242880:intron | 40.0% | |
| ATAAACCATACCACAGCAAC+TGG | + | chr8_2:27491584-27491603 | None:intergenic | 40.0% | |
| GCGTTGTGCTAGAATATTGT+CGG | - | chr8_2:27491714-27491733 | Msa1242880:intron | 40.0% | |
| CAAATCAGTTCCAGTTTCTG+AGG | - | chr8_2:27491794-27491813 | Msa1242880:intron | 40.0% | |
| AAAAGTAACTCCAGTTGCTG+TGG | - | chr8_2:27491571-27491590 | Msa1242880:intron | 40.0% | |
| ATAAACCATACCACAGCAAC+TGG | + | chr8_2:27491584-27491603 | None:intergenic | 40.0% | |
| GCGTTGTGCTAGAATATTGT+CGG | - | chr8_2:27491714-27491733 | Msa1242880:intron | 40.0% | |
| TTCCACATGAGGTCCTAATT+GGG | - | chr8_2:27492476-27492495 | Msa1242880:intron | 40.0% | |
| GCTATGATATCACCCCAATT+AGG | + | chr8_2:27492492-27492511 | None:intergenic | 40.0% | |
| AAGTTAAACCCAAAAGGCAG+TGG | - | chr8_2:27492582-27492601 | Msa1242880:intron | 40.0% | |
| AGTTAAACCCAAAAGGCAGT+GGG | - | chr8_2:27492583-27492602 | Msa1242880:intron | 40.0% | |
| ACTTCTGCTCAATGTCTGAA+AGG | - | chr8_2:27492711-27492730 | Msa1242880:intron | 40.0% | |
| ! | ATATAGGTCTGGCTTCTGAA+AGG | - | chr8_2:27492745-27492764 | Msa1242880:intron | 40.0% |
| ! | GGCTTCTGAAAGGTTTAACT+TGG | - | chr8_2:27492755-27492774 | Msa1242880:intron | 40.0% |
| GTACTCACATGTGACTGATA+AGG | - | chr8_2:27492781-27492800 | Msa1242880:intron | 40.0% | |
| TTTCGCTCTTGTGTTAACAG+GGG | - | chr8_2:27492941-27492960 | Msa1242880:intron | 40.0% | |
| AAAAGTGGTCTGGATCAAAG+TGG | - | chr8_2:27492982-27493001 | Msa1242880:intron | 40.0% | |
| ACAACAGTACGCATACATGG+AGG | + | chr8_2:27487377-27487396 | None:intergenic | 45.0% | |
| TGACCCAGATTCACTCTGTT+TGG | - | chr8_2:27487881-27487900 | Msa1242880:intron | 45.0% | |
| TGGATTGTCACTGCCAGTAA+TGG | - | chr8_2:27488659-27488678 | Msa1242880:intron | 45.0% | |
| AAGGTCTCTGTTCCGAGTTA+TGG | + | chr8_2:27488853-27488872 | None:intergenic | 45.0% | |
| ! | CATCCGTTTAAGGTGGTGTT+TGG | - | chr8_2:27488966-27488985 | Msa1242880:CDS | 45.0% |
| ! | ATCGTAAAGACGTCGGTGTT+TGG | - | chr8_2:27489216-27489235 | Msa1242880:intron | 45.0% |
| GTGTCTGAGAATGTTGTTGC+TGG | - | chr8_2:27489340-27489359 | Msa1242880:intron | 45.0% | |
| GAATGTTGTTGCTGGTGTAG+TGG | - | chr8_2:27489348-27489367 | Msa1242880:intron | 45.0% | |
| ACCTGCTTGATGCGACATTA+TGG | - | chr8_2:27489373-27489392 | Msa1242880:intron | 45.0% | |
| CCTGCTTGATGCGACATTAT+GGG | - | chr8_2:27489374-27489393 | Msa1242880:intron | 45.0% | |
| CATGCACAGTGTAAACTTGC+TGG | - | chr8_2:27489471-27489490 | Msa1242880:intron | 45.0% | |
| GCAACACACAACTATGCATC+TGG | + | chr8_2:27489801-27489820 | None:intergenic | 45.0% | |
| ! | GTGTTGCTGATCTGTAGCTT+TGG | - | chr8_2:27489814-27489833 | Msa1242880:intron | 45.0% |
| !! | CCTTGAAGGCTTTGGACATT+TGG | + | chr8_2:27490793-27490812 | None:intergenic | 45.0% |
| CCAAATGTCCAAAGCCTTCA+AGG | - | chr8_2:27490790-27490809 | Msa1242880:intron | 45.0% | |
| CCATTTGACCTTGAAGGCTT+TGG | + | chr8_2:27490801-27490820 | None:intergenic | 45.0% | |
| CCAAAGCCTTCAAGGTCAAA+TGG | - | chr8_2:27490798-27490817 | Msa1242880:intron | 45.0% | |
| GCTGGCTATAAATGCACATG+TGG | - | chr8_2:27490822-27490841 | Msa1242880:intron | 45.0% | |
| !!! | GGACTTTGTGTTTTGGGACA+AGG | - | chr8_2:27491027-27491046 | Msa1242880:intron | 45.0% |
| GATCATCTTCACCAACCTTC+AGG | + | chr8_2:27491201-27491220 | None:intergenic | 45.0% | |
| TATCGTCAGTCATCTGTGCA+AGG | - | chr8_2:27491295-27491314 | Msa1242880:intron | 45.0% | |
| ACTGCATACCATCAGGATGA+AGG | + | chr8_2:27491363-27491382 | None:intergenic | 45.0% | |
| ACATCTGACTGCATACCATC+AGG | + | chr8_2:27491370-27491389 | None:intergenic | 45.0% | |
| TAACTCCAGTTGCTGTGGTA+TGG | - | chr8_2:27491576-27491595 | Msa1242880:intron | 45.0% | |
| TAACTCCAGTTGCTGTGGTA+TGG | - | chr8_2:27491576-27491595 | Msa1242880:intron | 45.0% | |
| ! | CTGACTGATTCAAAGTGCCA+AGG | + | chr8_2:27492326-27492345 | None:intergenic | 45.0% |
| TGGCACTTTGAATCAGTCAG+AGG | - | chr8_2:27492326-27492345 | Msa1242880:intron | 45.0% | |
| ATGAAACCTTTACCCAGTGC+AGG | - | chr8_2:27492450-27492469 | Msa1242880:intron | 45.0% | |
| CTTCCACATGAGGTCCTAAT+TGG | - | chr8_2:27492475-27492494 | Msa1242880:intron | 45.0% | |
| TCCACATGAGGTCCTAATTG+GGG | - | chr8_2:27492477-27492496 | Msa1242880:intron | 45.0% | |
| GTCTGGTAAGGAAATTGGTC+TGG | - | chr8_2:27492531-27492550 | Msa1242880:intron | 45.0% | |
| TTGCAAAACTCAGAAGGCAG+AGG | - | chr8_2:27492678-27492697 | Msa1242880:intron | 45.0% | |
| TGCAAAACTCAGAAGGCAGA+GGG | - | chr8_2:27492679-27492698 | Msa1242880:intron | 45.0% | |
| GTTTCTGTGAGTGGGAAAAG+TGG | - | chr8_2:27492967-27492986 | Msa1242880:intron | 45.0% | |
| TCAGCAAATGAACGTCTTGC+AGG | + | chr8_2:27493027-27493046 | None:intergenic | 45.0% | |
| ! | GTTGGCTAAATGCACTGACA+AGG | - | chr8_2:27493107-27493126 | Msa1242880:intron | 45.0% |
| CCATTTCTGATCCCCACAAC+CGG | + | chr8_2:27488057-27488076 | None:intergenic | 50.0% | |
| CGGTTGTGGGGATCAGAAAT+GGG | - | chr8_2:27488055-27488074 | Msa1242880:intron | 50.0% | |
| !! | GGTGTTTGGCTTTGGTACGA+AGG | - | chr8_2:27488980-27488999 | Msa1242880:CDS | 50.0% |
| ! | AAGACGTCGGTGTTTGGATC+TGG | - | chr8_2:27489222-27489241 | Msa1242880:intron | 50.0% |
| CCCATAATGTCGCATCAAGC+AGG | + | chr8_2:27489377-27489396 | None:intergenic | 50.0% | |
| GACATCAACCTAGCAGCAAC+AGG | + | chr8_2:27489779-27489798 | None:intergenic | 50.0% | |
| CCAGCACCATTTGACCTTGA+AGG | + | chr8_2:27490807-27490826 | None:intergenic | 50.0% | |
| CCTTCAAGGTCAAATGGTGC+TGG | - | chr8_2:27490804-27490823 | Msa1242880:intron | 50.0% | |
| AAGCGTCACCTTCATCCTGA+TGG | - | chr8_2:27491352-27491371 | Msa1242880:intron | 50.0% | |
| ! | GAAGTACCTGCACTGGGTAA+AGG | + | chr8_2:27492459-27492478 | None:intergenic | 50.0% |
| !! | CATGTGGAAGTACCTGCACT+GGG | + | chr8_2:27492465-27492484 | None:intergenic | 50.0% |
| !! | TCATGTGGAAGTACCTGCAC+TGG | + | chr8_2:27492466-27492485 | None:intergenic | 50.0% |
| AGTGCAGGTACTTCCACATG+AGG | - | chr8_2:27492465-27492484 | Msa1242880:intron | 50.0% | |
| ACCCCAATTAGGACCTCATG+TGG | + | chr8_2:27492481-27492500 | None:intergenic | 50.0% | |
| ! | TTCCAGACCCACTGCCTTTT+GGG | + | chr8_2:27492593-27492612 | None:intergenic | 50.0% |
| ! | TTTCCAGACCCACTGCCTTT+TGG | + | chr8_2:27492594-27492613 | None:intergenic | 50.0% |
| !! | AGGGGTCTGTTTCTGTGAGT+GGG | - | chr8_2:27492959-27492978 | Msa1242880:intron | 50.0% |
| TGTGAGTGGGAAAAGTGGTC+TGG | - | chr8_2:27492972-27492991 | Msa1242880:intron | 50.0% | |
| GTGGTCTGGATCAAAGTGGT+AGG | - | chr8_2:27492986-27493005 | Msa1242880:intron | 50.0% | |
| CCGGTTGTGGGGATCAGAAA+TGG | - | chr8_2:27488054-27488073 | Msa1242880:intron | 55.0% | |
| GCTTTGGTACGAAGGTGACG+AGG | - | chr8_2:27488988-27489007 | Msa1242880:CDS | 55.0% | |
| AGGTGTGTCCTGTTGCTGCT+AGG | - | chr8_2:27489768-27489787 | Msa1242880:intron | 55.0% | |
| AACCCAAAAGGCAGTGGGTC+TGG | - | chr8_2:27492588-27492607 | Msa1242880:intron | 55.0% | |
| !! | CAGGGGTCTGTTTCTGTGAG+TGG | - | chr8_2:27492958-27492977 | Msa1242880:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 27487203 | 27493134 | 27487203 | ID=Msa1242880;Name=Msa1242880 |
| chr8_2 | mRNA | 27487203 | 27493134 | 27487203 | ID=Msa1242880-mRNA-1;Parent=Msa1242880;Name=Msa1242880-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.14|0|0.62|1|1|8|0|256 |
| chr8_2 | exon | 27493129 | 27493134 | 27493129 | ID=Msa1242880-mRNA-1:exon:9720;Parent=Msa1242880-mRNA-1 |
| chr8_2 | exon | 27489232 | 27489345 | 27489232 | ID=Msa1242880-mRNA-1:exon:9719;Parent=Msa1242880-mRNA-1 |
| chr8_2 | exon | 27488932 | 27489132 | 27488932 | ID=Msa1242880-mRNA-1:exon:9718;Parent=Msa1242880-mRNA-1 |
| chr8_2 | exon | 27488745 | 27488834 | 27488745 | ID=Msa1242880-mRNA-1:exon:9717;Parent=Msa1242880-mRNA-1 |
| chr8_2 | exon | 27488522 | 27488611 | 27488522 | ID=Msa1242880-mRNA-1:exon:9716;Parent=Msa1242880-mRNA-1 |
| chr8_2 | exon | 27488476 | 27488481 | 27488476 | ID=Msa1242880-mRNA-1:exon:9715;Parent=Msa1242880-mRNA-1 |
| chr8_2 | exon | 27488131 | 27488220 | 27488131 | ID=Msa1242880-mRNA-1:exon:9714;Parent=Msa1242880-mRNA-1 |
| chr8_2 | exon | 27487203 | 27487376 | 27487203 | ID=Msa1242880-mRNA-1:exon:9713;Parent=Msa1242880-mRNA-1 |
| chr8_2 | CDS | 27493129 | 27493134 | 27493129 | ID=Msa1242880-mRNA-1:cds;Parent=Msa1242880-mRNA-1 |
| chr8_2 | CDS | 27489232 | 27489345 | 27489232 | ID=Msa1242880-mRNA-1:cds;Parent=Msa1242880-mRNA-1 |
| chr8_2 | CDS | 27488932 | 27489132 | 27488932 | ID=Msa1242880-mRNA-1:cds;Parent=Msa1242880-mRNA-1 |
| chr8_2 | CDS | 27488745 | 27488834 | 27488745 | ID=Msa1242880-mRNA-1:cds;Parent=Msa1242880-mRNA-1 |
| chr8_2 | CDS | 27488522 | 27488611 | 27488522 | ID=Msa1242880-mRNA-1:cds;Parent=Msa1242880-mRNA-1 |
| chr8_2 | CDS | 27488476 | 27488481 | 27488476 | ID=Msa1242880-mRNA-1:cds;Parent=Msa1242880-mRNA-1 |
| chr8_2 | CDS | 27488131 | 27488220 | 27488131 | ID=Msa1242880-mRNA-1:cds;Parent=Msa1242880-mRNA-1 |
| chr8_2 | CDS | 27487203 | 27487376 | 27487203 | ID=Msa1242880-mRNA-1:cds;Parent=Msa1242880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
