AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1193690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1193690 MtrunA17_Chr5g0413571 72.593 135 37 0 27 161 1 135 2.16e-69 206
Msa1193690 MtrunA17_Chr2g0282661 68.841 138 37 2 31 162 14 151 2.59e-65 196
Msa1193690 MtrunA17_Chr8g0365411 75.000 136 1 1 27 162 1 103 3.91e-64 191
Msa1193690 MtrunA17_Chr2g0324821 69.697 132 36 1 35 162 8 139 3.99e-62 187
Msa1193690 MtrunA17_Chr6g0476691 86.000 100 13 1 63 162 1 99 3.25e-56 171
Msa1193690 MtrunA17_Chr5g0438061 51.200 125 52 2 37 160 103 219 5.22e-32 114
Msa1193690 MtrunA17_Chr5g0438041 49.612 129 52 4 37 160 5 125 5.68e-28 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1193690 AT1G23750.1 78.102 137 29 1 27 162 1 137 5.68e-79 231
Msa1193690 AT1G10590.2 77.372 137 28 2 27 160 1 137 2.07e-74 219
Msa1193690 AT1G10590.1 77.372 137 28 2 27 160 1 137 2.07e-74 219
Msa1193690 AT1G10590.3 77.372 137 28 2 27 160 15 151 2.42e-74 219
Msa1193690 AT2G33845.1 72.868 129 34 1 35 162 53 181 4.83e-63 192
Msa1193690 AT1G23750.2 81.000 100 19 0 63 162 1 100 1.16e-58 178
Msa1193690 AT4G28440.1 65.909 132 39 3 35 160 18 149 4.64e-58 178
Msa1193690 AT1G03810.1 61.417 127 46 2 35 158 15 141 5.10e-51 160

Find 67 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTTTAGTTGGTTATAATT+AGG 0.171736 8_1:-40136981 None:intergenic
TTCACTTCCAGTTTCATTTC+AGG 0.179415 8_1:+40131867 Msa1193690:CDS
TCTAACATTATTATTAATTA+TGG 0.199924 8_1:-40137059 None:intergenic
CAACTTCTACTGTGTTATAA+TGG 0.207399 8_1:+40136672 Msa1193690:three_prime_UTR
TAACAAGTTCATATTCAATA+AGG 0.264256 8_1:-40136618 None:intergenic
ATCAACTAGGAAAAGAGATT+TGG 0.329944 8_1:+40136710 Msa1193690:three_prime_UTR
CAACTGGAAGAAATAATTCT+TGG 0.335285 8_1:-40136744 None:intergenic
AACTTCTACTGTGTTATAAT+GGG 0.350186 8_1:+40136673 Msa1193690:three_prime_UTR
TAAATGAAAGATAAGGGAAT+TGG 0.356242 8_1:+40136814 Msa1193690:three_prime_UTR
AAGGATTACATGAAGTATAA+AGG 0.379648 8_1:-40136941 None:intergenic
AATCTGACCTGAAATGAAAC+TGG 0.387919 8_1:-40131874 None:intergenic
TTGCTTTAAATGAAAGATAA+GGG 0.392170 8_1:+40136808 Msa1193690:three_prime_UTR
CAAGAAAATTACGCTTTAGT+TGG 0.400540 8_1:-40136992 None:intergenic
AACAAGTTCATATTCAATAA+GGG 0.410549 8_1:-40136617 None:intergenic
CACTAGTCCCCGGTCGAAGC+TGG 0.415538 8_1:-40132240 None:intergenic
GGTAGGAAACTAGGAATCAT+TGG 0.432403 8_1:-40137086 None:intergenic
GATGCGAATTGCTGAAAGTT+TGG 0.443876 8_1:+40132342 Msa1193690:CDS
ATTAGAACCACTGATTCAAC+TGG 0.449927 8_1:-40136760 None:intergenic
ATTATGGCGGAGGCAAAACC+TGG 0.453548 8_1:+40132187 Msa1193690:CDS
TGAGGCTTGCTGTGGACAAA+TGG 0.453565 8_1:+40136536 Msa1193690:CDS
AGTTTGGTGGGTGATGAGAC+TGG 0.455465 8_1:+40132358 Msa1193690:CDS
ATTGCTTTAAATGAAAGATA+AGG 0.462486 8_1:+40136807 Msa1193690:three_prime_UTR
GACCTTTAGATCTCATGCAC+TGG 0.475661 8_1:+40136894 Msa1193690:three_prime_UTR
GAGGCTTGCTGTGGACAAAT+GGG 0.484723 8_1:+40136537 Msa1193690:CDS
AATGTTGTGGAGTAACTTGT+TGG 0.490657 8_1:+40136640 Msa1193690:exon
TTCCAGTGCATGAGATCTAA+AGG 0.509380 8_1:-40136896 None:intergenic
GTTCATATTCAATAAGGGAC+AGG 0.511339 8_1:-40136612 None:intergenic
AAGGTCGGCTTTCTCAATCC+AGG 0.513274 8_1:-40132205 None:intergenic
TCCTTGACAGTGAAATCAGC+AGG 0.523551 8_1:-40136580 None:intergenic
TAAGGTCGACCAGCTTCGAC+CGG 0.525845 8_1:+40132231 Msa1193690:CDS
TGACGAGGCTGAGGACCATC+GGG 0.535037 8_1:-40132319 None:intergenic
CTGACGAGGCTGAGGACCAT+CGG 0.535047 8_1:-40132320 None:intergenic
TTAGGTTAAGATTATGGCGG+AGG 0.537059 8_1:+40132177 Msa1193690:intron
ATGCAGAAGGGTCGTCCCGA+TGG 0.542463 8_1:+40132304 Msa1193690:CDS
TCCTGCTGATTTCACTGTCA+AGG 0.542969 8_1:+40136579 Msa1193690:CDS
CAGCTTCGACCGGGGACTAG+TGG 0.552789 8_1:+40132241 Msa1193690:CDS
ATATGAACTTGTTAATGTTG+TGG 0.553436 8_1:+40136627 Msa1193690:CDS
ATTCGCATCTGACGAGGCTG+AGG 0.553923 8_1:-40132328 None:intergenic
TACTAAGATGGTGATGCAGA+AGG 0.561427 8_1:+40132291 Msa1193690:CDS
ATTTCTTCCAGTTGAATCAG+TGG 0.565114 8_1:+40136753 Msa1193690:three_prime_UTR
GAGAAAGCCGACCTTCACTA+AGG 0.566200 8_1:+40132213 Msa1193690:CDS
TAGTAGAGCCATCTTTCAGC+AGG 0.566386 8_1:-40136471 None:intergenic
GCACTGGAATATATTATATG+TGG 0.566669 8_1:+40136910 Msa1193690:three_prime_UTR
TTTACTGCAAGAAATGATCA+AGG 0.569259 8_1:+40132391 Msa1193690:CDS
TTTCTTGTGCTTTCTCAGTG+TGG 0.569415 8_1:+40137008 Msa1193690:three_prime_UTR
AAGGTCGACCAGCTTCGACC+GGG 0.573389 8_1:+40132232 Msa1193690:CDS
AGAGTGTGGCCACTAGTCCC+CGG 0.585454 8_1:-40132250 None:intergenic
GAAAAGAGATTTGGAAGCAG+TGG 0.593894 8_1:+40136719 Msa1193690:three_prime_UTR
GTTTGGTGGGTGATGAGACT+GGG 0.596348 8_1:+40132359 Msa1193690:CDS
CGAATTGCTGAAAGTTTGGT+GGG 0.602856 8_1:+40132346 Msa1193690:CDS
AGGATCAATGAGGCTTGCTG+TGG 0.611605 8_1:+40136528 Msa1193690:CDS
ACTAAGATGGTGATGCAGAA+GGG 0.612291 8_1:+40132292 Msa1193690:CDS
TCAGCAATTCGCATCTGACG+AGG 0.613833 8_1:-40132334 None:intergenic
GCGAATTGCTGAAAGTTTGG+TGG 0.616185 8_1:+40132345 Msa1193690:CDS
CAAGGTGGTGAATACTAAGA+TGG 0.621326 8_1:+40132279 Msa1193690:CDS
TGGCCACACTCTGACTGTCA+AGG 0.624809 8_1:+40132261 Msa1193690:CDS
AACTGGAAGTGAAACTGCAA+AGG 0.625153 8_1:-40131857 None:intergenic
ACATGTTTAAAGGATCAATG+AGG 0.632902 8_1:+40136518 Msa1193690:CDS
ATAAAGCAAATCCATCAACT+AGG 0.636756 8_1:+40136697 Msa1193690:three_prime_UTR
GTGGTGTAAAAGTGTCTAAG+TGG 0.639270 8_1:+40137027 Msa1193690:three_prime_UTR
AAGCTGGTCGACCTTAGTGA+AGG 0.639708 8_1:-40132224 None:intergenic
CCACCTTGACAGTCAGAGTG+TGG 0.645365 8_1:-40132264 None:intergenic
CAGGATCTGTTACTTCGACA+CGG 0.653882 8_1:-40136561 None:intergenic
AGGAAACTAGGAATCATTGG+AGG 0.664520 8_1:-40137083 None:intergenic
TGGTCGACCTTAGTGAAGGT+CGG 0.669122 8_1:-40132220 None:intergenic
CCACACTCTGACTGTCAAGG+TGG 0.685740 8_1:+40132264 Msa1193690:CDS
AGGCTTGCTGTGGACAAATG+GGG 0.694034 8_1:+40136538 Msa1193690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGAATCTAAATATATTTA+AGG - chr8_1:40133208-40133227 None:intergenic 10.0%
!! AAACAAATAAATGAAAAAAA+AGG + chr8_1:40135099-40135118 Msa1193690:intron 10.0%
!! TCTAACATTATTATTAATTA+TGG - chr8_1:40137062-40137081 None:intergenic 10.0%
!! TCCAACATTATATTAATTTA+AGG + chr8_1:40132073-40132092 Msa1193690:intron 15.0%
!! ACCTTAAATTAATATAATGT+TGG - chr8_1:40132077-40132096 None:intergenic 15.0%
!!! TCATAGTATGTTTTTAATTA+TGG - chr8_1:40132769-40132788 None:intergenic 15.0%
!! ATCTAAATATATTTAAGGAT+AGG - chr8_1:40133203-40133222 None:intergenic 15.0%
!! AATAAATGAACACATAAAAT+AGG - chr8_1:40133344-40133363 None:intergenic 15.0%
!! AAATTAAGTTTCTGTTTAAA+TGG - chr8_1:40134159-40134178 None:intergenic 15.0%
!! CAAATATAAATCAAGAAAAA+TGG - chr8_1:40134707-40134726 None:intergenic 15.0%
!!! ACCAAAAAACTTATAATTTT+GGG - chr8_1:40135564-40135583 None:intergenic 15.0%
!!! AACCAAAAAACTTATAATTT+TGG - chr8_1:40135565-40135584 None:intergenic 15.0%
!! TAGTTATTTAAAAAGTGAAT+TGG + chr8_1:40135595-40135614 Msa1193690:intron 15.0%
!!! TGTTTTGTTATCTTTAATTA+TGG + chr8_1:40136855-40136874 Msa1193690:three_prime_UTR 15.0%
!! ATAATACAAGTGAATAAACA+AGG - chr8_1:40131937-40131956 None:intergenic 20.0%
!! TCGAAAAAATTTGCATAAAA+AGG - chr8_1:40131990-40132009 None:intergenic 20.0%
!! TTGATTAATGAACAAAACTA+GGG - chr8_1:40132049-40132068 None:intergenic 20.0%
!! ATTGATTAATGAACAAAACT+AGG - chr8_1:40132050-40132069 None:intergenic 20.0%
!!! TTTGGTTTTTGTAAGATTTT+AGG + chr8_1:40132159-40132178 Msa1193690:intron 20.0%
!!! AAGATTTTAGGTTAAGATTA+TGG + chr8_1:40132171-40132190 Msa1193690:intron 20.0%
!!! GTTATGAACTTAAATTTTAC+AGG - chr8_1:40132804-40132823 None:intergenic 20.0%
!!! ACTACAATTAGTATTTTACT+CGG + chr8_1:40133259-40133278 Msa1193690:intron 20.0%
!!! GTGTCGTATTATTATTTTTT+TGG + chr8_1:40133300-40133319 Msa1193690:intron 20.0%
!!! AACACATCTCTAATAAATTT+TGG - chr8_1:40133430-40133449 None:intergenic 20.0%
!!! TTTTTAAGAATTGGTGATTA+AGG - chr8_1:40133798-40133817 None:intergenic 20.0%
!! TGATGACAGAAATAAATAAT+TGG + chr8_1:40133894-40133913 Msa1193690:intron 20.0%
!!! ATTTTTACTTTTAACAGCTT+TGG - chr8_1:40134002-40134021 None:intergenic 20.0%
!!! AAACAGAAACTTAATTTGAT+TGG + chr8_1:40134162-40134181 Msa1193690:intron 20.0%
!!! AGATGTGGAATTATTTTATT+AGG - chr8_1:40134492-40134511 None:intergenic 20.0%
!! TTTGTTAATTTACTTAGATG+TGG - chr8_1:40134507-40134526 None:intergenic 20.0%
!! TCTTCATTATTCAAAGATTA+TGG - chr8_1:40134898-40134917 None:intergenic 20.0%
!!! ACCCAAAATTATAAGTTTTT+TGG + chr8_1:40135560-40135579 Msa1193690:intron 20.0%
!!! TGTGAATTTTCAAATTTTCT+TGG + chr8_1:40135805-40135824 Msa1193690:intron 20.0%
!!! GTGAATTTTCAAATTTTCTT+GGG + chr8_1:40135806-40135825 Msa1193690:intron 20.0%
!!! TGAATTTTCAAATTTTCTTG+GGG + chr8_1:40135807-40135826 Msa1193690:intron 20.0%
!!! AATGTTATTTGTAATTTGCA+AGG + chr8_1:40135850-40135869 Msa1193690:intron 20.0%
!!! TTGCATTTGAAATACAAATA+TGG + chr8_1:40136196-40136215 Msa1193690:intron 20.0%
!! AACAAGTTCATATTCAATAA+GGG - chr8_1:40136620-40136639 None:intergenic 20.0%
!! TAACAAGTTCATATTCAATA+AGG - chr8_1:40136621-40136640 None:intergenic 20.0%
!!! ATTGCTTTAAATGAAAGATA+AGG + chr8_1:40136807-40136826 Msa1193690:three_prime_UTR 20.0%
!!! TTGCTTTAAATGAAAGATAA+GGG + chr8_1:40136808-40136827 Msa1193690:three_prime_UTR 20.0%
! ACAAGGTTAATTAACATGAA+TGG - chr8_1:40131920-40131939 None:intergenic 25.0%
!! GTTAGATTTTTCTTTTCTAG+TGG + chr8_1:40132121-40132140 Msa1193690:intron 25.0%
!!! ATTTTAGGTTAAGATTATGG+CGG + chr8_1:40132174-40132193 Msa1193690:intron 25.0%
! TTAAAACAACATCACGAATT+TGG - chr8_1:40132478-40132497 None:intergenic 25.0%
!!! TGCTCTGTTTTTATTTATCT+AGG + chr8_1:40132657-40132676 Msa1193690:intron 25.0%
! AGACATTTAAACAAGTTTGA+CGG - chr8_1:40132691-40132710 None:intergenic 25.0%
! CTAAGTAAAATCTAGATTTC+CGG + chr8_1:40132844-40132863 Msa1193690:intron 25.0%
! TAAGTAAAATCTAGATTTCC+GGG + chr8_1:40132845-40132864 Msa1193690:intron 25.0%
!!! CTTTGTATCAATTAAGTTGA+TGG + chr8_1:40132912-40132931 Msa1193690:intron 25.0%
!!! AAAACAAAACATTGACTCAA+GGG - chr8_1:40132997-40133016 None:intergenic 25.0%
!! ATTAGCTTAAATACTAGTAG+AGG - chr8_1:40133053-40133072 None:intergenic 25.0%
! TTAATATCATGAGAACTCAA+AGG - chr8_1:40133400-40133419 None:intergenic 25.0%
!!! CTTATTAAGCACTAGTTTTT+AGG + chr8_1:40133767-40133786 Msa1193690:intron 25.0%
!!! GGATAGTTCTTTTTAAGAAT+TGG - chr8_1:40133807-40133826 None:intergenic 25.0%
! TCTTAAAAAGAACTATCCAT+TGG + chr8_1:40133809-40133828 Msa1193690:intron 25.0%
! AAACAATATAAGCACTTGTT+GGG + chr8_1:40133868-40133887 Msa1193690:intron 25.0%
! AATATCCTATCTGTAACTAT+TGG - chr8_1:40134294-40134313 None:intergenic 25.0%
! TTTATTACAACACAAGTAAC+AGG + chr8_1:40134430-40134449 Msa1193690:intron 25.0%
!!! TTATTTTATTAGGAACTGGT+TGG - chr8_1:40134482-40134501 None:intergenic 25.0%
!!! GGAATTATTTTATTAGGAAC+TGG - chr8_1:40134486-40134505 None:intergenic 25.0%
! TAAAGCCCATTAATACAATT+GGG - chr8_1:40134570-40134589 None:intergenic 25.0%
! ATAAAGCCCATTAATACAAT+TGG - chr8_1:40134571-40134590 None:intergenic 25.0%
! ATCAAGAAAAATGGTTAATC+AGG - chr8_1:40134698-40134717 None:intergenic 25.0%
! TTAATACCTAGTACATAGTA+GGG - chr8_1:40134841-40134860 None:intergenic 25.0%
! ATTAATACCTAGTACATAGT+AGG - chr8_1:40134842-40134861 None:intergenic 25.0%
! CATTTACAACATATATCAAG+TGG - chr8_1:40135075-40135094 None:intergenic 25.0%
! CACTTGATATATGTTGTAAA+TGG + chr8_1:40135073-40135092 Msa1193690:intron 25.0%
! TTCTTAAACCAAGATAACTA+TGG + chr8_1:40135696-40135715 Msa1193690:intron 25.0%
! TCTTAAACCAAGATAACTAT+GGG + chr8_1:40135697-40135716 Msa1193690:intron 25.0%
! AAGAATAGTACTAGAATACA+AGG + chr8_1:40135767-40135786 Msa1193690:intron 25.0%
! AATGATTCCATAAAAAAGAC+AGG - chr8_1:40136006-40136025 None:intergenic 25.0%
!! TTTTTATGGAATCATTGTGT+TGG + chr8_1:40136010-40136029 Msa1193690:intron 25.0%
! TTATTCTTCAATAACCTATG+AGG - chr8_1:40136099-40136118 None:intergenic 25.0%
!!! GACAAAGTTCAATTTTTTTG+TGG + chr8_1:40136139-40136158 Msa1193690:intron 25.0%
!! TTCAGCAATTTAACTTAACA+TGG - chr8_1:40136399-40136418 None:intergenic 25.0%
! GCAAAAATTGACATGTTTAA+AGG + chr8_1:40136508-40136527 Msa1193690:CDS 25.0%
!!! ATATGAACTTGTTAATGTTG+TGG + chr8_1:40136627-40136646 Msa1193690:CDS 25.0%
! AACTTCTACTGTGTTATAAT+GGG + chr8_1:40136673-40136692 Msa1193690:three_prime_UTR 25.0%
! TAAATGAAAGATAAGGGAAT+TGG + chr8_1:40136814-40136833 Msa1193690:three_prime_UTR 25.0%
! ACAAAACAAAAAGCAAGATT+TGG - chr8_1:40136843-40136862 None:intergenic 25.0%
! AAGGATTACATGAAGTATAA+AGG - chr8_1:40136944-40136963 None:intergenic 25.0%
!! GGAGTATTAAAAGCAAAAAA+AGG - chr8_1:40136963-40136982 None:intergenic 25.0%
TTTACTGCAAGAAATGATCA+AGG + chr8_1:40132391-40132410 Msa1193690:CDS 30.0%
AACAATTGTATAGACCAAAC+AGG - chr8_1:40132455-40132474 None:intergenic 30.0%
AAATACGCAGTTACTACTAT+TGG - chr8_1:40132552-40132571 None:intergenic 30.0%
GTTATTACGTTCGTTAATTC+TGG + chr8_1:40132735-40132754 Msa1193690:intron 30.0%
TTTGTTGAAAGCAGAATCAT+AGG - chr8_1:40132967-40132986 None:intergenic 30.0%
TATGATTCTGCTTTCAACAA+AGG + chr8_1:40132966-40132985 Msa1193690:intron 30.0%
ATGATTCTGCTTTCAACAAA+GGG + chr8_1:40132967-40132986 Msa1193690:intron 30.0%
!! GAAAACAAAACATTGACTCA+AGG - chr8_1:40132998-40133017 None:intergenic 30.0%
ATTCTAACTACTCACTCTTT+AGG + chr8_1:40133120-40133139 Msa1193690:intron 30.0%
TCCTTACATGATGAAAATGA+AGG + chr8_1:40133236-40133255 Msa1193690:intron 30.0%
! TCCTTCATTTTCATCATGTA+AGG - chr8_1:40133240-40133259 None:intergenic 30.0%
CAGTTCTTCATTACACAAAT+AGG - chr8_1:40133459-40133478 None:intergenic 30.0%
TGTGTAATGAAGAACTGAAT+TGG + chr8_1:40133462-40133481 Msa1193690:intron 30.0%
TAAAGAATGCAAAATACCAC+TGG - chr8_1:40133526-40133545 None:intergenic 30.0%
AGTATAGATGGAACATCAAA+GGG - chr8_1:40133684-40133703 None:intergenic 30.0%
AAGTATAGATGGAACATCAA+AGG - chr8_1:40133685-40133704 None:intergenic 30.0%
!! TAATGAATAAGCACTGAATC+AGG - chr8_1:40133711-40133730 None:intergenic 30.0%
! TTAAGAATTGGTGATTAAGG+TGG - chr8_1:40133795-40133814 None:intergenic 30.0%
CAAACAATATAAGCACTTGT+TGG + chr8_1:40133867-40133886 Msa1193690:intron 30.0%
AATGTAAAATCACTCACTGT+AGG + chr8_1:40133928-40133947 Msa1193690:intron 30.0%
ATGTAAAATCACTCACTGTA+GGG + chr8_1:40133929-40133948 Msa1193690:intron 30.0%
CTACAAAACGTTTACCAAAT+AGG - chr8_1:40133955-40133974 None:intergenic 30.0%
! CTATTTGGTAAACGTTTTGT+AGG + chr8_1:40133953-40133972 Msa1193690:intron 30.0%
GTAAAAATGTGTGATGTGTA+AGG + chr8_1:40134014-40134033 Msa1193690:intron 30.0%
!! TTACTTTTGGGGGATTTTAA+GGG - chr8_1:40134048-40134067 None:intergenic 30.0%
!! TTTACTTTTGGGGGATTTTA+AGG - chr8_1:40134049-40134068 None:intergenic 30.0%
! TGGTTTGCAATAGGATATTA+TGG - chr8_1:40134139-40134158 None:intergenic 30.0%
! CTGTTTAAATGGTTTGCAAT+AGG - chr8_1:40134148-40134167 None:intergenic 30.0%
AGTAAGGAGGATAAATCAAA+TGG + chr8_1:40134260-40134279 Msa1193690:intron 30.0%
GTAAGGAGGATAAATCAAAT+GGG + chr8_1:40134261-40134280 Msa1193690:intron 30.0%
AAAGTCCAATAGTTACAGAT+AGG + chr8_1:40134286-40134305 Msa1193690:intron 30.0%
ACAGATAGGATATTATCTTG+AGG + chr8_1:40134300-40134319 Msa1193690:intron 30.0%
AAACAATGTCTAAGAGAGTT+AGG + chr8_1:40134334-40134353 Msa1193690:intron 30.0%
! GCATTGATACATATAAACGA+GGG - chr8_1:40134786-40134805 None:intergenic 30.0%
! TGCATTGATACATATAAACG+AGG - chr8_1:40134787-40134806 None:intergenic 30.0%
GTACTAGGTATTAATAGTTG+AGG + chr8_1:40134847-40134866 Msa1193690:intron 30.0%
GAACATGCTCTAGTAATTAT+AGG + chr8_1:40135032-40135051 Msa1193690:intron 30.0%
TACTAGCAGAATACAAAATG+TGG + chr8_1:40135128-40135147 Msa1193690:intron 30.0%
! GAATACAAAATGTGGTGTTA+TGG + chr8_1:40135136-40135155 Msa1193690:intron 30.0%
AAAAAGTGAATTGGACTACT+TGG + chr8_1:40135604-40135623 Msa1193690:intron 30.0%
GTTGTACTGCATAACTTAAT+AGG + chr8_1:40135667-40135686 Msa1193690:intron 30.0%
! GATTTTTCCCATAGTTATCT+TGG - chr8_1:40135707-40135726 None:intergenic 30.0%
!! TGCGAATTGTTGATTCATTA+GGG + chr8_1:40136049-40136068 Msa1193690:intron 30.0%
ATGAAATTCAGTATCCTCAT+AGG + chr8_1:40136082-40136101 Msa1193690:intron 30.0%
AATTCAGCAGCAAAGAATAT+GGG - chr8_1:40136317-40136336 None:intergenic 30.0%
AAATTCAGCAGCAAAGAATA+TGG - chr8_1:40136318-40136337 None:intergenic 30.0%
! GCAATTTAACTTAACATGGA+TGG - chr8_1:40136395-40136414 None:intergenic 30.0%
ACATGTTTAAAGGATCAATG+AGG + chr8_1:40136518-40136537 Msa1193690:CDS 30.0%
CAACTTCTACTGTGTTATAA+TGG + chr8_1:40136672-40136691 Msa1193690:three_prime_UTR 30.0%
ATAAAGCAAATCCATCAACT+AGG + chr8_1:40136697-40136716 Msa1193690:three_prime_UTR 30.0%
! AAATCTCTTTTCCTAGTTGA+TGG - chr8_1:40136711-40136730 None:intergenic 30.0%
ATCAACTAGGAAAAGAGATT+TGG + chr8_1:40136710-40136729 Msa1193690:three_prime_UTR 30.0%
CAACTGGAAGAAATAATTCT+TGG - chr8_1:40136747-40136766 None:intergenic 30.0%
GCACTGGAATATATTATATG+TGG + chr8_1:40136910-40136929 Msa1193690:three_prime_UTR 30.0%
CGCTTTAGTTGGTTATAATT+AGG - chr8_1:40136984-40137003 None:intergenic 30.0%
CAAGAAAATTACGCTTTAGT+TGG - chr8_1:40136995-40137014 None:intergenic 30.0%
TTCACTTCCAGTTTCATTTC+AGG + chr8_1:40131867-40131886 Msa1193690:CDS 35.0%
AATCTGACCTGAAATGAAAC+TGG - chr8_1:40131877-40131896 None:intergenic 35.0%
TGGAACGTTGTTGTGATATT+TGG + chr8_1:40132141-40132160 Msa1193690:intron 35.0%
! ATTTTGTAGTGATGCCTGTT+TGG + chr8_1:40132438-40132457 Msa1193690:intron 35.0%
CAGTTACTACTATTGGATGA+CGG - chr8_1:40132545-40132564 None:intergenic 35.0%
!! AGTTGATGGCAAACAAAGAA+AGG + chr8_1:40132926-40132945 Msa1193690:intron 35.0%
TTGAAAGCAGAATCATAGGA+AGG - chr8_1:40132963-40132982 None:intergenic 35.0%
AATTAGACAGTTTGAATGCC+TGG - chr8_1:40133100-40133119 None:intergenic 35.0%
ATGCAAAATACCACTGGAAA+GGG - chr8_1:40133520-40133539 None:intergenic 35.0%
AATGCAAAATACCACTGGAA+AGG - chr8_1:40133521-40133540 None:intergenic 35.0%
TAATGCAAGATTACCTCAAG+TGG + chr8_1:40133551-40133570 Msa1193690:intron 35.0%
TGATTCACTCATGCAAATTC+TGG + chr8_1:40133622-40133641 Msa1193690:intron 35.0%
GAATCAGGAACAAGTATAGA+TGG - chr8_1:40133696-40133715 None:intergenic 35.0%
ATTAAGAACATCCGCAATAG+TGG + chr8_1:40133727-40133746 Msa1193690:intron 35.0%
AACCAATGCTTAACAGGAAT+TGG - chr8_1:40133837-40133856 None:intergenic 35.0%
! TGGTAAACGTTTTGTAGGAT+TGG + chr8_1:40133958-40133977 Msa1193690:intron 35.0%
! GGTAAACGTTTTGTAGGATT+GGG + chr8_1:40133959-40133978 Msa1193690:intron 35.0%
ATCCCCCAAAAGTAAATATG+TGG + chr8_1:40134053-40134072 Msa1193690:intron 35.0%
TCCCCCAAAAGTAAATATGT+GGG + chr8_1:40134054-40134073 Msa1193690:intron 35.0%
!! TCCCCACATATTTACTTTTG+GGG - chr8_1:40134059-40134078 None:intergenic 35.0%
!! CTCCCCACATATTTACTTTT+GGG - chr8_1:40134060-40134079 None:intergenic 35.0%
GATATTATGGCATCACTCAT+GGG - chr8_1:40134126-40134145 None:intergenic 35.0%
CAATACAACAAGCACAAGTA+AGG + chr8_1:40134244-40134263 Msa1193690:intron 35.0%
!! TATTAGGAACTGGTTGGTAA+GGG - chr8_1:40134476-40134495 None:intergenic 35.0%
! TTATTAGGAACTGGTTGGTA+AGG - chr8_1:40134477-40134496 None:intergenic 35.0%
TTAATACAATTGGGCCTGTT+GGG - chr8_1:40134561-40134580 None:intergenic 35.0%
ATTAATACAATTGGGCCTGT+TGG - chr8_1:40134562-40134581 None:intergenic 35.0%
AACAGGCCCAATTGTATTAA+TGG + chr8_1:40134561-40134580 Msa1193690:intron 35.0%
ACAGGCCCAATTGTATTAAT+GGG + chr8_1:40134562-40134581 Msa1193690:intron 35.0%
! AATGGGCTTTATCCTAGAAT+AGG + chr8_1:40134579-40134598 Msa1193690:intron 35.0%
ATCAGGCAGAAATTTCCATT+TGG - chr8_1:40134681-40134700 None:intergenic 35.0%
! CATAGTAGGGAAACGTTTTA+TGG - chr8_1:40134828-40134847 None:intergenic 35.0%
TTAGACAGGAGGATAATACA+AGG - chr8_1:40134948-40134967 None:intergenic 35.0%
GTAAAATCTCAGCATTAGAC+AGG - chr8_1:40134962-40134981 None:intergenic 35.0%
AAATAGTGAGTGCTCTAGTA+TGG + chr8_1:40135234-40135253 Msa1193690:intron 35.0%
ACAGACTCCAAAAATCACAA+CGG + chr8_1:40135327-40135346 Msa1193690:intron 35.0%
ATTGGACCTGATCCATATTT+GGG + chr8_1:40135535-40135554 Msa1193690:intron 35.0%
TTCCATAAAAAAGACAGGAG+TGG - chr8_1:40136001-40136020 None:intergenic 35.0%
ATCAACAATTCGCAGCATTA+TGG - chr8_1:40136043-40136062 None:intergenic 35.0%
!! CTGCGAATTGTTGATTCATT+AGG + chr8_1:40136048-40136067 Msa1193690:intron 35.0%
GTTCATATTCAATAAGGGAC+AGG - chr8_1:40136615-40136634 None:intergenic 35.0%
! AATGTTGTGGAGTAACTTGT+TGG + chr8_1:40136640-40136659 Msa1193690:exon 35.0%
ATTTCTTCCAGTTGAATCAG+TGG + chr8_1:40136753-40136772 Msa1193690:three_prime_UTR 35.0%
!! ATTAGAACCACTGATTCAAC+TGG - chr8_1:40136763-40136782 None:intergenic 35.0%
AACTGGAAGTGAAACTGCAA+AGG - chr8_1:40131860-40131879 None:intergenic 40.0%
TTAGGTTAAGATTATGGCGG+AGG + chr8_1:40132177-40132196 Msa1193690:intron 40.0%
CAAGGTGGTGAATACTAAGA+TGG + chr8_1:40132279-40132298 Msa1193690:CDS 40.0%
! TACTAAGATGGTGATGCAGA+AGG + chr8_1:40132291-40132310 Msa1193690:CDS 40.0%
! ACTAAGATGGTGATGCAGAA+GGG + chr8_1:40132292-40132311 Msa1193690:CDS 40.0%
GATGCGAATTGCTGAAAGTT+TGG + chr8_1:40132342-40132361 Msa1193690:CDS 40.0%
CGAATTGCTGAAAGTTTGGT+GGG + chr8_1:40132346-40132365 Msa1193690:CDS 40.0%
GTAAAATCTAGATTTCCGGG+AGG + chr8_1:40132848-40132867 Msa1193690:intron 40.0%
ACTAGTAGAGGTTAGAAGAG+AGG - chr8_1:40133041-40133060 None:intergenic 40.0%
! TTGAATGCCTGGTTGTTGTT+AGG - chr8_1:40133089-40133108 None:intergenic 40.0%
ATGAGAACTCAAAGGTGACA+TGG - chr8_1:40133392-40133411 None:intergenic 40.0%
TATGTAAATGCCCTTTCCAG+TGG + chr8_1:40133507-40133526 Msa1193690:intron 40.0%
!!! GTTTTTTCTACGACCACTTG+AGG - chr8_1:40133567-40133586 None:intergenic 40.0%
CCAACTTAACACCACTATTG+CGG - chr8_1:40133741-40133760 None:intergenic 40.0%
TTAACAGGAATTGGCACCAA+TGG - chr8_1:40133828-40133847 None:intergenic 40.0%
TGCCAATTCCTGTTAAGCAT+TGG + chr8_1:40133832-40133851 Msa1193690:intron 40.0%
GCACAAAACCAATGCTTAAC+AGG - chr8_1:40133843-40133862 None:intergenic 40.0%
!! CCCCACATATTTACTTTTGG+GGG - chr8_1:40134058-40134077 None:intergenic 40.0%
CCCCCAAAAGTAAATATGTG+GGG + chr8_1:40134055-40134074 Msa1193690:intron 40.0%
! GCTCCCCACATATTTACTTT+TGG - chr8_1:40134061-40134080 None:intergenic 40.0%
AAGTAAATATGTGGGGAGCT+TGG + chr8_1:40134062-40134081 Msa1193690:intron 40.0%
CTCCAATACAACTACAACCA+TGG + chr8_1:40134094-40134113 Msa1193690:intron 40.0%
AGCCATGGTTGTAGTTGTAT+TGG - chr8_1:40134099-40134118 None:intergenic 40.0%
GGATATTATGGCATCACTCA+TGG - chr8_1:40134127-40134146 None:intergenic 40.0%
ACCAATCGAGTGAAACTCTT+AGG - chr8_1:40134188-40134207 None:intergenic 40.0%
TACAACAAGCACAAGTAAGG+AGG + chr8_1:40134247-40134266 Msa1193690:intron 40.0%
! TTTTATCACGCAATCTGCGT+TGG + chr8_1:40134366-40134385 Msa1193690:intron 40.0%
AAAACTGCCTACAGCAACTT+CGG - chr8_1:40134392-40134411 None:intergenic 40.0%
ATGCTTCTCATTGCTCCAAA+TGG + chr8_1:40134663-40134682 Msa1193690:intron 40.0%
! AGGGAAACGTTTTATGGCAT+GGG - chr8_1:40134822-40134841 None:intergenic 40.0%
! TAGGGAAACGTTTTATGGCA+TGG - chr8_1:40134823-40134842 None:intergenic 40.0%
ACGTTTCCCTACTATGTACT+AGG + chr8_1:40134832-40134851 Msa1193690:intron 40.0%
AAATCTCAGCATTAGACAGG+AGG - chr8_1:40134959-40134978 None:intergenic 40.0%
CTTATGCAGTTTGACAGAGA+CGG - chr8_1:40135432-40135451 None:intergenic 40.0%
CTGTTTGCCTAATGTATGAC+CGG + chr8_1:40135483-40135502 Msa1193690:intron 40.0%
CAAATATGGATCAGGTCCAA+TGG - chr8_1:40135536-40135555 None:intergenic 40.0%
CATTGGACCTGATCCATATT+TGG + chr8_1:40135534-40135553 Msa1193690:intron 40.0%
TTGGACCTGATCCATATTTG+GGG + chr8_1:40135536-40135555 Msa1193690:intron 40.0%
!! AATTTTGGGTGCCCCAAATA+TGG - chr8_1:40135550-40135569 None:intergenic 40.0%
ATAGGGCATGTCAAATGGTT+GGG - chr8_1:40135640-40135659 None:intergenic 40.0%
TGGGAAAAATCCTTCGAAAC+TGG + chr8_1:40135716-40135735 Msa1193690:intron 40.0%
GGGAAAAATCCTTCGAAACT+GGG + chr8_1:40135717-40135736 Msa1193690:intron 40.0%
ATGTTGAGTTTGTAGCCTTC+TGG + chr8_1:40135961-40135980 Msa1193690:intron 40.0%
GCAATTGATCATTGTCCAGA+AGG - chr8_1:40135979-40135998 None:intergenic 40.0%
!!! TGCCACTCCTGTCTTTTTTA+TGG + chr8_1:40135996-40136015 Msa1193690:intron 40.0%
GAAAAGAGATTTGGAAGCAG+TGG + chr8_1:40136719-40136738 Msa1193690:three_prime_UTR 40.0%
TTCCAGTGCATGAGATCTAA+AGG - chr8_1:40136899-40136918 None:intergenic 40.0%
TTTCTTGTGCTTTCTCAGTG+TGG + chr8_1:40137008-40137027 Msa1193690:three_prime_UTR 40.0%
!! GTGGTGTAAAAGTGTCTAAG+TGG + chr8_1:40137027-40137046 Msa1193690:three_prime_UTR 40.0%
AGGAAACTAGGAATCATTGG+AGG - chr8_1:40137086-40137105 None:intergenic 40.0%
GCGAATTGCTGAAAGTTTGG+TGG + chr8_1:40132345-40132364 Msa1193690:CDS 45.0%
TGGGGTTTAGTGGAGTGATT+TGG - chr8_1:40132576-40132595 None:intergenic 45.0%
TCCACTAAACCCCACTTTAG+TGG + chr8_1:40132582-40132601 Msa1193690:intron 45.0%
ACCACTAAAGTGGGGTTTAG+TGG - chr8_1:40132586-40132605 None:intergenic 45.0%
! ACCCCACTTTAGTGGTGTTA+TGG + chr8_1:40132590-40132609 Msa1193690:intron 45.0%
CCCATAACACCACTAAAGTG+GGG - chr8_1:40132594-40132613 None:intergenic 45.0%
!! CCCCACTTTAGTGGTGTTAT+GGG + chr8_1:40132591-40132610 Msa1193690:intron 45.0%
CCCCATAACACCACTAAAGT+GGG - chr8_1:40132595-40132614 None:intergenic 45.0%
!! CCCACTTTAGTGGTGTTATG+GGG + chr8_1:40132592-40132611 Msa1193690:intron 45.0%
TCCCCATAACACCACTAAAG+TGG - chr8_1:40132596-40132615 None:intergenic 45.0%
CAGTAAGCCTAACAACAACC+AGG + chr8_1:40133079-40133098 Msa1193690:intron 45.0%
GTGTGTGTGTGTGTGTGATA+AGG - chr8_1:40133146-40133165 None:intergenic 45.0%
! CCGCAATAGTGGTGTTAAGT+TGG + chr8_1:40133738-40133757 Msa1193690:intron 45.0%
AAATATGTGGGGAGCTTGGT+TGG + chr8_1:40134066-40134085 Msa1193690:intron 45.0%
GCCTAAGAGTTTCACTCGAT+TGG + chr8_1:40134184-40134203 Msa1193690:intron 45.0%
! ATTGGTAGTTTCACCCTAGC+AGG + chr8_1:40134202-40134221 Msa1193690:intron 45.0%
! TTGGTAGTTTCACCCTAGCA+GGG + chr8_1:40134203-40134222 Msa1193690:intron 45.0%
GTAACAGGAAACTGAGAGCT+TGG + chr8_1:40134445-40134464 Msa1193690:intron 45.0%
GCAATAGACCTCCTATTGTG+AGG - chr8_1:40134613-40134632 None:intergenic 45.0%
!! CATTGGTTCGATTGCACCTA+AGG - chr8_1:40135288-40135307 None:intergenic 45.0%
TGCTATGCAAGCACCAAAGT+CGG - chr8_1:40135379-40135398 None:intergenic 45.0%
CGGTCATACATTAGGCAAAC+AGG - chr8_1:40135485-40135504 None:intergenic 45.0%
ATTGCAGCCGGTCATACATT+AGG - chr8_1:40135493-40135512 None:intergenic 45.0%
AATGTATGACCGGCTGCAAT+CGG + chr8_1:40135493-40135512 Msa1193690:intron 45.0%
ATATGGATCAGGTCCAATGG+TGG - chr8_1:40135533-40135552 None:intergenic 45.0%
CATAGGGCATGTCAAATGGT+TGG - chr8_1:40135641-40135660 None:intergenic 45.0%
CAACCATTTGACATGCCCTA+TGG + chr8_1:40135639-40135658 Msa1193690:intron 45.0%
AGACCATAGGGCATGTCAAA+TGG - chr8_1:40135645-40135664 None:intergenic 45.0%
TTTGACATGCCCTATGGTCT+TGG + chr8_1:40135645-40135664 Msa1193690:intron 45.0%
GCAGTACAACCAAGACCATA+GGG - chr8_1:40135657-40135676 None:intergenic 45.0%
TGCAGTACAACCAAGACCAT+AGG - chr8_1:40135658-40135677 None:intergenic 45.0%
GAACACAAACCCAGTTTCGA+AGG - chr8_1:40135729-40135748 None:intergenic 45.0%
TAGTAGAGCCATCTTTCAGC+AGG - chr8_1:40136474-40136493 None:intergenic 45.0%
! CAGGATCTGTTACTTCGACA+CGG - chr8_1:40136564-40136583 None:intergenic 45.0%
!! TCCTGCTGATTTCACTGTCA+AGG + chr8_1:40136579-40136598 Msa1193690:CDS 45.0%
TCCTTGACAGTGAAATCAGC+AGG - chr8_1:40136583-40136602 None:intergenic 45.0%
GACCTTTAGATCTCATGCAC+TGG + chr8_1:40136894-40136913 Msa1193690:three_prime_UTR 45.0%
!! AAAAATAATTATTGAAAAAT+TGG - chr8_1:40136167-40136186 None:intergenic 5.0%
! ATTATGGCGGAGGCAAAACC+TGG + chr8_1:40132187-40132206 Msa1193690:CDS 50.0%
! AAGGTCGGCTTTCTCAATCC+AGG - chr8_1:40132208-40132227 None:intergenic 50.0%
GAGAAAGCCGACCTTCACTA+AGG + chr8_1:40132213-40132232 Msa1193690:CDS 50.0%
TGGTCGACCTTAGTGAAGGT+CGG - chr8_1:40132223-40132242 None:intergenic 50.0%
AAGCTGGTCGACCTTAGTGA+AGG - chr8_1:40132227-40132246 None:intergenic 50.0%
TCAGCAATTCGCATCTGACG+AGG - chr8_1:40132337-40132356 None:intergenic 50.0%
! AGTTTGGTGGGTGATGAGAC+TGG + chr8_1:40132358-40132377 Msa1193690:CDS 50.0%
! GTTTGGTGGGTGATGAGACT+GGG + chr8_1:40132359-40132378 Msa1193690:CDS 50.0%
!! AGTGGTGTTATGGGGAGAAG+TGG + chr8_1:40132600-40132619 Msa1193690:intron 50.0%
! TTTTACTCGGAGACGCAGCT+TGG + chr8_1:40133272-40133291 Msa1193690:intron 50.0%
GTCTGCTTTGGTGAGAGGAA+AGG - chr8_1:40133652-40133671 None:intergenic 50.0%
!! GAACATCAAAGGGCTAGCCT+TGG - chr8_1:40133674-40133693 None:intergenic 50.0%
CACTCACTGTAGGGCCTATT+TGG + chr8_1:40133938-40133957 Msa1193690:intron 50.0%
TCACTCATGGGAAAGAGCCA+TGG - chr8_1:40134114-40134133 None:intergenic 50.0%
ACACATGCTCAACCCTGCTA+GGG - chr8_1:40134218-40134237 None:intergenic 50.0%
CACACATTCTCTGTCCCAAC+AGG + chr8_1:40134544-40134563 Msa1193690:intron 50.0%
GAGGACTGAGGACCTATTCT+AGG - chr8_1:40134594-40134613 None:intergenic 50.0%
AGGTCCTCAGTCCTCACAAT+AGG + chr8_1:40134599-40134618 Msa1193690:intron 50.0%
TCCTCAGTCCTCACAATAGG+AGG + chr8_1:40134602-40134621 Msa1193690:intron 50.0%
ACCTCCTATTGTGAGGACTG+AGG - chr8_1:40134606-40134625 None:intergenic 50.0%
TCGATTGCACCTAAGGAGGT+CGG - chr8_1:40135281-40135300 None:intergenic 50.0%
TGGTTCGATTGCACCTAAGG+AGG - chr8_1:40135285-40135304 None:intergenic 50.0%
! CCAGCAGCCGTTGTGATTTT+TGG - chr8_1:40135337-40135356 None:intergenic 50.0%
CCAAAAATCACAACGGCTGC+TGG + chr8_1:40135334-40135353 Msa1193690:intron 50.0%
! ATCACAACGGCTGCTGGTTA+TGG + chr8_1:40135340-40135359 Msa1193690:intron 50.0%
TATGCAAGCACCAAAGTCGG+AGG - chr8_1:40135376-40135395 None:intergenic 50.0%
!! TTTGGTGCTTGCATAGCACC+TGG + chr8_1:40135381-40135400 Msa1193690:intron 50.0%
! TTGGTGCTTGCATAGCACCT+GGG + chr8_1:40135382-40135401 Msa1193690:intron 50.0%
TTGACAGAGACGGTAGGTTG+TGG - chr8_1:40135422-40135441 None:intergenic 50.0%
TGCAGTTTGACAGAGACGGT+AGG - chr8_1:40135428-40135447 None:intergenic 50.0%
GCATGTCAAATGGTTGGGAC+AGG - chr8_1:40135635-40135654 None:intergenic 50.0%
TCAGTCGACCTGCTGAAAGA+TGG + chr8_1:40136463-40136482 Msa1193690:intron 50.0%
!! AGGATCAATGAGGCTTGCTG+TGG + chr8_1:40136528-40136547 Msa1193690:CDS 50.0%
!! TGAGGCTTGCTGTGGACAAA+TGG + chr8_1:40136536-40136555 Msa1193690:CDS 50.0%
!! GAGGCTTGCTGTGGACAAAT+GGG + chr8_1:40136537-40136556 Msa1193690:CDS 50.0%
!! AGGCTTGCTGTGGACAAATG+GGG + chr8_1:40136538-40136557 Msa1193690:CDS 50.0%
TAAGGTCGACCAGCTTCGAC+CGG + chr8_1:40132231-40132250 Msa1193690:CDS 55.0%
TGGCCACACTCTGACTGTCA+AGG + chr8_1:40132261-40132280 Msa1193690:CDS 55.0%
CCACCTTGACAGTCAGAGTG+TGG - chr8_1:40132267-40132286 None:intergenic 55.0%
CCACACTCTGACTGTCAAGG+TGG + chr8_1:40132264-40132283 Msa1193690:CDS 55.0%
ATTCGCATCTGACGAGGCTG+AGG - chr8_1:40132331-40132350 None:intergenic 55.0%
CATCTGTCAGCTCTTCCTCC+CGG - chr8_1:40132866-40132885 None:intergenic 55.0%
CCTTGGTCTGCTTTGGTGAG+AGG - chr8_1:40133657-40133676 None:intergenic 55.0%
CCTCTCACCAAAGCAGACCA+AGG + chr8_1:40133654-40133673 Msa1193690:intron 55.0%
CACACATGCTCAACCCTGCT+AGG - chr8_1:40134219-40134238 None:intergenic 55.0%
CTAGCAGGGTTGAGCATGTG+TGG + chr8_1:40134217-40134236 Msa1193690:intron 55.0%
!! GGAACTGGTTGGTAAGGGAG+AGG - chr8_1:40134471-40134490 None:intergenic 55.0%
ATTGCACCTAAGGAGGTCGG+GGG - chr8_1:40135278-40135297 None:intergenic 55.0%
GATTGCACCTAAGGAGGTCG+GGG - chr8_1:40135279-40135298 None:intergenic 55.0%
CGATTGCACCTAAGGAGGTC+GGG - chr8_1:40135280-40135299 None:intergenic 55.0%
! ACAACGGCTGCTGGTTATGG+CGG + chr8_1:40135343-40135362 Msa1193690:intron 55.0%
TGGAATTCTGATCCGCACCC+AGG - chr8_1:40135402-40135421 None:intergenic 55.0%
!! CCGTTAGTACCGATTGCAGC+CGG - chr8_1:40135505-40135524 None:intergenic 55.0%
CCGGCTGCAATCGGTACTAA+CGG + chr8_1:40135502-40135521 Msa1193690:intron 55.0%
CGGCTGCAATCGGTACTAAC+GGG + chr8_1:40135503-40135522 Msa1193690:intron 55.0%
CTGCAATCGGTACTAACGGG+AGG + chr8_1:40135506-40135525 Msa1193690:intron 55.0%
ACTAACGGGAGGTCCACCAT+TGG + chr8_1:40135517-40135536 Msa1193690:intron 55.0%
GGGTGCCCCAAATATGGATC+AGG - chr8_1:40135544-40135563 None:intergenic 55.0%
AAGGTCGACCAGCTTCGACC+GGG + chr8_1:40132232-40132251 Msa1193690:CDS 60.0%
AGAGTGTGGCCACTAGTCCC+CGG - chr8_1:40132253-40132272 None:intergenic 60.0%
ATGCAGAAGGGTCGTCCCGA+TGG + chr8_1:40132304-40132323 Msa1193690:CDS 60.0%
TGACGAGGCTGAGGACCATC+GGG - chr8_1:40132322-40132341 None:intergenic 60.0%
CTGACGAGGCTGAGGACCAT+CGG - chr8_1:40132323-40132342 None:intergenic 60.0%
!! GGGCTAGCCTTGGTCTGCTT+TGG - chr8_1:40133664-40133683 None:intergenic 60.0%
! GCGTTGGCCGAAGTTGCTGT+AGG + chr8_1:40134382-40134401 Msa1193690:intron 60.0%
AGGAGGTCGGGGGTTTGGAT+AGG - chr8_1:40135268-40135287 None:intergenic 60.0%
TCCAAACCCCCGACCTCCTT+AGG + chr8_1:40135269-40135288 Msa1193690:intron 60.0%
ACCTAAGGAGGTCGGGGGTT+TGG - chr8_1:40135273-40135292 None:intergenic 60.0%
! CAACGGCTGCTGGTTATGGC+GGG + chr8_1:40135344-40135363 Msa1193690:intron 60.0%
GCTTGCATAGCACCTGGGTG+CGG + chr8_1:40135387-40135406 Msa1193690:intron 60.0%
AGGTCGACCAGCTTCGACCG+GGG + chr8_1:40132233-40132252 Msa1193690:CDS 65.0%
CACTAGTCCCCGGTCGAAGC+TGG - chr8_1:40132243-40132262 None:intergenic 65.0%
CAGCTTCGACCGGGGACTAG+TGG + chr8_1:40132241-40132260 Msa1193690:CDS 65.0%
CGGGCGCACACCTCCGACTT+TGG + chr8_1:40135363-40135382 Msa1193690:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 40131820 40137107 40131820 ID=Msa1193690;Name=Msa1193690
chr8_1 mRNA 40131820 40137107 40131820 ID=Msa1193690-mRNA-1;Parent=Msa1193690;Name=Msa1193690-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|1|1|0.5|0.33|3|453|162
chr8_1 exon 40131820 40131888 40131820 ID=Msa1193690-mRNA-1:exon:13086;Parent=Msa1193690-mRNA-1
chr8_1 exon 40132181 40132412 40132181 ID=Msa1193690-mRNA-1:exon:13087;Parent=Msa1193690-mRNA-1
chr8_1 exon 40136467 40137107 40136467 ID=Msa1193690-mRNA-1:exon:13088;Parent=Msa1193690-mRNA-1
chr8_1 CDS 40131820 40131888 40131820 ID=Msa1193690-mRNA-1:cds;Parent=Msa1193690-mRNA-1
chr8_1 CDS 40132181 40132412 40132181 ID=Msa1193690-mRNA-1:cds;Parent=Msa1193690-mRNA-1
chr8_1 CDS 40136467 40136654 40136467 ID=Msa1193690-mRNA-1:cds;Parent=Msa1193690-mRNA-1
chr8_1 three_prime_UTR 40136655 40137107 40136655 ID=Msa1193690-mRNA-1:three_prime_utr;Parent=Msa1193690-mRNA-1
Gene Sequence

>Msa1193690

GGCTACGTTTCACTTTTCATTTTCAGATCTCTTTTTGCCTTTGCAGTTTCACTTCCAGTTTCATTTCAGGTTAAGATTATGGCGGAGGCAAAACCTGGATTGAGAAAGCCGACCTTCACTAAGGTCGACCAGCTTCGACCGGGGACTAGTGGCCACACTCTGACTGTCAAGGTGGTGAATACTAAGATGGTGATGCAGAAGGGTCGTCCCGATGGTCCTCAGCCTCGTCAGATGCGAATTGCTGAAAGTTTGGTGGGTGATGAGACTGGGATGATCATCTTTACTGCAAGAAATGATCAAGTCGACCTGCTGAAAGATGGCTCTACTATCATTCTGCGAAATGCAAAAATTGACATGTTTAAAGGATCAATGAGGCTTGCTGTGGACAAATGGGGCCGTGTCGAAGTAACAGATCCTGCTGATTTCACTGTCAAGGAAGACAACAACCTGTCCCTTATTGAATATGAACTTGTTAATGTTGTGGAGTAA
Protein sequence

>Msa1193690

GYVSLFIFRSLFAFAVSLPVSFQVKIMAEAKPGLRKPTFTKVDQLRPGTSGHTLTVKVVNTKMVMQKGRPDGPQPRQMRIAESLVGDETGMIIFTARNDQVDLLKDGSTIILRNAKIDMFKGSMRLAVDKWGRVEVTDPADFTVKEDNNLSLIEYELVNVVE*