AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1247590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1247590 MtrunA17_Chr4g0025351 55.464 485 179 9 1 454 1 479 4.67e-174 496
Msa1247590 MtrunA17_Chr8g0360071 57.082 466 167 9 12 453 4 460 2.06e-173 494
Msa1247590 MtrunA17_Chr8g0362591 56.332 458 168 8 21 454 7 456 2.57e-170 486
Msa1247590 MtrunA17_Chr8g0369261 59.130 460 161 11 1 454 1 439 1.09e-168 481
Msa1247590 MtrunA17_Chr8g0363821 54.072 442 179 8 21 453 23 449 2.75e-151 437
Msa1247590 MtrunA17_Chr8g0363981 53.103 435 177 7 21 454 25 433 3.19e-145 421
Msa1247590 MtrunA17_Chr8g0363971 47.904 501 193 15 1 453 1 481 7.24e-132 389
Msa1247590 MtrunA17_Chr2g0319941 43.249 474 227 16 1 449 1 457 1.27e-100 308
Msa1247590 MtrunA17_Chr8g0363791 55.596 277 103 4 186 453 1 266 6.17e-95 287
Msa1247590 MtrunA17_Chr8g0362491 41.004 478 238 17 1 449 1 463 1.76e-92 287
Msa1247590 MtrunA17_Chr5g0444311 40.343 466 241 10 9 448 7 461 8.92e-88 275
Msa1247590 MtrunA17_Chr8g0360061 40.787 483 235 16 7 449 6 477 1.12e-86 273
Msa1247590 MtrunA17_Chr8g0362021 40.803 473 230 14 10 454 8 458 6.83e-84 265
Msa1247590 MtrunA17_Chr8g0362521 40.625 448 236 12 19 447 13 449 1.55e-79 253
Msa1247590 MtrunA17_Chr8g0362461 40.347 461 207 16 12 448 2 418 7.72e-78 248
Msa1247590 MtrunA17_Chr8g0362001 51.971 279 117 8 21 289 84 355 1.80e-75 240
Msa1247590 MtrunA17_Chr8g0358771 44.886 352 169 14 112 449 11 351 4.30e-74 236
Msa1247590 MtrunA17_Chr2g0321161 73.973 146 38 0 309 454 15 160 1.66e-67 213
Msa1247590 MtrunA17_Chr8g0373051 36.927 436 201 14 21 449 10 378 3.02e-62 206
Msa1247590 MtrunA17_Chr8g0340591 44.195 267 118 10 199 449 17 268 1.26e-52 178
Msa1247590 MtrunA17_Chr4g0011341 41.026 312 135 13 165 449 18 307 6.82e-51 174
Msa1247590 MtrunA17_Chr8g0363801 55.556 144 60 2 21 164 9 148 2.74e-44 152
Msa1247590 MtrunA17_Chr8g0363951 38.628 277 141 10 189 448 1 265 3.10e-43 153
Msa1247590 MtrunA17_Chr5g0405101 50.000 160 72 5 7 164 9 162 9.41e-37 133
Msa1247590 MtrunA17_Chr4g0014361 34.700 317 167 10 164 448 3 311 1.68e-36 136
Msa1247590 MtrunA17_Chr4g0011381 41.245 257 106 11 199 432 4 238 2.81e-35 131
Msa1247590 MtrunA17_Chr1g0166251 30.317 442 229 18 21 449 11 386 3.08e-33 129
Msa1247590 MtrunA17_Chr5g0396411 29.241 448 245 18 23 449 1 397 2.45e-32 127
Msa1247590 MtrunA17_Chr8g0363941 46.622 148 72 3 21 164 16 160 2.95e-32 121
Msa1247590 MtrunA17_Chr4g0014371 44.654 159 81 4 11 164 2 158 6.31e-32 119
Msa1247590 MtrunA17_Chr8g0340611 46.053 152 74 4 21 165 10 160 2.13e-31 118
Msa1247590 MtrunA17_Chr7g0262091 29.060 468 236 17 1 449 1 391 3.67e-31 123
Msa1247590 MtrunA17_Chr8g0340521 47.973 148 71 5 21 164 41 186 5.54e-30 115
Msa1247590 MtrunA17_Chr3g0138571 30.137 438 232 16 21 448 13 386 2.69e-29 118
Msa1247590 MtrunA17_Chr5g0438191 28.018 439 266 18 21 441 13 419 7.38e-29 117
Msa1247590 MtrunA17_Chr5g0405111 34.432 273 112 7 186 449 3 217 9.35e-29 112
Msa1247590 MtrunA17_Chr7g0227651 30.872 447 215 19 21 448 11 382 5.00e-28 114
Msa1247590 MtrunA17_Chr7g0236211 28.636 440 241 15 21 449 12 389 9.59e-28 114
Msa1247590 MtrunA17_Chr4g0011351 40.110 182 85 5 1 164 1 176 2.82e-27 108
Msa1247590 MtrunA17_Chr8g0340581 43.452 168 82 7 1 164 1 159 1.09e-26 105
Msa1247590 MtrunA17_Chr5g0435741 27.982 436 277 16 21 441 33 446 1.99e-25 108
Msa1247590 MtrunA17_Chr7g0227641 27.876 452 204 17 21 448 11 364 2.86e-25 106
Msa1247590 MtrunA17_Chr2g0321151 43.919 148 67 3 47 189 1 137 9.28e-25 100
Msa1247590 MtrunA17_Chr3g0137701 27.740 447 243 18 21 450 9 392 2.25e-24 104
Msa1247590 MtrunA17_Chr8g0340541 53.846 91 40 2 359 449 16 104 5.39e-24 95.9
Msa1247590 MtrunA17_Chr7g0224001 28.217 443 241 18 21 448 14 394 5.89e-24 103
Msa1247590 MtrunA17_Chr3g0137681 28.246 439 240 20 21 449 10 383 1.82e-23 101
Msa1247590 MtrunA17_Chr3g0086041 26.915 457 233 20 12 449 17 391 2.38e-23 101
Msa1247590 MtrunA17_Chr7g0262081 26.030 461 257 10 1 449 13 401 4.43e-23 100
Msa1247590 MtrunA17_Chr7g0274231 34.685 222 112 8 13 218 4 208 8.12e-22 94.7
Msa1247590 MtrunA17_Chr2g0278121 27.473 455 248 21 21 446 16 417 9.96e-22 97.1
Msa1247590 MtrunA17_Chr6g0466481 25.446 448 239 19 21 449 8 379 2.51e-21 95.5
Msa1247590 MtrunA17_Chr6g0465671 25.446 448 239 19 21 449 8 379 2.61e-21 95.5
Msa1247590 MtrunA17_Chr7g0226481 35.266 207 107 10 14 211 4 192 2.83e-21 94.7
Msa1247590 MtrunA17_Chr7g0226481 30.058 173 107 4 283 449 186 350 1.53e-12 68.6
Msa1247590 MtrunA17_Chr1g0208801 30.485 433 237 21 21 446 8 383 1.42e-20 93.2
Msa1247590 MtrunA17_Chr3g0137721 25.495 455 246 19 21 449 11 398 2.94e-20 92.4
Msa1247590 MtrunA17_Chr7g0255101 26.386 451 257 18 8 449 97 481 7.96e-20 91.7
Msa1247590 MtrunA17_Chr3g0114151 26.591 440 256 14 21 448 24 408 8.30e-20 91.3
Msa1247590 MtrunA17_Chr8g0340571 51.190 84 39 2 359 442 17 98 8.78e-20 84.3
Msa1247590 MtrunA17_Chr5g0423901 27.394 449 245 17 14 448 2 383 2.69e-19 89.4
Msa1247590 MtrunA17_Chr5g0431711 26.291 426 221 20 11 421 2 349 3.83e-19 89.0
Msa1247590 MtrunA17_Chr2g0278791 25.792 442 247 18 21 451 2 373 4.70e-19 89.0
Msa1247590 MtrunA17_Chr6g0458601 26.728 434 255 15 21 449 64 439 8.25e-19 88.6
Msa1247590 MtrunA17_Chr1g0193401 27.314 443 249 17 19 449 177 558 9.40e-19 89.0
Msa1247590 MtrunA17_Chr3g0107721 25.261 479 253 16 19 450 1 421 1.36e-18 87.8
Msa1247590 MtrunA17_Chr5g0419701 26.914 405 229 15 23 416 6 354 1.49e-18 87.4
Msa1247590 MtrunA17_Chr7g0235851 25.056 443 247 16 19 448 3 373 1.10e-17 84.3
Msa1247590 MtrunA17_Chr4g0041581 26.770 452 281 18 9 437 11 435 1.75e-17 84.7
Msa1247590 MtrunA17_Chr7g0227771 31.472 197 110 7 21 208 4 184 3.08e-17 80.1
Msa1247590 MtrunA17_Chr5g0396401 32.075 212 114 9 23 227 10 198 8.70e-17 82.0
Msa1247590 MtrunA17_Chr3g0086141 35.149 202 104 10 19 208 1 187 6.58e-16 76.6
Msa1247590 MtrunA17_Chr7g0227631 28.289 304 152 10 153 448 63 308 6.92e-16 78.2
Msa1247590 MtrunA17_Chr3g0093361 30.374 214 124 8 4 208 26 223 7.51e-16 79.3
Msa1247590 MtrunA17_Chr3g0138371 26.802 444 234 17 21 448 20 388 1.35e-15 78.2
Msa1247590 MtrunA17_Chr7g0227851 34.762 210 98 10 21 212 11 199 2.17e-15 77.8
Msa1247590 MtrunA17_Chr8g0358761 52.174 69 32 1 12 80 4 71 6.01e-15 69.7
Msa1247590 MtrunA17_Chr7g0227821 33.493 209 105 9 21 214 11 200 7.53e-15 73.9
Msa1247590 MtrunA17_Chr4g0027441 26.591 440 252 16 21 421 9 416 2.24e-14 75.1
Msa1247590 MtrunA17_Chr7g0236141 38.983 118 67 3 333 449 110 223 3.69e-14 71.6
Msa1247590 MtrunA17_Chr7g0236091 38.983 118 67 3 333 449 110 223 3.69e-14 71.6
Msa1247590 MtrunA17_Chr7g0236181 38.983 118 67 3 333 449 110 223 3.69e-14 71.6
Msa1247590 MtrunA17_Chr1g0164901 33.023 215 116 8 21 223 9 207 5.07e-14 73.6
Msa1247590 MtrunA17_Chr8g0362011 53.571 56 25 1 349 403 1 56 7.82e-14 66.2
Msa1247590 MtrunA17_Chr3g0091171 31.313 198 111 8 20 208 4 185 8.33e-14 72.8
Msa1247590 MtrunA17_Chr4g0027461 33.610 241 106 11 21 219 9 237 1.06e-13 72.0
Msa1247590 MtrunA17_Chr5g0425131 31.707 205 118 11 11 208 2 191 1.21e-13 70.9
Msa1247590 MtrunA17_Chr7g0231671 25.339 442 276 16 8 417 6 425 2.52e-13 72.0
Msa1247590 MtrunA17_Chr5g0416781 26.362 459 285 18 8 437 6 440 3.20e-13 71.6
Msa1247590 MtrunA17_Chr7g0262121 28.986 207 131 4 8 211 7 200 3.76e-13 70.9
Msa1247590 MtrunA17_Chr7g0262121 35.000 140 81 2 317 449 257 393 6.93e-13 70.1
Msa1247590 MtrunA17_Chr5g0431691 27.628 409 225 17 21 422 5 349 7.67e-13 69.7
Msa1247590 MtrunA17_Chr7g0226471 33.577 137 83 3 320 449 12 147 1.04e-12 65.5
Msa1247590 MtrunA17_Chr7g0246351 31.944 216 108 8 21 210 6 208 1.26e-12 69.3
Msa1247590 MtrunA17_Chr4g0027431 33.168 202 102 9 21 208 9 191 3.08e-12 68.2
Msa1247590 MtrunA17_Chr2g0278801 28.502 207 118 7 21 215 2 190 5.02e-12 65.9
Msa1247590 MtrunA17_Chr7g0236111 42.857 77 44 0 373 449 53 129 7.47e-12 62.8
Msa1247590 MtrunA17_Chr5g0399361 43.243 111 58 4 340 449 123 229 7.55e-12 65.1
Msa1247590 MtrunA17_Chr2g0278101 29.032 217 136 8 11 215 2 212 1.25e-11 65.5
Msa1247590 MtrunA17_Chr4g0023251 30.882 204 119 8 21 213 2 194 1.41e-11 65.1
Msa1247590 MtrunA17_Chr5g0399841 35.294 136 80 5 320 449 50 183 1.43e-11 63.2
Msa1247590 MtrunA17_Chr6g0465731 31.500 200 111 10 23 212 10 193 2.32e-11 65.1
Msa1247590 MtrunA17_Chr1g0198241 40.000 90 38 3 11 100 2 75 2.65e-11 60.5
Msa1247590 MtrunA17_Chr3g0136291 31.579 209 119 11 21 224 14 203 2.79e-11 64.7
Msa1247590 MtrunA17_Chr7g0235821 30.144 209 123 8 19 219 3 196 2.94e-11 65.1
Msa1247590 MtrunA17_Chr5g0437351 41.026 78 37 3 23 100 17 85 3.59e-11 60.1
Msa1247590 MtrunA17_Chr2g0278131 49.315 73 31 2 21 93 14 80 4.56e-11 58.9
Msa1247590 MtrunA17_Chr4g0076481 30.612 196 103 8 21 208 28 198 7.68e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1247590 AT1G06630.7 33.460 263 160 7 21 272 12 270 1.30e-26 109
Msa1247590 AT1G06630.5 33.460 263 160 7 21 272 12 270 2.94e-26 109
Msa1247590 AT1G06630.8 33.460 263 160 7 21 272 12 270 2.94e-26 109
Msa1247590 AT1G06630.9 33.460 263 160 7 21 272 21 279 3.74e-26 110
Msa1247590 AT1G06630.2 33.460 263 160 7 21 272 12 270 4.03e-26 110
Msa1247590 AT1G06630.6 33.460 263 160 7 21 272 12 270 4.03e-26 110
Msa1247590 AT1G06630.4 33.460 263 160 7 21 272 12 270 4.03e-26 110
Msa1247590 AT1G06630.3 33.460 263 160 7 21 272 12 270 4.03e-26 110
Msa1247590 AT1G06630.1 33.460 263 160 7 21 272 12 270 1.16e-25 109
Msa1247590 AT1G78750.2 28.696 460 272 19 21 446 18 455 2.32e-25 108
Msa1247590 AT1G78750.1 28.696 460 272 19 21 446 18 455 2.32e-25 108
Msa1247590 AT5G56420.1 27.093 454 269 16 21 449 6 422 9.57e-25 106
Msa1247590 AT5G56420.2 27.093 454 269 16 21 449 6 422 9.57e-25 106
Msa1247590 AT5G56420.3 27.093 454 269 16 21 449 6 422 9.57e-25 106
Msa1247590 AT4G10400.2 27.252 444 270 16 21 448 2 408 1.14e-23 102
Msa1247590 AT4G10400.3 27.252 444 270 16 21 448 2 408 1.14e-23 102
Msa1247590 AT4G10400.1 27.252 444 270 16 21 448 2 408 1.14e-23 102
Msa1247590 AT4G26340.1 28.097 452 268 16 21 449 2 419 2.51e-23 102
Msa1247590 AT3G58920.1 26.693 502 260 20 21 449 2 468 3.76e-23 102
Msa1247590 AT5G53840.1 27.214 463 274 19 9 446 13 437 1.41e-22 100
Msa1247590 AT4G14096.2 35.556 225 122 9 21 236 8 218 2.82e-22 99.4
Msa1247590 AT4G14096.1 35.556 225 122 9 21 236 8 218 2.82e-22 99.4
Msa1247590 AT4G14103.2 34.081 223 126 8 21 234 8 218 6.87e-22 98.2
Msa1247590 AT4G14103.3 33.632 223 127 8 21 234 8 218 7.29e-22 97.4
Msa1247590 AT4G14103.1 33.632 223 127 8 21 234 8 218 7.29e-22 97.4
Msa1247590 AT2G26030.4 26.782 463 279 18 21 446 4 443 1.88e-21 97.1
Msa1247590 AT5G56370.1 26.509 464 260 18 21 448 2 420 1.95e-21 96.7
Msa1247590 AT5G56370.2 26.509 464 260 18 21 448 2 420 1.95e-21 96.7
Msa1247590 AT3G50710.1 28.172 465 259 20 21 449 2 427 4.39e-21 95.5
Msa1247590 AT5G56400.1 26.294 483 279 19 1 449 16 455 4.87e-21 95.9
Msa1247590 AT2G26030.3 26.998 463 273 18 21 446 4 438 5.79e-21 95.5
Msa1247590 AT2G26030.1 26.998 463 273 18 21 446 4 438 5.79e-21 95.5
Msa1247590 AT5G56560.2 26.802 444 276 17 23 449 7 418 1.06e-20 94.4
Msa1247590 AT3G59200.2 33.500 200 116 6 16 208 2 191 1.11e-20 93.6
Msa1247590 AT3G59200.1 33.500 200 116 6 16 208 2 191 1.77e-20 94.4
Msa1247590 AT5G22730.1 26.407 462 278 17 21 446 28 463 2.63e-20 93.6
Msa1247590 AT5G22730.3 26.407 462 278 17 21 446 28 463 2.63e-20 93.6
Msa1247590 AT1G32375.2 27.468 466 256 21 21 449 2 422 7.95e-20 91.7
Msa1247590 AT1G32375.1 27.468 466 256 21 21 449 2 422 7.95e-20 91.7
Msa1247590 AT5G22720.1 24.740 481 278 19 21 452 23 468 2.58e-19 90.5
Msa1247590 AT3G59230.1 33.168 202 111 7 21 208 12 203 5.15e-19 89.7
Msa1247590 AT1G51370.1 27.051 451 263 20 21 444 19 430 7.90e-19 89.0
Msa1247590 AT5G44950.1 27.166 427 268 14 21 422 4 412 9.49e-19 88.6
Msa1247590 AT5G60610.2 27.119 413 250 16 21 413 2 383 1.19e-18 87.8
Msa1247590 AT5G60610.1 27.119 413 250 16 21 413 2 383 1.19e-18 87.8
Msa1247590 AT3G59170.1 33.054 239 123 9 16 223 2 234 1.30e-18 88.6
Msa1247590 AT4G09920.1 34.375 192 109 7 21 208 2 180 1.59e-18 86.7
Msa1247590 AT4G09920.5 34.375 192 109 7 21 208 2 180 1.59e-18 86.7
Msa1247590 AT5G22610.1 24.249 466 309 14 1 450 1 438 1.84e-18 88.2
Msa1247590 AT4G09920.2 34.375 192 109 7 21 208 2 180 1.91e-18 85.9
Msa1247590 AT4G09920.4 34.375 192 109 7 21 208 2 180 1.91e-18 85.9
Msa1247590 AT4G09920.3 34.375 192 109 7 21 208 2 180 1.91e-18 85.9
Msa1247590 AT1G66310.1 26.735 490 252 23 7 446 7 439 1.96e-18 87.8
Msa1247590 AT1G16930.2 35.096 208 94 9 20 212 14 195 6.73e-18 86.3
Msa1247590 AT1G16930.1 35.096 208 94 9 20 212 14 195 6.73e-18 86.3
Msa1247590 AT1G16930.3 35.096 208 94 9 20 212 14 195 6.73e-18 86.3
Msa1247590 AT4G13965.1 26.350 463 270 20 12 446 1 420 7.26e-18 85.9
Msa1247590 AT5G56380.2 27.137 468 272 18 21 449 2 439 8.71e-18 85.9
Msa1247590 AT5G56380.1 27.137 468 272 18 21 449 2 439 8.71e-18 85.9
Msa1247590 AT3G59160.1 27.469 324 168 12 21 296 13 317 1.19e-17 85.5
Msa1247590 AT3G59210.2 35.961 203 105 7 21 212 7 195 1.35e-17 85.5
Msa1247590 AT3G59210.1 35.961 203 105 7 21 212 7 195 1.35e-17 85.5
Msa1247590 AT3G59210.5 35.961 203 105 7 21 212 7 195 1.35e-17 85.5
Msa1247590 AT3G59210.4 35.961 203 105 7 21 212 7 195 1.35e-17 85.5
Msa1247590 AT3G59210.3 35.961 203 105 7 21 212 7 195 1.35e-17 85.5
Msa1247590 AT5G56820.1 26.923 468 253 20 15 446 9 423 1.57e-17 85.1
Msa1247590 AT5G56810.1 28.791 455 267 18 16 446 10 431 1.97e-17 84.7
Msa1247590 AT5G41830.2 31.500 200 119 7 21 208 13 206 5.62e-17 83.6
Msa1247590 AT1G58310.1 31.390 223 111 9 21 216 8 215 6.43e-17 83.6
Msa1247590 AT1G69630.1 31.963 219 125 8 1 213 1 201 7.59e-17 82.8
Msa1247590 AT5G41840.1 27.476 313 185 14 18 299 11 312 9.90e-17 83.2
Msa1247590 AT4G00320.1 32.178 202 115 9 21 208 13 206 1.28e-16 82.4
Msa1247590 AT3G03040.1 29.845 258 141 10 21 250 2 247 1.66e-16 82.0
Msa1247590 AT4G00160.1 37.245 196 108 7 17 208 11 195 2.27e-16 81.6
Msa1247590 AT5G50270.1 26.622 447 246 16 21 428 2 405 3.18e-16 80.9
Msa1247590 AT3G44810.1 32.512 203 113 7 23 213 9 199 3.42e-16 80.9
Msa1247590 AT5G38390.1 32.735 223 125 8 21 238 2 204 5.60e-16 80.5
Msa1247590 AT3G60040.4 31.364 220 131 7 21 224 13 228 8.94e-16 80.1
Msa1247590 AT3G26922.1 30.841 214 115 8 8 210 1 192 1.05e-15 78.2
Msa1247590 AT3G26922.2 30.841 214 115 8 8 210 1 192 1.05e-15 78.2
Msa1247590 AT3G44060.1 32.308 195 111 5 26 212 4 185 2.29e-15 78.2
Msa1247590 AT3G58820.1 32.278 158 90 5 21 170 2 150 2.41e-15 78.2
Msa1247590 AT4G13960.2 32.308 195 113 6 21 208 2 184 2.45e-15 78.6
Msa1247590 AT4G13960.1 32.308 195 113 6 21 208 2 184 2.45e-15 78.6
Msa1247590 AT3G60040.3 26.355 406 248 15 21 398 233 615 2.56e-15 79.0
Msa1247590 AT3G60040.1 26.355 406 248 15 21 398 232 614 2.65e-15 79.0
Msa1247590 AT3G60040.2 26.355 406 248 15 21 398 232 614 2.99e-15 78.6
Msa1247590 AT3G60040.5 26.355 406 248 15 21 398 230 612 3.09e-15 78.6
Msa1247590 AT3G59240.1 29.703 202 123 6 15 208 2 192 3.62e-15 78.2
Msa1247590 AT2G42720.1 34.536 194 114 7 21 208 2 188 4.49e-15 77.4
Msa1247590 AT5G56690.1 31.980 197 118 7 23 213 4 190 4.69e-15 77.0
Msa1247590 AT3G49030.1 26.360 478 254 21 16 448 16 440 5.24e-15 77.4
Msa1247590 AT3G59190.1 29.000 200 118 6 21 208 12 199 5.34e-15 77.0
Msa1247590 AT3G59190.2 29.000 200 118 6 21 208 12 199 8.67e-15 77.0
Msa1247590 AT3G03030.2 30.348 201 115 8 21 208 2 190 9.43e-15 75.5
Msa1247590 AT5G38396.1 27.848 237 145 8 21 241 2 228 1.53e-14 75.9
Msa1247590 AT3G03030.1 29.851 201 116 7 21 208 2 190 1.63e-14 75.9
Msa1247590 AT3G49150.1 31.980 197 112 9 21 208 16 199 2.11e-14 75.5
Msa1247590 AT5G56370.3 28.364 275 159 11 21 278 2 255 2.80e-14 73.9
Msa1247590 AT4G13985.1 23.632 457 299 14 21 446 19 456 4.02e-14 74.7
Msa1247590 AT4G15060.2 27.119 413 242 16 1 386 4 384 5.79e-14 73.9
Msa1247590 AT3G59000.1 31.492 181 105 6 21 192 2 172 6.24e-14 74.3
Msa1247590 AT5G38392.1 29.851 201 122 7 21 210 2 194 8.13e-14 70.9
Msa1247590 AT1G64540.1 28.470 281 138 13 21 272 5 251 1.05e-13 73.2
Msa1247590 AT1G64540.2 28.470 281 138 13 21 272 5 251 1.05e-13 73.2
Msa1247590 AT5G18780.2 26.580 459 273 21 21 446 11 438 1.08e-13 73.2
Msa1247590 AT5G18780.1 26.580 459 273 21 21 446 11 438 1.08e-13 73.2
Msa1247590 AT4G15060.1 32.487 197 119 7 21 213 172 358 2.08e-13 72.8
Msa1247590 AT1G48400.2 31.633 196 114 8 21 208 10 193 2.66e-13 72.0
Msa1247590 AT1G48400.1 31.633 196 114 8 21 208 10 193 3.71e-13 71.6
Msa1247590 AT2G04230.1 26.186 485 269 20 14 451 6 448 3.76e-13 71.6
Msa1247590 AT1G55030.2 23.963 434 243 17 15 412 13 395 4.37e-13 71.2
Msa1247590 AT1G55030.1 23.963 434 243 17 15 412 3 385 5.09e-13 70.9
Msa1247590 AT5G53635.1 25.431 464 270 20 22 448 1 425 8.08e-13 70.5
Msa1247590 AT3G49030.2 26.464 461 249 22 16 448 16 414 1.45e-12 69.7
Msa1247590 AT1G66300.1 24.512 461 277 19 21 446 29 453 1.66e-12 69.7
Msa1247590 AT3G26930.2 26.844 488 239 19 21 452 21 446 1.97e-12 69.3
Msa1247590 AT5G56440.1 35.468 203 92 11 21 208 2 180 3.02e-12 68.6
Msa1247590 AT1G05080.1 25.714 455 282 18 21 448 13 438 3.84e-12 68.6
Msa1247590 AT5G18780.3 31.795 195 114 8 21 212 11 189 4.50e-12 67.8
Msa1247590 AT5G18780.4 31.795 195 114 8 21 212 11 189 4.50e-12 67.8
Msa1247590 AT1G60400.1 29.756 205 110 7 21 212 14 197 5.25e-12 67.8
Msa1247590 AT3G62440.1 27.830 212 120 5 21 212 2 200 8.69e-12 67.4
Msa1247590 AT3G59150.1 32.967 182 98 8 20 192 12 178 9.24e-12 67.4
Msa1247590 AT1G56610.2 33.854 192 103 9 26 208 15 191 1.00e-11 67.4
Msa1247590 AT3G51530.1 27.312 465 261 23 21 449 30 453 1.27e-11 67.0
Msa1247590 AT5G56410.1 29.612 206 114 8 28 213 10 204 1.43e-11 67.0
Msa1247590 AT3G59000.2 33.858 127 68 4 21 140 2 119 1.44e-11 66.2
Msa1247590 AT4G22280.2 30.653 199 113 7 21 212 2 182 1.50e-11 65.9
Msa1247590 AT5G35995.2 30.769 195 110 8 21 208 5 181 1.64e-11 66.6
Msa1247590 AT5G35995.1 30.769 195 110 8 21 208 5 181 1.64e-11 66.6
Msa1247590 AT4G22280.1 30.653 199 113 7 21 212 2 182 1.66e-11 66.2
Msa1247590 AT1G56610.1 33.854 192 103 9 26 208 78 254 1.98e-11 66.6
Msa1247590 AT1G13570.3 31.401 207 106 10 21 214 6 189 2.58e-11 65.9
Msa1247590 AT1G13570.1 31.401 207 106 10 21 214 6 189 2.58e-11 65.9
Msa1247590 AT5G18770.1 26.552 467 286 19 21 454 24 466 2.66e-11 65.9
Msa1247590 AT1G13570.2 31.401 207 106 10 21 214 6 189 3.29e-11 64.3
Msa1247590 AT3G26922.3 30.337 178 92 7 44 210 7 163 5.64e-11 63.5
Msa1247590 AT3G26922.5 30.337 178 92 7 44 210 7 163 5.64e-11 63.5
Msa1247590 AT5G56560.1 29.381 194 119 5 23 213 7 185 6.87e-11 64.7

Find 113 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCCAAGTGAAATTGTTAT+TGG 0.238664 8_2:-40725859 None:intergenic
TGCAGATGATGACATGTTTC+TGG 0.246801 8_2:+40724473 Msa1247590:CDS
AGGTGAGATTCAAGACATTT+TGG 0.257822 8_2:-40726477 None:intergenic
GATTGTTGATACGGAGGTTT+TGG 0.266033 8_2:-40724262 None:intergenic
GAAACTCCACCATGTCCTTT+TGG 0.274770 8_2:+40725719 Msa1247590:CDS
ACTAGAAAACACATACTTAA+AGG 0.286790 8_2:-40728925 None:intergenic
TGATGTAAATTGCAAAATTC+TGG 0.292545 8_2:-40726215 None:intergenic
AGGAGCAAAACCTATAAATA+TGG 0.301415 8_2:+40728798 Msa1247590:three_prime_UTR
CTCGCCGCTGGCGCCATCTC+TGG 0.310072 8_2:+40724295 Msa1247590:CDS
TGTGGCTCCCATGTTCTTAA+AGG 0.320804 8_2:-40726441 None:intergenic
TTGGTAAATTTCAAACTCTT+GGG 0.324937 8_2:-40725840 None:intergenic
ATTGGTAAATTTCAAACTCT+TGG 0.326362 8_2:-40725841 None:intergenic
ATGTGGCTCAATGCTGTTAA+TGG 0.338769 8_2:+40724510 Msa1247590:CDS
AATTCCTATGTCGGGATAAC+AGG 0.348689 8_2:-40725898 None:intergenic
TACCTCTTCTAAGCCAGTTT+CGG 0.353099 8_2:-40724098 None:intergenic
TCAATTGTTGCCCTTCTCTC+TGG 0.354482 8_2:+40725744 Msa1247590:CDS
ATTTCAAGAAGTCTTTCAAT+AGG 0.375682 8_2:-40728883 None:intergenic
TCTCATAAGTCAGAGCAATA+AGG 0.376352 8_2:+40726313 Msa1247590:CDS
TCTCTCTCGTTTCTCGCCGC+TGG 0.398888 8_2:+40724283 Msa1247590:CDS
CTGACTTATGTTCACATAGA+AGG 0.406124 8_2:+40726498 Msa1247590:CDS
CTTCATATATATCTCTAGTT+CGG 0.413575 8_2:-40726022 None:intergenic
GAGCAGTTGAAGAGAGAAGA+AGG 0.426040 8_2:-40724597 None:intergenic
TGACGGTGCAATCTATTTGA+AGG 0.429149 8_2:+40725656 Msa1247590:CDS
CGGGTGTTCGCAGTAACAAT+TGG 0.430664 8_2:-40724355 None:intergenic
TTGAAACACTGCAGTCTTGA+CGG 0.431575 8_2:+40725639 Msa1247590:intron
TTCGGAGGTTGTAGAGAATA+GGG 0.436850 8_2:-40726004 None:intergenic
TTCGAATGTCGCGGGATTCG+CGG 0.443894 8_2:-40724428 None:intergenic
TCCCATGTTCTTAAAGGTGA+TGG 0.457043 8_2:-40726435 None:intergenic
TGGCTAATTGCATTGATATG+TGG 0.457305 8_2:+40724493 Msa1247590:CDS
GACGCAGCCGTGTCTCCTTA+AGG 0.460023 8_2:+40726696 Msa1247590:CDS
TCAGCAAGTTCACAAGTCTC+TGG 0.462860 8_2:+40728831 Msa1247590:three_prime_UTR
GTTCGGAGGTTGTAGAGAAT+AGG 0.465725 8_2:-40726005 None:intergenic
TGAAGAGAGAAGAAGGGAAG+AGG 0.468378 8_2:-40724590 None:intergenic
GTTCACATAGAAGGATATCA+AGG 0.472172 8_2:+40726507 Msa1247590:CDS
CTTCAGTGAAGGAAAATAAA+CGG 0.476012 8_2:-40725691 None:intergenic
TTATGAGAACTTGAAGCATA+TGG 0.476990 8_2:-40726298 None:intergenic
TGTGAGATAATTTGTTGAGA+TGG 0.486797 8_2:+40728999 Msa1247590:three_prime_UTR
GCTCCAACCTCGTCTCTCTC+AGG 0.490628 8_2:+40724616 Msa1247590:CDS
GCCAATGTAATTCCTATGTC+GGG 0.493069 8_2:-40725906 None:intergenic
GGGCAACAATTGAGTCCAAA+AGG 0.494834 8_2:-40725734 None:intergenic
CATGGGGCAGCCAGAGAGAA+GGG 0.495273 8_2:-40725754 None:intergenic
CTTCTATGTGAACATAAGTC+AGG 0.496958 8_2:-40726497 None:intergenic
AACGAGAGAGATTGTTGATA+CGG 0.510527 8_2:-40724271 None:intergenic
CAAAAGATTCGAGTTAAAGC+AGG 0.513150 8_2:-40726255 None:intergenic
AGCAGTTGAAGAGAGAAGAA+GGG 0.517841 8_2:-40724596 None:intergenic
GCATGGGGCAGCCAGAGAGA+AGG 0.524254 8_2:-40725755 None:intergenic
GGATTCGCGGAGGGCGAAGA+CGG 0.525359 8_2:-40724415 None:intergenic
ATTGAAGATGCTTCCAGAGA+TGG 0.526620 8_2:-40724308 None:intergenic
TGGTAAATTTCAAACTCTTG+GGG 0.526740 8_2:-40725839 None:intergenic
TCAAGGATTTGAAGATGAGC+TGG 0.532840 8_2:+40726524 Msa1247590:CDS
TTACCAATAACAATTTCACT+TGG 0.535050 8_2:+40725856 Msa1247590:CDS
GAACAAAACGACGTCGTCAT+CGG 0.535611 8_2:+40724180 Msa1247590:CDS
ATATCAAAAGTTTCGAGCAT+GGG 0.539933 8_2:-40725771 None:intergenic
ACGCAGCTTTCGAATGTCGC+GGG 0.545435 8_2:-40724436 None:intergenic
GGCCAATGTAATTCCTATGT+CGG 0.551371 8_2:-40725907 None:intergenic
AGTTCACAAGTCTCTGGAAG+AGG 0.552164 8_2:+40728837 Msa1247590:three_prime_UTR
AACCATCACCTTTAAGAACA+TGG 0.553947 8_2:+40726433 Msa1247590:CDS
CGAAAGCTGCGTCTCAAATG+TGG 0.557588 8_2:+40724447 Msa1247590:CDS
GTAACAATTGGAGTCGGAGT+CGG 0.559467 8_2:-40724343 None:intergenic
TTTGGAACTGTTGTTGACTG+TGG 0.559593 8_2:-40726459 None:intergenic
ATGTGGCAGAGTATAGAGTC+TGG 0.559921 8_2:-40724222 None:intergenic
GATTCCTGTTATCCCGACAT+AGG 0.564203 8_2:+40725894 Msa1247590:CDS
GCTTCCAGAGATGGCGCCAG+CGG 0.565504 8_2:-40724299 None:intergenic
GGGAGGTAGTGGTACACCAT+TGG 0.568804 8_2:-40725817 None:intergenic
CCACGCTCTGCAAGTTGTCA+AGG 0.570001 8_2:-40725932 None:intergenic
GACAGAGCCCCTTGGTACAT+CGG 0.570357 8_2:-40726655 None:intergenic
GGTAAATTTCAAACTCTTGG+GGG 0.573188 8_2:-40725838 None:intergenic
CATATATATCTCTAGTTCGG+AGG 0.581680 8_2:-40726019 None:intergenic
AAGATTAGCCGATGTACCAA+GGG 0.582750 8_2:+40726647 Msa1247590:CDS
ATACCTGAGAGAGACGAGGT+TGG 0.584623 8_2:-40724619 None:intergenic
AATATCAAAAGTTTCGAGCA+TGG 0.586764 8_2:-40725772 None:intergenic
TTCTGGATGATTTAAAACTG+CGG 0.592985 8_2:-40726198 None:intergenic
GAGAGACAGATCAACAAGGT+GGG 0.594284 8_2:-40724535 None:intergenic
AGATAATTTGTTGAGATGGA+TGG 0.594793 8_2:+40729003 Msa1247590:three_prime_UTR
GGTGTTGACGAAGGATGCAA+AGG 0.595972 8_2:-40724394 None:intergenic
GAATGTCGCGGGATTCGCGG+AGG 0.597017 8_2:-40724425 None:intergenic
ACCATCACCTTTAAGAACAT+GGG 0.597069 8_2:+40726434 Msa1247590:CDS
GCAGAGTATAGAGTCTGGTA+AGG 0.599401 8_2:-40724217 None:intergenic
TTGCATGTGACAGAGCCCCT+TGG 0.600815 8_2:-40726663 None:intergenic
CCTTGACAACTTGCAGAGCG+TGG 0.603355 8_2:+40725932 Msa1247590:CDS
AAAGATTAGCCGATGTACCA+AGG 0.604504 8_2:+40726646 Msa1247590:CDS
CGCGGTTTCAGTGACTTCAA+CGG 0.605951 8_2:-40724121 None:intergenic
AATGTCGCGGGATTCGCGGA+GGG 0.606038 8_2:-40724424 None:intergenic
TCCCGACATAGGAATTACAT+TGG 0.608308 8_2:+40725905 Msa1247590:CDS
GTAAATTTCAAACTCTTGGG+GGG 0.608751 8_2:-40725837 None:intergenic
AGTTTCAGCATCTTCAGTGA+AGG 0.610713 8_2:-40725702 None:intergenic
CAATTGAGTCCAAAAGGACA+TGG 0.611473 8_2:-40725728 None:intergenic
GAGAGAGATTGTTGATACGG+AGG 0.615530 8_2:-40724268 None:intergenic
ATCCGAAACTGGCTTAGAAG+AGG 0.620784 8_2:+40724096 None:intergenic
AGAGACAGATCAACAAGGTG+GGG 0.620971 8_2:-40724534 None:intergenic
GACGCAGCTTTCGAATGTCG+CGG 0.621237 8_2:-40724437 None:intergenic
AAAAGATTCGAGTTAAAGCA+GGG 0.621713 8_2:-40726254 None:intergenic
GGCGAAGACGGTGTTGACGA+AGG 0.622034 8_2:-40724403 None:intergenic
TATCAAAAGTTTCGAGCATG+GGG 0.622663 8_2:-40725770 None:intergenic
TTCGCAGTAACAATTGGAGT+CGG 0.623591 8_2:-40724349 None:intergenic
GCTGCGTCATTCGACATCAA+AGG 0.623855 8_2:+40726064 Msa1247590:CDS
AGTCACTGAAACCGCGATGG+CGG 0.635288 8_2:+40724128 Msa1247590:exon
TTGAGAGGAATGAAAGGATG+TGG 0.635310 8_2:-40724239 None:intergenic
GCTCTGCAAGTTGTCAAGGA+CGG 0.642771 8_2:-40725928 None:intergenic
TTTAAAACTGCGGTGTGAGG+TGG 0.655264 8_2:-40726188 None:intergenic
TGACAACTTGCAGAGCGTGG+TGG 0.655980 8_2:+40725935 Msa1247590:CDS
TGATTTAAAACTGCGGTGTG+AGG 0.659188 8_2:-40726191 None:intergenic
TGAAGTCACTGAAACCGCGA+TGG 0.660540 8_2:+40724125 Msa1247590:exon
AAGAAAGAGAAACATTTATG+CGG 0.668329 8_2:+40726042 Msa1247590:CDS
GTTTGCACCTTAAGGAGACA+CGG 0.678298 8_2:-40726703 None:intergenic
TTGAGTCCAAAAGGACATGG+TGG 0.681011 8_2:-40725725 None:intergenic
TTCTAGTTAACTGATTACAG+TGG 0.681999 8_2:+40728941 Msa1247590:three_prime_UTR
TACACCATTGGTAAAAGATG+TGG 0.685489 8_2:-40725805 None:intergenic
CGGTGAGAGACAGATCAACA+AGG 0.685615 8_2:-40724539 None:intergenic
TGAGAGACAGATCAACAAGG+TGG 0.688449 8_2:-40724536 None:intergenic
GAGGATTGACTCCGCCATCG+CGG 0.718015 8_2:-40724139 None:intergenic
AGATTAGCCGATGTACCAAG+GGG 0.736672 8_2:+40726648 Msa1247590:CDS
TAAGATACCTGAGAGAGACG+AGG 0.739106 8_2:-40724623 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTCAATTAAGATTAT+AGG + chr8_2:40724910-40724929 Msa1247590:intron 10.0%
!!! TTTTTTCAATTAAGATTATA+GGG + chr8_2:40724911-40724930 Msa1247590:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + chr8_2:40726896-40726915 Msa1247590:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG + chr8_2:40726897-40726916 Msa1247590:intron 10.0%
!!! ATAAAATTTTCTTCTATTTT+AGG - chr8_2:40727165-40727184 None:intergenic 10.0%
!! TTCATTTGTATAATAAAATA+TGG - chr8_2:40727348-40727367 None:intergenic 10.0%
!!! TTTTTCAATTAAGATTATAG+GGG + chr8_2:40724912-40724931 Msa1247590:intron 15.0%
!!! TTTTTAATTCATTAAGTGAT+TGG - chr8_2:40725300-40725319 None:intergenic 15.0%
!!! TATTTTTGTTGATATTTCAA+TGG + chr8_2:40726596-40726615 Msa1247590:CDS 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + chr8_2:40726898-40726917 Msa1247590:intron 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + chr8_2:40726961-40726980 Msa1247590:intron 15.0%
!! AATTAGAGTTATATTGTATT+GGG + chr8_2:40726962-40726981 Msa1247590:intron 15.0%
!!! ACTCTTTTTTTTTAGTAAAT+GGG + chr8_2:40727032-40727051 Msa1247590:intron 15.0%
!!! TTATCAAGTTTTACAAATAT+TGG + chr8_2:40727181-40727200 Msa1247590:intron 15.0%
!!! TTTTTTTATTTCTTCGTTTT+TGG + chr8_2:40727566-40727585 Msa1247590:intron 15.0%
!! ATTGAAAAATCCATATTTAT+AGG - chr8_2:40728811-40728830 None:intergenic 15.0%
!!! TATCACATTATGAATTTGTT+TGG + chr8_2:40724682-40724701 Msa1247590:intron 20.0%
!!! AATTTGTTTGGTAAAAACTA+GGG + chr8_2:40724694-40724713 Msa1247590:intron 20.0%
!! CAAGTAGCTTATAAAAAAAA+TGG + chr8_2:40724986-40725005 Msa1247590:intron 20.0%
!! AAAAACATCTAGCAAATATA+GGG - chr8_2:40725136-40725155 None:intergenic 20.0%
!!! TATATTTGCTAGATGTTTTT+CGG + chr8_2:40725136-40725155 Msa1247590:intron 20.0%
!!! GGTAGATTATCATTTTTTAA+AGG + chr8_2:40725498-40725517 Msa1247590:intron 20.0%
!!! AGATTATCATTTTTTAAAGG+TGG + chr8_2:40725501-40725520 Msa1247590:intron 20.0%
!!! AACAAATTTATTTTCAGATG+GGG - chr8_2:40725982-40726001 None:intergenic 20.0%
!!! CAACAAATTTATTTTCAGAT+GGG - chr8_2:40725983-40726002 None:intergenic 20.0%
!!! TCAACAAATTTATTTTCAGA+TGG - chr8_2:40725984-40726003 None:intergenic 20.0%
!!! GAAGTTTTTACTGTTATTTT+TGG + chr8_2:40726088-40726107 Msa1247590:intron 20.0%
!! AGTTTAATTGAATCAATCTT+TGG + chr8_2:40726351-40726370 Msa1247590:intron 20.0%
!! ATTCAGTAAGCAAAATAAAA+AGG - chr8_2:40726740-40726759 None:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG + chr8_2:40726921-40726940 Msa1247590:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr8_2:40726994-40727013 Msa1247590:intron 20.0%
!!! GACTCTTTTTTTTTAGTAAA+TGG + chr8_2:40727031-40727050 Msa1247590:intron 20.0%
!! AGTTTATTTATTTCACAGAT+AGG - chr8_2:40727220-40727239 None:intergenic 20.0%
!!! TTTTTAACTAGTACTTGAAA+AGG - chr8_2:40727300-40727319 None:intergenic 20.0%
!!! AAATATTATGCGATTTTAGT+TGG + chr8_2:40727317-40727336 Msa1247590:intron 20.0%
!! AGAAATAAAAAAAGCCATAA+AGG - chr8_2:40727559-40727578 None:intergenic 20.0%
!! GTATTATATAACAAAACTCT+TGG + chr8_2:40727666-40727685 Msa1247590:intron 20.0%
!!! TAATTGATAACATACTTTCA+GGG - chr8_2:40728233-40728252 None:intergenic 20.0%
!! TAACAAATTTAGTTGGAAAA+AGG - chr8_2:40728431-40728450 None:intergenic 20.0%
!!! AACTTTATTTCACTTTATGT+TGG + chr8_2:40728738-40728757 Msa1247590:intron 20.0%
!! GAATTTGTTTGGTAAAAACT+AGG + chr8_2:40724693-40724712 Msa1247590:intron 25.0%
! ATGATTGAATTTGTAGTGTT+CGG + chr8_2:40724817-40724836 Msa1247590:intron 25.0%
! TAAGATTATAGGGGTAAAAT+TGG + chr8_2:40724921-40724940 Msa1247590:intron 25.0%
! GAAAAACATCTAGCAAATAT+AGG - chr8_2:40725137-40725156 None:intergenic 25.0%
!! ACTGCATTACATGATAATTT+TGG - chr8_2:40725553-40725572 None:intergenic 25.0%
! TTGGTAAATTTCAAACTCTT+GGG - chr8_2:40725843-40725862 None:intergenic 25.0%
! ATTGGTAAATTTCAAACTCT+TGG - chr8_2:40725844-40725863 None:intergenic 25.0%
! TTACCAATAACAATTTCACT+TGG + chr8_2:40725856-40725875 Msa1247590:CDS 25.0%
! CTTCATATATATCTCTAGTT+CGG - chr8_2:40726025-40726044 None:intergenic 25.0%
! AAGAAAGAGAAACATTTATG+CGG + chr8_2:40726042-40726061 Msa1247590:CDS 25.0%
! TGATGTAAATTGCAAAATTC+TGG - chr8_2:40726218-40726237 None:intergenic 25.0%
!!! ATATATTTTTGCCTTGTTTC+TGG + chr8_2:40726403-40726422 Msa1247590:intron 25.0%
!! GTTGAATATATTTTGCAGAA+CGG + chr8_2:40726552-40726571 Msa1247590:CDS 25.0%
! GAAAGTGGAATATATTGAAT+TGG + chr8_2:40726920-40726939 Msa1247590:intron 25.0%
! TCATCATCTGATTAAATTGA+TGG + chr8_2:40727126-40727145 Msa1247590:intron 25.0%
! TTATTTATTTCACAGATAGG+TGG - chr8_2:40727217-40727236 None:intergenic 25.0%
! AATAGTAAAGAAATATGGTG+AGG - chr8_2:40727275-40727294 None:intergenic 25.0%
! AGGCAAATAGTAAAGAAATA+TGG - chr8_2:40727280-40727299 None:intergenic 25.0%
! TATACTTCTCATTATGTAGT+CGG - chr8_2:40727436-40727455 None:intergenic 25.0%
!!! GAGAAGTATACTCATTTTTA+TGG + chr8_2:40727446-40727465 Msa1247590:intron 25.0%
! AAAAGAATATGCTTGCATAA+AGG - chr8_2:40727503-40727522 None:intergenic 25.0%
!!! ATGCAAGCATATTCTTTTTT+TGG + chr8_2:40727505-40727524 Msa1247590:intron 25.0%
! TTAGCCAAAAGTTAAGATAT+CGG - chr8_2:40727707-40727726 None:intergenic 25.0%
!!! AGTATGTTAACTATTTCTGT+TGG + chr8_2:40727858-40727877 Msa1247590:intron 25.0%
! TGGCTTATATTTCATATCTA+TGG + chr8_2:40727910-40727929 Msa1247590:intron 25.0%
! GGCTTATATTTCATATCTAT+GGG + chr8_2:40727911-40727930 Msa1247590:intron 25.0%
!! ATTTCATATCTATGGGTTTT+TGG + chr8_2:40727918-40727937 Msa1247590:intron 25.0%
! TAAAATGTGTAGCATATTTC+CGG - chr8_2:40727995-40728014 None:intergenic 25.0%
!! GTAATTGATAACATACTTTC+AGG - chr8_2:40728234-40728253 None:intergenic 25.0%
! AAGCAAGCAAAAACATTAAA+TGG - chr8_2:40728282-40728301 None:intergenic 25.0%
! AATCAACTGATTATTGAAAG+AGG + chr8_2:40728359-40728378 Msa1247590:intron 25.0%
! ATCAACTGATTATTGAAAGA+GGG + chr8_2:40728360-40728379 Msa1247590:intron 25.0%
! TAAAATAGCCCTCTATTAAA+GGG - chr8_2:40728404-40728423 None:intergenic 25.0%
! ATAAAATAGCCCTCTATTAA+AGG - chr8_2:40728405-40728424 None:intergenic 25.0%
! GCATATGTAACAAATTTAGT+TGG - chr8_2:40728438-40728457 None:intergenic 25.0%
!!! ATAACTTGCTTCTTTAGTTT+AGG + chr8_2:40728469-40728488 Msa1247590:intron 25.0%
! AATAATCACATATTGCCAAA+TGG + chr8_2:40728517-40728536 Msa1247590:intron 25.0%
!! GAAAGTACATTAATTACTGA+TGG + chr8_2:40728568-40728587 Msa1247590:intron 25.0%
!! CAAATACTATGTTTTACTCT+TGG + chr8_2:40728860-40728879 Msa1247590:three_prime_UTR 25.0%
! ATTTCAAGAAGTCTTTCAAT+AGG - chr8_2:40728886-40728905 None:intergenic 25.0%
! ACTAGAAAACACATACTTAA+AGG - chr8_2:40728928-40728947 None:intergenic 25.0%
GTAACCATGACAGTTAAAAA+CGG - chr8_2:40724562-40724581 None:intergenic 30.0%
! GCTAGCTTATAATTATGAAG+AGG + chr8_2:40724856-40724875 Msa1247590:intron 30.0%
! TAGCAAATATAGGGTTTGTT+TGG - chr8_2:40725127-40725146 None:intergenic 30.0%
AGTTCACATTAATTGTATCC+TGG + chr8_2:40725178-40725197 Msa1247590:intron 30.0%
GTATCTGTTGTCTATAACAT+AGG + chr8_2:40725477-40725496 Msa1247590:intron 30.0%
CTTCAGTGAAGGAAAATAAA+CGG - chr8_2:40725694-40725713 None:intergenic 30.0%
ATATCAAAAGTTTCGAGCAT+GGG - chr8_2:40725774-40725793 None:intergenic 30.0%
AATATCAAAAGTTTCGAGCA+TGG - chr8_2:40725775-40725794 None:intergenic 30.0%
TGGTAAATTTCAAACTCTTG+GGG - chr8_2:40725842-40725861 None:intergenic 30.0%
AGTCCAAGTGAAATTGTTAT+TGG - chr8_2:40725862-40725881 None:intergenic 30.0%
! TTCTGGATGATTTAAAACTG+CGG - chr8_2:40726201-40726220 None:intergenic 30.0%
! AAAAGATTCGAGTTAAAGCA+GGG - chr8_2:40726257-40726276 None:intergenic 30.0%
TTATGAGAACTTGAAGCATA+TGG - chr8_2:40726301-40726320 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr8_2:40726905-40726924 Msa1247590:intron 30.0%
! TTGAAATGGCTCAGTTATTT+TGG + chr8_2:40727008-40727027 Msa1247590:intron 30.0%
!! TGAAATGGCTCAGTTATTTT+GGG + chr8_2:40727009-40727028 Msa1247590:intron 30.0%
TTGTCATAGACTAAGTCTTA+TGG + chr8_2:40727400-40727419 Msa1247590:intron 30.0%
! ATATGCCTTTTCTTCCTTTA+TGG + chr8_2:40727542-40727561 Msa1247590:intron 30.0%
AAAAGCCATAAAGGAAGAAA+AGG - chr8_2:40727550-40727569 None:intergenic 30.0%
!!! TGCATTAGTTTTTGCATGTA+TGG + chr8_2:40727595-40727614 Msa1247590:intron 30.0%
CAATTTAGTACGCATATGTT+AGG - chr8_2:40727784-40727803 None:intergenic 30.0%
!! AAATTGATGATGATCAACAC+TGG + chr8_2:40727798-40727817 Msa1247590:intron 30.0%
!! AATTGATGATGATCAACACT+GGG + chr8_2:40727799-40727818 Msa1247590:intron 30.0%
!!! TTCTGTTGGTTTGCTAATTT+TGG + chr8_2:40727872-40727891 Msa1247590:intron 30.0%
GCACAATAACTTAGTAGTAT+CGG - chr8_2:40727952-40727971 None:intergenic 30.0%
! TTATTGTGCTTGAGATTTTG+AGG + chr8_2:40727963-40727982 Msa1247590:intron 30.0%
ACATGAATCATCATAATGCT+AGG + chr8_2:40728074-40728093 Msa1247590:intron 30.0%
GTTGATTACTCTTACAAAAG+AGG - chr8_2:40728346-40728365 None:intergenic 30.0%
TCAACTGATTATTGAAAGAG+GGG + chr8_2:40728361-40728380 Msa1247590:intron 30.0%
!!! TCTTTTTTCCCCTTTAATAG+AGG + chr8_2:40728392-40728411 Msa1247590:intron 30.0%
!!! CTTTTTTCCCCTTTAATAGA+GGG + chr8_2:40728393-40728412 Msa1247590:intron 30.0%
AAAATAGCCCTCTATTAAAG+GGG - chr8_2:40728403-40728422 None:intergenic 30.0%
CTAAAGAAGCAAGTTATGAA+TGG - chr8_2:40728466-40728485 None:intergenic 30.0%
TGTACTTTCAATCCATAATC+AGG - chr8_2:40728557-40728576 None:intergenic 30.0%
! AGATTAGTCGTTTGAGAATT+AGG + chr8_2:40728618-40728637 Msa1247590:intron 30.0%
CAAGTTTAGTGTTCATTGTT+TGG + chr8_2:40728692-40728711 Msa1247590:intron 30.0%
! ATTGTTTGGAATAAGCTTGA+TGG + chr8_2:40728706-40728725 Msa1247590:intron 30.0%
!!! CTTTTCTGGCTTCATTAAAA+AGG + chr8_2:40728768-40728787 Msa1247590:three_prime_UTR 30.0%
TTCATTAAAAAGGTGACATC+AGG + chr8_2:40728778-40728797 Msa1247590:three_prime_UTR 30.0%
AGGAGCAAAACCTATAAATA+TGG + chr8_2:40728798-40728817 Msa1247590:three_prime_UTR 30.0%
! TTCTAGTTAACTGATTACAG+TGG + chr8_2:40728941-40728960 Msa1247590:three_prime_UTR 30.0%
!! TGTGAGATAATTTGTTGAGA+TGG + chr8_2:40728999-40729018 Msa1247590:three_prime_UTR 30.0%
!! AGATAATTTGTTGAGATGGA+TGG + chr8_2:40729003-40729022 Msa1247590:three_prime_UTR 30.0%
!! CGTTTTGTTCTTCTGCTTTT+TGG - chr8_2:40724170-40724189 None:intergenic 35.0%
!! TTTTGGTTGAGAGGAATGAA+AGG - chr8_2:40724248-40724267 None:intergenic 35.0%
AACGAGAGAGATTGTTGATA+CGG - chr8_2:40724274-40724293 None:intergenic 35.0%
!!! AAGGTTTTGAAGAGTTGTTG+CGG - chr8_2:40724378-40724397 None:intergenic 35.0%
! TGGCTAATTGCATTGATATG+TGG + chr8_2:40724493-40724512 Msa1247590:CDS 35.0%
GCTGATAAGTTACATTGTAG+CGG + chr8_2:40724721-40724740 Msa1247590:intron 35.0%
AGAAAGTGACGTTTACCAAA+CGG + chr8_2:40725042-40725061 Msa1247590:intron 35.0%
! AATATAGGGTTTGTTTGGCA+AGG - chr8_2:40725122-40725141 None:intergenic 35.0%
TTGAATGTAACTACATCCGT+CGG - chr8_2:40725218-40725237 None:intergenic 35.0%
TCACACCTCATTAATTGATG+TGG + chr8_2:40725331-40725350 Msa1247590:intron 35.0%
TAAATTATTACCGCTGTCTG+CGG + chr8_2:40725441-40725460 Msa1247590:intron 35.0%
TATCAAAAGTTTCGAGCATG+GGG - chr8_2:40725773-40725792 None:intergenic 35.0%
! ATCACCACATCTTTTACCAA+TGG + chr8_2:40725801-40725820 Msa1247590:CDS 35.0%
TACACCATTGGTAAAAGATG+TGG - chr8_2:40725808-40725827 None:intergenic 35.0%
GTAAATTTCAAACTCTTGGG+GGG - chr8_2:40725840-40725859 None:intergenic 35.0%
GGTAAATTTCAAACTCTTGG+GGG - chr8_2:40725841-40725860 None:intergenic 35.0%
! CATATATATCTCTAGTTCGG+AGG - chr8_2:40726022-40726041 None:intergenic 35.0%
! CAAAAGATTCGAGTTAAAGC+AGG - chr8_2:40726258-40726277 None:intergenic 35.0%
TCTCATAAGTCAGAGCAATA+AGG + chr8_2:40726313-40726332 Msa1247590:CDS 35.0%
!!! ATTTTTGCCTTGTTTCTGGT+AGG + chr8_2:40726407-40726426 Msa1247590:intron 35.0%
! AACCATCACCTTTAAGAACA+TGG + chr8_2:40726433-40726452 Msa1247590:CDS 35.0%
! ACCATCACCTTTAAGAACAT+GGG + chr8_2:40726434-40726453 Msa1247590:CDS 35.0%
! AGGTGAGATTCAAGACATTT+TGG - chr8_2:40726480-40726499 None:intergenic 35.0%
CTTCTATGTGAACATAAGTC+AGG - chr8_2:40726500-40726519 None:intergenic 35.0%
CTGACTTATGTTCACATAGA+AGG + chr8_2:40726498-40726517 Msa1247590:CDS 35.0%
GTTCACATAGAAGGATATCA+AGG + chr8_2:40726507-40726526 Msa1247590:CDS 35.0%
!!! AGTCCGTTAGCTTTTTTGTT+GGG + chr8_2:40726815-40726834 Msa1247590:intron 35.0%
CAACCCAACAAAAAAGCTAA+CGG - chr8_2:40726821-40726840 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG - chr8_2:40726876-40726895 None:intergenic 35.0%
AGTAAATGGGTCAGATATTC+CGG + chr8_2:40727045-40727064 Msa1247590:intron 35.0%
AGTAGGTTAGATTGTGAATG+AGG + chr8_2:40727077-40727096 Msa1247590:intron 35.0%
AGTAAAGAAATATGGTGAGG+AGG - chr8_2:40727272-40727291 None:intergenic 35.0%
!!! TTGGTTTGCTAATTTTGGAG+TGG + chr8_2:40727877-40727896 Msa1247590:intron 35.0%
GAAATATAAGCCAATACCCA+AGG - chr8_2:40727903-40727922 None:intergenic 35.0%
!!! TGAGATTTTGAGGTGTAAAC+CGG + chr8_2:40727973-40727992 Msa1247590:intron 35.0%
AATTCAAAGCATACAGGAGA+GGG - chr8_2:40728201-40728220 None:intergenic 35.0%
AAATTCAAAGCATACAGGAG+AGG - chr8_2:40728202-40728221 None:intergenic 35.0%
CCTTCAAATTCAAAGCATAC+AGG - chr8_2:40728207-40728226 None:intergenic 35.0%
! CCTGTATGCTTTGAATTTGA+AGG + chr8_2:40728204-40728223 Msa1247590:intron 35.0%
TTACAAAAGAGGTAGAAAGC+TGG - chr8_2:40728335-40728354 None:intergenic 35.0%
TTTCAATCCATAATCAGGTC+TGG - chr8_2:40728552-40728571 None:intergenic 35.0%
TACCTCTTCTAAGCCAGTTT+CGG - chr8_2:40724101-40724120 None:intergenic 40.0%
!!! CTTCTGCTTTTTGGAGTTTG+AGG - chr8_2:40724161-40724180 None:intergenic 40.0%
TTGAGAGGAATGAAAGGATG+TGG - chr8_2:40724242-40724261 None:intergenic 40.0%
! GATTGTTGATACGGAGGTTT+TGG - chr8_2:40724265-40724284 None:intergenic 40.0%
ATTGAAGATGCTTCCAGAGA+TGG - chr8_2:40724311-40724330 None:intergenic 40.0%
TTCGCAGTAACAATTGGAGT+CGG - chr8_2:40724352-40724371 None:intergenic 40.0%
!!! AGGTTTTGAAGAGTTGTTGC+GGG - chr8_2:40724377-40724396 None:intergenic 40.0%
TGCAGATGATGACATGTTTC+TGG + chr8_2:40724473-40724492 Msa1247590:CDS 40.0%
ATGTGGCTCAATGCTGTTAA+TGG + chr8_2:40724510-40724529 Msa1247590:CDS 40.0%
!! CTCACCGTTTTTAACTGTCA+TGG + chr8_2:40724555-40724574 Msa1247590:CDS 40.0%
AGCAGTTGAAGAGAGAAGAA+GGG - chr8_2:40724599-40724618 None:intergenic 40.0%
TGTAGCTGATAGCTGATAAG+CGG + chr8_2:40724762-40724781 Msa1247590:intron 40.0%
GAAAGTGACGTTTACCAAAC+GGG + chr8_2:40725043-40725062 Msa1247590:intron 40.0%
AGTGATTGGCAACACATCAT+TGG - chr8_2:40725286-40725305 None:intergenic 40.0%
CCTTGCCACATCAATTAATG+AGG - chr8_2:40725339-40725358 None:intergenic 40.0%
CCTCATTAATTGATGTGGCA+AGG + chr8_2:40725336-40725355 Msa1247590:intron 40.0%
TTGAAACACTGCAGTCTTGA+CGG + chr8_2:40725639-40725658 Msa1247590:intron 40.0%
TGACGGTGCAATCTATTTGA+AGG + chr8_2:40725656-40725675 Msa1247590:CDS 40.0%
AGTTTCAGCATCTTCAGTGA+AGG - chr8_2:40725705-40725724 None:intergenic 40.0%
CAATTGAGTCCAAAAGGACA+TGG - chr8_2:40725731-40725750 None:intergenic 40.0%
AATTCCTATGTCGGGATAAC+AGG - chr8_2:40725901-40725920 None:intergenic 40.0%
TCCCGACATAGGAATTACAT+TGG + chr8_2:40725905-40725924 Msa1247590:CDS 40.0%
GCCAATGTAATTCCTATGTC+GGG - chr8_2:40725909-40725928 None:intergenic 40.0%
GGCCAATGTAATTCCTATGT+CGG - chr8_2:40725910-40725929 None:intergenic 40.0%
TTCGGAGGTTGTAGAGAATA+GGG - chr8_2:40726007-40726026 None:intergenic 40.0%
! TTGTTGTTGTGTACAAGCAG+TGG + chr8_2:40726165-40726184 Msa1247590:intron 40.0%
! TGATTTAAAACTGCGGTGTG+AGG - chr8_2:40726194-40726213 None:intergenic 40.0%
TCCCATGTTCTTAAAGGTGA+TGG - chr8_2:40726438-40726457 None:intergenic 40.0%
! TTTGGAACTGTTGTTGACTG+TGG - chr8_2:40726462-40726481 None:intergenic 40.0%
TCAAGGATTTGAAGATGAGC+TGG + chr8_2:40726524-40726543 Msa1247590:CDS 40.0%
! AAAGATTAGCCGATGTACCA+AGG + chr8_2:40726646-40726665 Msa1247590:CDS 40.0%
! AAGATTAGCCGATGTACCAA+GGG + chr8_2:40726647-40726666 Msa1247590:CDS 40.0%
TGATGAGAGTTTGCACCTTA+AGG - chr8_2:40726714-40726733 None:intergenic 40.0%
!!! GAGTCCGTTAGCTTTTTTGT+TGG + chr8_2:40726814-40726833 Msa1247590:intron 40.0%
GTAAATGGGTCAGATATTCC+GGG + chr8_2:40727046-40727065 Msa1247590:intron 40.0%
AGGTTAGATTGTGAATGAGG+TGG + chr8_2:40727080-40727099 Msa1247590:intron 40.0%
!! CGTGCCGATATCTTAACTTT+TGG + chr8_2:40727700-40727719 Msa1247590:intron 40.0%
GCATATGTTAGGAACTGGTA+TGG - chr8_2:40727773-40727792 None:intergenic 40.0%
AGTACGCATATGTTAGGAAC+TGG - chr8_2:40727778-40727797 None:intergenic 40.0%
TGATGATTCATGTCCAGAAC+TGG - chr8_2:40728067-40728086 None:intergenic 40.0%
GAACAAAACGACGTCGTCAT+CGG + chr8_2:40724180-40724199 Msa1247590:CDS 45.0%
GCAGAGTATAGAGTCTGGTA+AGG - chr8_2:40724220-40724239 None:intergenic 45.0%
ATGTGGCAGAGTATAGAGTC+TGG - chr8_2:40724225-40724244 None:intergenic 45.0%
!!! ATACGGAGGTTTTGGTTGAG+AGG - chr8_2:40724257-40724276 None:intergenic 45.0%
GAGAGAGATTGTTGATACGG+AGG - chr8_2:40724271-40724290 None:intergenic 45.0%
GTAACAATTGGAGTCGGAGT+CGG - chr8_2:40724346-40724365 None:intergenic 45.0%
AGAGACAGATCAACAAGGTG+GGG - chr8_2:40724537-40724556 None:intergenic 45.0%
GAGAGACAGATCAACAAGGT+GGG - chr8_2:40724538-40724557 None:intergenic 45.0%
TGAGAGACAGATCAACAAGG+TGG - chr8_2:40724539-40724558 None:intergenic 45.0%
TGAAGAGAGAAGAAGGGAAG+AGG - chr8_2:40724593-40724612 None:intergenic 45.0%
GAGCAGTTGAAGAGAGAAGA+AGG - chr8_2:40724600-40724619 None:intergenic 45.0%
TAAGATACCTGAGAGAGACG+AGG - chr8_2:40724626-40724645 None:intergenic 45.0%
! TTGACTCGAAAAGACCCGTT+TGG - chr8_2:40725060-40725079 None:intergenic 45.0%
ATTGATACTACCGCAGACAG+CGG - chr8_2:40725454-40725473 None:intergenic 45.0%
! GAAACTCCACCATGTCCTTT+TGG + chr8_2:40725719-40725738 Msa1247590:CDS 45.0%
TTGAGTCCAAAAGGACATGG+TGG - chr8_2:40725728-40725747 None:intergenic 45.0%
GGGCAACAATTGAGTCCAAA+AGG - chr8_2:40725737-40725756 None:intergenic 45.0%
TCAATTGTTGCCCTTCTCTC+TGG + chr8_2:40725744-40725763 Msa1247590:CDS 45.0%
AATTTCAAACTCTTGGGGGG+AGG - chr8_2:40725837-40725856 None:intergenic 45.0%
GATTCCTGTTATCCCGACAT+AGG + chr8_2:40725894-40725913 Msa1247590:CDS 45.0%
GTTCGGAGGTTGTAGAGAAT+AGG - chr8_2:40726008-40726027 None:intergenic 45.0%
! TTTAAAACTGCGGTGTGAGG+TGG - chr8_2:40726191-40726210 None:intergenic 45.0%
!! TTTGCCTTGTTTCTGGTAGG+AGG + chr8_2:40726410-40726429 Msa1247590:intron 45.0%
TGTGGCTCCCATGTTCTTAA+AGG - chr8_2:40726444-40726463 None:intergenic 45.0%
! AGATTAGCCGATGTACCAAG+GGG + chr8_2:40726648-40726667 Msa1247590:CDS 45.0%
GTTTGCACCTTAAGGAGACA+CGG - chr8_2:40726706-40726725 None:intergenic 45.0%
! CAAACTGGCTCAGATATTCC+GGG - chr8_2:40726861-40726880 None:intergenic 45.0%
! CCAAACTGGCTCAGATATTC+CGG - chr8_2:40726862-40726881 None:intergenic 45.0%
AGATTGTGAATGAGGTGGCT+AGG + chr8_2:40727085-40727104 Msa1247590:intron 45.0%
GATTGTGAATGAGGTGGCTA+GGG + chr8_2:40727086-40727105 Msa1247590:intron 45.0%
TATGGTACCCAGTGCAATAG+GGG - chr8_2:40727755-40727774 None:intergenic 45.0%
GTATGGTACCCAGTGCAATA+GGG - chr8_2:40727756-40727775 None:intergenic 45.0%
!!! TGCTAATTTTGGAGTGGCCT+TGG + chr8_2:40727883-40727902 Msa1247590:intron 45.0%
!!! GCTAATTTTGGAGTGGCCTT+GGG + chr8_2:40727884-40727903 Msa1247590:intron 45.0%
TGATTCCCTTTACTGAGCCT+TGG + chr8_2:40728027-40728046 Msa1247590:intron 45.0%
CATGACCAAGGCTCAGTAAA+GGG - chr8_2:40728035-40728054 None:intergenic 45.0%
TGGAATGACTACCATGACCA+AGG - chr8_2:40728047-40728066 None:intergenic 45.0%
CATGGTAGTCATTCCAGTTC+TGG + chr8_2:40728051-40728070 Msa1247590:intron 45.0%
GTCTGGCTAAGCATACCATT+TGG - chr8_2:40728535-40728554 None:intergenic 45.0%
TGCTTAGCCAGACCTGATTA+TGG + chr8_2:40728542-40728561 Msa1247590:intron 45.0%
TCAGCAAGTTCACAAGTCTC+TGG + chr8_2:40728831-40728850 Msa1247590:three_prime_UTR 45.0%
! AGTTCACAAGTCTCTGGAAG+AGG + chr8_2:40728837-40728856 Msa1247590:three_prime_UTR 45.0%
CGCGGTTTCAGTGACTTCAA+CGG - chr8_2:40724124-40724143 None:intergenic 50.0%
TGAAGTCACTGAAACCGCGA+TGG + chr8_2:40724125-40724144 Msa1247590:exon 50.0%
CGGGTGTTCGCAGTAACAAT+TGG - chr8_2:40724358-40724377 None:intergenic 50.0%
!! GGTGTTGACGAAGGATGCAA+AGG - chr8_2:40724397-40724416 None:intergenic 50.0%
CGAAAGCTGCGTCTCAAATG+TGG + chr8_2:40724447-40724466 Msa1247590:CDS 50.0%
CGGTGAGAGACAGATCAACA+AGG - chr8_2:40724542-40724561 None:intergenic 50.0%
ATACCTGAGAGAGACGAGGT+TGG - chr8_2:40724622-40724641 None:intergenic 50.0%
GCTCTGCAAGTTGTCAAGGA+CGG - chr8_2:40725931-40725950 None:intergenic 50.0%
GCTGCGTCATTCGACATCAA+AGG + chr8_2:40726064-40726083 Msa1247590:CDS 50.0%
GGTTCCTCCTACCAGAAACA+AGG - chr8_2:40726417-40726436 None:intergenic 50.0%
CCGGAATATCTGAGCCAGTT+TGG + chr8_2:40726859-40726878 Msa1247590:intron 50.0%
ATGGGTCAGATATTCCGGGA+CGG + chr8_2:40727050-40727069 Msa1247590:intron 50.0%
TTCTCCTACCCCTATTGCAC+TGG + chr8_2:40727744-40727763 Msa1247590:intron 50.0%
TCTCCTACCCCTATTGCACT+GGG + chr8_2:40727745-40727764 Msa1247590:intron 50.0%
GGTATGGTACCCAGTGCAAT+AGG - chr8_2:40727757-40727776 None:intergenic 50.0%
! TTTGGAGTGGCCTTGGGTAT+TGG + chr8_2:40727890-40727909 Msa1247590:intron 50.0%
CCATGACCAAGGCTCAGTAA+AGG - chr8_2:40728036-40728055 None:intergenic 50.0%
CCTTTACTGAGCCTTGGTCA+TGG + chr8_2:40728033-40728052 Msa1247590:intron 50.0%
TCAAAGCATACAGGAGAGGG+AGG - chr8_2:40728198-40728217 None:intergenic 50.0%
! ATGTTGGCAGTGCGCTTTTC+TGG + chr8_2:40728754-40728773 Msa1247590:intron 50.0%
AGTCACTGAAACCGCGATGG+CGG + chr8_2:40724128-40724147 Msa1247590:exon 55.0%
TTCGAATGTCGCGGGATTCG+CGG - chr8_2:40724431-40724450 None:intergenic 55.0%
ACGCAGCTTTCGAATGTCGC+GGG - chr8_2:40724439-40724458 None:intergenic 55.0%
GACGCAGCTTTCGAATGTCG+CGG - chr8_2:40724440-40724459 None:intergenic 55.0%
! GGGAGGTAGTGGTACACCAT+TGG - chr8_2:40725820-40725839 None:intergenic 55.0%
AAACTCTTGGGGGGAGGTAG+TGG - chr8_2:40725831-40725850 None:intergenic 55.0%
CCACGCTCTGCAAGTTGTCA+AGG - chr8_2:40725935-40725954 None:intergenic 55.0%
CCTTGACAACTTGCAGAGCG+TGG + chr8_2:40725932-40725951 Msa1247590:CDS 55.0%
TGACAACTTGCAGAGCGTGG+TGG + chr8_2:40725935-40725954 Msa1247590:CDS 55.0%
GACAGAGCCCCTTGGTACAT+CGG - chr8_2:40726658-40726677 None:intergenic 55.0%
TTGCATGTGACAGAGCCCCT+TGG - chr8_2:40726666-40726685 None:intergenic 55.0%
GTTAGTTACTCCCTCCGTCC+CGG + chr8_2:40726840-40726859 Msa1247590:intron 55.0%
CTCAGATATTCCGGGACGGA+GGG - chr8_2:40726853-40726872 None:intergenic 55.0%
CTGGCTCAGATATTCCGGGA+CGG - chr8_2:40726857-40726876 None:intergenic 55.0%
GTCAGATATTCCGGGACGGA+GGG + chr8_2:40727054-40727073 Msa1247590:intron 55.0%
GTACCCAGTGCAATAGGGGT+AGG - chr8_2:40727751-40727770 None:intergenic 55.0%
AGCATACAGGAGAGGGAGGA+GGG - chr8_2:40728194-40728213 None:intergenic 55.0%
AAGCATACAGGAGAGGGAGG+AGG - chr8_2:40728195-40728214 None:intergenic 55.0%
! GAGGATTGACTCCGCCATCG+CGG - chr8_2:40724142-40724161 None:intergenic 60.0%
TCTCTCTCGTTTCTCGCCGC+TGG + chr8_2:40724283-40724302 Msa1247590:CDS 60.0%
!! GGCGAAGACGGTGTTGACGA+AGG - chr8_2:40724406-40724425 None:intergenic 60.0%
AATGTCGCGGGATTCGCGGA+GGG - chr8_2:40724427-40724446 None:intergenic 60.0%
GCTCCAACCTCGTCTCTCTC+AGG + chr8_2:40724616-40724635 Msa1247590:CDS 60.0%
TCGGTCGTCGAAGTGGAACC+AGG - chr8_2:40725199-40725218 None:intergenic 60.0%
GGTTCCACTTCGACGACCGA+CGG + chr8_2:40725199-40725218 Msa1247590:intron 60.0%
ACATCCGTCGGTCGTCGAAG+TGG - chr8_2:40725206-40725225 None:intergenic 60.0%
CATGGGGCAGCCAGAGAGAA+GGG - chr8_2:40725757-40725776 None:intergenic 60.0%
GACGCAGCCGTGTCTCCTTA+AGG + chr8_2:40726696-40726715 Msa1247590:CDS 60.0%
GCTCAGATATTCCGGGACGG+AGG - chr8_2:40726854-40726873 None:intergenic 60.0%
GGTCAGATATTCCGGGACGG+AGG + chr8_2:40727053-40727072 Msa1247590:intron 60.0%
TATTCCGGGACGGAGGGAGT+AGG + chr8_2:40727060-40727079 Msa1247590:intron 60.0%
CTAACCTACTCCCTCCGTCC+CGG - chr8_2:40727067-40727086 None:intergenic 60.0%
GGGGGGGAAGAGAAGGGAAA+AGG - chr8_2:40728174-40728193 None:intergenic 60.0%
ATACAGGAGAGGGAGGAGGG+GGG - chr8_2:40728191-40728210 None:intergenic 60.0%
CATACAGGAGAGGGAGGAGG+GGG - chr8_2:40728192-40728211 None:intergenic 60.0%
GCATACAGGAGAGGGAGGAG+GGG - chr8_2:40728193-40728212 None:intergenic 60.0%
GCTTCCAGAGATGGCGCCAG+CGG - chr8_2:40724302-40724321 None:intergenic 65.0%
GGATTCGCGGAGGGCGAAGA+CGG - chr8_2:40724418-40724437 None:intergenic 65.0%
GAATGTCGCGGGATTCGCGG+AGG - chr8_2:40724428-40724447 None:intergenic 65.0%
GCATGGGGCAGCCAGAGAGA+AGG - chr8_2:40725758-40725777 None:intergenic 65.0%
GGAGGAGGGGGGGAAGAGAA+GGG - chr8_2:40728180-40728199 None:intergenic 65.0%
TACAGGAGAGGGAGGAGGGG+GGG - chr8_2:40728190-40728209 None:intergenic 65.0%
GGGAGGAGGGGGGGAAGAGA+AGG - chr8_2:40728181-40728200 None:intergenic 70.0%
CTCGCCGCTGGCGCCATCTC+TGG + chr8_2:40724295-40724314 Msa1247590:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 40724098 40729034 40724098 ID=Msa1247590;Name=Msa1247590
chr8_2 mRNA 40724098 40729034 40724098 ID=Msa1247590-mRNA-1;Parent=Msa1247590;Name=Msa1247590-mRNA-1;_AED=0.36;_eAED=0.36;_QI=46|1|1|1|0.75|0.6|5|272|454
chr8_2 exon 40724098 40724637 40724098 ID=Msa1247590-mRNA-1:exon:12427;Parent=Msa1247590-mRNA-1
chr8_2 exon 40725653 40726085 40725653 ID=Msa1247590-mRNA-1:exon:12428;Parent=Msa1247590-mRNA-1
chr8_2 exon 40726185 40726334 40726185 ID=Msa1247590-mRNA-1:exon:12429;Parent=Msa1247590-mRNA-1
chr8_2 exon 40726429 40726717 40726429 ID=Msa1247590-mRNA-1:exon:12430;Parent=Msa1247590-mRNA-1
chr8_2 exon 40728764 40729034 40728764 ID=Msa1247590-mRNA-1:exon:12431;Parent=Msa1247590-mRNA-1
chr8_2 five_prime_UTR 40724098 40724143 40724098 ID=Msa1247590-mRNA-1:five_prime_utr;Parent=Msa1247590-mRNA-1
chr8_2 CDS 40724144 40724637 40724144 ID=Msa1247590-mRNA-1:cds;Parent=Msa1247590-mRNA-1
chr8_2 CDS 40725653 40726085 40725653 ID=Msa1247590-mRNA-1:cds;Parent=Msa1247590-mRNA-1
chr8_2 CDS 40726185 40726334 40726185 ID=Msa1247590-mRNA-1:cds;Parent=Msa1247590-mRNA-1
chr8_2 CDS 40726429 40726716 40726429 ID=Msa1247590-mRNA-1:cds;Parent=Msa1247590-mRNA-1
chr8_2 three_prime_UTR 40726717 40726717 40726717 ID=Msa1247590-mRNA-1:three_prime_utr;Parent=Msa1247590-mRNA-1
chr8_2 three_prime_UTR 40728764 40729034 40728764 ID=Msa1247590-mRNA-1:three_prime_utr;Parent=Msa1247590-mRNA-1
Gene Sequence

>Msa1247590

ATGGCGGAGTCAATCCTCAAACTCCAAAAAGCAGAAGAACAAAACGACGTCGTCATCGGTGATATCATAAGCACCTTACCAGACTCTATACTCTGCCACATCCTTTCATTCCTCTCAACCAAAACCTCCGTATCAACAATCTCTCTCGTTTCTCGCCGCTGGCGCCATCTCTGGAAGCATCTTCAATCATTCAACTTCTCCGACTCCGACTCCAATTGTTACTGCGAACACCCGCAACAACTCTTCAAAACCTTTGCATCCTTCGTCAACACCGTCTTCGCCCTCCGCGAATCCCGCGACATTCGAAAGCTGCGTCTCAAATGTGGCATTGCAGATGATGACATGTTTCTGGCTAATTGCATTGATATGTGGCTCAATGCTGTTAATGGACCCCACCTTGTTGATCTGTCTCTCACCGTTTTTAACTGTCATGGTTACACTAACTTCCTCTTCCCTTCTTCTCTCTTCAACTGCTCCAACCTCGTCTCTCTCAGTCTTGACGGTGCAATCTATTTGAAGGTTCAAGATTCTTCCGTTTATTTTCCTTCACTGAAGATGCTGAAACTCCACCATGTCCTTTTGGACTCAATTGTTGCCCTTCTCTCTGGCTGCCCCATGCTCGAAACTTTTGATATTGACTTTATCACCACATCTTTTACCAATGGTGTACCACTACCTCCCCCCAAGAGTTTGAAATTTACCAATAACAATTTCACTTGGACTTACATTGAAGTAGATTCCTGTTATCCCGACATAGGAATTACATTGGCCGTCCTTGACAACTTGCAGAGCGTGGTGGAATCATATCTTGACGTCTTTTCCCCATCTGAAAATAAATTTGTTGACCCTATTCTCTACAACCTCCGAACTAGAGATATATATGAAGAAAGAGAAACATTTATGCGGCTGCGTCATTCGACATCAAAGTGGCCACCTCACACCGCAGTTTTAAATCATCCAGAATTTTGCAATTTACATCATCTAAAGTTGATTCTACCCTGCTTTAACTCGAATCTTTTGCTCAACATGCTTGAGAAATGCCATATGCTTCAAGTTCTCATAAGTCAGAGCAATAAGGAGGAACCATCACCTTTAAGAACATGGGAGCCACAGTCAACAACAGTTCCAAAATGTCTTGAATCTCACCTGACTTATGTTCACATAGAAGGATATCAAGGATTTGAAGATGAGCTGGCATTTGTTGAATATATTTTGCAGAACGGACTTGTTTTGAAGACAATGCTTATTTTTGTTGATATTTCAATGGACATAACAAAAAAGTATTGTTCTCTCAAAAGATTAGCCGATGTACCAAGGGGCTCTGTCACATGCAAACTTAAATTCGACGCAGCCGTGTCTCCTTAA
Protein sequence

>Msa1247590

MAESILKLQKAEEQNDVVIGDIISTLPDSILCHILSFLSTKTSVSTISLVSRRWRHLWKHLQSFNFSDSDSNCYCEHPQQLFKTFASFVNTVFALRESRDIRKLRLKCGIADDDMFLANCIDMWLNAVNGPHLVDLSLTVFNCHGYTNFLFPSSLFNCSNLVSLSLDGAIYLKVQDSSVYFPSLKMLKLHHVLLDSIVALLSGCPMLETFDIDFITTSFTNGVPLPPPKSLKFTNNNFTWTYIEVDSCYPDIGITLAVLDNLQSVVESYLDVFSPSENKFVDPILYNLRTRDIYEERETFMRLRHSTSKWPPHTAVLNHPEFCNLHHLKLILPCFNSNLLLNMLEKCHMLQVLISQSNKEEPSPLRTWEPQSTTVPKCLESHLTYVHIEGYQGFEDELAFVEYILQNGLVLKTMLIFVDISMDITKKYCSLKRLADVPRGSVTCKLKFDAAVSP*