AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1252610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252610 MtrunA17_Chr8g0368861 95.000 120 6 0 1 120 1 120 2.65e-78 226
Msa1252610 MtrunA17_Chr8g0368831 94.167 120 7 0 1 120 9 128 1.22e-77 224
Msa1252610 MtrunA17_Chr7g0240471 51.515 99 46 2 23 120 20 117 1.23e-26 95.5
Msa1252610 MtrunA17_Chr7g0240451 51.579 95 44 2 27 120 24 117 5.45e-25 91.3
Msa1252610 MtrunA17_Chr7g0240441 57.407 54 22 1 63 116 38 90 2.17e-14 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1252610 AT2G37870.1 67.797 118 35 1 3 120 1 115 1.70e-50 156
Msa1252610 AT5G05960.1 45.902 122 58 3 1 120 1 116 2.69e-29 102
Msa1252610 AT3G53980.2 46.809 94 49 1 27 120 22 114 2.10e-27 97.8
Msa1252610 AT3G53980.1 46.809 94 49 1 27 120 22 114 2.10e-27 97.8

Find 34 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCATCAAGTGTGTTAATTT+TGG 0.223634 8_2:+49589977 Msa1252610:CDS
GTGAGACTATATTTCTCATT+TGG 0.323970 8_2:-49591381 None:intergenic
TTAATTCAATTAAATTATAA+TGG 0.325426 8_2:-49591254 None:intergenic
AGCTAGTCTAAGTCCATGTT+TGG 0.350440 8_2:+49590049 Msa1252610:CDS
AATTAAATTATAATGGAAGT+TGG 0.376374 8_2:-49591247 None:intergenic
ATGTGATATGCAGTATTTAA+CGG 0.377997 8_2:+49591074 Msa1252610:three_prime_UTR
TTCCTAATGTTGCATCTCTT+AGG 0.378053 8_2:-49590224 None:intergenic
GTGACTAACTAGTTTGTATA+TGG 0.382759 8_2:-49589861 None:intergenic
TGGGTGCTGTACGTAATGTT+AGG 0.392658 8_2:+49590069 Msa1252610:CDS
GAATGTGGAAGGACACCAAT+TGG 0.434211 8_2:+49590017 Msa1252610:CDS
AACAATAGTGATGGAGTTCA+AGG 0.437224 8_2:+49589917 Msa1252610:exon
AGAACAGAACAAAGACATCT+TGG 0.469439 8_2:-49590146 None:intergenic
CTTCCACATTTCTTGCCAGC+AGG 0.471841 8_2:-49590251 None:intergenic
CCAACTCTAGCACAACAAAC+TGG 0.478057 8_2:-49590104 None:intergenic
CTAGCTGCTGCTGACCCAAT+TGG 0.492373 8_2:-49590032 None:intergenic
TTCCTAAGAGATGCAACATT+AGG 0.493031 8_2:+49590222 Msa1252610:CDS
TTTATGAGTGTATTGTTGCA+TGG 0.506372 8_2:+49591175 Msa1252610:three_prime_UTR
GGGTGCTGTACGTAATGTTA+GGG 0.506383 8_2:+49590070 Msa1252610:CDS
CCAGTTTGTTGTGCTAGAGT+TGG 0.508251 8_2:+49590104 Msa1252610:CDS
GCTGAGGCAGCTGGAGAATG+TGG 0.520830 8_2:+49590002 Msa1252610:CDS
AATGTGGAAGGACACCAATT+GGG 0.523864 8_2:+49590018 Msa1252610:CDS
AACATTAGGAACCGACCTGC+TGG 0.528203 8_2:+49590236 Msa1252610:CDS
GCTAGTCTAAGTCCATGTTT+GGG 0.544347 8_2:+49590050 Msa1252610:CDS
AGTTGGAGAAAATAACAGTA+AGG 0.551063 8_2:-49591230 None:intergenic
CACATTTCTTGCCAGCAGGT+CGG 0.552674 8_2:-49590247 None:intergenic
CGACCTGCTGGCAAGAAATG+TGG 0.566135 8_2:+49590248 Msa1252610:CDS
GGAACAGTGATAGCAATAGC+AGG 0.582273 8_2:-49590203 None:intergenic
TAGAACTTTCCTAGCCATAG+TGG 0.583702 8_2:+49589941 Msa1252610:CDS
CACTTCCTTGAAACCAAAGC+AGG 0.584628 8_2:+49591041 Msa1252610:exon
GCTAAATAAATTCTGTAACA+TGG 0.587936 8_2:+49591105 Msa1252610:three_prime_UTR
AAAACATCACCACTATGGCT+AGG 0.592042 8_2:-49589950 None:intergenic
TTACGTACAGCACCCAAACA+TGG 0.602239 8_2:-49590062 None:intergenic
AGGCAGCTGGAGAATGTGGA+AGG 0.609221 8_2:+49590006 Msa1252610:CDS
ACTCTAGCACAACAAACTGG+TGG 0.633479 8_2:-49590101 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGCAAAAAAAAAAAAAAA+AGG - chr8_2:49591011-49591030 None:intergenic 10.0%
!! AAAGCAAAAAAAAAAAAAAA+AGG - chr8_2:49591011-49591030 None:intergenic 10.0%
!!! AGAAAATGTCATTTTTTTTT+TGG - chr8_2:49590836-49590855 None:intergenic 15.0%
!!! TTTTTTTTTTTTTGCTTTAC+AGG + chr8_2:49591013-49591032 Msa1252610:intron 15.0%
!!! TTTTTTTTTTTTGCTTTACA+GGG + chr8_2:49591014-49591033 Msa1252610:intron 15.0%
!!! AATTAAATTATAATGGAAGT+TGG - chr8_2:49591250-49591269 None:intergenic 15.0%
!!! AGAAAATGTCATTTTTTTTT+TGG - chr8_2:49590836-49590855 None:intergenic 15.0%
!!! TTTTTTTTTTTTTGCTTTAC+AGG + chr8_2:49591013-49591032 Msa1252610:intron 15.0%
!!! TTTTTTTTTTTTGCTTTACA+GGG + chr8_2:49591014-49591033 Msa1252610:intron 15.0%
!!! AATTAAATTATAATGGAAGT+TGG - chr8_2:49591250-49591269 None:intergenic 15.0%
!! CAAAAATATGAATCAATGAA+AGG - chr8_2:49590584-49590603 None:intergenic 20.0%
!!! CTTTCATTGATTCATATTTT+TGG + chr8_2:49590582-49590601 Msa1252610:intron 20.0%
!! CAAAAATATGAATCAATGAA+AGG - chr8_2:49590584-49590603 None:intergenic 20.0%
!!! CTTTCATTGATTCATATTTT+TGG + chr8_2:49590582-49590601 Msa1252610:intron 20.0%
! ATTCTCAAAAACAATAGTGA+TGG + chr8_2:49589908-49589927 Msa1252610:exon 25.0%
! AAATGTACTAAATGTCTGTT+TGG - chr8_2:49590462-49590481 None:intergenic 25.0%
!!! TTAAGGTGTTTTCAAAACTA+AGG - chr8_2:49590561-49590580 None:intergenic 25.0%
! TATGAATCAATGAAAGGTTA+AGG - chr8_2:49590578-49590597 None:intergenic 25.0%
! AGAGTTTGTAAAACTAAAAC+AGG + chr8_2:49590618-49590637 Msa1252610:intron 25.0%
!! CATATATTATTTTCCTGCTT+TGG - chr8_2:49591057-49591076 None:intergenic 25.0%
! ATGTGATATGCAGTATTTAA+CGG + chr8_2:49591074-49591093 Msa1252610:three_prime_UTR 25.0%
! GCTAAATAAATTCTGTAACA+TGG + chr8_2:49591105-49591124 Msa1252610:three_prime_UTR 25.0%
! TCATAAAAACAAAATGCTAC+AGG - chr8_2:49591162-49591181 None:intergenic 25.0%
! TGTACGACTAAAAAATTTGT+CGG + chr8_2:49591311-49591330 Msa1252610:three_prime_UTR 25.0%
! ATTCTCAAAAACAATAGTGA+TGG + chr8_2:49589908-49589927 Msa1252610:exon 25.0%
! AAATGTACTAAATGTCTGTT+TGG - chr8_2:49590462-49590481 None:intergenic 25.0%
!!! TTAAGGTGTTTTCAAAACTA+AGG - chr8_2:49590561-49590580 None:intergenic 25.0%
! TATGAATCAATGAAAGGTTA+AGG - chr8_2:49590578-49590597 None:intergenic 25.0%
! AGAGTTTGTAAAACTAAAAC+AGG + chr8_2:49590618-49590637 Msa1252610:intron 25.0%
!! CATATATTATTTTCCTGCTT+TGG - chr8_2:49591057-49591076 None:intergenic 25.0%
! ATGTGATATGCAGTATTTAA+CGG + chr8_2:49591074-49591093 Msa1252610:three_prime_UTR 25.0%
! GCTAAATAAATTCTGTAACA+TGG + chr8_2:49591105-49591124 Msa1252610:three_prime_UTR 25.0%
! TCATAAAAACAAAATGCTAC+AGG - chr8_2:49591162-49591181 None:intergenic 25.0%
! TGTACGACTAAAAAATTTGT+CGG + chr8_2:49591311-49591330 Msa1252610:three_prime_UTR 25.0%
! GTGACTAACTAGTTTGTATA+TGG - chr8_2:49589864-49589883 None:intergenic 30.0%
CAAAAAAAACATCACCACTA+TGG - chr8_2:49589958-49589977 None:intergenic 30.0%
!!! CATAGTGGTGATGTTTTTTT+TGG + chr8_2:49589956-49589975 Msa1252610:CDS 30.0%
TACAACTAGTAGCTTCATAT+TGG - chr8_2:49590386-49590405 None:intergenic 30.0%
TTATCATTTCTCACATTCCA+AGG - chr8_2:49590426-49590445 None:intergenic 30.0%
! GTTTGAAATAGTAAGACGTA+AGG + chr8_2:49590492-49590511 Msa1252610:intron 30.0%
!!! TTTTTTGGTCTTAGATGAAG+TGG - chr8_2:49590821-49590840 None:intergenic 30.0%
TTTATGAGTGTATTGTTGCA+TGG + chr8_2:49591175-49591194 Msa1252610:three_prime_UTR 30.0%
AGTTGGAGAAAATAACAGTA+AGG - chr8_2:49591233-49591252 None:intergenic 30.0%
! GTGACTAACTAGTTTGTATA+TGG - chr8_2:49589864-49589883 None:intergenic 30.0%
CAAAAAAAACATCACCACTA+TGG - chr8_2:49589958-49589977 None:intergenic 30.0%
!!! CATAGTGGTGATGTTTTTTT+TGG + chr8_2:49589956-49589975 Msa1252610:CDS 30.0%
TACAACTAGTAGCTTCATAT+TGG - chr8_2:49590386-49590405 None:intergenic 30.0%
TTATCATTTCTCACATTCCA+AGG - chr8_2:49590426-49590445 None:intergenic 30.0%
! GTTTGAAATAGTAAGACGTA+AGG + chr8_2:49590492-49590511 Msa1252610:intron 30.0%
!!! TTTTTTGGTCTTAGATGAAG+TGG - chr8_2:49590821-49590840 None:intergenic 30.0%
TTTATGAGTGTATTGTTGCA+TGG + chr8_2:49591175-49591194 Msa1252610:three_prime_UTR 30.0%
AGTTGGAGAAAATAACAGTA+AGG - chr8_2:49591233-49591252 None:intergenic 30.0%
! AACAATAGTGATGGAGTTCA+AGG + chr8_2:49589917-49589936 Msa1252610:exon 35.0%
! GGCATCAAGTGTGTTAATTT+TGG + chr8_2:49589977-49589996 Msa1252610:CDS 35.0%
!! TGTGTTAATTTTGGAAGCTG+AGG + chr8_2:49589986-49590005 Msa1252610:CDS 35.0%
AGAACAGAACAAAGACATCT+TGG - chr8_2:49590149-49590168 None:intergenic 35.0%
! TTCTGTTCTTTTGTCACCTA+TGG + chr8_2:49590160-49590179 Msa1252610:CDS 35.0%
!!! ATCTTAGCTTGTTTTGCCAT+AGG - chr8_2:49590179-49590198 None:intergenic 35.0%
TTCCTAAGAGATGCAACATT+AGG + chr8_2:49590222-49590241 Msa1252610:CDS 35.0%
TTCCTAATGTTGCATCTCTT+AGG - chr8_2:49590227-49590246 None:intergenic 35.0%
GACGTACAATAAAGAATGTG+CGG - chr8_2:49590364-49590383 None:intergenic 35.0%
! AGGTGTTTTCAAAACTAAGG+TGG - chr8_2:49590558-49590577 None:intergenic 35.0%
TGGCAAATACTGAAATTGCA+AGG + chr8_2:49590726-49590745 Msa1252610:intron 35.0%
AAATACTGAAATTGCAAGGC+CGG + chr8_2:49590730-49590749 Msa1252610:intron 35.0%
! GTGTGTGAGTTTAATTTCAG+TGG + chr8_2:49590791-49590810 Msa1252610:intron 35.0%
TATGTTCTGTTTGTGTCAAG+TGG - chr8_2:49590871-49590890 None:intergenic 35.0%
!! ATTTTCCTGCTTTGGTTTCA+AGG - chr8_2:49591049-49591068 None:intergenic 35.0%
! GTAACATGGCATTTTCTACT+TGG + chr8_2:49591119-49591138 Msa1252610:three_prime_UTR 35.0%
! AACAATAGTGATGGAGTTCA+AGG + chr8_2:49589917-49589936 Msa1252610:exon 35.0%
! GGCATCAAGTGTGTTAATTT+TGG + chr8_2:49589977-49589996 Msa1252610:CDS 35.0%
!! TGTGTTAATTTTGGAAGCTG+AGG + chr8_2:49589986-49590005 Msa1252610:CDS 35.0%
AGAACAGAACAAAGACATCT+TGG - chr8_2:49590149-49590168 None:intergenic 35.0%
! TTCTGTTCTTTTGTCACCTA+TGG + chr8_2:49590160-49590179 Msa1252610:CDS 35.0%
!!! ATCTTAGCTTGTTTTGCCAT+AGG - chr8_2:49590179-49590198 None:intergenic 35.0%
TTCCTAAGAGATGCAACATT+AGG + chr8_2:49590222-49590241 Msa1252610:CDS 35.0%
TTCCTAATGTTGCATCTCTT+AGG - chr8_2:49590227-49590246 None:intergenic 35.0%
GACGTACAATAAAGAATGTG+CGG - chr8_2:49590364-49590383 None:intergenic 35.0%
! AGGTGTTTTCAAAACTAAGG+TGG - chr8_2:49590558-49590577 None:intergenic 35.0%
TGGCAAATACTGAAATTGCA+AGG + chr8_2:49590726-49590745 Msa1252610:intron 35.0%
AAATACTGAAATTGCAAGGC+CGG + chr8_2:49590730-49590749 Msa1252610:intron 35.0%
! GTGTGTGAGTTTAATTTCAG+TGG + chr8_2:49590791-49590810 Msa1252610:intron 35.0%
TATGTTCTGTTTGTGTCAAG+TGG - chr8_2:49590871-49590890 None:intergenic 35.0%
!! ATTTTCCTGCTTTGGTTTCA+AGG - chr8_2:49591049-49591068 None:intergenic 35.0%
! GTAACATGGCATTTTCTACT+TGG + chr8_2:49591119-49591138 Msa1252610:three_prime_UTR 35.0%
TAGAACTTTCCTAGCCATAG+TGG + chr8_2:49589941-49589960 Msa1252610:CDS 40.0%
AAAACATCACCACTATGGCT+AGG - chr8_2:49589953-49589972 None:intergenic 40.0%
AATGTGGAAGGACACCAATT+GGG + chr8_2:49590018-49590037 Msa1252610:CDS 40.0%
! AGCTAGTCTAAGTCCATGTT+TGG + chr8_2:49590049-49590068 Msa1252610:CDS 40.0%
! GCTAGTCTAAGTCCATGTTT+GGG + chr8_2:49590050-49590069 Msa1252610:CDS 40.0%
AAGGTCAAACTAAAGCCGAT+AGG + chr8_2:49590511-49590530 Msa1252610:intron 40.0%
AATGTCGACACTACACCTAT+CGG - chr8_2:49590529-49590548 None:intergenic 40.0%
TAAACTCACACACAACTGTG+AGG - chr8_2:49590784-49590803 None:intergenic 40.0%
ATGTGCGCATTTGCAAAACT+TGG + chr8_2:49590890-49590909 Msa1252610:intron 40.0%
TAGAACTTTCCTAGCCATAG+TGG + chr8_2:49589941-49589960 Msa1252610:CDS 40.0%
AAAACATCACCACTATGGCT+AGG - chr8_2:49589953-49589972 None:intergenic 40.0%
AATGTGGAAGGACACCAATT+GGG + chr8_2:49590018-49590037 Msa1252610:CDS 40.0%
! AGCTAGTCTAAGTCCATGTT+TGG + chr8_2:49590049-49590068 Msa1252610:CDS 40.0%
! GCTAGTCTAAGTCCATGTTT+GGG + chr8_2:49590050-49590069 Msa1252610:CDS 40.0%
AAGGTCAAACTAAAGCCGAT+AGG + chr8_2:49590511-49590530 Msa1252610:intron 40.0%
AATGTCGACACTACACCTAT+CGG - chr8_2:49590529-49590548 None:intergenic 40.0%
TAAACTCACACACAACTGTG+AGG - chr8_2:49590784-49590803 None:intergenic 40.0%
ATGTGCGCATTTGCAAAACT+TGG + chr8_2:49590890-49590909 Msa1252610:intron 40.0%
GAATGTGGAAGGACACCAAT+TGG + chr8_2:49590017-49590036 Msa1252610:CDS 45.0%
TTACGTACAGCACCCAAACA+TGG - chr8_2:49590065-49590084 None:intergenic 45.0%
! TGGGTGCTGTACGTAATGTT+AGG + chr8_2:49590069-49590088 Msa1252610:CDS 45.0%
! GGGTGCTGTACGTAATGTTA+GGG + chr8_2:49590070-49590089 Msa1252610:CDS 45.0%
ACTCTAGCACAACAAACTGG+TGG - chr8_2:49590104-49590123 None:intergenic 45.0%
CCAACTCTAGCACAACAAAC+TGG - chr8_2:49590107-49590126 None:intergenic 45.0%
!! CCAGTTTGTTGTGCTAGAGT+TGG + chr8_2:49590104-49590123 Msa1252610:CDS 45.0%
GGAACAGTGATAGCAATAGC+AGG - chr8_2:49590206-49590225 None:intergenic 45.0%
TCTAGAAGTCCAAGCTCAAC+TGG + chr8_2:49590706-49590725 Msa1252610:intron 45.0%
CAGTATTTGCCAGTTGAGCT+TGG - chr8_2:49590718-49590737 None:intergenic 45.0%
CACTTCCTTGAAACCAAAGC+AGG + chr8_2:49591041-49591060 Msa1252610:exon 45.0%
GAATGTGGAAGGACACCAAT+TGG + chr8_2:49590017-49590036 Msa1252610:CDS 45.0%
TTACGTACAGCACCCAAACA+TGG - chr8_2:49590065-49590084 None:intergenic 45.0%
! TGGGTGCTGTACGTAATGTT+AGG + chr8_2:49590069-49590088 Msa1252610:CDS 45.0%
! GGGTGCTGTACGTAATGTTA+GGG + chr8_2:49590070-49590089 Msa1252610:CDS 45.0%
ACTCTAGCACAACAAACTGG+TGG - chr8_2:49590104-49590123 None:intergenic 45.0%
CCAACTCTAGCACAACAAAC+TGG - chr8_2:49590107-49590126 None:intergenic 45.0%
!! CCAGTTTGTTGTGCTAGAGT+TGG + chr8_2:49590104-49590123 Msa1252610:CDS 45.0%
GGAACAGTGATAGCAATAGC+AGG - chr8_2:49590206-49590225 None:intergenic 45.0%
TCTAGAAGTCCAAGCTCAAC+TGG + chr8_2:49590706-49590725 Msa1252610:intron 45.0%
CAGTATTTGCCAGTTGAGCT+TGG - chr8_2:49590718-49590737 None:intergenic 45.0%
CACTTCCTTGAAACCAAAGC+AGG + chr8_2:49591041-49591060 Msa1252610:exon 45.0%
!! TTAATTCAATTAAATTATAA+TGG - chr8_2:49591257-49591276 None:intergenic 5.0%
!! TTAATTCAATTAAATTATAA+TGG - chr8_2:49591257-49591276 None:intergenic 5.0%
!! ATTTTGGAAGCTGAGGCAGC+TGG + chr8_2:49589993-49590012 Msa1252610:CDS 50.0%
AACATTAGGAACCGACCTGC+TGG + chr8_2:49590236-49590255 Msa1252610:CDS 50.0%
CACATTTCTTGCCAGCAGGT+CGG - chr8_2:49590250-49590269 None:intergenic 50.0%
CTTCCACATTTCTTGCCAGC+AGG - chr8_2:49590254-49590273 None:intergenic 50.0%
ACTTGTGTCGCAAGTAGCCT+TGG + chr8_2:49590406-49590425 Msa1252610:intron 50.0%
!! ATTTTGGAAGCTGAGGCAGC+TGG + chr8_2:49589993-49590012 Msa1252610:CDS 50.0%
AACATTAGGAACCGACCTGC+TGG + chr8_2:49590236-49590255 Msa1252610:CDS 50.0%
CACATTTCTTGCCAGCAGGT+CGG - chr8_2:49590250-49590269 None:intergenic 50.0%
CTTCCACATTTCTTGCCAGC+AGG - chr8_2:49590254-49590273 None:intergenic 50.0%
ACTTGTGTCGCAAGTAGCCT+TGG + chr8_2:49590406-49590425 Msa1252610:intron 50.0%
AGGCAGCTGGAGAATGTGGA+AGG + chr8_2:49590006-49590025 Msa1252610:CDS 55.0%
CTAGCTGCTGCTGACCCAAT+TGG - chr8_2:49590035-49590054 None:intergenic 55.0%
CGACCTGCTGGCAAGAAATG+TGG + chr8_2:49590248-49590267 Msa1252610:CDS 55.0%
ACACACAACTGTGAGGTCCC+GGG - chr8_2:49590777-49590796 None:intergenic 55.0%
CACACACAACTGTGAGGTCC+CGG - chr8_2:49590778-49590797 None:intergenic 55.0%
AGGCAGCTGGAGAATGTGGA+AGG + chr8_2:49590006-49590025 Msa1252610:CDS 55.0%
CTAGCTGCTGCTGACCCAAT+TGG - chr8_2:49590035-49590054 None:intergenic 55.0%
CGACCTGCTGGCAAGAAATG+TGG + chr8_2:49590248-49590267 Msa1252610:CDS 55.0%
ACACACAACTGTGAGGTCCC+GGG - chr8_2:49590777-49590796 None:intergenic 55.0%
CACACACAACTGTGAGGTCC+CGG - chr8_2:49590778-49590797 None:intergenic 55.0%
GCTGAGGCAGCTGGAGAATG+TGG + chr8_2:49590002-49590021 Msa1252610:CDS 60.0%
GCTGAGGCAGCTGGAGAATG+TGG + chr8_2:49590002-49590021 Msa1252610:CDS 60.0%
TCGTGACCCGGGTTCGAACC+CGG + chr8_2:49590756-49590775 Msa1252610:intron 65.0%
TGAGGTCCCGGGTTCGAACC+CGG - chr8_2:49590766-49590785 None:intergenic 65.0%
TCGTGACCCGGGTTCGAACC+CGG + chr8_2:49590756-49590775 Msa1252610:intron 65.0%
TGAGGTCCCGGGTTCGAACC+CGG - chr8_2:49590766-49590785 None:intergenic 65.0%
CAAGGCCGGACGTCGTGACC+CGG + chr8_2:49590744-49590763 Msa1252610:intron 70.0%
AAGGCCGGACGTCGTGACCC+GGG + chr8_2:49590745-49590764 Msa1252610:intron 70.0%
CGAACCCGGGTCACGACGTC+CGG - chr8_2:49590752-49590771 None:intergenic 70.0%
CGTGACCCGGGTTCGAACCC+GGG + chr8_2:49590757-49590776 Msa1252610:intron 70.0%
GAGGTCCCGGGTTCGAACCC+GGG - chr8_2:49590765-49590784 None:intergenic 70.0%
CAAGGCCGGACGTCGTGACC+CGG + chr8_2:49590744-49590763 Msa1252610:intron 70.0%
AAGGCCGGACGTCGTGACCC+GGG + chr8_2:49590745-49590764 Msa1252610:intron 70.0%
CGAACCCGGGTCACGACGTC+CGG - chr8_2:49590752-49590771 None:intergenic 70.0%
CGTGACCCGGGTTCGAACCC+GGG + chr8_2:49590757-49590776 Msa1252610:intron 70.0%
GAGGTCCCGGGTTCGAACCC+GGG - chr8_2:49590765-49590784 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 49589855 49591395 49589855 ID=Msa1252610;Name=Msa1252610
chr8_2 mRNA 49589855 49591395 49589855 ID=Msa1252610-mRNA-1;Parent=Msa1252610;Name=Msa1252610-mRNA-1;_AED=0.00;_eAED=0.00;_QI=72|1|1|1|0|0|2|344|120
chr8_2 exon 49589855 49590272 49589855 ID=Msa1252610-mRNA-1:exon:15063;Parent=Msa1252610-mRNA-1
chr8_2 exon 49591035 49591395 49591035 ID=Msa1252610-mRNA-1:exon:15064;Parent=Msa1252610-mRNA-1
chr8_2 five_prime_UTR 49589855 49589926 49589855 ID=Msa1252610-mRNA-1:five_prime_utr;Parent=Msa1252610-mRNA-1
chr8_2 CDS 49589927 49590272 49589927 ID=Msa1252610-mRNA-1:cds;Parent=Msa1252610-mRNA-1
chr8_2 CDS 49591035 49591051 49591035 ID=Msa1252610-mRNA-1:cds;Parent=Msa1252610-mRNA-1
chr8_2 three_prime_UTR 49591052 49591395 49591052 ID=Msa1252610-mRNA-1:three_prime_utr;Parent=Msa1252610-mRNA-1
Gene Sequence

>Msa1252610

ATGGAGTTCAAGGTTAGAACTTTCCTAGCCATAGTGGTGATGTTTTTTTTGGCATCAAGTGTGTTAATTTTGGAAGCTGAGGCAGCTGGAGAATGTGGAAGGACACCAATTGGGTCAGCAGCAGCTAGTCTAAGTCCATGTTTGGGTGCTGTACGTAATGTTAGGGCAAAAGTTCCACCAGTTTGTTGTGCTAGAGTTGGTGCTTTGATTAGAACTTCTCCAAGATGTCTTTGTTCTGTTCTTTTGTCACCTATGGCAAAACAAGCTAAGATTAATCCTGCTATTGCTATCACTGTTCCTAAGAGATGCAACATTAGGAACCGACCTGCTGGCAAGAAATGTGGAAGGTACACACTTCCTTGA
Protein sequence

>Msa1252610

MEFKVRTFLAIVVMFFLASSVLILEAEAAGECGRTPIGSAAASLSPCLGAVRNVRAKVPPVCCARVGALIRTSPRCLCSVLLSPMAKQAKINPAIAITVPKRCNIRNRPAGKKCGRYTLP*