Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254230 | XP_003629164.1 | 89.183 | 416 | 0 | 2 | 1 | 416 | 1 | 371 | 0.0 | 737 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254230 | sp|Q8LFC0|IDH1_ARATH | 75.845 | 414 | 52 | 3 | 3 | 416 | 2 | 367 | 0.0 | 616 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254230 | G7L9H2 | 89.183 | 416 | 0 | 2 | 1 | 416 | 1 | 371 | 0.0 | 737 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0709400 | Msa1254230 | -0.818639 | 1.764438e-52 | -8.615850e-47 |
| Msa0194950 | Msa1254230 | 0.822127 | 2.797258e-53 | -8.615850e-47 |
| Msa0315440 | Msa1254230 | 0.812576 | 3.954183e-51 | -8.615850e-47 |
| Msa1124960 | Msa1254230 | -0.807215 | 5.636026e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254230 | MtrunA17_Chr8g0370691 | 89.183 | 416 | 0 | 2 | 1 | 416 | 1 | 371 | 0.0 | 737 |
| Msa1254230 | MtrunA17_Chr5g0406691 | 79.327 | 416 | 37 | 3 | 1 | 416 | 1 | 367 | 0.0 | 650 |
| Msa1254230 | MtrunA17_Chr1g0181081 | 46.272 | 389 | 154 | 7 | 34 | 415 | 18 | 358 | 2.67e-108 | 323 |
| Msa1254230 | MtrunA17_Chr3g0133741 | 45.669 | 381 | 154 | 5 | 40 | 415 | 21 | 353 | 1.13e-107 | 321 |
| Msa1254230 | MtrunA17_Chr2g0333571 | 27.251 | 411 | 216 | 18 | 17 | 398 | 18 | 374 | 1.59e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254230 | AT4G35260.1 | 75.845 | 414 | 52 | 3 | 3 | 416 | 2 | 367 | 0.0 | 616 |
| Msa1254230 | AT2G17130.1 | 73.913 | 414 | 60 | 3 | 3 | 416 | 2 | 367 | 0.0 | 600 |
| Msa1254230 | AT4G35650.1 | 72.397 | 413 | 67 | 3 | 4 | 416 | 3 | 368 | 0.0 | 597 |
| Msa1254230 | AT2G17130.2 | 72.947 | 414 | 60 | 3 | 3 | 416 | 2 | 363 | 0.0 | 592 |
| Msa1254230 | AT5G03290.1 | 44.619 | 381 | 158 | 4 | 40 | 415 | 42 | 374 | 1.97e-105 | 317 |
| Msa1254230 | AT3G09810.1 | 43.307 | 381 | 163 | 4 | 40 | 415 | 42 | 374 | 9.76e-100 | 302 |
| Msa1254230 | AT1G32480.1 | 56.627 | 249 | 69 | 5 | 41 | 287 | 2 | 213 | 2.84e-88 | 267 |
| Msa1254230 | AT1G80560.1 | 27.273 | 407 | 209 | 17 | 44 | 416 | 45 | 398 | 9.31e-26 | 108 |
| Msa1254230 | AT5G14200.1 | 27.083 | 384 | 199 | 16 | 44 | 398 | 49 | 380 | 2.01e-24 | 104 |
| Msa1254230 | AT5G14200.3 | 27.083 | 384 | 199 | 16 | 44 | 398 | 49 | 380 | 2.12e-24 | 104 |
| Msa1254230 | AT1G31180.1 | 26.425 | 386 | 199 | 15 | 44 | 398 | 46 | 377 | 4.13e-23 | 100 |
| Msa1254230 | AT1G31180.2 | 26.562 | 384 | 201 | 14 | 44 | 398 | 61 | 392 | 6.46e-23 | 100 |
Find 150 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAATAAGGTTTGTCTTAA+AGG | 0.160532 | 8_2:-52259247 | Msa1254230:CDS |
| CGATCCCGTCGCCGGGGATT+AGG | 0.182007 | 8_2:+52259395 | None:intergenic |
| ACGTTGATATTGTAGTTATT+AGG | 0.239338 | 8_2:-52259099 | Msa1254230:CDS |
| CTAGATTTCCATACAGATTT+GGG | 0.243372 | 8_2:+52256306 | None:intergenic |
| AAAGGTTTGTGATTGCAATA+TGG | 0.246112 | 8_2:-52258540 | Msa1254230:intron |
| ACTAGATTTCCATACAGATT+TGG | 0.273061 | 8_2:+52256305 | None:intergenic |
| CGTTGATATTGTAGTTATTA+GGG | 0.273382 | 8_2:-52259098 | Msa1254230:CDS |
| CTCACTGGCCACTACAATTC+CGG | 0.276591 | 8_2:-52259722 | Msa1254230:five_prime_UTR |
| TGAATCGATCCGTAAGAATA+AGG | 0.290840 | 8_2:-52259260 | Msa1254230:CDS |
| TCACTTGCTTTCTGTTGTTC+AGG | 0.298640 | 8_2:+52257709 | None:intergenic |
| GTGTTGCATAAACATTATTC+AGG | 0.302311 | 8_2:+52254516 | None:intergenic |
| TGTGCACCCATCAATCAAAT+TGG | 0.309585 | 8_2:-52254556 | Msa1254230:three_prime_UTR |
| ATTTCGTTGTATTTAATTCC+AGG | 0.346017 | 8_2:+52257606 | None:intergenic |
| GGGATTAGGGTTACGGGACG+GGG | 0.348439 | 8_2:+52259409 | None:intergenic |
| TTACTGCATCGACAACTTCT+TGG | 0.351267 | 8_2:+52254670 | None:intergenic |
| CTTGAACATGAGGTTGTTCC+CGG | 0.354977 | 8_2:-52259049 | Msa1254230:CDS |
| ATTGGTGATGGATGAAGGTT+GGG | 0.357386 | 8_2:+52259550 | None:intergenic |
| AATACTGCGGCAGGCATTGC+TGG | 0.359026 | 8_2:-52256278 | Msa1254230:CDS |
| GATCCCGTCGCCGGGGATTA+GGG | 0.361349 | 8_2:+52259396 | None:intergenic |
| CCCTTAAATGGAGGTATTAG+TGG | 0.363667 | 8_2:-52255103 | Msa1254230:intron |
| GCTTCATTATATTTGCTTTG+TGG | 0.364344 | 8_2:+52257679 | None:intergenic |
| AGGTGGATTGGTTACTCCTA+TGG | 0.365893 | 8_2:-52259227 | Msa1254230:CDS |
| GGGGATTAGGGTTACGGGAC+GGG | 0.371488 | 8_2:+52259408 | None:intergenic |
| TCGAATTTCTCGAAGTAAAC+TGG | 0.372851 | 8_2:+52259322 | None:intergenic |
| AAGGTTTGTGATTGCAATAT+GGG | 0.384383 | 8_2:-52258539 | Msa1254230:CDS |
| GGTCAGCAAATGCAGGAAAC+TGG | 0.384422 | 8_2:+52254769 | None:intergenic |
| CTTCTTGTTGCCATTGGTGA+TGG | 0.388414 | 8_2:+52259538 | None:intergenic |
| TCCTGCATTTGCTGACCGTT+TGG | 0.391960 | 8_2:-52254763 | Msa1254230:CDS |
| CTTTGAGATGGTGAATGGTT+CGG | 0.393371 | 8_2:+52259471 | None:intergenic |
| GCTTGCGGATGGTTTGTTCT+TGG | 0.398902 | 8_2:-52257658 | Msa1254230:CDS |
| GCTATTTCCAATTTGATTGA+TGG | 0.405150 | 8_2:+52254549 | None:intergenic |
| GAATGGTTCGGATTGGGATC+GGG | 0.408930 | 8_2:+52259483 | None:intergenic |
| TACTGCATCGACAACTTCTT+GGG | 0.411456 | 8_2:+52254671 | None:intergenic |
| GGGTTGAGAGGAGGTGTTTG+AGG | 0.411998 | 8_2:+52259503 | None:intergenic |
| TGAGAGGAGGTGTTTGAGGA+GGG | 0.412665 | 8_2:+52259507 | None:intergenic |
| AATTGAGAGAATAGTGAAAT+GGG | 0.415803 | 8_2:+52259663 | None:intergenic |
| GCAGGCATTGCTGGAGGCAC+TGG | 0.419145 | 8_2:-52256269 | Msa1254230:CDS |
| TAATTGAGAGAATAGTGAAA+TGG | 0.419545 | 8_2:+52259662 | None:intergenic |
| ACGGAAACATGGGGAGTGAT+TGG | 0.421408 | 8_2:+52259693 | None:intergenic |
| GGTTGAAGCTACCATGGAAT+TGG | 0.425871 | 8_2:+52259629 | None:intergenic |
| GTCGCCGGGGATTAGGGTTA+CGG | 0.426544 | 8_2:+52259402 | None:intergenic |
| TAAGACAAACCTTATTCTTA+CGG | 0.426710 | 8_2:+52259251 | None:intergenic |
| GTATTTAATTCCAGGATACT+TGG | 0.429599 | 8_2:+52257614 | None:intergenic |
| TGAATGGTTCGGATTGGGAT+CGG | 0.435193 | 8_2:+52259482 | None:intergenic |
| TCACTGGCCACTACAATTCC+GGG | 0.437634 | 8_2:-52259721 | Msa1254230:five_prime_UTR |
| CGGTGTCGTCGAAAGTCTTA+AGG | 0.445057 | 8_2:-52259029 | Msa1254230:intron |
| TGACTATAAAAGATTGTTCG+AGG | 0.447856 | 8_2:+52254595 | None:intergenic |
| GAGGTGTTTGAGGAGGGGTA+TGG | 0.448718 | 8_2:+52259513 | None:intergenic |
| CATTGGTGATGGATGAAGGT+TGG | 0.449398 | 8_2:+52259549 | None:intergenic |
| GGATTAGGGTTACGGGACGG+GGG | 0.451332 | 8_2:+52259410 | None:intergenic |
| TTGAGAGGAGGTGTTTGAGG+AGG | 0.452501 | 8_2:+52259506 | None:intergenic |
| ATGGATCTTCTTGTTGCCAT+TGG | 0.453390 | 8_2:+52259532 | None:intergenic |
| CGGCGCCGTTGAGCAACTAA+TGG | 0.458955 | 8_2:-52259359 | Msa1254230:CDS |
| TTTGAGCAGGGTGCTTCAGC+AGG | 0.462492 | 8_2:-52254879 | Msa1254230:CDS |
| AGTGGTCCGATCCCGTCGCC+GGG | 0.472280 | 8_2:+52259388 | None:intergenic |
| TCGCCGGGGATTAGGGTTAC+GGG | 0.472697 | 8_2:+52259403 | None:intergenic |
| GGGATCGGACCACTCGTAAC+CGG | 0.473370 | 8_2:-52259379 | Msa1254230:CDS |
| GATGGTGAATGGTTCGGATT+GGG | 0.474079 | 8_2:+52259477 | None:intergenic |
| GAGTGGTCCGATCCCGTCGC+CGG | 0.474941 | 8_2:+52259387 | None:intergenic |
| TTGCCATTGGTGATGGATGA+AGG | 0.475716 | 8_2:+52259545 | None:intergenic |
| TGAGCATGCTGTGTTTGAGC+AGG | 0.476481 | 8_2:-52254892 | Msa1254230:CDS |
| TTAAGACTTTCGACGACACC+GGG | 0.476912 | 8_2:+52259031 | None:intergenic |
| TCTCATCAGCTATGATGCTT+AGG | 0.477441 | 8_2:-52254797 | Msa1254230:CDS |
| GAGGTTGCCACCAAGTATCC+TGG | 0.478525 | 8_2:-52257624 | Msa1254230:CDS |
| CATCGCTTTGAGATGGTGAA+TGG | 0.478723 | 8_2:+52259466 | None:intergenic |
| CTAGTTGCAAATACTGCGGC+AGG | 0.479098 | 8_2:-52256287 | Msa1254230:CDS |
| GATGAGAGAAGAAGCGCCAC+TGG | 0.479561 | 8_2:+52254813 | None:intergenic |
| AGATGGTGAATGGTTCGGAT+TGG | 0.479659 | 8_2:+52259476 | None:intergenic |
| TTCGAGAAATTCGACGTACA+TGG | 0.480962 | 8_2:-52259313 | Msa1254230:CDS |
| TTGGTGATGGATGAAGGTTG+GGG | 0.482850 | 8_2:+52259551 | None:intergenic |
| GGAGGCACTGGAGTCATGCC+AGG | 0.483629 | 8_2:-52256257 | Msa1254230:CDS |
| AATAAGGTTTGTCTTAAAGG+TGG | 0.484570 | 8_2:-52259244 | Msa1254230:CDS |
| GGTTTGTCTTAAAGGTGGAT+TGG | 0.488656 | 8_2:-52259239 | Msa1254230:CDS |
| CTATTTCCAATTTGATTGAT+GGG | 0.488920 | 8_2:+52254550 | None:intergenic |
| TAACCCTAATCCCCGGCGAC+GGG | 0.492476 | 8_2:-52259399 | Msa1254230:CDS |
| CTTAAGACTTTCGACGACAC+CGG | 0.493025 | 8_2:+52259030 | None:intergenic |
| TCCAAACGGTCAGCAAATGC+AGG | 0.494673 | 8_2:+52254762 | None:intergenic |
| CATTAGTTGCTCAACGGCGC+CGG | 0.494753 | 8_2:+52259360 | None:intergenic |
| GATTAGGGTTACGGGACGGG+GGG | 0.495755 | 8_2:+52259411 | None:intergenic |
| TATGAATATGATGGTGGTGG+TGG | 0.510998 | 8_2:-52255070 | Msa1254230:CDS |
| GCCCGAGCAGTTTGATGTCA+TGG | 0.512416 | 8_2:-52257547 | Msa1254230:intron |
| TACCATGACATCAAACTGCT+CGG | 0.517965 | 8_2:+52257545 | None:intergenic |
| AAATATTCTAAAATTCTCAC+TGG | 0.523243 | 8_2:-52259737 | Msa1254230:five_prime_UTR |
| TAAATACAACGAAATTATTG+TGG | 0.523864 | 8_2:-52257598 | Msa1254230:CDS |
| ATTTGGTTACTGTGTTGTGA+TGG | 0.525489 | 8_2:+52259608 | None:intergenic |
| TGGGAAAGTCGACGGAAACA+TGG | 0.527750 | 8_2:+52259682 | None:intergenic |
| TTGGTTACTCCTATGGGTGG+TGG | 0.528515 | 8_2:-52259220 | Msa1254230:CDS |
| GGTGGATTGGTTACTCCTAT+GGG | 0.530483 | 8_2:-52259226 | Msa1254230:CDS |
| GAGAGGAGGTGTTTGAGGAG+GGG | 0.532450 | 8_2:+52259508 | None:intergenic |
| TAGGTTACCCCAAATCTGTA+TGG | 0.533364 | 8_2:-52256314 | Msa1254230:CDS |
| CGCTTCCATTAGTTGCTCAA+CGG | 0.535249 | 8_2:+52259354 | None:intergenic |
| ATTCTTCCATTCCAATTCCA+TGG | 0.536215 | 8_2:-52259640 | Msa1254230:five_prime_UTR |
| CTAATCCCCGGCGACGGGAT+CGG | 0.538156 | 8_2:-52259394 | Msa1254230:CDS |
| TACATGCACCGTCCCGGCGA+CGG | 0.545739 | 8_2:-52259436 | Msa1254230:CDS |
| CATCAAAAGTCGTGATGTTG+TGG | 0.548771 | 8_2:+52258516 | None:intergenic |
| AAGCTACCATGGAATTGGAA+TGG | 0.550296 | 8_2:+52259634 | None:intergenic |
| AATACTGAAGGGGAGTATGC+TGG | 0.554823 | 8_2:-52259073 | Msa1254230:CDS |
| CGGGGATTAGGGTTACGGGA+CGG | 0.556243 | 8_2:+52259407 | None:intergenic |
| GGTGCTTCAGCAGGAAATGT+TGG | 0.556712 | 8_2:-52254870 | Msa1254230:CDS |
| AGCAAATATAATGAAGCTTG+CGG | 0.556973 | 8_2:-52257673 | Msa1254230:CDS |
| AAGTATCGGACAAAGGATCT+TGG | 0.558261 | 8_2:-52254708 | Msa1254230:CDS |
| TTTAATTCCAGGATACTTGG+TGG | 0.560631 | 8_2:+52257617 | None:intergenic |
| GTTATTAGGGAGAATACTGA+AGG | 0.561297 | 8_2:-52259085 | Msa1254230:CDS |
| GGGAAAGTCGACGGAAACAT+GGG | 0.561366 | 8_2:+52259683 | None:intergenic |
| TGGTGATGGATGAAGGTTGG+GGG | 0.563710 | 8_2:+52259552 | None:intergenic |
| ACCATGACATCAAACTGCTC+GGG | 0.568329 | 8_2:+52257546 | None:intergenic |
| GTAACCCTAATCCCCGGCGA+CGG | 0.570101 | 8_2:-52259400 | Msa1254230:CDS |
| GAGCATGCTGTGTTTGAGCA+GGG | 0.577817 | 8_2:-52254891 | Msa1254230:CDS |
| TTATTAGGGAGAATACTGAA+GGG | 0.584736 | 8_2:-52259084 | Msa1254230:CDS |
| ATTGGGATCGGGTTGAGAGG+AGG | 0.584800 | 8_2:+52259494 | None:intergenic |
| GTAACCTACATGCACCGTCC+CGG | 0.585438 | 8_2:-52259442 | Msa1254230:CDS |
| GTTCTTGGAATCTTGTCGAG+AGG | 0.585888 | 8_2:-52257643 | Msa1254230:CDS |
| TGCATCGACAACTTCTTGGG+TGG | 0.586969 | 8_2:+52254674 | None:intergenic |
| AATATAATGAAGCTTGCGGA+TGG | 0.592033 | 8_2:-52257669 | Msa1254230:CDS |
| GGTTACGCATCGCTTTGAGA+TGG | 0.594581 | 8_2:+52259459 | None:intergenic |
| AAATATGAATATGATGGTGG+TGG | 0.595478 | 8_2:-52255073 | Msa1254230:CDS |
| CGGATTGGGATCGGGTTGAG+AGG | 0.596796 | 8_2:+52259491 | None:intergenic |
| TATCGGACAAAGGATCTTGG+AGG | 0.597549 | 8_2:-52254705 | Msa1254230:CDS |
| TCATTCTAGAGGGCAAGTAT+CGG | 0.606553 | 8_2:-52254722 | Msa1254230:CDS |
| TAGTGAAATGGGAAAGTCGA+CGG | 0.607391 | 8_2:+52259674 | None:intergenic |
| CAACCTTCATCCATCACCAA+TGG | 0.610911 | 8_2:-52259548 | Msa1254230:exon |
| GGTGGTGGTGAAAGTACTGA+TGG | 0.611118 | 8_2:-52255055 | Msa1254230:intron |
| ATGAGAGAAGAAGCGCCACT+GGG | 0.614739 | 8_2:+52254814 | None:intergenic |
| GTTCGCTTAATGTTCAGTTG+AGG | 0.618363 | 8_2:-52259192 | Msa1254230:CDS |
| GGAATGACCCGGAATTGTAG+TGG | 0.620225 | 8_2:+52259714 | None:intergenic |
| GGGGAGTGATTGGAATGACC+CGG | 0.621293 | 8_2:+52259703 | None:intergenic |
| TATTAGGGAGAATACTGAAG+GGG | 0.622910 | 8_2:-52259083 | Msa1254230:CDS |
| AAGCGAAGCAATCATGAATG+AGG | 0.626551 | 8_2:-52258480 | Msa1254230:intron |
| TCAACGGCGCCGGTTACGAG+TGG | 0.629526 | 8_2:+52259370 | None:intergenic |
| TCAACGTTATCATGTCGAGT+AGG | 0.631397 | 8_2:+52259115 | None:intergenic |
| TAGATTTCCATACAGATTTG+GGG | 0.633748 | 8_2:+52256307 | None:intergenic |
| TCATGTCGAGTAGGTAACCC+AGG | 0.633861 | 8_2:+52259124 | None:intergenic |
| GAACTAACACCACCACCCAT+AGG | 0.634743 | 8_2:+52259211 | None:intergenic |
| GTATGCTGGTCTTGAACATG+AGG | 0.635401 | 8_2:-52259059 | Msa1254230:CDS |
| GTCGCCGGGACGGTGCATGT+AGG | 0.635610 | 8_2:+52259438 | None:intergenic |
| CGTCCCGTAACCCTAATCCC+CGG | 0.639953 | 8_2:-52259406 | Msa1254230:CDS |
| GTGAAATATGAATATGATGG+TGG | 0.643749 | 8_2:-52255076 | Msa1254230:CDS |
| ATCGGACAAAGGATCTTGGA+GGG | 0.644506 | 8_2:-52254704 | Msa1254230:CDS |
| GGATTGGTTACTCCTATGGG+TGG | 0.645378 | 8_2:-52259223 | Msa1254230:CDS |
| TGACATGAAAGCTGTACCTA+CGG | 0.647259 | 8_2:-52259290 | Msa1254230:CDS |
| ACTGCGGCAGGCATTGCTGG+AGG | 0.647366 | 8_2:-52256275 | Msa1254230:CDS |
| TGTGATGGTTGAAGCTACCA+TGG | 0.651634 | 8_2:+52259623 | None:intergenic |
| AGAGGGCAAGTATCGGACAA+AGG | 0.667139 | 8_2:-52254715 | Msa1254230:CDS |
| TATGTGAAATATGAATATGA+TGG | 0.673258 | 8_2:-52255079 | Msa1254230:CDS |
| GTGGTCCGATCCCGTCGCCG+GGG | 0.685533 | 8_2:+52259389 | None:intergenic |
| GGCACTGGAGTCATGCCAGG+AGG | 0.693153 | 8_2:-52256254 | Msa1254230:intron |
| GGAAAGTCGACGGAAACATG+GGG | 0.693776 | 8_2:+52259684 | None:intergenic |
| ATCGATTCAAGAACTTCCGT+AGG | 0.726256 | 8_2:+52259274 | None:intergenic |
| AAATCTAGTTGCAAATACTG+CGG | 0.735896 | 8_2:-52256291 | Msa1254230:CDS |
| ACAAAAGACAGCTAACCCAG+TGG | 0.781740 | 8_2:-52254829 | Msa1254230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACAAAAATGACTATAAT+TGG | + | chr8_2:52255454-52255473 | None:intergenic | 15.0% |
| !!! | GTCATTTTTGTAATAATTTT+AGG | - | chr8_2:52255460-52255479 | Msa1254230:intron | 15.0% |
| !!! | TAGTTTATTTCTTAATTTTG+TGG | - | chr8_2:52255550-52255569 | Msa1254230:intron | 15.0% |
| !!! | TTGAATTTTTTGAATTGTTT+GGG | + | chr8_2:52258282-52258301 | None:intergenic | 15.0% |
| !! | TAAAGACATTAATATGAAAT+AGG | + | chr8_2:52258401-52258420 | None:intergenic | 15.0% |
| !!! | TGTTTGTATAATTTTTTTTG+AGG | - | chr8_2:52258610-52258629 | Msa1254230:intron | 15.0% |
| !! | CTGTAAAATAAAATTTAAAC+AGG | + | chr8_2:52258676-52258695 | None:intergenic | 15.0% |
| !!! | AAATATTCTAAAATTCTCAC+TGG | - | chr8_2:52254384-52254403 | Msa1254230:three_prime_UTR | 20.0% |
| !!! | TTAATTGTTTTAATCTTCCT+GGG | - | chr8_2:52254980-52254999 | Msa1254230:intron | 20.0% |
| !!! | TAATAATTTTAGGTTTGAGT+AGG | - | chr8_2:52255470-52255489 | Msa1254230:intron | 20.0% |
| !!! | GTAGGATTTTGAATATTTTA+AGG | - | chr8_2:52255488-52255507 | Msa1254230:intron | 20.0% |
| !! | TTGAAATTTCATAAATGTGT+AGG | - | chr8_2:52255524-52255543 | Msa1254230:intron | 20.0% |
| !! | TGAAATTTCATAAATGTGTA+GGG | - | chr8_2:52255525-52255544 | Msa1254230:intron | 20.0% |
| !!! | AATTTTGTGGTTTCTTAAAA+AGG | - | chr8_2:52255563-52255582 | Msa1254230:intron | 20.0% |
| !!! | CAAAAAAAAAGTACTGAATT+TGG | + | chr8_2:52256129-52256148 | None:intergenic | 20.0% |
| !! | TATATAAGTATGTCCTAAAA+TGG | + | chr8_2:52256186-52256205 | None:intergenic | 20.0% |
| !! | AACATTCTCACAAATTATAT+AGG | - | chr8_2:52256239-52256258 | Msa1254230:intron | 20.0% |
| !! | TAAATACAACGAAATTATTG+TGG | - | chr8_2:52256523-52256542 | Msa1254230:intron | 20.0% |
| !! | CATCATAGATTAAAGAAAAA+TGG | + | chr8_2:52256614-52256633 | None:intergenic | 20.0% |
| !!! | CATTTTTCTTTAATCTATGA+TGG | - | chr8_2:52256612-52256631 | Msa1254230:intron | 20.0% |
| !!! | CTCAATTTTATAAATGTTTC+TGG | + | chr8_2:52257054-52257073 | None:intergenic | 20.0% |
| !! | AGTGAATTTATAAAGTTAAG+TGG | + | chr8_2:52257481-52257500 | None:intergenic | 20.0% |
| !! | AGGTTAATGTTTAAAAACTT+TGG | + | chr8_2:52257530-52257549 | None:intergenic | 20.0% |
| !!! | CTTGAATTTTTTGAATTGTT+TGG | + | chr8_2:52258283-52258302 | None:intergenic | 20.0% |
| !! | CAAACAATTCAAAAAATTCA+AGG | - | chr8_2:52258281-52258300 | Msa1254230:intron | 20.0% |
| !! | TAGACTAATTAAATATAGGT+TGG | + | chr8_2:52258434-52258453 | None:intergenic | 20.0% |
| !! | CTGTTAGACTAATTAAATAT+AGG | + | chr8_2:52258438-52258457 | None:intergenic | 20.0% |
| !! | TATGTGAAATATGAATATGA+TGG | - | chr8_2:52259042-52259061 | Msa1254230:CDS | 20.0% |
| ! | AATTGAGAGAATAGTGAAAT+GGG | + | chr8_2:52254461-52254480 | None:intergenic | 25.0% |
| ! | TAATTGAGAGAATAGTGAAA+TGG | + | chr8_2:52254462-52254481 | None:intergenic | 25.0% |
| ! | TAAGACAAACCTTATTCTTA+CGG | + | chr8_2:52254873-52254892 | None:intergenic | 25.0% |
| ! | AAGAATAAGGTTTGTCTTAA+AGG | - | chr8_2:52254874-52254893 | Msa1254230:CDS | 25.0% |
| !!! | GTTAATTGTTTTAATCTTCC+TGG | - | chr8_2:52254979-52254998 | Msa1254230:intron | 25.0% |
| ! | ACGTTGATATTGTAGTTATT+AGG | - | chr8_2:52255022-52255041 | Msa1254230:intron | 25.0% |
| ! | CGTTGATATTGTAGTTATTA+GGG | - | chr8_2:52255023-52255042 | Msa1254230:intron | 25.0% |
| !!! | TCTTTGTTTTATATTGATCG+AGG | - | chr8_2:52255131-52255150 | Msa1254230:intron | 25.0% |
| ! | ACTCTTTATAAACTCATTTC+AGG | + | chr8_2:52255324-52255343 | None:intergenic | 25.0% |
| ! | AACATTATGGATTCTCTATT+AGG | + | chr8_2:52255402-52255421 | None:intergenic | 25.0% |
| ! | CAATCAATAACCTAGTTTAT+TGG | + | chr8_2:52255732-52255751 | None:intergenic | 25.0% |
| ! | GAAAATAGATGTATTACAGA+AGG | - | chr8_2:52255751-52255770 | Msa1254230:intron | 25.0% |
| ! | GAACTTAAATTAACCTTGAA+TGG | - | chr8_2:52255858-52255877 | Msa1254230:intron | 25.0% |
| !! | ACAACTTCAATTTAAAACCT+TGG | - | chr8_2:52256024-52256043 | Msa1254230:intron | 25.0% |
| !! | TTTTAATCCAAATATTACCC+TGG | + | chr8_2:52256093-52256112 | None:intergenic | 25.0% |
| !! | TTATATAGGTTCTTTTCCTT+TGG | - | chr8_2:52256253-52256272 | Msa1254230:intron | 25.0% |
| ! | AATCTAGATAGATATTCCAA+AGG | + | chr8_2:52256272-52256291 | None:intergenic | 25.0% |
| !!! | TTTGACTTGATATTTTTGGT+AGG | - | chr8_2:52256334-52256353 | Msa1254230:intron | 25.0% |
| ! | ATTTCGTTGTATTTAATTCC+AGG | + | chr8_2:52256518-52256537 | None:intergenic | 25.0% |
| !! | ATTAAACCATCTCTTTTGTT+TGG | - | chr8_2:52256651-52256670 | Msa1254230:intron | 25.0% |
| ! | ACAAACAGTTCATGAAAAAA+CGG | + | chr8_2:52256755-52256774 | None:intergenic | 25.0% |
| ! | TGAAAAACCAATAGCAAAAA+AGG | + | chr8_2:52256908-52256927 | None:intergenic | 25.0% |
| ! | TCTAATAGTTCTTAATTTCC+AGG | + | chr8_2:52256999-52257018 | None:intergenic | 25.0% |
| !! | GAATAATGTTCTAAACTTGA+TGG | - | chr8_2:52257993-52258012 | Msa1254230:intron | 25.0% |
| ! | TCATTAACTACATTAACATC+TGG | - | chr8_2:52258142-52258161 | Msa1254230:intron | 25.0% |
| !! | TTTATACCAGGTTTTCAAAA+AGG | + | chr8_2:52258358-52258377 | None:intergenic | 25.0% |
| ! | TAGACTAAACAATTTATACC+AGG | + | chr8_2:52258370-52258389 | None:intergenic | 25.0% |
| ! | TAGACAGAAGTAGAAATAAA+TGG | - | chr8_2:52258550-52258569 | Msa1254230:intron | 25.0% |
| ! | AGACAGAAGTAGAAATAAAT+GGG | - | chr8_2:52258551-52258570 | Msa1254230:intron | 25.0% |
| !!! | ATTTTTTTTGAGGTCTTTCA+TGG | - | chr8_2:52258620-52258639 | Msa1254230:intron | 25.0% |
| ! | AATATGCCAAAAATTTGTGA+AGG | - | chr8_2:52258707-52258726 | Msa1254230:intron | 25.0% |
| ! | AATAAAATGTCTGATTGTCT+TGG | - | chr8_2:52258944-52258963 | Msa1254230:intron | 25.0% |
| ! | ATAAAATGTCTGATTGTCTT+GGG | - | chr8_2:52258945-52258964 | Msa1254230:intron | 25.0% |
| ! | ATTTAAGGGTAGAAATATGT+CGG | + | chr8_2:52259007-52259026 | None:intergenic | 25.0% |
| ! | CTATTTCCAATTTGATTGAT+GGG | + | chr8_2:52259574-52259593 | None:intergenic | 25.0% |
| AATAAGGTTTGTCTTAAAGG+TGG | - | chr8_2:52254877-52254896 | Msa1254230:CDS | 30.0% | |
| TTATTAGGGAGAATACTGAA+GGG | - | chr8_2:52255037-52255056 | Msa1254230:intron | 30.0% | |
| ! | ATTTGAAGTTGTTTGTAGTG+TGG | - | chr8_2:52255245-52255264 | Msa1254230:intron | 30.0% |
| CTAACTCATCCTTACAAAAT+CGG | + | chr8_2:52255365-52255384 | None:intergenic | 30.0% | |
| TACGTGTCTAAAGAACATTA+TGG | + | chr8_2:52255415-52255434 | None:intergenic | 30.0% | |
| AAAGGTTTGTGATTGCAATA+TGG | - | chr8_2:52255581-52255600 | Msa1254230:intron | 30.0% | |
| AAGGTTTGTGATTGCAATAT+GGG | - | chr8_2:52255582-52255601 | Msa1254230:intron | 30.0% | |
| AATCTTGTAGCCAATAAACT+AGG | - | chr8_2:52255719-52255738 | Msa1254230:intron | 30.0% | |
| ! | AATTTAAGTTCGAACCTAAG+AGG | + | chr8_2:52255849-52255868 | None:intergenic | 30.0% |
| AATGGTTACAATTGCATATG+TGG | + | chr8_2:52255938-52255957 | None:intergenic | 30.0% | |
| CAATGTTGAATACTTAACCA+AGG | + | chr8_2:52256044-52256063 | None:intergenic | 30.0% | |
| CTTGGTTAAGTATTCAACAT+TGG | - | chr8_2:52256042-52256061 | Msa1254230:intron | 30.0% | |
| ! | CATTGGAAACTAAGTTGAAA+TGG | - | chr8_2:52256059-52256078 | Msa1254230:intron | 30.0% |
| GCTTCATTATATTTGCTTTG+TGG | + | chr8_2:52256445-52256464 | None:intergenic | 30.0% | |
| AGCAAATATAATGAAGCTTG+CGG | - | chr8_2:52256448-52256467 | Msa1254230:intron | 30.0% | |
| GTATTTAATTCCAGGATACT+TGG | + | chr8_2:52256510-52256529 | None:intergenic | 30.0% | |
| TGAAAAAACGGAAATGCAAA+TGG | + | chr8_2:52256743-52256762 | None:intergenic | 30.0% | |
| !!! | GTTTTTTCATGAACTGTTTG+TGG | - | chr8_2:52256754-52256773 | Msa1254230:intron | 30.0% |
| !!! | CATGATTCCTTTTTTGCTAT+TGG | - | chr8_2:52256898-52256917 | Msa1254230:intron | 30.0% |
| TAACAATTATCAGATGCTGT+TGG | + | chr8_2:52257094-52257113 | None:intergenic | 30.0% | |
| GCATCTGATAATTGTTAACA+TGG | - | chr8_2:52257097-52257116 | Msa1254230:intron | 30.0% | |
| TAGAGAGTAGAAAAGATTCA+GGG | + | chr8_2:52257170-52257189 | None:intergenic | 30.0% | |
| ATAGAGAGTAGAAAAGATTC+AGG | + | chr8_2:52257171-52257190 | None:intergenic | 30.0% | |
| TAAACAAGGTTTGAATGTCT+AGG | - | chr8_2:52257271-52257290 | Msa1254230:intron | 30.0% | |
| ATCTACACATGAATGAACAA+GGG | + | chr8_2:52257315-52257334 | None:intergenic | 30.0% | |
| TATCTACACATGAATGAACA+AGG | + | chr8_2:52257316-52257335 | None:intergenic | 30.0% | |
| TTCAACCTTTAACGTATCTT+AGG | - | chr8_2:52257376-52257395 | Msa1254230:intron | 30.0% | |
| TACATCCTAAGATACGTTAA+AGG | + | chr8_2:52257384-52257403 | None:intergenic | 30.0% | |
| TTAGGATGTAGAAGTTTAGA+GGG | - | chr8_2:52257394-52257413 | Msa1254230:intron | 30.0% | |
| ! | CCTTTTCAAACAGAAAGAAA+GGG | + | chr8_2:52257436-52257455 | None:intergenic | 30.0% |
| ! | TCCTTTTCAAACAGAAAGAA+AGG | + | chr8_2:52257437-52257456 | None:intergenic | 30.0% |
| TTCTTTGGATGGATAAGTTA+GGG | + | chr8_2:52257567-52257586 | None:intergenic | 30.0% | |
| TGTACTTTGTGGAATATTGA+AGG | - | chr8_2:52257606-52257625 | Msa1254230:CDS | 30.0% | |
| GTACTTTGTGGAATATTGAA+GGG | - | chr8_2:52257607-52257626 | Msa1254230:CDS | 30.0% | |
| TAGATTTCCATACAGATTTG+GGG | + | chr8_2:52257817-52257836 | None:intergenic | 30.0% | |
| CTAGATTTCCATACAGATTT+GGG | + | chr8_2:52257818-52257837 | None:intergenic | 30.0% | |
| ACTAGATTTCCATACAGATT+TGG | + | chr8_2:52257819-52257838 | None:intergenic | 30.0% | |
| AAATCTAGTTGCAAATACTG+CGG | - | chr8_2:52257830-52257849 | Msa1254230:intron | 30.0% | |
| TAACTAAAAACTATACCTCC+TGG | + | chr8_2:52257885-52257904 | None:intergenic | 30.0% | |
| ATAATCAGATCAAAGCTCTA+AGG | + | chr8_2:52257922-52257941 | None:intergenic | 30.0% | |
| !! | TAGGCAAGAAGGTATTTAAA+AGG | + | chr8_2:52257949-52257968 | None:intergenic | 30.0% |
| ATTAGTGAAATGTGTGCAAA+TGG | - | chr8_2:52258255-52258274 | Msa1254230:intron | 30.0% | |
| TCTAACAGACTAATATGCAA+TGG | - | chr8_2:52258450-52258469 | Msa1254230:intron | 30.0% | |
| CTAACAGACTAATATGCAAT+GGG | - | chr8_2:52258451-52258470 | Msa1254230:intron | 30.0% | |
| !! | CAAACTGAGTTTTATAAGTC+AGG | - | chr8_2:52258575-52258594 | Msa1254230:intron | 30.0% |
| ! | CTACTACCTTCACAAATTTT+TGG | + | chr8_2:52258716-52258735 | None:intergenic | 30.0% |
| AATTTGTGAAGGTAGTAGTA+TGG | - | chr8_2:52258718-52258737 | Msa1254230:intron | 30.0% | |
| !!! | AGACCTAAATTTTGTTGTTG+TGG | - | chr8_2:52258862-52258881 | Msa1254230:intron | 30.0% |
| ATGCCACAACAACAAAATTT+AGG | + | chr8_2:52258868-52258887 | None:intergenic | 30.0% | |
| GGTAGTGTATTTAGGTAAAT+AGG | + | chr8_2:52258900-52258919 | None:intergenic | 30.0% | |
| TTATTATGTAGACAGAGTTG+AGG | + | chr8_2:52258929-52258948 | None:intergenic | 30.0% | |
| TTTAAGGGTAGAAATATGTC+GGG | + | chr8_2:52259006-52259025 | None:intergenic | 30.0% | |
| ! | GACATATTTCTACCCTTAAA+TGG | - | chr8_2:52259006-52259025 | Msa1254230:intron | 30.0% |
| ! | ATATTTCTACCCTTAAATGG+AGG | - | chr8_2:52259009-52259028 | Msa1254230:intron | 30.0% |
| GTGAAATATGAATATGATGG+TGG | - | chr8_2:52259045-52259064 | Msa1254230:CDS | 30.0% | |
| !! | AAATATGAATATGATGGTGG+TGG | - | chr8_2:52259048-52259067 | Msa1254230:CDS | 30.0% |
| ! | TTTCAACAGCATTTTCCAAA+CGG | + | chr8_2:52259376-52259395 | None:intergenic | 30.0% |
| TGTTGAAAAAGTCATTCTAG+AGG | - | chr8_2:52259388-52259407 | Msa1254230:CDS | 30.0% | |
| GTTGAAAAAGTCATTCTAGA+GGG | - | chr8_2:52259389-52259408 | Msa1254230:CDS | 30.0% | |
| TGACTATAAAAGATTGTTCG+AGG | + | chr8_2:52259529-52259548 | None:intergenic | 30.0% | |
| ! | GCTATTTCCAATTTGATTGA+TGG | + | chr8_2:52259575-52259594 | None:intergenic | 30.0% |
| GTGTTGCATAAACATTATTC+AGG | + | chr8_2:52259608-52259627 | None:intergenic | 30.0% | |
| ! | CTTATCACTCTGAATTTTTC+AGG | + | chr8_2:52259655-52259674 | None:intergenic | 30.0% |
| GAAAAATTCAGAGTGATAAG+TGG | - | chr8_2:52259655-52259674 | Msa1254230:five_prime_UTR | 30.0% | |
| ATTCTTCCATTCCAATTCCA+TGG | - | chr8_2:52254481-52254500 | Msa1254230:three_prime_UTR | 35.0% | |
| ATTTGGTTACTGTGTTGTGA+TGG | + | chr8_2:52254516-52254535 | None:intergenic | 35.0% | |
| !! | TGGGGGTTTTTGAGAAAAAA+GGG | + | chr8_2:52254555-52254574 | None:intergenic | 35.0% |
| !! | TTGGGGGTTTTTGAGAAAAA+AGG | + | chr8_2:52254556-52254575 | None:intergenic | 35.0% |
| TCGAATTTCTCGAAGTAAAC+TGG | + | chr8_2:52254802-52254821 | None:intergenic | 35.0% | |
| TGAATCGATCCGTAAGAATA+AGG | - | chr8_2:52254861-52254880 | Msa1254230:CDS | 35.0% | |
| GTTATTAGGGAGAATACTGA+AGG | - | chr8_2:52255036-52255055 | Msa1254230:intron | 35.0% | |
| TATTAGGGAGAATACTGAAG+GGG | - | chr8_2:52255038-52255057 | Msa1254230:intron | 35.0% | |
| ATTGATCGAGGAGAAAAACA+TGG | - | chr8_2:52255143-52255162 | Msa1254230:intron | 35.0% | |
| ! | CTCTACAATCCGATTTTGTA+AGG | - | chr8_2:52255353-52255372 | Msa1254230:intron | 35.0% |
| TTTAGACACGTATGTTTGCA+AGG | - | chr8_2:52255423-52255442 | Msa1254230:intron | 35.0% | |
| TTAGACACGTATGTTTGCAA+GGG | - | chr8_2:52255424-52255443 | Msa1254230:intron | 35.0% | |
| TTTCTCTTTCCAAACCTCTT+AGG | - | chr8_2:52255832-52255851 | Msa1254230:intron | 35.0% | |
| ! | ACTAAGTTGAAATGGTGTCA+AGG | - | chr8_2:52256067-52256086 | Msa1254230:intron | 35.0% |
| ! | TTGTTGTACTGATGCAGTAT+TGG | - | chr8_2:52256298-52256317 | Msa1254230:CDS | 35.0% |
| ! | TGTTGTACTGATGCAGTATT+GGG | - | chr8_2:52256299-52256318 | Msa1254230:CDS | 35.0% |
| !!! | GCGGTTTGACTTGATATTTT+TGG | - | chr8_2:52256330-52256349 | Msa1254230:intron | 35.0% |
| AATATAATGAAGCTTGCGGA+TGG | - | chr8_2:52256452-52256471 | Msa1254230:intron | 35.0% | |
| TTTAATTCCAGGATACTTGG+TGG | + | chr8_2:52256507-52256526 | None:intergenic | 35.0% | |
| ATCAACTTAGAAACGAGTCA+TGG | - | chr8_2:52256828-52256847 | Msa1254230:intron | 35.0% | |
| ATTTCCAGGATAATGTGCTT+AGG | + | chr8_2:52256985-52257004 | None:intergenic | 35.0% | |
| GATCTCAACTTACATGGTTT+GGG | + | chr8_2:52257225-52257244 | None:intergenic | 35.0% | |
| TGATCTCAACTTACATGGTT+TGG | + | chr8_2:52257226-52257245 | None:intergenic | 35.0% | |
| GACTTTGATCTCAACTTACA+TGG | + | chr8_2:52257231-52257250 | None:intergenic | 35.0% | |
| TGTTTATCCATGTCACAGAA+GGG | + | chr8_2:52257257-52257276 | None:intergenic | 35.0% | |
| TTGTTTATCCATGTCACAGA+AGG | + | chr8_2:52257258-52257277 | None:intergenic | 35.0% | |
| TTCTGTGACATGGATAAACA+AGG | - | chr8_2:52257257-52257276 | Msa1254230:intron | 35.0% | |
| CTTAGGATGTAGAAGTTTAG+AGG | - | chr8_2:52257393-52257412 | Msa1254230:intron | 35.0% | |
| ATGTAGAAGTTTAGAGGGAA+GGG | - | chr8_2:52257399-52257418 | Msa1254230:intron | 35.0% | |
| CCCTTTCTTTCTGTTTGAAA+AGG | - | chr8_2:52257433-52257452 | Msa1254230:intron | 35.0% | |
| TCTTTCTGTTTGAAAAGGAG+AGG | - | chr8_2:52257438-52257457 | Msa1254230:intron | 35.0% | |
| TCTTTGGATGGATAAGTTAG+GGG | + | chr8_2:52257566-52257585 | None:intergenic | 35.0% | |
| GTTCTTTGGATGGATAAGTT+AGG | + | chr8_2:52257568-52257587 | None:intergenic | 35.0% | |
| TAAGCAAGAATCATTGCTGT+GGG | - | chr8_2:52257663-52257682 | Msa1254230:CDS | 35.0% | |
| AGTTGCAAGACAAAATCATC+TGG | + | chr8_2:52257708-52257727 | None:intergenic | 35.0% | |
| TCAGATAACGTGGTAAAAGT+AGG | + | chr8_2:52257968-52257987 | None:intergenic | 35.0% | |
| TATTCACACATCAGATAACG+TGG | + | chr8_2:52257978-52257997 | None:intergenic | 35.0% | |
| !! | TGTTCTAAACTTGATGGACT+AGG | - | chr8_2:52257999-52258018 | Msa1254230:intron | 35.0% |
| ! | GCTTGTCTAGATGATTGTTT+TGG | - | chr8_2:52258036-52258055 | Msa1254230:intron | 35.0% |
| ! | TCTGTCATAGGCTTTCTTTT+AGG | - | chr8_2:52258322-52258341 | Msa1254230:intron | 35.0% |
| !! | TCATAGGCTTTCTTTTAGGT+TGG | - | chr8_2:52258326-52258345 | Msa1254230:intron | 35.0% |
| ! | CCAGGTTTTCAAAAAGGTTA+GGG | + | chr8_2:52258352-52258371 | None:intergenic | 35.0% |
| ! | ACCAGGTTTTCAAAAAGGTT+AGG | + | chr8_2:52258353-52258372 | None:intergenic | 35.0% |
| ! | AGACTAATATGCAATGGGTT+AGG | - | chr8_2:52258456-52258475 | Msa1254230:intron | 35.0% |
| !!! | GGCTTTTTGGTAGTGTATTT+AGG | + | chr8_2:52258908-52258927 | None:intergenic | 35.0% |
| CCACTAATACCTCCATTTAA+GGG | + | chr8_2:52259021-52259040 | None:intergenic | 35.0% | |
| GGTTTGTGTTTGTGATTATC+AGG | + | chr8_2:52259177-52259196 | None:intergenic | 35.0% | |
| ACCAACATTACCTGCAAAAA+AGG | + | chr8_2:52259207-52259226 | None:intergenic | 35.0% | |
| TAGTGAAATGGGAAAGTCGA+CGG | + | chr8_2:52254450-52254469 | None:intergenic | 40.0% | |
| AAGCTACCATGGAATTGGAA+TGG | + | chr8_2:52254490-52254509 | None:intergenic | 40.0% | |
| !! | GGTTTTTGAGAAAAAAGGGG+GGG | + | chr8_2:52254551-52254570 | None:intergenic | 40.0% |
| !! | GGGTTTTTGAGAAAAAAGGG+GGG | + | chr8_2:52254552-52254571 | None:intergenic | 40.0% |
| !! | GGGGTTTTTGAGAAAAAAGG+GGG | + | chr8_2:52254553-52254572 | None:intergenic | 40.0% |
| !! | GGGGGTTTTTGAGAAAAAAG+GGG | + | chr8_2:52254554-52254573 | None:intergenic | 40.0% |
| !! | ATTGGTGATGGATGAAGGTT+GGG | + | chr8_2:52254574-52254593 | None:intergenic | 40.0% |
| ATGGATCTTCTTGTTGCCAT+TGG | + | chr8_2:52254592-52254611 | None:intergenic | 40.0% | |
| !! | CTTTGAGATGGTGAATGGTT+CGG | + | chr8_2:52254653-52254672 | None:intergenic | 40.0% |
| TTCGAGAAATTCGACGTACA+TGG | - | chr8_2:52254808-52254827 | Msa1254230:CDS | 40.0% | |
| TGACATGAAAGCTGTACCTA+CGG | - | chr8_2:52254831-52254850 | Msa1254230:CDS | 40.0% | |
| ! | ATCGATTCAAGAACTTCCGT+AGG | + | chr8_2:52254850-52254869 | None:intergenic | 40.0% |
| GGTTTGTCTTAAAGGTGGAT+TGG | - | chr8_2:52254882-52254901 | Msa1254230:CDS | 40.0% | |
| GTTCGCTTAATGTTCAGTTG+AGG | - | chr8_2:52254929-52254948 | Msa1254230:intron | 40.0% | |
| TCAACGTTATCATGTCGAGT+AGG | + | chr8_2:52255009-52255028 | None:intergenic | 40.0% | |
| ! | TCAAGTCTTATCCCACTAAG+TGG | + | chr8_2:52255196-52255215 | None:intergenic | 40.0% |
| CATCAAAAGTCGTGATGTTG+TGG | + | chr8_2:52255608-52255627 | None:intergenic | 40.0% | |
| AAGCGAAGCAATCATGAATG+AGG | - | chr8_2:52255641-52255660 | Msa1254230:intron | 40.0% | |
| AAGTTCGAACCTAAGAGGTT+TGG | + | chr8_2:52255844-52255863 | None:intergenic | 40.0% | |
| GAAACGTACATGTAAGGAGA+AGG | + | chr8_2:52255899-52255918 | None:intergenic | 40.0% | |
| GAGGAAGAAACGTACATGTA+AGG | + | chr8_2:52255905-52255924 | None:intergenic | 40.0% | |
| !! | ACGTTTCTTCCTCTAAAACC+TGG | - | chr8_2:52255912-52255931 | Msa1254230:intron | 40.0% |
| TTACAATTGCATATGTGGCC+AGG | + | chr8_2:52255933-52255952 | None:intergenic | 40.0% | |
| !! | AAACGTGCTGATTAGCGAAA+TGG | + | chr8_2:52255956-52255975 | None:intergenic | 40.0% |
| ATTTCGCTAATCAGCACGTT+TGG | - | chr8_2:52255955-52255974 | Msa1254230:intron | 40.0% | |
| ! | GATGTGAGATACTGGGTTTT+GGG | + | chr8_2:52255992-52256011 | None:intergenic | 40.0% |
| ! | TGATGTGAGATACTGGGTTT+TGG | + | chr8_2:52255993-52256012 | None:intergenic | 40.0% |
| CGTCATTGATGTGAGATACT+GGG | + | chr8_2:52255999-52256018 | None:intergenic | 40.0% | |
| CCAGTATCTCACATCAATGA+CGG | - | chr8_2:52255997-52256016 | Msa1254230:intron | 40.0% | |
| TCACTTGCTTTCTGTTGTTC+AGG | + | chr8_2:52256415-52256434 | None:intergenic | 40.0% | |
| TACCATGACATCAAACTGCT+CGG | + | chr8_2:52256579-52256598 | None:intergenic | 40.0% | |
| !! | ACCATCTCTTTTGTTTGGCA+AGG | - | chr8_2:52256656-52256675 | Msa1254230:intron | 40.0% |
| ACCTTGCCAAACAAAAGAGA+TGG | + | chr8_2:52256660-52256679 | None:intergenic | 40.0% | |
| ATGGACTCATAATACGAGTG+AGG | + | chr8_2:52256724-52256743 | None:intergenic | 40.0% | |
| !!! | TGCTATTGGTTTTTCACTGC+TGG | - | chr8_2:52256912-52256931 | Msa1254230:intron | 40.0% |
| ATCTCCTAAGCACATTATCC+TGG | - | chr8_2:52256978-52256997 | Msa1254230:intron | 40.0% | |
| GGCTGAGAAGAACTGTTATT+TGG | + | chr8_2:52257124-52257143 | None:intergenic | 40.0% | |
| AAGATTCAGGGTAGGTCAAA+TGG | + | chr8_2:52257158-52257177 | None:intergenic | 40.0% | |
| GAGTAGAAAAGATTCAGGGT+AGG | + | chr8_2:52257166-52257185 | None:intergenic | 40.0% | |
| GATGTAGAAGTTTAGAGGGA+AGG | - | chr8_2:52257398-52257417 | Msa1254230:intron | 40.0% | |
| TGGATAAGTTAGGGGAGAAA+GGG | + | chr8_2:52257558-52257577 | None:intergenic | 40.0% | |
| ATGGATAAGTTAGGGGAGAA+AGG | + | chr8_2:52257559-52257578 | None:intergenic | 40.0% | |
| AAGTACATCTACATCCTCCA+GGG | + | chr8_2:52257593-52257612 | None:intergenic | 40.0% | |
| AAAGTACATCTACATCCTCC+AGG | + | chr8_2:52257594-52257613 | None:intergenic | 40.0% | |
| GAGGATGTAGATGTACTTTG+TGG | - | chr8_2:52257595-52257614 | Msa1254230:CDS | 40.0% | |
| CTAAGCAAGAATCATTGCTG+TGG | - | chr8_2:52257662-52257681 | Msa1254230:CDS | 40.0% | |
| GACAAAATCATCTGGACCTA+AGG | + | chr8_2:52257700-52257719 | None:intergenic | 40.0% | |
| ! | GATTTTGTCTTGCAACTCAC+TGG | - | chr8_2:52257711-52257730 | Msa1254230:CDS | 40.0% |
| ! | GCATACTTTTACCTTGTGCT+AGG | - | chr8_2:52257788-52257807 | Msa1254230:intron | 40.0% |
| TAGGTTACCCCAAATCTGTA+TGG | - | chr8_2:52257807-52257826 | Msa1254230:intron | 40.0% | |
| !! | CCCTAACCTTTTTGAAAACC+TGG | - | chr8_2:52258349-52258368 | Msa1254230:intron | 40.0% |
| ! | TAGACAGAGTTGAGGCTTTT+TGG | + | chr8_2:52258921-52258940 | None:intergenic | 40.0% |
| !! | CCCTTAAATGGAGGTATTAG+TGG | - | chr8_2:52259018-52259037 | Msa1254230:intron | 40.0% |
| GCCACTAATACCTCCATTTA+AGG | + | chr8_2:52259022-52259041 | None:intergenic | 40.0% | |
| !! | TATGAATATGATGGTGGTGG+TGG | - | chr8_2:52259051-52259070 | Msa1254230:CDS | 40.0% |
| !! | TGAAAGTACTGATGGTAGGT+TGG | - | chr8_2:52259074-52259093 | Msa1254230:CDS | 40.0% |
| !!! | ACCATTTGTGCCTTTTTTGC+AGG | - | chr8_2:52259194-52259213 | Msa1254230:CDS | 40.0% |
| ! | ACCTGCAAAAAAGGCACAAA+TGG | + | chr8_2:52259198-52259217 | None:intergenic | 40.0% |
| !!! | GCCTTTTTTGCAGGTAATGT+TGG | - | chr8_2:52259203-52259222 | Msa1254230:CDS | 40.0% |
| TCTCATCAGCTATGATGCTT+AGG | - | chr8_2:52259324-52259343 | Msa1254230:CDS | 40.0% | |
| ! | TCATTCTAGAGGGCAAGTAT+CGG | - | chr8_2:52259399-52259418 | Msa1254230:CDS | 40.0% |
| !! | AAGTATCGGACAAAGGATCT+TGG | - | chr8_2:52259413-52259432 | Msa1254230:CDS | 40.0% |
| ! | TACTGCATCGACAACTTCTT+GGG | + | chr8_2:52259453-52259472 | None:intergenic | 40.0% |
| ! | TTACTGCATCGACAACTTCT+TGG | + | chr8_2:52259454-52259473 | None:intergenic | 40.0% |
| TGTGCACCCATCAATCAAAT+TGG | - | chr8_2:52259565-52259584 | Msa1254230:five_prime_UTR | 40.0% | |
| GGTTGAAGCTACCATGGAAT+TGG | + | chr8_2:52254495-52254514 | None:intergenic | 45.0% | |
| TGTGATGGTTGAAGCTACCA+TGG | + | chr8_2:52254501-52254520 | None:intergenic | 45.0% | |
| !! | TTGGTGATGGATGAAGGTTG+GGG | + | chr8_2:52254573-52254592 | None:intergenic | 45.0% |
| !! | CATTGGTGATGGATGAAGGT+TGG | + | chr8_2:52254575-52254594 | None:intergenic | 45.0% |
| CAACCTTCATCCATCACCAA+TGG | - | chr8_2:52254573-52254592 | Msa1254230:three_prime_UTR | 45.0% | |
| !! | TTGCCATTGGTGATGGATGA+AGG | + | chr8_2:52254579-52254598 | None:intergenic | 45.0% |
| CTTCTTGTTGCCATTGGTGA+TGG | + | chr8_2:52254586-52254605 | None:intergenic | 45.0% | |
| ! | TGAATGGTTCGGATTGGGAT+CGG | + | chr8_2:52254642-52254661 | None:intergenic | 45.0% |
| ! | GATGGTGAATGGTTCGGATT+GGG | + | chr8_2:52254647-52254666 | None:intergenic | 45.0% |
| ! | AGATGGTGAATGGTTCGGAT+TGG | + | chr8_2:52254648-52254667 | None:intergenic | 45.0% |
| !! | CATCGCTTTGAGATGGTGAA+TGG | + | chr8_2:52254658-52254677 | None:intergenic | 45.0% |
| CGCTTCCATTAGTTGCTCAA+CGG | + | chr8_2:52254770-52254789 | None:intergenic | 45.0% | |
| !! | AGGTGGATTGGTTACTCCTA+TGG | - | chr8_2:52254894-52254913 | Msa1254230:CDS | 45.0% |
| !! | GGTGGATTGGTTACTCCTAT+GGG | - | chr8_2:52254895-52254914 | Msa1254230:CDS | 45.0% |
| ! | AATACTGAAGGGGAGTATGC+TGG | - | chr8_2:52255048-52255067 | Msa1254230:intron | 45.0% |
| !! | GTATGCTGGTCTTGAACATG+AGG | - | chr8_2:52255062-52255081 | Msa1254230:CDS | 45.0% |
| CTTGAACATGAGGTTGTTCC+CGG | - | chr8_2:52255072-52255091 | Msa1254230:CDS | 45.0% | |
| TTAAGACTTTCGACGACACC+GGG | + | chr8_2:52255093-52255112 | None:intergenic | 45.0% | |
| CTTAAGACTTTCGACGACAC+CGG | + | chr8_2:52255094-52255113 | None:intergenic | 45.0% | |
| CTTATCCCACTAAGTGGTGT+CGG | + | chr8_2:52255190-52255209 | None:intergenic | 45.0% | |
| GTACATGTAAGGAGAAGGCA+TGG | + | chr8_2:52255894-52255913 | None:intergenic | 45.0% | |
| !! | CATATGTGGCCAGGTTTTAG+AGG | + | chr8_2:52255924-52255943 | None:intergenic | 45.0% |
| GCTAATCAGCACGTTTGGTT+GGG | - | chr8_2:52255960-52255979 | Msa1254230:intron | 45.0% | |
| CCGTCATTGATGTGAGATAC+TGG | + | chr8_2:52256000-52256019 | None:intergenic | 45.0% | |
| ! | TTGAAATGGTGTCAAGGCCA+GGG | - | chr8_2:52256073-52256092 | Msa1254230:intron | 45.0% |
| GTCAAGGCCAGGGTAATATT+TGG | - | chr8_2:52256083-52256102 | Msa1254230:intron | 45.0% | |
| ! | GAGCTGTCGTCTACCATTTT+AGG | - | chr8_2:52256170-52256189 | Msa1254230:intron | 45.0% |
| ! | GCAGTATTGGGTTGTGTTTG+CGG | - | chr8_2:52256311-52256330 | Msa1254230:CDS | 45.0% |
| GTTCTTGGAATCTTGTCGAG+AGG | - | chr8_2:52256478-52256497 | Msa1254230:intron | 45.0% | |
| ACCATGACATCAAACTGCTC+GGG | + | chr8_2:52256578-52256597 | None:intergenic | 45.0% | |
| !! | TTCACTGCTGGTTCAGTCAA+AGG | - | chr8_2:52256924-52256943 | Msa1254230:intron | 45.0% |
| !! | TGCTGGTTCAGTCAAAGGTT+GGG | - | chr8_2:52256929-52256948 | Msa1254230:intron | 45.0% |
| TCAGTCAAAGGTTGGGAACA+TGG | - | chr8_2:52256936-52256955 | Msa1254230:intron | 45.0% | |
| CAGTCAAAGGTTGGGAACAT+GGG | - | chr8_2:52256937-52256956 | Msa1254230:intron | 45.0% | |
| AGGTTGGGAACATGGGAAAA+AGG | - | chr8_2:52256944-52256963 | Msa1254230:intron | 45.0% | |
| ATTCAGGGTAGGTCAAATGG+AGG | + | chr8_2:52257155-52257174 | None:intergenic | 45.0% | |
| GGCATGTGTAAAGGAGAATG+TGG | + | chr8_2:52257204-52257223 | None:intergenic | 45.0% | |
| ! | CATGGTTTGGGCATGTGTAA+AGG | + | chr8_2:52257213-52257232 | None:intergenic | 45.0% |
| AGTCAAACCCTTCTGTGACA+TGG | - | chr8_2:52257247-52257266 | Msa1254230:intron | 45.0% | |
| TAGAAGTTTAGAGGGAAGGG+AGG | - | chr8_2:52257402-52257421 | Msa1254230:intron | 45.0% | |
| AGAAGTTTAGAGGGAAGGGA+GGG | - | chr8_2:52257403-52257422 | Msa1254230:intron | 45.0% | |
| TTAGGGGAGAAAGGGATTGA+AGG | + | chr8_2:52257550-52257569 | None:intergenic | 45.0% | |
| ATCCATCCAAAGAACAACCC+TGG | - | chr8_2:52257573-52257592 | Msa1254230:CDS | 45.0% | |
| CAAGAATCATTGCTGTGGGT+TGG | - | chr8_2:52257667-52257686 | Msa1254230:CDS | 45.0% | |
| !! | GTGGGTTGGTTATCAACCTT+AGG | - | chr8_2:52257681-52257700 | Msa1254230:CDS | 45.0% |
| ! | ATTTGGGGTAACCTAGCACA+AGG | + | chr8_2:52257802-52257821 | None:intergenic | 45.0% |
| CGTGGTAAAAGTAGGCAAGA+AGG | + | chr8_2:52257960-52257979 | None:intergenic | 45.0% | |
| TCTGACCTGTTGTCTGTCAT+AGG | - | chr8_2:52258310-52258329 | Msa1254230:intron | 45.0% | |
| GAAAGCCTATGACAGACAAC+AGG | + | chr8_2:52258318-52258337 | None:intergenic | 45.0% | |
| TGTCTTGGGCAAACTAGACT+AGG | - | chr8_2:52258959-52258978 | Msa1254230:intron | 45.0% | |
| !! | GTGGTGAAAGTACTGATGGT+AGG | - | chr8_2:52259070-52259089 | Msa1254230:CDS | 45.0% |
| ! | TTGTTGGGTTTAGGGCTTCT+GGG | - | chr8_2:52259103-52259122 | Msa1254230:CDS | 45.0% |
| ACAAAAGACAGCTAACCCAG+TGG | - | chr8_2:52259292-52259311 | Msa1254230:CDS | 45.0% | |
| TATCGGACAAAGGATCTTGG+AGG | - | chr8_2:52259416-52259435 | Msa1254230:CDS | 45.0% | |
| ATCGGACAAAGGATCTTGGA+GGG | - | chr8_2:52259417-52259436 | Msa1254230:CDS | 45.0% | |
| !! | ATATAAATATTTGAAAAATA+AGG | - | chr8_2:52256203-52256222 | Msa1254230:intron | 5.0% |
| CTCACTGGCCACTACAATTC+CGG | - | chr8_2:52254399-52254418 | Msa1254230:three_prime_UTR | 50.0% | |
| TCACTGGCCACTACAATTCC+GGG | - | chr8_2:52254400-52254419 | Msa1254230:three_prime_UTR | 50.0% | |
| GGAATGACCCGGAATTGTAG+TGG | + | chr8_2:52254410-52254429 | None:intergenic | 50.0% | |
| ACGGAAACATGGGGAGTGAT+TGG | + | chr8_2:52254431-52254450 | None:intergenic | 50.0% | |
| GGAAAGTCGACGGAAACATG+GGG | + | chr8_2:52254440-52254459 | None:intergenic | 50.0% | |
| GGGAAAGTCGACGGAAACAT+GGG | + | chr8_2:52254441-52254460 | None:intergenic | 50.0% | |
| TGGGAAAGTCGACGGAAACA+TGG | + | chr8_2:52254442-52254461 | None:intergenic | 50.0% | |
| !! | TGGTGATGGATGAAGGTTGG+GGG | + | chr8_2:52254572-52254591 | None:intergenic | 50.0% |
| !! | TGAGAGGAGGTGTTTGAGGA+GGG | + | chr8_2:52254617-52254636 | None:intergenic | 50.0% |
| !! | TTGAGAGGAGGTGTTTGAGG+AGG | + | chr8_2:52254618-52254637 | None:intergenic | 50.0% |
| ! | GAATGGTTCGGATTGGGATC+GGG | + | chr8_2:52254641-52254660 | None:intergenic | 50.0% |
| !! | GGTTACGCATCGCTTTGAGA+TGG | + | chr8_2:52254665-52254684 | None:intergenic | 50.0% |
| !! | GGATTGGTTACTCCTATGGG+TGG | - | chr8_2:52254898-52254917 | Msa1254230:CDS | 50.0% |
| TTGGTTACTCCTATGGGTGG+TGG | - | chr8_2:52254901-52254920 | Msa1254230:CDS | 50.0% | |
| GAACTAACACCACCACCCAT+AGG | + | chr8_2:52254913-52254932 | None:intergenic | 50.0% | |
| TCATGTCGAGTAGGTAACCC+AGG | + | chr8_2:52255000-52255019 | None:intergenic | 50.0% | |
| !! | CGGTGTCGTCGAAAGTCTTA+AGG | - | chr8_2:52255092-52255111 | Msa1254230:CDS | 50.0% |
| TTGTAGCCGACACCACTTAG+TGG | - | chr8_2:52255181-52255200 | Msa1254230:intron | 50.0% | |
| TGTAGCCGACACCACTTAGT+GGG | - | chr8_2:52255182-52255201 | Msa1254230:intron | 50.0% | |
| CATCAAAAGCCTCTTCCCTC+GGG | + | chr8_2:52255693-52255712 | None:intergenic | 50.0% | |
| CCATCAAAAGCCTCTTCCCT+CGG | + | chr8_2:52255694-52255713 | None:intergenic | 50.0% | |
| !!! | AGCTTTTGCTCTGGGGTTAC+GGG | + | chr8_2:52255790-52255809 | None:intergenic | 50.0% |
| !!! | GAGCTTTTGCTCTGGGGTTA+CGG | + | chr8_2:52255791-52255810 | None:intergenic | 50.0% |
| ! | CCTCAAGAGCTTTTGCTCTG+GGG | + | chr8_2:52255797-52255816 | None:intergenic | 50.0% |
| ! | CCCTCAAGAGCTTTTGCTCT+GGG | + | chr8_2:52255798-52255817 | None:intergenic | 50.0% |
| CCCAGAGCAAAAGCTCTTGA+GGG | - | chr8_2:52255795-52255814 | Msa1254230:intron | 50.0% | |
| ! | TCCCTCAAGAGCTTTTGCTC+TGG | + | chr8_2:52255799-52255818 | None:intergenic | 50.0% |
| GCAAAAGCTCTTGAGGGAAG+AGG | - | chr8_2:52255801-52255820 | Msa1254230:intron | 50.0% | |
| ! | AAGGAGAAGGCATGGCAAGA+CGG | + | chr8_2:52255886-52255905 | None:intergenic | 50.0% |
| CGCTAATCAGCACGTTTGGT+TGG | - | chr8_2:52255959-52255978 | Msa1254230:intron | 50.0% | |
| ! | GTTGAAATGGTGTCAAGGCC+AGG | - | chr8_2:52256072-52256091 | Msa1254230:intron | 50.0% |
| !! | GCTTGCGGATGGTTTGTTCT+TGG | - | chr8_2:52256463-52256482 | Msa1254230:intron | 50.0% |
| !! | CTGCTGGTTCAGTCAAAGGT+TGG | - | chr8_2:52256928-52256947 | Msa1254230:intron | 50.0% |
| GGTCAAATGGAGGCAGAGAA+AGG | + | chr8_2:52257145-52257164 | None:intergenic | 50.0% | |
| GAAGTTTAGAGGGAAGGGAG+GGG | - | chr8_2:52257404-52257423 | Msa1254230:intron | 50.0% | |
| CTCCAGGGTTGTTCTTTGGA+TGG | + | chr8_2:52257578-52257597 | None:intergenic | 50.0% | |
| CATCCAAAGAACAACCCTGG+AGG | - | chr8_2:52257576-52257595 | Msa1254230:CDS | 50.0% | |
| CATCCTCCAGGGTTGTTCTT+TGG | + | chr8_2:52257582-52257601 | None:intergenic | 50.0% | |
| CTAGTTGCAAATACTGCGGC+AGG | - | chr8_2:52257834-52257853 | Msa1254230:intron | 50.0% | |
| CCTAGACAGTGAGTCAACAG+AGG | + | chr8_2:52258186-52258205 | None:intergenic | 50.0% | |
| !! | CCTCTGTTGACTCACTGTCT+AGG | - | chr8_2:52258183-52258202 | Msa1254230:intron | 50.0% |
| GGCAAACTAGACTAGGCCAT+AGG | - | chr8_2:52258966-52258985 | Msa1254230:intron | 50.0% | |
| ! | TATGTCGGGTTGTCTGACAG+AGG | + | chr8_2:52258992-52259011 | None:intergenic | 50.0% |
| !! | GGTGGTGGTGAAAGTACTGA+TGG | - | chr8_2:52259066-52259085 | Msa1254230:CDS | 50.0% |
| ! | TACTGATGGTAGGTTGGAGC+TGG | - | chr8_2:52259080-52259099 | Msa1254230:CDS | 50.0% |
| ! | GTAGGTTGGAGCTGGTTGTT+GGG | - | chr8_2:52259088-52259107 | Msa1254230:CDS | 50.0% |
| TGGAGCTGGTTGTTGGGTTT+AGG | - | chr8_2:52259094-52259113 | Msa1254230:CDS | 50.0% | |
| GGAGCTGGTTGTTGGGTTTA+GGG | - | chr8_2:52259095-52259114 | Msa1254230:CDS | 50.0% | |
| ! | GTTGTTGGGTTTAGGGCTTC+TGG | - | chr8_2:52259102-52259121 | Msa1254230:CDS | 50.0% |
| TGAGCATGCTGTGTTTGAGC+AGG | - | chr8_2:52259229-52259248 | Msa1254230:CDS | 50.0% | |
| GAGCATGCTGTGTTTGAGCA+GGG | - | chr8_2:52259230-52259249 | Msa1254230:CDS | 50.0% | |
| GGTGCTTCAGCAGGAAATGT+TGG | - | chr8_2:52259251-52259270 | Msa1254230:CDS | 50.0% | |
| !! | ATGAGAGAAGAAGCGCCACT+GGG | + | chr8_2:52259310-52259329 | None:intergenic | 50.0% |
| GGTCAGCAAATGCAGGAAAC+TGG | + | chr8_2:52259355-52259374 | None:intergenic | 50.0% | |
| ! | TCCTGCATTTGCTGACCGTT+TGG | - | chr8_2:52259358-52259377 | Msa1254230:CDS | 50.0% |
| TCCAAACGGTCAGCAAATGC+AGG | + | chr8_2:52259362-52259381 | None:intergenic | 50.0% | |
| !! | AGAGGGCAAGTATCGGACAA+AGG | - | chr8_2:52259406-52259425 | Msa1254230:CDS | 50.0% |
| ! | TGCATCGACAACTTCTTGGG+TGG | + | chr8_2:52259450-52259469 | None:intergenic | 50.0% |
| GGGGAGTGATTGGAATGACC+CGG | + | chr8_2:52254421-52254440 | None:intergenic | 55.0% | |
| ! | GGGGGTGTGAGTGTGAGATT+TGG | + | chr8_2:52254533-52254552 | None:intergenic | 55.0% |
| ! | GAGGTGTTTGAGGAGGGGTA+TGG | + | chr8_2:52254611-52254630 | None:intergenic | 55.0% |
| !! | GAGAGGAGGTGTTTGAGGAG+GGG | + | chr8_2:52254616-52254635 | None:intergenic | 55.0% |
| !! | GGGTTGAGAGGAGGTGTTTG+AGG | + | chr8_2:52254621-52254640 | None:intergenic | 55.0% |
| !! | ATTGGGATCGGGTTGAGAGG+AGG | + | chr8_2:52254630-52254649 | None:intergenic | 55.0% |
| GTAACCTACATGCACCGTCC+CGG | - | chr8_2:52254679-52254698 | Msa1254230:CDS | 55.0% | |
| CATTAGTTGCTCAACGGCGC+CGG | + | chr8_2:52254764-52254783 | None:intergenic | 55.0% | |
| ! | CCTCGGGAGATTTTGCTCTG+GGG | + | chr8_2:52255677-52255696 | None:intergenic | 55.0% |
| ! | CCCTCGGGAGATTTTGCTCT+GGG | + | chr8_2:52255678-52255697 | None:intergenic | 55.0% |
| CCCAGAGCAAAATCTCCCGA+GGG | - | chr8_2:52255675-52255694 | Msa1254230:intron | 55.0% | |
| ! | TCCCTCGGGAGATTTTGCTC+TGG | + | chr8_2:52255679-52255698 | None:intergenic | 55.0% |
| GCAAAATCTCCCGAGGGAAG+AGG | - | chr8_2:52255681-52255700 | Msa1254230:intron | 55.0% | |
| ! | CCGAGGGAAGAGGCTTTTGA+TGG | - | chr8_2:52255691-52255710 | Msa1254230:intron | 55.0% |
| !!! | GCTTTTGCTCTGGGGTTACG+GGG | + | chr8_2:52255789-52255808 | None:intergenic | 55.0% |
| CCCCAGAGCAAAAGCTCTTG+AGG | - | chr8_2:52255794-52255813 | Msa1254230:intron | 55.0% | |
| TGGCAAGACGGAGCCATTCA+AGG | + | chr8_2:52255874-52255893 | None:intergenic | 55.0% | |
| GAGGTTGCCACCAAGTATCC+TGG | - | chr8_2:52256497-52256516 | Msa1254230:intron | 55.0% | |
| GCCCGAGCAGTTTGATGTCA+TGG | - | chr8_2:52256574-52256593 | Msa1254230:intron | 55.0% | |
| ! | AATACTGCGGCAGGCATTGC+TGG | - | chr8_2:52257843-52257862 | Msa1254230:intron | 55.0% |
| TGTTCACGTCTCAGCACGAC+TGG | + | chr8_2:52258513-52258532 | None:intergenic | 55.0% | |
| GGTTGTCTGACAGAGGCCTA+TGG | + | chr8_2:52258985-52259004 | None:intergenic | 55.0% | |
| ! | GGTAGGTTGGAGCTGGTTGT+TGG | - | chr8_2:52259087-52259106 | Msa1254230:CDS | 55.0% |
| ! | TTTGAGCAGGGTGCTTCAGC+AGG | - | chr8_2:52259242-52259261 | Msa1254230:CDS | 55.0% |
| !! | GATGAGAGAAGAAGCGCCAC+TGG | + | chr8_2:52259311-52259330 | None:intergenic | 55.0% |
| !! | CGGATTGGGATCGGGTTGAG+AGG | + | chr8_2:52254633-52254652 | None:intergenic | 60.0% |
| GATTAGGGTTACGGGACGGG+GGG | + | chr8_2:52254713-52254732 | None:intergenic | 60.0% | |
| GGATTAGGGTTACGGGACGG+GGG | + | chr8_2:52254714-52254733 | None:intergenic | 60.0% | |
| GGGATTAGGGTTACGGGACG+GGG | + | chr8_2:52254715-52254734 | None:intergenic | 60.0% | |
| GGGGATTAGGGTTACGGGAC+GGG | + | chr8_2:52254716-52254735 | None:intergenic | 60.0% | |
| CGGGGATTAGGGTTACGGGA+CGG | + | chr8_2:52254717-52254736 | None:intergenic | 60.0% | |
| CGTCCCGTAACCCTAATCCC+CGG | - | chr8_2:52254715-52254734 | Msa1254230:CDS | 60.0% | |
| TCGCCGGGGATTAGGGTTAC+GGG | + | chr8_2:52254721-52254740 | None:intergenic | 60.0% | |
| GTCGCCGGGGATTAGGGTTA+CGG | + | chr8_2:52254722-52254741 | None:intergenic | 60.0% | |
| GTAACCCTAATCCCCGGCGA+CGG | - | chr8_2:52254721-52254740 | Msa1254230:CDS | 60.0% | |
| TAACCCTAATCCCCGGCGAC+GGG | - | chr8_2:52254722-52254741 | Msa1254230:CDS | 60.0% | |
| GGGATCGGACCACTCGTAAC+CGG | - | chr8_2:52254742-52254761 | Msa1254230:CDS | 60.0% | |
| CGGCGCCGTTGAGCAACTAA+TGG | - | chr8_2:52254762-52254781 | Msa1254230:CDS | 60.0% | |
| CCCCAGAGCAAAATCTCCCG+AGG | - | chr8_2:52255674-52255693 | Msa1254230:intron | 60.0% | |
| TACATGCACCGTCCCGGCGA+CGG | - | chr8_2:52254685-52254704 | Msa1254230:CDS | 65.0% | |
| GATCCCGTCGCCGGGGATTA+GGG | + | chr8_2:52254728-52254747 | None:intergenic | 65.0% | |
| CTAATCCCCGGCGACGGGAT+CGG | - | chr8_2:52254727-52254746 | Msa1254230:CDS | 65.0% | |
| !! | TCAACGGCGCCGGTTACGAG+TGG | + | chr8_2:52254754-52254773 | None:intergenic | 65.0% |
| ! | ACTGCGGCAGGCATTGCTGG+AGG | - | chr8_2:52257846-52257865 | Msa1254230:intron | 65.0% |
| ! | GCAGGCATTGCTGGAGGCAC+TGG | - | chr8_2:52257852-52257871 | Msa1254230:intron | 65.0% |
| !! | GGAGGCACTGGAGTCATGCC+AGG | - | chr8_2:52257864-52257883 | Msa1254230:intron | 65.0% |
| ! | GGCACTGGAGTCATGCCAGG+AGG | - | chr8_2:52257867-52257886 | Msa1254230:intron | 65.0% |
| GTCGCCGGGACGGTGCATGT+AGG | + | chr8_2:52254686-52254705 | None:intergenic | 70.0% | |
| CGATCCCGTCGCCGGGGATT+AGG | + | chr8_2:52254729-52254748 | None:intergenic | 70.0% | |
| AGTGGTCCGATCCCGTCGCC+GGG | + | chr8_2:52254736-52254755 | None:intergenic | 70.0% | |
| GAGTGGTCCGATCCCGTCGC+CGG | + | chr8_2:52254737-52254756 | None:intergenic | 70.0% | |
| GTGGTCCGATCCCGTCGCCG+GGG | + | chr8_2:52254735-52254754 | None:intergenic | 75.0% | |
| ! | GGGGGGTTCCGTCGCCGGGA+CGG | + | chr8_2:52254696-52254715 | None:intergenic | 80.0% |
| ! | GGACGGGGGGTTCCGTCGCC+GGG | + | chr8_2:52254700-52254719 | None:intergenic | 80.0% |
| ! | GGGACGGGGGGTTCCGTCGC+CGG | + | chr8_2:52254701-52254720 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 52254371 | 52259772 | 52254371 | ID=Msa1254230;Name=Msa1254230 |
| chr8_2 | mRNA | 52254371 | 52259772 | 52254371 | ID=Msa1254230-mRNA-1;Parent=Msa1254230;Name=Msa1254230-mRNA-1;_AED=0.04;_eAED=0.04;_QI=221|0.2|0.66|0.66|1|1|6|282|416 |
| chr8_2 | exon | 52254371 | 52254927 | 52254371 | ID=Msa1254230-mRNA-1:exon:15991;Parent=Msa1254230-mRNA-1 |
| chr8_2 | exon | 52255056 | 52255112 | 52255056 | ID=Msa1254230-mRNA-1:exon:15990;Parent=Msa1254230-mRNA-1 |
| chr8_2 | exon | 52256255 | 52256333 | 52256255 | ID=Msa1254230-mRNA-1:exon:15989;Parent=Msa1254230-mRNA-1 |
| chr8_2 | exon | 52257548 | 52257787 | 52257548 | ID=Msa1254230-mRNA-1:exon:15988;Parent=Msa1254230-mRNA-1 |
| chr8_2 | exon | 52258481 | 52258558 | 52258481 | ID=Msa1254230-mRNA-1:exon:15987;Parent=Msa1254230-mRNA-1 |
| chr8_2 | exon | 52259030 | 52259772 | 52259030 | ID=Msa1254230-mRNA-1:exon:15986;Parent=Msa1254230-mRNA-1 |
| chr8_2 | five_prime_UTR | 52259552 | 52259772 | 52259552 | ID=Msa1254230-mRNA-1:five_prime_utr;Parent=Msa1254230-mRNA-1 |
| chr8_2 | CDS | 52259030 | 52259551 | 52259030 | ID=Msa1254230-mRNA-1:cds;Parent=Msa1254230-mRNA-1 |
| chr8_2 | CDS | 52258481 | 52258558 | 52258481 | ID=Msa1254230-mRNA-1:cds;Parent=Msa1254230-mRNA-1 |
| chr8_2 | CDS | 52257548 | 52257787 | 52257548 | ID=Msa1254230-mRNA-1:cds;Parent=Msa1254230-mRNA-1 |
| chr8_2 | CDS | 52256255 | 52256333 | 52256255 | ID=Msa1254230-mRNA-1:cds;Parent=Msa1254230-mRNA-1 |
| chr8_2 | CDS | 52255056 | 52255112 | 52255056 | ID=Msa1254230-mRNA-1:cds;Parent=Msa1254230-mRNA-1 |
| chr8_2 | CDS | 52254653 | 52254927 | 52254653 | ID=Msa1254230-mRNA-1:cds;Parent=Msa1254230-mRNA-1 |
| chr8_2 | three_prime_UTR | 52254371 | 52254652 | 52254371 | ID=Msa1254230-mRNA-1:three_prime_utr;Parent=Msa1254230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
