AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1263980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263980 MtrunA17_Chr4g0074521 91.170 487 30 5 1 482 1 479 0.0 867
Msa1263980 MtrunA17_Chr0c30g0494091 90.000 400 28 4 1 395 1 393 0.0 692
Msa1263980 MtrunA17_Chr2g0309551 26.305 498 278 12 32 473 61 525 1.44e-35 139
Msa1263980 MtrunA17_Chr3g0121351 31.514 403 214 15 71 444 128 497 1.86e-34 136
Msa1263980 MtrunA17_Chr2g0330401 28.158 380 228 10 76 444 88 433 1.73e-31 126
Msa1263980 MtrunA17_Chr1g0176041 30.311 386 220 13 79 444 149 505 1.57e-30 125
Msa1263980 MtrunA17_Chr4g0063551 29.177 401 218 15 74 444 130 494 7.78e-30 123
Msa1263980 MtrunA17_Chr7g0236841 28.649 370 231 11 90 456 16 355 1.26e-28 117
Msa1263980 MtrunA17_Chr6g0483491 28.378 370 232 11 90 456 16 355 2.27e-28 117
Msa1263980 MtrunA17_Chr6g0466611 26.420 405 242 14 92 474 150 520 5.67e-28 117
Msa1263980 MtrunA17_Chr2g0293631 29.155 367 210 8 91 444 503 832 6.49e-28 118
Msa1263980 MtrunA17_Chr2g0299681 26.854 391 239 12 92 473 49 401 8.12e-28 115
Msa1263980 MtrunA17_Chr7g0263771 27.763 371 213 14 87 444 136 464 1.38e-27 116
Msa1263980 MtrunA17_Chr6g0449911 28.000 425 242 12 74 474 155 539 1.66e-27 116
Msa1263980 MtrunA17_Chr3g0107851 29.888 358 204 12 103 444 136 462 5.16e-27 114
Msa1263980 MtrunA17_Chr1g0157691 27.021 433 244 15 79 481 142 532 1.56e-26 113
Msa1263980 MtrunA17_Chr0c30g0494081 88.235 51 6 0 397 447 13 63 1.72e-26 102
Msa1263980 MtrunA17_Chr1g0200181 27.763 389 218 13 79 444 140 488 2.79e-26 112
Msa1263980 MtrunA17_Chr2g0329931 25.743 404 241 14 92 482 49 406 6.76e-26 109
Msa1263980 MtrunA17_Chr5g0409981 28.497 386 215 15 80 444 100 445 7.52e-26 110
Msa1263980 MtrunA17_Chr4g0029191 27.316 421 216 14 92 444 56 454 1.23e-25 110
Msa1263980 MtrunA17_Chr4g0070981 26.870 361 223 10 90 444 47 372 1.64e-25 108
Msa1263980 MtrunA17_Chr7g0247191 25.783 415 262 12 63 473 133 505 1.82e-25 109
Msa1263980 MtrunA17_Chr4g0040761 28.125 352 210 12 102 444 37 354 2.47e-25 109
Msa1263980 MtrunA17_Chr4g0062301 27.273 352 222 8 100 444 113 437 2.87e-25 109
Msa1263980 MtrunA17_Chr4g0076491 26.406 409 236 13 79 457 282 655 3.87e-25 109
Msa1263980 MtrunA17_Chr2g0297261 25.815 368 224 12 87 444 37 365 4.79e-25 107
Msa1263980 MtrunA17_Chr6g0449741 26.225 408 236 13 79 457 244 615 1.22e-24 107
Msa1263980 MtrunA17_Chr8g0342861 26.944 360 220 10 92 444 49 372 1.37e-24 105
Msa1263980 MtrunA17_Chr8g0347151 28.150 373 214 14 95 445 212 552 2.01e-24 107
Msa1263980 MtrunA17_Chr2g0301281 27.078 421 217 14 92 444 53 451 3.49e-24 105
Msa1263980 MtrunA17_Chr2g0277821 26.392 413 235 13 76 465 496 862 1.23e-23 105
Msa1263980 MtrunA17_Chr4g0003441 23.543 429 276 9 64 480 88 476 1.42e-23 103
Msa1263980 MtrunA17_Chr2g0307471 27.401 354 226 10 96 444 103 430 2.05e-23 103
Msa1263980 MtrunA17_Chr7g0247221 25.490 408 258 12 70 473 133 498 2.47e-23 102
Msa1263980 MtrunA17_Chr7g0247181 25.490 408 258 12 70 473 130 495 2.69e-23 102
Msa1263980 MtrunA17_Chr7g0270131 28.021 389 235 14 93 473 241 592 3.83e-23 103
Msa1263980 MtrunA17_Chr4g0058591 28.280 343 211 9 79 415 197 510 6.57e-23 101
Msa1263980 MtrunA17_Chr7g0236831 25.694 432 230 13 93 457 172 579 1.54e-22 101
Msa1263980 MtrunA17_Chr6g0461751 26.829 369 223 13 89 444 145 479 2.94e-22 99.8
Msa1263980 MtrunA17_Chr3g0098121 28.455 369 219 14 87 444 155 489 6.35e-22 99.4
Msa1263980 MtrunA17_Chr2g0300291 28.455 369 220 13 87 444 144 479 7.17e-22 99.4
Msa1263980 MtrunA17_Chr8g0347161 26.810 373 219 15 95 445 113 453 2.74e-21 97.1
Msa1263980 MtrunA17_Chr5g0443991 25.341 367 236 11 103 461 95 431 3.44e-21 97.1
Msa1263980 MtrunA17_Chr2g0310581 28.169 355 213 12 99 444 68 389 5.49e-21 95.9
Msa1263980 MtrunA17_Chr3g0095031 25.532 423 268 10 39 444 34 426 1.39e-20 94.7
Msa1263980 MtrunA17_Chr5g0442191 26.146 371 230 9 84 444 81 417 1.60e-20 94.7
Msa1263980 MtrunA17_Chr8g0386451 25.543 368 216 14 102 445 306 639 4.37e-20 93.6
Msa1263980 MtrunA17_Chr8g0347171 25.876 371 223 13 95 444 171 510 6.88e-20 92.8
Msa1263980 MtrunA17_Chr3g0114081 24.725 364 245 6 94 444 26 373 1.62e-19 91.7
Msa1263980 MtrunA17_Chr7g0271121 26.301 365 227 8 90 444 112 444 4.61e-19 90.5
Msa1263980 MtrunA17_Chr4g0034411 25.575 348 226 11 103 444 95 415 5.84e-19 90.1
Msa1263980 MtrunA17_Chr3g0145781 24.479 384 231 11 92 444 140 495 1.70e-18 88.2
Msa1263980 MtrunA17_Chr6g0475251 24.439 401 255 12 85 472 104 469 7.09e-18 86.7
Msa1263980 MtrunA17_Chr1g0192021 23.284 408 238 11 94 456 41 418 1.04e-17 85.9
Msa1263980 MtrunA17_Chr1g0149251 25.269 372 216 13 122 474 2 330 2.28e-17 83.2
Msa1263980 MtrunA17_Chr1g0179761 27.073 410 230 19 67 444 66 438 1.16e-16 82.4
Msa1263980 MtrunA17_Chr1g0204391 24.745 392 229 12 85 444 45 402 2.37e-16 81.6
Msa1263980 MtrunA17_Chr8g0364251 27.322 183 116 6 268 444 356 527 2.36e-12 69.3
Msa1263980 MtrunA17_Chr4g0039471 29.167 192 117 5 92 278 231 408 2.81e-11 65.5
Msa1263980 MtrunA17_Chr8g0349951 32.432 148 89 4 94 239 20 158 3.72e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1263980 AT5G19210.2 61.538 481 175 2 1 481 1 471 0.0 611
Msa1263980 AT5G19210.1 69.401 317 94 1 165 481 1 314 4.98e-168 476
Msa1263980 AT5G19210.3 69.401 317 94 1 165 481 1 314 4.98e-168 476
Msa1263980 AT1G12770.2 26.829 451 245 13 90 481 117 541 3.27e-35 138
Msa1263980 AT1G12770.1 26.829 451 245 13 90 481 117 541 3.27e-35 138
Msa1263980 AT5G63120.2 29.178 377 228 12 76 444 158 503 1.48e-32 131
Msa1263980 AT3G58510.1 30.500 400 219 12 71 444 135 501 6.80e-31 126
Msa1263980 AT3G58510.3 30.500 400 219 12 71 444 135 501 6.80e-31 126
Msa1263980 AT3G58510.2 30.500 400 219 12 71 444 135 501 6.80e-31 126
Msa1263980 AT3G58570.1 30.370 405 225 12 79 455 142 517 1.28e-30 125
Msa1263980 AT2G42520.2 31.967 366 192 12 103 444 179 511 9.25e-30 123
Msa1263980 AT2G42520.1 31.967 366 192 12 103 444 179 511 9.25e-30 123
Msa1263980 AT2G42520.3 31.967 366 192 12 103 444 179 511 9.25e-30 123
Msa1263980 AT1G55150.1 27.660 376 235 10 76 444 92 437 1.31e-28 119
Msa1263980 AT1G20920.2 29.798 396 227 14 76 457 184 542 1.50e-28 120
Msa1263980 AT5G60990.1 28.792 389 232 13 82 456 8 365 2.04e-28 117
Msa1263980 AT1G55150.2 27.660 376 235 10 76 444 117 462 2.05e-28 118
Msa1263980 AT3G01540.4 28.442 443 245 13 27 444 100 495 5.49e-28 117
Msa1263980 AT3G01540.2 28.442 443 245 13 27 444 100 495 5.49e-28 117
Msa1263980 AT3G01540.3 28.442 443 245 13 27 444 100 495 5.49e-28 117
Msa1263980 AT3G01540.1 28.442 443 245 13 27 444 100 495 5.68e-28 117
Msa1263980 AT1G20920.4 29.208 404 235 14 76 465 522 888 7.79e-28 118
Msa1263980 AT1G20920.6 29.208 404 235 14 76 465 522 888 7.79e-28 118
Msa1263980 AT1G20920.3 29.208 404 235 14 76 465 522 888 7.79e-28 118
Msa1263980 AT1G20920.7 29.208 404 235 14 76 465 522 888 7.79e-28 118
Msa1263980 AT1G20920.5 29.208 404 235 14 76 465 522 888 7.79e-28 118
Msa1263980 AT1G20920.1 29.208 404 235 14 76 465 522 888 7.79e-28 118
Msa1263980 AT1G72730.1 27.431 401 239 15 91 482 50 407 1.29e-27 114
Msa1263980 AT5G65900.1 28.969 359 221 10 92 444 163 493 2.14e-27 116
Msa1263980 AT4G00660.1 26.683 416 253 12 67 473 115 487 3.34e-27 114
Msa1263980 AT4G00660.2 26.683 416 253 12 67 473 115 487 3.34e-27 114
Msa1263980 AT3G61240.2 25.214 468 296 14 21 482 67 486 1.06e-26 113
Msa1263980 AT3G61240.1 25.214 468 296 14 21 482 67 486 1.06e-26 113
Msa1263980 AT1G77030.1 27.684 354 217 11 98 444 43 364 1.13e-26 114
Msa1263980 AT4G33370.1 28.382 377 231 13 79 444 93 441 3.27e-26 112
Msa1263980 AT3G09720.2 25.549 364 230 11 87 444 145 473 4.30e-26 111
Msa1263980 AT3G09720.1 25.549 364 230 11 87 444 145 473 4.30e-26 111
Msa1263980 AT3G13920.3 26.065 399 246 13 92 482 38 395 4.44e-26 110
Msa1263980 AT3G13920.1 26.065 399 246 13 92 482 48 405 5.95e-26 110
Msa1263980 AT1G54270.1 25.815 399 247 13 92 482 48 405 1.08e-25 109
Msa1263980 AT3G13920.4 26.221 389 238 13 102 482 53 400 1.26e-25 108
Msa1263980 AT5G51280.1 27.005 374 240 10 79 444 142 490 1.65e-25 110
Msa1263980 AT5G14610.2 28.796 382 216 13 79 444 157 498 1.95e-25 110
Msa1263980 AT5G14610.6 28.796 382 216 13 79 444 157 498 2.13e-25 110
Msa1263980 AT5G14610.5 28.267 375 227 11 79 444 165 506 2.17e-25 110
Msa1263980 AT1G54270.2 26.598 391 234 13 102 482 53 400 2.20e-25 108
Msa1263980 AT3G06480.1 28.065 367 216 10 90 444 442 772 2.26e-25 110
Msa1263980 AT4G09730.1 26.617 402 245 14 92 474 121 491 4.28e-25 109
Msa1263980 AT3G13920.5 25.849 383 241 11 92 468 52 397 4.29e-25 107
Msa1263980 AT3G13920.2 25.849 383 241 11 92 468 48 393 4.64e-25 107
Msa1263980 AT3G19760.1 25.753 365 222 12 90 444 42 367 4.72e-25 107
Msa1263980 AT5G63630.1 27.224 371 220 13 95 445 66 406 9.05e-25 107
Msa1263980 AT2G40700.1 27.765 425 211 16 92 444 43 443 1.32e-24 107
Msa1263980 AT1G16280.1 27.511 458 269 16 27 473 16 421 1.36e-24 107
Msa1263980 AT5G63630.2 27.224 371 220 13 95 445 260 600 3.32e-24 106
Msa1263980 AT3G18600.1 26.966 356 219 10 98 444 104 427 3.95e-24 105
Msa1263980 AT2G33730.1 27.543 403 225 12 79 450 309 675 5.48e-24 106
Msa1263980 AT5G11170.1 25.127 394 255 11 93 480 56 415 7.63e-24 103
Msa1263980 AT5G11200.1 25.127 394 255 11 93 480 56 415 7.63e-24 103
Msa1263980 AT2G45810.1 25.598 418 260 13 70 482 145 516 8.24e-24 104
Msa1263980 AT1G51380.1 26.667 360 221 10 92 444 31 354 1.73e-23 102
Msa1263980 AT5G14610.7 28.933 356 205 11 101 444 48 367 3.65e-23 102
Msa1263980 AT5G14610.3 28.933 356 205 11 101 444 48 367 3.65e-23 102
Msa1263980 AT5G63120.3 27.874 348 212 12 76 415 158 474 8.81e-23 101
Msa1263980 AT5G63120.4 27.874 348 212 12 76 415 158 474 8.81e-23 101
Msa1263980 AT5G63120.5 27.874 348 212 12 76 415 158 474 8.81e-23 101
Msa1263980 AT5G14610.1 28.571 350 214 10 101 444 247 566 8.83e-23 102
Msa1263980 AT5G63120.1 27.874 348 212 12 76 415 158 474 9.69e-23 101
Msa1263980 AT5G11200.3 25.874 429 249 16 93 480 56 456 4.74e-22 99.0
Msa1263980 AT2G47330.1 26.992 389 239 15 93 473 238 589 9.34e-22 99.4
Msa1263980 AT1G31970.1 27.559 381 226 13 80 444 113 459 1.04e-21 98.6
Msa1263980 AT5G11200.2 25.517 435 253 15 93 474 56 472 2.80e-21 97.1
Msa1263980 AT5G05450.1 23.760 383 222 10 94 444 27 371 4.92e-21 96.7
Msa1263980 AT1G71370.1 25.337 371 226 11 92 444 25 362 5.07e-21 96.7
Msa1263980 AT3G09620.1 28.030 396 205 16 76 457 389 718 5.59e-21 97.1
Msa1263980 AT3G02065.3 26.902 368 223 12 90 444 117 451 5.88e-21 96.3
Msa1263980 AT3G02065.2 26.902 368 223 12 90 444 117 451 5.88e-21 96.3
Msa1263980 AT3G09620.2 28.030 396 205 16 76 457 390 719 6.12e-21 97.1
Msa1263980 AT5G08620.1 27.005 374 217 14 95 445 92 432 7.73e-21 95.9
Msa1263980 AT5G54910.1 25.635 394 240 10 67 444 55 411 1.06e-20 95.9
Msa1263980 AT5G08610.1 26.954 371 221 13 95 445 394 734 7.82e-20 93.6
Msa1263980 AT3G16840.1 23.898 431 236 14 94 457 201 606 1.13e-19 92.8
Msa1263980 AT4G16630.1 29.396 364 208 14 94 444 178 505 1.13e-19 92.8
Msa1263980 AT3G16840.2 23.898 431 236 14 94 457 202 607 1.29e-19 92.8
Msa1263980 AT5G26742.1 26.216 370 233 9 85 444 104 443 1.79e-19 92.0
Msa1263980 AT5G26742.2 26.216 370 233 9 85 444 104 443 1.79e-19 92.0
Msa1263980 AT2G07750.1 24.279 416 243 15 95 482 387 758 5.01e-19 90.9
Msa1263980 AT1G63250.1 24.279 416 243 15 95 482 340 711 1.23e-18 89.7
Msa1263980 AT5G11170.2 25.344 363 227 13 122 474 2 330 1.26e-18 87.4
Msa1263980 AT5G14610.4 27.019 359 214 11 79 425 165 487 1.43e-18 89.0
Msa1263980 AT3G22330.1 26.836 354 201 10 108 444 129 441 2.12e-18 88.6
Msa1263980 AT3G06980.1 24.365 394 256 12 73 444 364 737 5.38e-18 87.8
Msa1263980 AT3G22310.2 26.531 343 216 7 108 444 141 453 5.96e-18 87.0
Msa1263980 AT3G22310.1 26.531 343 216 7 108 444 141 453 6.12e-18 87.0
Msa1263980 AT3G06480.2 27.059 340 200 10 90 417 442 745 7.87e-18 87.0
Msa1263980 AT5G62190.1 26.031 388 233 13 85 454 98 449 1.12e-16 83.6
Msa1263980 AT5G26742.3 26.866 335 205 9 120 444 46 350 8.54e-16 80.5
Msa1263980 AT1G28180.1 26.289 388 223 12 113 482 3 345 9.43e-16 79.3
Msa1263980 AT1G71280.2 26.012 346 177 15 92 419 26 310 2.11e-15 77.8
Msa1263980 AT1G71280.1 26.000 350 180 15 92 423 26 314 3.53e-15 78.2
Msa1263980 AT4G34910.1 25.185 405 219 15 93 444 56 429 5.26e-15 78.2
Msa1263980 AT3G02065.1 25.648 347 210 12 112 444 2 314 4.52e-14 73.9
Msa1263980 AT3G53110.1 26.776 366 213 16 100 444 109 440 2.58e-13 72.4
Msa1263980 AT1G51380.2 26.172 256 167 7 92 344 31 267 1.38e-12 68.6
Msa1263980 AT1G51380.4 26.699 206 130 6 92 290 31 222 8.45e-12 66.6
Msa1263980 AT1G51380.3 26.341 205 132 6 92 290 31 222 1.23e-11 66.2

Find 114 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTATATGTGAGTCATTTC+TGG 0.194191 8_2:+67377781 None:intergenic
GATGAGGCAAAGCTTGTTTC+TGG 0.205005 8_2:+67382429 None:intergenic
GAAATTGCCTTTGGAGTAAT+TGG 0.245034 8_2:+67382595 None:intergenic
TTTCTTATCTAGACAGGTTC+TGG 0.245869 8_2:-67381551 Msa1263980:intron
AAGGCACAAGAGTTGGTTTA+AGG 0.253619 8_2:-67381201 Msa1263980:intron
CAGATCAAAGAAATAAAATA+AGG 0.258834 8_2:+67377503 None:intergenic
GTTAACGCTCTCAATTTATA+TGG 0.262256 8_2:-67377454 Msa1263980:three_prime_UTR
AAAGTTGTCTTTCAAGCATT+TGG 0.274712 8_2:+67380392 None:intergenic
CGAATTGTATCAAGGATAAC+AGG 0.291553 8_2:+67379293 None:intergenic
GAAGGTCTAGGTGAGGTTTA+TGG 0.299819 8_2:+67377589 None:intergenic
CCACCGGACTAACGTGAATA+TGG 0.305745 8_2:+67379592 None:intergenic
TTTCTTCAATTCAGGAGGTT+AGG 0.380425 8_2:-67377861 Msa1263980:intron
AGTATCAGATACAGTATAGA+TGG 0.387571 8_2:-67382889 Msa1263980:exon
GCAGTCTGAGAAGTCGAAAA+AGG 0.395260 8_2:-67378568 Msa1263980:intron
ACGAAGCTGTGCAGCAGAAA+TGG 0.398801 8_2:-67379733 Msa1263980:CDS
TGCTCGATGAAGATAATCTA+TGG 0.405528 8_2:+67377738 None:intergenic
ACTGTTGCAACTACTATTGC+TGG 0.408826 8_2:+67380427 None:intergenic
TGAATTTGAAGATTGATAGT+AGG 0.408867 8_2:-67382922 Msa1263980:five_prime_UTR
AACAAATATAATGCCGGACT+TGG 0.412449 8_2:+67379264 None:intergenic
TGCTCCCCTTCAACTCCTGT+TGG 0.415557 8_2:+67381269 None:intergenic
ACCATCATGGCTCTGTTAGA+TGG 0.426508 8_2:-67381236 Msa1263980:CDS
AGTACAATTCACATCAGAAA+AGG 0.436765 8_2:+67377696 None:intergenic
TTTCAGATAAATACAATTTG+AGG 0.437886 8_2:+67377531 None:intergenic
AATATGAGGTCAAAATCTTC+CGG 0.442699 8_2:+67379822 None:intergenic
TACCAAGGTTGCTAGGATAC+TGG 0.446818 8_2:-67381300 Msa1263980:CDS
GCAAAGCCAACAGGAGTTGA+AGG 0.454965 8_2:-67381275 Msa1263980:CDS
CATTATATTTGTTAGTGAGC+AGG 0.457713 8_2:-67379254 Msa1263980:intron
TTGAAGATTGATAGTAGGAA+AGG 0.465479 8_2:-67382917 Msa1263980:five_prime_UTR
ATACTGGCGGCAAAGCCAAC+AGG 0.471835 8_2:-67381284 Msa1263980:CDS
ACTGTATCATCTTCGGTAGT+AGG 0.472224 8_2:+67382669 None:intergenic
CAATTCGATGCTCCCAAGTC+CGG 0.474340 8_2:-67379277 Msa1263980:CDS
CATTGAGAAGGCACAAGAGT+TGG 0.474974 8_2:-67381208 Msa1263980:CDS
TGTTCGAACTGTATCATCTT+CGG 0.481379 8_2:+67382662 None:intergenic
TTACTTGCATGCCAAGTTCA+CGG 0.485189 8_2:+67381444 None:intergenic
TTCTTATCTAGACAGGTTCT+GGG 0.487069 8_2:-67381550 Msa1263980:intron
GGTTTCAGGATGGAAGAGGT+TGG 0.487259 8_2:-67382473 Msa1263980:intron
TTGGTGCCCACCCGTGAACT+TGG 0.487776 8_2:-67381455 Msa1263980:CDS
TACTTGCATGCCAAGTTCAC+GGG 0.491088 8_2:+67381445 None:intergenic
GCTTGGAACCTTGCGGGTGT+TGG 0.493949 8_2:-67380365 Msa1263980:CDS
AGATCAAAGAAATAAAATAA+GGG 0.499268 8_2:+67377504 None:intergenic
GTACAATTCACATCAGAAAA+GGG 0.505001 8_2:+67377697 None:intergenic
ATAGATTATCTTCATCGAGC+AGG 0.505786 8_2:-67377736 Msa1263980:CDS
AGTAAAATATGTGAAGGTCT+AGG 0.506605 8_2:+67377577 None:intergenic
TGCCTTTGGAGTAATTGGTC+GGG 0.507382 8_2:+67382600 None:intergenic
GCTTGTTTCTGGACCGGTGT+AGG 0.508652 8_2:+67382440 None:intergenic
GGCAAAGCTTGTTTCTGGAC+CGG 0.513600 8_2:+67382434 None:intergenic
TCCATCTAACAGAGCCATGA+TGG 0.515808 8_2:+67381235 None:intergenic
GATCCATATTCACGTTAGTC+CGG 0.519341 8_2:-67379595 Msa1263980:CDS
CACCAGCATTATAGTCTCGC+AGG 0.522768 8_2:-67377671 Msa1263980:CDS
TCATGTCATCTTCGAGGAGG+AGG 0.523824 8_2:+67378475 None:intergenic
ATCAGAAAAGGGTTTCCTAC+AGG 0.525591 8_2:+67377708 None:intergenic
GTTAATGTTAGCGGAGAAAG+AGG 0.525941 8_2:+67382746 None:intergenic
CGAGACGGCATGGGCTCCAC+CGG 0.526533 8_2:+67379576 None:intergenic
CTCACTAACAAATATAATGC+CGG 0.529522 8_2:+67379258 None:intergenic
ATGAGATAGACGAGACGGCA+TGG 0.531411 8_2:+67379566 None:intergenic
TTGCCTTTGGAGTAATTGGT+CGG 0.541519 8_2:+67382599 None:intergenic
TGAAATTCATGTCATCTTCG+AGG 0.542019 8_2:+67378469 None:intergenic
CGCCAGTATCCTAGCAACCT+TGG 0.544294 8_2:+67381298 None:intergenic
CAAAGCAAGTGAGTTCTCTC+CGG 0.545982 8_2:-67379841 Msa1263980:CDS
TTCACGAGCAGCTTCTCTGT+TGG 0.548108 8_2:-67378445 Msa1263980:intron
TCTTCGGTAGTAGGAGAAGT+AGG 0.549137 8_2:+67382678 None:intergenic
ATATGGTTTCAGGATGGAAG+AGG 0.550760 8_2:-67382477 Msa1263980:intron
ACAAATATAATGCCGGACTT+GGG 0.554160 8_2:+67379265 None:intergenic
ACAAGGTTACCAAGGTTGCT+AGG 0.555693 8_2:-67381307 Msa1263980:intron
GTAGGATTCGCAATGGCTAG+TGG 0.557789 8_2:+67382696 None:intergenic
CTCCTGCGAGACTATAATGC+TGG 0.560387 8_2:+67377669 None:intergenic
TGACTGCATACTTCAAGCTC+AGG 0.563031 8_2:-67382393 Msa1263980:intron
AAAGTCAATCACAAGGGACG+TGG 0.566234 8_2:+67378530 None:intergenic
GCGGGTGTTGGTTGTTGATG+AGG 0.566555 8_2:-67380353 Msa1263980:intron
TGAGATAGACGAGACGGCAT+GGG 0.566865 8_2:+67379567 None:intergenic
ATTCAGGAGGTTAGGAAAGG+TGG 0.567056 8_2:-67377853 Msa1263980:intron
GATGAAGAAAGAAAACGAAG+AGG 0.568181 8_2:+67382831 None:intergenic
TCAATTCAGGAGGTTAGGAA+AGG 0.571959 8_2:-67377856 Msa1263980:intron
GGGAGCATCGAATTGTATCA+AGG 0.575141 8_2:+67379285 None:intergenic
GTGCTGTGGTATAGATGCAC+TGG 0.576066 8_2:+67379769 None:intergenic
TAGATTATCTTCATCGAGCA+GGG 0.578270 8_2:-67377735 Msa1263980:CDS
TTGCATGCCAAGTTCACGGG+TGG 0.578362 8_2:+67381448 None:intergenic
CAAAGCCAACAGGAGTTGAA+GGG 0.578993 8_2:-67381274 Msa1263980:CDS
TGTGCAGCAGAAATGGACTA+AGG 0.582058 8_2:-67379726 Msa1263980:intron
GCAAAGATCATGTACCATCA+TGG 0.597463 8_2:-67381249 Msa1263980:CDS
GCATTATAGTCTCGCAGGAG+CGG 0.601083 8_2:-67377666 Msa1263980:CDS
ACGGTGATGGTTAATGTTAG+CGG 0.601515 8_2:+67382737 None:intergenic
TCAATCACAAGGGACGTGGA+TGG 0.602588 8_2:+67378534 None:intergenic
CCATATTCACGTTAGTCCGG+TGG 0.603339 8_2:-67379592 Msa1263980:CDS
AATGTTAGCGGAGAAAGAGG+AGG 0.605163 8_2:+67382749 None:intergenic
GATCAGAGTAAAATATGTGA+AGG 0.606192 8_2:+67377571 None:intergenic
ATTTAATGACAAGGTTACCA+AGG 0.606643 8_2:-67381315 Msa1263980:intron
TTGTTGTTGTGACACGGTGA+TGG 0.610062 8_2:+67382724 None:intergenic
TTCCCGACCAATTACTCCAA+AGG 0.611672 8_2:-67382602 Msa1263980:intron
GAGCTTGAAGTATGCAGTCA+CGG 0.613084 8_2:+67382396 None:intergenic
GTTATTACAAGACGAATATG+AGG 0.618006 8_2:+67379808 None:intergenic
CAGGAGGTTAGGAAAGGTGG+CGG 0.618785 8_2:-67377850 Msa1263980:CDS
GAGTTGTTGTTGTTGTGACA+CGG 0.620368 8_2:+67382718 None:intergenic
CATAATTGTCTGAGAGTGGT+GGG 0.620433 8_2:+67382636 None:intergenic
GCAACAGATGTAGCAGCTAG+AGG 0.629003 8_2:-67377814 Msa1263980:CDS
TGGATATGTCATGCCTACAC+CGG 0.638270 8_2:-67382453 Msa1263980:CDS
ATCGAGCAGGGAGGACCTGT+AGG 0.641289 8_2:-67377723 Msa1263980:CDS
AGAGATATGAAAATGAGTTG+AGG 0.645209 8_2:-67377633 Msa1263980:CDS
TTAAGAAATCGATTGTGCTG+TGG 0.645279 8_2:+67379755 None:intergenic
AAAGCCAACAGGAGTTGAAG+GGG 0.645317 8_2:-67381273 Msa1263980:CDS
ATCAACAACCAACACCCGCA+AGG 0.646378 8_2:+67380357 None:intergenic
TGCATGCCAAGTTCACGGGT+GGG 0.647137 8_2:+67381449 None:intergenic
ACATAATTGTCTGAGAGTGG+TGG 0.647192 8_2:+67382635 None:intergenic
AATCTATGAGATAGACGAGA+CGG 0.648321 8_2:+67379561 None:intergenic
AATATGTGAAGGTCTAGGTG+AGG 0.663605 8_2:+67377582 None:intergenic
TTGACATAATTGTCTGAGAG+TGG 0.663852 8_2:+67382632 None:intergenic
ATCATGGCTCTGTTAGATGG+AGG 0.664674 8_2:-67381233 Msa1263980:CDS
AGGAGAAGTAGGATTCGCAA+TGG 0.672118 8_2:+67382689 None:intergenic
GTTGCAACTACTATTGCTGG+AGG 0.676385 8_2:+67380430 None:intergenic
TAGATGGAGGAACATTGAGA+AGG 0.676895 8_2:-67381220 Msa1263980:CDS
AATTCATGTCATCTTCGAGG+AGG 0.678357 8_2:+67378472 None:intergenic
CAAGGTTGCTAGGATACTGG+CGG 0.692619 8_2:-67381297 Msa1263980:CDS
GAATTGTATCAAGGATAACA+GGG 0.695581 8_2:+67379294 None:intergenic
ATTATCTTCATCGAGCAGGG+AGG 0.739574 8_2:-67377732 Msa1263980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATAAAAACAATTATTTTT+GGG + chr8_2:67378226-67378245 None:intergenic 10.0%
!! AAAAAATATATTTAATGACA+AGG - chr8_2:67379004-67379023 Msa1263980:intron 10.0%
!! AATTGAAATAAATTTGAGAA+AGG + chr8_2:67377782-67377801 None:intergenic 15.0%
!!! CACATAAAAACAATTATTTT+TGG + chr8_2:67378227-67378246 None:intergenic 15.0%
!!! AAATAATTGTTTTTATGTGA+CGG - chr8_2:67378228-67378247 Msa1263980:intron 15.0%
!! TCTAGATAAGAAATAAAATA+AGG + chr8_2:67378770-67378789 None:intergenic 15.0%
!! TATTTATAATCAAATAGATG+TGG - chr8_2:67379193-67379212 Msa1263980:intron 15.0%
!!! TTTTAAGTCTTATATTTCAT+TGG - chr8_2:67379583-67379602 Msa1263980:CDS 15.0%
!! AAATATAAAAATATAAAGCC+TGG - chr8_2:67380351-67380370 Msa1263980:intron 15.0%
!! AGATCAAAGAAATAAAATAA+GGG + chr8_2:67382827-67382846 None:intergenic 15.0%
!! AAAAACTATTAGCAAAGATT+TGG - chr8_2:67378456-67378475 Msa1263980:CDS 20.0%
!! TTCTATCATAAACCATATTT+CGG + chr8_2:67378498-67378517 None:intergenic 20.0%
!!! TTGTTGAAATCATTTTAGAT+AGG - chr8_2:67378583-67378602 Msa1263980:intron 20.0%
!!! ATTTTATTTCTTATCTAGAC+AGG - chr8_2:67378771-67378790 Msa1263980:intron 20.0%
!!! AGATTTTCTTGTGTTAATAA+TGG + chr8_2:67378835-67378854 None:intergenic 20.0%
!! AAGCAATTATAGAAAGATAA+TGG + chr8_2:67380136-67380155 None:intergenic 20.0%
!! TATGCTAAATAACACTATTA+AGG + chr8_2:67380253-67380272 None:intergenic 20.0%
!! ATATAGAATGGTTTAAACTT+GGG - chr8_2:67380917-67380936 Msa1263980:intron 20.0%
!!! TATTCAATTTTTCAATCATC+AGG - chr8_2:67380984-67381003 Msa1263980:intron 20.0%
!! ATTAATTACGAAAAAGCTAA+TGG + chr8_2:67381315-67381334 None:intergenic 20.0%
!! ATAACTTTATCATATTACCT+GGG + chr8_2:67381711-67381730 None:intergenic 20.0%
!!! TTTCTAAAAACATCATATCA+TGG - chr8_2:67381818-67381837 Msa1263980:intron 20.0%
!! ATCCATATCAATCAATTAAA+TGG + chr8_2:67381915-67381934 None:intergenic 20.0%
!! TTTAATTGATTGATATGGAT+TGG - chr8_2:67381915-67381934 Msa1263980:intron 20.0%
!! TAGACTGAAACAATATAATT+TGG + chr8_2:67382106-67382125 None:intergenic 20.0%
!! TTTCAGATAAATACAATTTG+AGG + chr8_2:67382800-67382819 None:intergenic 20.0%
!! CAGATCAAAGAAATAAAATA+AGG + chr8_2:67382828-67382847 None:intergenic 20.0%
!! TGAATTTGAAGATTGATAGT+AGG - chr8_2:67377406-67377425 Msa1263980:three_prime_UTR 25.0%
! TTTGAGAAAGGAATGAATAA+TGG + chr8_2:67377770-67377789 None:intergenic 25.0%
!! TGCTTTATCGTTTTACAATA+TGG - chr8_2:67377834-67377853 Msa1263980:CDS 25.0%
!!! TTCATTTCTTATTTGCTATG+TGG - chr8_2:67378059-67378078 Msa1263980:intron 25.0%
!! TTCAACATACAAGTTTTCAA+AGG - chr8_2:67378178-67378197 Msa1263980:intron 25.0%
!! ATGGTTGAAATCATTTTATG+TGG - chr8_2:67378366-67378385 Msa1263980:intron 25.0%
!! TCTTTGCTAATAGTTTTTCT+AGG + chr8_2:67378454-67378473 None:intergenic 25.0%
! TCTATCATAAACCATATTTC+GGG + chr8_2:67378497-67378516 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr8_2:67378503-67378522 Msa1263980:CDS 25.0%
!!! ATTTTAGATAGGCACTTTTT+TGG - chr8_2:67378594-67378613 Msa1263980:intron 25.0%
!!! TTTTAGATAGGCACTTTTTT+GGG - chr8_2:67378595-67378614 Msa1263980:intron 25.0%
!! CTTCAATGAGTTGTATTTTA+TGG - chr8_2:67379170-67379189 Msa1263980:intron 25.0%
! TTATAAGTTTGTGATGCATA+TGG - chr8_2:67379613-67379632 Msa1263980:intron 25.0%
! ATAAAAAGCAATGTTAACAG+AGG + chr8_2:67379780-67379799 None:intergenic 25.0%
!! GATCAACTTTCTTCAATTTT+AGG - chr8_2:67379870-67379889 Msa1263980:intron 25.0%
!! CTTTTTATTCTTATCTGCTT+AGG - chr8_2:67380443-67380462 Msa1263980:intron 25.0%
!!! TGTTGGTCTTTTTTTTTACA+TGG - chr8_2:67380652-67380671 Msa1263980:intron 25.0%
! AAACAGTCAGAATGAATTTA+AGG + chr8_2:67380694-67380713 None:intergenic 25.0%
! GTTACAAGTGCATTAAAAAA+AGG + chr8_2:67380866-67380885 None:intergenic 25.0%
! GATATAGAATGGTTTAAACT+TGG - chr8_2:67380916-67380935 Msa1263980:intron 25.0%
! TTGATGAGTAATCAAATTGA+AGG + chr8_2:67381132-67381151 None:intergenic 25.0%
! CAATTTGATTACTCATCAAT+TGG - chr8_2:67381133-67381152 Msa1263980:intron 25.0%
! CACAAAATAACACTATAACA+TGG + chr8_2:67381370-67381389 None:intergenic 25.0%
!! AACCTCTTTTGTAAAAAACA+GGG - chr8_2:67381448-67381467 Msa1263980:CDS 25.0%
! ATACTATTTGCTTGAAAATG+AGG + chr8_2:67381595-67381614 None:intergenic 25.0%
!!! CATTTTCAAGCAAATAGTAT+AGG - chr8_2:67381595-67381614 Msa1263980:intron 25.0%
! GATAACTTTATCATATTACC+TGG + chr8_2:67381712-67381731 None:intergenic 25.0%
!!! TTTTAGAAAGTCAATCACAA+GGG + chr8_2:67381807-67381826 None:intergenic 25.0%
!!! TTTTTAGAAAGTCAATCACA+AGG + chr8_2:67381808-67381827 None:intergenic 25.0%
!! TGCCATTTAATTGATTGATA+TGG - chr8_2:67381910-67381929 Msa1263980:intron 25.0%
! ACATGAAAATCAATAATGCA+AGG + chr8_2:67381974-67381993 None:intergenic 25.0%
!!! TTGCATTATTGATTTTCATG+TGG - chr8_2:67381973-67381992 Msa1263980:intron 25.0%
! GATTAATGGCAAAATGAATT+TGG + chr8_2:67382003-67382022 None:intergenic 25.0%
! ATACAAGTCAAACTCTTATT+TGG - chr8_2:67382076-67382095 Msa1263980:intron 25.0%
! AATCTTTGATATTGTTTCCT+TGG - chr8_2:67382174-67382193 Msa1263980:intron 25.0%
!! GAACATTTAGTTCAAAAGTT+GGG - chr8_2:67382250-67382269 Msa1263980:intron 25.0%
!!! CTTAATATGCATTTTGATGA+GGG + chr8_2:67382332-67382351 None:intergenic 25.0%
! TTGAAGATTGATAGTAGGAA+AGG - chr8_2:67377411-67377430 Msa1263980:three_prime_UTR 30.0%
AGTATCAGATACAGTATAGA+TGG - chr8_2:67377439-67377458 Msa1263980:three_prime_UTR 30.0%
ATGAAGAAGAAGAAGAAGTT+GGG + chr8_2:67377529-67377548 None:intergenic 30.0%
TATGAAGAAGAAGAAGAAGT+TGG + chr8_2:67377530-67377549 None:intergenic 30.0%
ATTAGAGTTGAAATTGCCTT+TGG + chr8_2:67377745-67377764 None:intergenic 30.0%
! TCGTTTTACAATATGGTTTC+AGG - chr8_2:67377841-67377860 Msa1263980:CDS 30.0%
TTTACAATATGGTTTCAGGA+TGG - chr8_2:67377845-67377864 Msa1263980:CDS 30.0%
!!! TAATTGTTTTTATGTGACGG+TGG - chr8_2:67378231-67378250 Msa1263980:intron 30.0%
CTTCATTAATAGTTGCAGAA+TGG + chr8_2:67378288-67378307 None:intergenic 30.0%
! TTTATGTGGATTTTGTAGCA+AGG - chr8_2:67378380-67378399 Msa1263980:intron 30.0%
CTATCATAAACCATATTTCG+GGG + chr8_2:67378496-67378515 None:intergenic 30.0%
!! TTGTTATTTCATGGATGGAT+CGG + chr8_2:67378732-67378751 None:intergenic 30.0%
TCCATCCATGAAATAACAAA+AGG - chr8_2:67378733-67378752 Msa1263980:intron 30.0%
CCATCCATGAAATAACAAAA+GGG - chr8_2:67378734-67378753 Msa1263980:intron 30.0%
!!! ATCTCCCTTTTGTTATTTCA+TGG + chr8_2:67378741-67378760 None:intergenic 30.0%
ATGAAATAACAAAAGGGAGA+TGG - chr8_2:67378740-67378759 Msa1263980:intron 30.0%
!! TTCTTTTCAAGCACTAGTTT+TGG - chr8_2:67378854-67378873 Msa1263980:intron 30.0%
ATCTTTGATGCAACATATCA+AGG - chr8_2:67378947-67378966 Msa1263980:intron 30.0%
TCTTTGATGCAACATATCAA+GGG - chr8_2:67378948-67378967 Msa1263980:intron 30.0%
ATTTAATGACAAGGTTACCA+AGG - chr8_2:67379013-67379032 Msa1263980:intron 30.0%
CAATTATTATCAGTGAGATG+TGG + chr8_2:67379385-67379404 None:intergenic 30.0%
CTATTGCAGCATAAAAAGAA+AGG + chr8_2:67379457-67379476 None:intergenic 30.0%
GGTACTTATATACCACAATT+TGG + chr8_2:67379548-67379567 None:intergenic 30.0%
TTTGTGATGCATATGGTTAA+TGG - chr8_2:67379620-67379639 Msa1263980:intron 30.0%
AAATACACAAAACACACACA+AGG + chr8_2:67379686-67379705 None:intergenic 30.0%
! GTTTTGTGTATTTGATGTGT+TGG - chr8_2:67379693-67379712 Msa1263980:intron 30.0%
! CAGAGCTATTATATAGCTTT+TGG + chr8_2:67379746-67379765 None:intergenic 30.0%
AAAGTTGTCTTTCAAGCATT+TGG + chr8_2:67379939-67379958 None:intergenic 30.0%
!! ATTGTATACTTGTGCTGTTT+AGG - chr8_2:67380035-67380054 Msa1263980:intron 30.0%
!! TTGTATACTTGTGCTGTTTA+GGG - chr8_2:67380036-67380055 Msa1263980:intron 30.0%
TTTAGCTACATTAGATCACA+TGG + chr8_2:67380203-67380222 None:intergenic 30.0%
CTCAACACAAAATTTCCAAA+AGG + chr8_2:67380326-67380345 None:intergenic 30.0%
AGGGAACTAAAAAAGAAGTT+GGG + chr8_2:67380396-67380415 None:intergenic 30.0%
AAGGGAACTAAAAAAGAAGT+TGG + chr8_2:67380397-67380416 None:intergenic 30.0%
GTACTTACAAAATTGCTCAA+GGG + chr8_2:67380415-67380434 None:intergenic 30.0%
AGTACTTACAAAATTGCTCA+AGG + chr8_2:67380416-67380435 None:intergenic 30.0%
AATATGAGGTCAAAATCTTC+CGG + chr8_2:67380509-67380528 None:intergenic 30.0%
GTTATTACAAGACGAATATG+AGG + chr8_2:67380523-67380542 None:intergenic 30.0%
TGATTCGTCTGATTATTTGT+TGG - chr8_2:67380635-67380654 Msa1263980:intron 30.0%
TATATCTTTCCAAGGTCAAA+GGG + chr8_2:67380902-67380921 None:intergenic 30.0%
AACCATTCTATATCTTTCCA+AGG + chr8_2:67380910-67380929 None:intergenic 30.0%
TCTCTTATAAATACCCATGT+TGG - chr8_2:67380940-67380959 Msa1263980:intron 30.0%
CTCTTATAAATACCCATGTT+GGG - chr8_2:67380941-67380960 Msa1263980:intron 30.0%
AATTTACTAATGCCCAACAT+GGG + chr8_2:67380956-67380975 None:intergenic 30.0%
AAATTTACTAATGCCCAACA+TGG + chr8_2:67380957-67380976 None:intergenic 30.0%
GAATTGTATCAAGGATAACA+GGG + chr8_2:67381037-67381056 None:intergenic 30.0%
CTCACTAACAAATATAATGC+CGG + chr8_2:67381073-67381092 None:intergenic 30.0%
! CATTATATTTGTTAGTGAGC+AGG - chr8_2:67381074-67381093 Msa1263980:intron 30.0%
ATGAGTAATCAAATTGAAGG+AGG + chr8_2:67381129-67381148 None:intergenic 30.0%
!!! TAGTGTTATTTTGTGCTCAA+CGG - chr8_2:67381375-67381394 Msa1263980:intron 30.0%
! GAACCTCTTTTGTAAAAAAC+AGG - chr8_2:67381447-67381466 Msa1263980:intron 30.0%
!!! TACCCTGTTTTTTACAAAAG+AGG + chr8_2:67381453-67381472 None:intergenic 30.0%
! CTTTTGTAAAAAACAGGGTA+AGG - chr8_2:67381453-67381472 Msa1263980:CDS 30.0%
GGTTACTACAATATACCAAA+CGG - chr8_2:67381474-67381493 Msa1263980:CDS 30.0%
! GTTTGGGGTAATAATTTCAA+TGG + chr8_2:67381660-67381679 None:intergenic 30.0%
CAAGGATACTAGAAAATTAG+AGG + chr8_2:67381956-67381975 None:intergenic 30.0%
AATGGCAAAATGAATTTGGA+TGG + chr8_2:67381999-67382018 None:intergenic 30.0%
! TTCATTTTGCCATTAATCCA+TGG - chr8_2:67382005-67382024 Msa1263980:intron 30.0%
! TCATTTTGCCATTAATCCAT+GGG - chr8_2:67382006-67382025 Msa1263980:intron 30.0%
! ATTATTCACCCATGGATTAA+TGG + chr8_2:67382017-67382036 None:intergenic 30.0%
TGTATTAGATTATTCACCCA+TGG + chr8_2:67382025-67382044 None:intergenic 30.0%
! GGAACATTTAGTTCAAAAGT+TGG - chr8_2:67382249-67382268 Msa1263980:intron 30.0%
!! GCTTAATATGCATTTTGATG+AGG + chr8_2:67382333-67382352 None:intergenic 30.0%
! ACCATAAGTATGCTAGTTTA+AGG - chr8_2:67382364-67382383 Msa1263980:intron 30.0%
TCCTTAAACTAGCATACTTA+TGG + chr8_2:67382368-67382387 None:intergenic 30.0%
! TAAGTATGCTAGTTTAAGGA+TGG - chr8_2:67382368-67382387 Msa1263980:intron 30.0%
! GTAATGACTAGTGTTGAAAA+GGG - chr8_2:67382424-67382443 Msa1263980:CDS 30.0%
TTGTATATGTGAGTCATTTC+TGG + chr8_2:67382550-67382569 None:intergenic 30.0%
! AGATAATCTATGGCAGTTTT+TGG + chr8_2:67382583-67382602 None:intergenic 30.0%
GTACAATTCACATCAGAAAA+GGG + chr8_2:67382634-67382653 None:intergenic 30.0%
AGTACAATTCACATCAGAAA+AGG + chr8_2:67382635-67382654 None:intergenic 30.0%
AGAGATATGAAAATGAGTTG+AGG - chr8_2:67382695-67382714 Msa1263980:CDS 30.0%
AGTAAAATATGTGAAGGTCT+AGG + chr8_2:67382754-67382773 None:intergenic 30.0%
GATCAGAGTAAAATATGTGA+AGG + chr8_2:67382760-67382779 None:intergenic 30.0%
GTTAACGCTCTCAATTTATA+TGG - chr8_2:67382874-67382893 Msa1263980:exon 30.0%
GATGAAGAAAGAAAACGAAG+AGG + chr8_2:67377500-67377519 None:intergenic 35.0%
TGTTCGAACTGTATCATCTT+CGG + chr8_2:67377669-67377688 None:intergenic 35.0%
TTGACATAATTGTCTGAGAG+TGG + chr8_2:67377699-67377718 None:intergenic 35.0%
!! GAAATTGCCTTTGGAGTAAT+TGG + chr8_2:67377736-67377755 None:intergenic 35.0%
AGCAATGAGAAGATACGAAT+CGG + chr8_2:67377990-67378009 None:intergenic 35.0%
!! AAGAACAACTTAGGTTGGAA+GGG - chr8_2:67378122-67378141 Msa1263980:intron 35.0%
ATGAAGCTCTGTCATTATGA+AGG - chr8_2:67378302-67378321 Msa1263980:intron 35.0%
! GTGGAATTGTAATTTTGTGC+AGG + chr8_2:67378331-67378350 None:intergenic 35.0%
CCATATAAAATCTGAGTCAG+TGG + chr8_2:67378350-67378369 None:intergenic 35.0%
!!! CCACTGACTCAGATTTTATA+TGG - chr8_2:67378347-67378366 Msa1263980:intron 35.0%
TTGTATCATGTGCAGAAGAA+AGG + chr8_2:67378629-67378648 None:intergenic 35.0%
GTATATCCTACCATGTTGTT+CGG - chr8_2:67378680-67378699 Msa1263980:intron 35.0%
TATATCCTACCATGTTGTTC+GGG - chr8_2:67378681-67378700 Msa1263980:intron 35.0%
!! TGTTATTTCATGGATGGATC+GGG + chr8_2:67378731-67378750 None:intergenic 35.0%
!!! CCCTTTTGTTATTTCATGGA+TGG + chr8_2:67378737-67378756 None:intergenic 35.0%
TTTCTTATCTAGACAGGTTC+TGG - chr8_2:67378777-67378796 Msa1263980:intron 35.0%
TTCTTATCTAGACAGGTTCT+GGG - chr8_2:67378778-67378797 Msa1263980:intron 35.0%
CTTTGATGCAACATATCAAG+GGG - chr8_2:67378949-67378968 Msa1263980:intron 35.0%
TAGATGTGGTGACTAACAAA+TGG - chr8_2:67379207-67379226 Msa1263980:intron 35.0%
CTCGAATGTCAATCAAGTTT+AGG - chr8_2:67379424-67379443 Msa1263980:intron 35.0%
TGTATCGAAACAAACACAAC+AGG + chr8_2:67379492-67379511 None:intergenic 35.0%
ATATACCACAATTTGGCCAA+CGG + chr8_2:67379541-67379560 None:intergenic 35.0%
GTATATAAGTACCATGCTCT+TGG - chr8_2:67379555-67379574 Msa1263980:intron 35.0%
TGATGCATATGGTTAATGGA+TGG - chr8_2:67379624-67379643 Msa1263980:intron 35.0%
! GATGCATATGGTTAATGGAT+GGG - chr8_2:67379625-67379644 Msa1263980:intron 35.0%
! ATGCATATGGTTAATGGATG+GGG - chr8_2:67379626-67379645 Msa1263980:intron 35.0%
TTCAAACCATTTCCCAACAT+AGG + chr8_2:67379720-67379739 None:intergenic 35.0%
AAAAGCAATGTTAACAGAGG+CGG + chr8_2:67379777-67379796 None:intergenic 35.0%
!!! GAAAGACAACTTTTTTCGCT+TGG - chr8_2:67379946-67379965 Msa1263980:intron 35.0%
TTCTCTTCGCATTTGAATTG+TGG - chr8_2:67380006-67380025 Msa1263980:intron 35.0%
TCACATGGATAGATGAGAAT+GGG + chr8_2:67380188-67380207 None:intergenic 35.0%
ATCACATGGATAGATGAGAA+TGG + chr8_2:67380189-67380208 None:intergenic 35.0%
ATTTCCACATTTCCATGAGT+CGG - chr8_2:67380285-67380304 Msa1263980:intron 35.0%
! AAGGGGTTTTTCATACCTTT+TGG - chr8_2:67380308-67380327 Msa1263980:intron 35.0%
AAAAAAGAAGTTGGGAGACA+GGG + chr8_2:67380388-67380407 None:intergenic 35.0%
TAAAAAAGAAGTTGGGAGAC+AGG + chr8_2:67380389-67380408 None:intergenic 35.0%
TTAAGAAATCGATTGTGCTG+TGG + chr8_2:67380576-67380595 None:intergenic 35.0%
AATCTATGAGATAGACGAGA+CGG + chr8_2:67380770-67380789 None:intergenic 35.0%
CTATATCTTTCCAAGGTCAA+AGG + chr8_2:67380903-67380922 None:intergenic 35.0%
GACCTTGGAAAGATATAGAA+TGG - chr8_2:67380905-67380924 Msa1263980:intron 35.0%
CGAATTGTATCAAGGATAAC+AGG + chr8_2:67381038-67381057 None:intergenic 35.0%
ACAAATATAATGCCGGACTT+GGG + chr8_2:67381066-67381085 None:intergenic 35.0%
AACAAATATAATGCCGGACT+TGG + chr8_2:67381067-67381086 None:intergenic 35.0%
AGTAATCAAATTGAAGGAGG+AGG + chr8_2:67381126-67381145 None:intergenic 35.0%
TTACAAAAGAGGTTCTTTCC+AGG + chr8_2:67381442-67381461 None:intergenic 35.0%
ACTACAATATACCAAACGGT+AGG - chr8_2:67381478-67381497 Msa1263980:CDS 35.0%
ATTAACTCCCAAGCATCTAA+TGG + chr8_2:67381558-67381577 None:intergenic 35.0%
CAAGCAAATAGTATAGGACT+TGG - chr8_2:67381601-67381620 Msa1263980:intron 35.0%
ACATTAAATGCACACGTTTG+GGG + chr8_2:67381675-67381694 None:intergenic 35.0%
GACATTAAATGCACACGTTT+GGG + chr8_2:67381676-67381695 None:intergenic 35.0%
AGACATTAAATGCACACGTT+TGG + chr8_2:67381677-67381696 None:intergenic 35.0%
TGAAATTCATGTCATCTTCG+AGG + chr8_2:67381862-67381881 None:intergenic 35.0%
TTTCAGTCTATCCGATTAAC+TGG - chr8_2:67382116-67382135 Msa1263980:intron 35.0%
TTCAGTCTATCCGATTAACT+GGG - chr8_2:67382117-67382136 Msa1263980:intron 35.0%
CTTTGATATTGTTTCCTTGG+AGG - chr8_2:67382177-67382196 Msa1263980:intron 35.0%
AGAACGATGTTTATCCTCAA+GGG - chr8_2:67382228-67382247 Msa1263980:intron 35.0%
TTGAACTAAATGTTCCCTTG+AGG + chr8_2:67382245-67382264 None:intergenic 35.0%
TTCAAAAGTTGGGATGTCTT+TGG - chr8_2:67382260-67382279 Msa1263980:intron 35.0%
AATGCATATTAAGCCTAGTG+CGG - chr8_2:67382339-67382358 Msa1263980:intron 35.0%
! GGTAATGACTAGTGTTGAAA+AGG - chr8_2:67382423-67382442 Msa1263980:CDS 35.0%
!! GTTTGCTGTTTCTTCAATTC+AGG - chr8_2:67382459-67382478 Msa1263980:CDS 35.0%
TTTCTTCAATTCAGGAGGTT+AGG - chr8_2:67382467-67382486 Msa1263980:CDS 35.0%
TGCTCGATGAAGATAATCTA+TGG + chr8_2:67382593-67382612 None:intergenic 35.0%
ATAGATTATCTTCATCGAGC+AGG - chr8_2:67382592-67382611 Msa1263980:intron 35.0%
TAGATTATCTTCATCGAGCA+GGG - chr8_2:67382593-67382612 Msa1263980:intron 35.0%
GTTAATGTTAGCGGAGAAAG+AGG + chr8_2:67377585-67377604 None:intergenic 40.0%
! ACGGTGATGGTTAATGTTAG+CGG + chr8_2:67377594-67377613 None:intergenic 40.0%
! GAGTTGTTGTTGTTGTGACA+CGG + chr8_2:67377613-67377632 None:intergenic 40.0%
ACTGTATCATCTTCGGTAGT+AGG + chr8_2:67377662-67377681 None:intergenic 40.0%
CATAATTGTCTGAGAGTGGT+GGG + chr8_2:67377695-67377714 None:intergenic 40.0%
ACATAATTGTCTGAGAGTGG+TGG + chr8_2:67377696-67377715 None:intergenic 40.0%
!! TTGCCTTTGGAGTAATTGGT+CGG + chr8_2:67377732-67377751 None:intergenic 40.0%
ATATGGTTTCAGGATGGAAG+AGG - chr8_2:67377851-67377870 Msa1263980:intron 40.0%
!!! GCTTTGCCTCATCTTTTTTC+TGG - chr8_2:67377909-67377928 Msa1263980:intron 40.0%
! TCTCATTGCTGTTGTTGTTG+TGG - chr8_2:67378000-67378019 Msa1263980:intron 40.0%
! TCAGGAGTGTAAGCAAATTC+AGG + chr8_2:67378085-67378104 None:intergenic 40.0%
ATGAGCGAGAAGAACAACTT+AGG - chr8_2:67378113-67378132 Msa1263980:intron 40.0%
!! GAAGAACAACTTAGGTTGGA+AGG - chr8_2:67378121-67378140 Msa1263980:intron 40.0%
!! AGAACAACTTAGGTTGGAAG+GGG - chr8_2:67378123-67378142 Msa1263980:intron 40.0%
AACTAGACATGGTCCCATTA+CGG + chr8_2:67378263-67378282 None:intergenic 40.0%
GCAGAATGGAAAACTAGACA+TGG + chr8_2:67378274-67378293 None:intergenic 40.0%
AAGCTCTGTCATTATGAAGG+TGG - chr8_2:67378305-67378324 Msa1263980:intron 40.0%
TAATGAGTTGCCCCGAAATA+TGG - chr8_2:67378483-67378502 Msa1263980:CDS 40.0%
! AAGCCTTATCCCACTAATTG+GGG + chr8_2:67378552-67378571 None:intergenic 40.0%
! CAAGCCTTATCCCACTAATT+GGG + chr8_2:67378553-67378572 None:intergenic 40.0%
ATCATGTGCAGAAGAAAGGA+AGG + chr8_2:67378625-67378644 None:intergenic 40.0%
! GTTATTTCATGGATGGATCG+GGG + chr8_2:67378730-67378749 None:intergenic 40.0%
TTACTTGCATGCCAAGTTCA+CGG + chr8_2:67378887-67378906 None:intergenic 40.0%
! CAGTCATTTGCCTTTTCCAA+GGG + chr8_2:67378979-67378998 None:intergenic 40.0%
! TCAGTCATTTGCCTTTTCCA+AGG + chr8_2:67378980-67378999 None:intergenic 40.0%
GCAAAGATCATGTACCATCA+TGG - chr8_2:67379079-67379098 Msa1263980:intron 40.0%
TAGATGGAGGAACATTGAGA+AGG - chr8_2:67379108-67379127 Msa1263980:intron 40.0%
! AAGGCACAAGAGTTGGTTTA+AGG - chr8_2:67379127-67379146 Msa1263980:intron 40.0%
TCCATTGCAATTGCATTGCA+CGG + chr8_2:67379236-67379255 None:intergenic 40.0%
TTAACTTTACATCTCGCCGT+TGG - chr8_2:67379522-67379541 Msa1263980:intron 40.0%
TATAAGTACCATGCTCTTGG+AGG - chr8_2:67379558-67379577 Msa1263980:CDS 40.0%
TTAAAACACCTCCAAGAGCA+TGG + chr8_2:67379569-67379588 None:intergenic 40.0%
! TGCATATGGTTAATGGATGG+GGG - chr8_2:67379627-67379646 Msa1263980:intron 40.0%
TTGATGTGTTGGACCTATGT+TGG - chr8_2:67379704-67379723 Msa1263980:intron 40.0%
TGATGTGTTGGACCTATGTT+GGG - chr8_2:67379705-67379724 Msa1263980:intron 40.0%
ACTGTTGCAACTACTATTGC+TGG + chr8_2:67379904-67379923 None:intergenic 40.0%
!!! TTTTTTCGCTTGGAACCTTG+CGG - chr8_2:67379956-67379975 Msa1263980:intron 40.0%
AGAATCACTGAAGGCAAATC+TGG + chr8_2:67380084-67380103 None:intergenic 40.0%
TACACACACAGAATCACTGA+AGG + chr8_2:67380093-67380112 None:intergenic 40.0%
GACAGGGCTTATATAATTCC+AGG + chr8_2:67380372-67380391 None:intergenic 40.0%
!!! TGACTGTTTTTGCTTTCCAG+AGG - chr8_2:67380705-67380724 Msa1263980:intron 40.0%
!!! GACTGTTTTTGCTTTCCAGA+GGG - chr8_2:67380706-67380725 Msa1263980:intron 40.0%
GATCCATATTCACGTTAGTC+CGG - chr8_2:67380733-67380752 Msa1263980:intron 40.0%
TTCAGAACATTTGTCCTGTG+AGG - chr8_2:67381238-67381257 Msa1263980:CDS 40.0%
! AACTATTTCTCATGCCTCAC+AGG + chr8_2:67381255-67381274 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr8_2:67381402-67381421 Msa1263980:intron 40.0%
CGCATATCCATTAGATGCTT+GGG - chr8_2:67381548-67381567 Msa1263980:intron 40.0%
AATTCATGTCATCTTCGAGG+AGG + chr8_2:67381859-67381878 None:intergenic 40.0%
ATCCGATTAACTGGGAACAT+CGG - chr8_2:67382125-67382144 Msa1263980:intron 40.0%
AACCGATGTTCCCAGTTAAT+CGG + chr8_2:67382130-67382149 None:intergenic 40.0%
!! TAACTGGGAACATCGGTTTA+AGG - chr8_2:67382132-67382151 Msa1263980:intron 40.0%
TGATATTGTTTCCTTGGAGG+AGG - chr8_2:67382180-67382199 Msa1263980:intron 40.0%
GATATTGTTTCCTTGGAGGA+GGG - chr8_2:67382181-67382200 Msa1263980:intron 40.0%
ATATTGTTTCCTTGGAGGAG+GGG - chr8_2:67382182-67382201 Msa1263980:intron 40.0%
GAGAACGATGTTTATCCTCA+AGG - chr8_2:67382227-67382246 Msa1263980:intron 40.0%
AGTAGCACTCATGAAACCTT+GGG + chr8_2:67382296-67382315 None:intergenic 40.0%
! TGACTAGTGTTGAAAAGGGA+TGG - chr8_2:67382428-67382447 Msa1263980:CDS 40.0%
!! TGCTGTTTCTTCAATTCAGG+AGG - chr8_2:67382402-67382421 Msa1263980:CDS 40.0%
TCAATTCAGGAGGTTAGGAA+AGG - chr8_2:67382472-67382491 Msa1263980:intron 40.0%
ATCAGAAAAGGGTTTCCTAC+AGG + chr8_2:67382623-67382642 None:intergenic 40.0%
AATATGTGAAGGTCTAGGTG+AGG + chr8_2:67382749-67382768 None:intergenic 40.0%
AATGTTAGCGGAGAAAGAGG+AGG + chr8_2:67377582-67377601 None:intergenic 45.0%
! TTGTTGTTGTGACACGGTGA+TGG + chr8_2:67377607-67377626 None:intergenic 45.0%
AGGAGAAGTAGGATTCGCAA+TGG + chr8_2:67377642-67377661 None:intergenic 45.0%
TCTTCGGTAGTAGGAGAAGT+AGG + chr8_2:67377653-67377672 None:intergenic 45.0%
TTCCCGACCAATTACTCCAA+AGG - chr8_2:67377726-67377745 Msa1263980:CDS 45.0%
!! TGCCTTTGGAGTAATTGGTC+GGG + chr8_2:67377731-67377750 None:intergenic 45.0%
TGGATATGTCATGCCTACAC+CGG - chr8_2:67377875-67377894 Msa1263980:intron 45.0%
! GATGAGGCAAAGCTTGTTTC+TGG + chr8_2:67377902-67377921 None:intergenic 45.0%
TCACGGCCAGAAAAAAGATG+AGG + chr8_2:67377918-67377937 None:intergenic 45.0%
GAGCTTGAAGTATGCAGTCA+CGG + chr8_2:67377935-67377954 None:intergenic 45.0%
TGACTGCATACTTCAAGCTC+AGG - chr8_2:67377935-67377954 Msa1263980:intron 45.0%
GCGAGAAGAACAACTTAGGT+TGG - chr8_2:67378117-67378136 Msa1263980:intron 45.0%
AGCAAGGAGAGTAGATCAGA+TGG - chr8_2:67378396-67378415 Msa1263980:intron 45.0%
AAGGAGAGTAGATCAGATGG+AGG - chr8_2:67378399-67378418 Msa1263980:intron 45.0%
AGGAGAGTAGATCAGATGGA+GGG - chr8_2:67378400-67378419 Msa1263980:intron 45.0%
GAGGGTAGTCAAATCACTAG+AGG - chr8_2:67378418-67378437 Msa1263980:intron 45.0%
AGTCAAATCACTAGAGGCAG+AGG - chr8_2:67378424-67378443 Msa1263980:intron 45.0%
CTTATCCCACTAATTGGGGT+CGG + chr8_2:67378548-67378567 None:intergenic 45.0%
! CCAAGCCTTATCCCACTAAT+TGG + chr8_2:67378554-67378573 None:intergenic 45.0%
CCAATTAGTGGGATAAGGCT+TGG - chr8_2:67378551-67378570 Msa1263980:CDS 45.0%
ATTAGTGGGATAAGGCTTGG+TGG - chr8_2:67378554-67378573 Msa1263980:CDS 45.0%
TACTTGCATGCCAAGTTCAC+GGG + chr8_2:67378886-67378905 None:intergenic 45.0%
ACAAGGTTACCAAGGTTGCT+AGG - chr8_2:67379021-67379040 Msa1263980:intron 45.0%
TACCAAGGTTGCTAGGATAC+TGG - chr8_2:67379028-67379047 Msa1263980:intron 45.0%
CAAAGCCAACAGGAGTTGAA+GGG - chr8_2:67379054-67379073 Msa1263980:intron 45.0%
AAAGCCAACAGGAGTTGAAG+GGG - chr8_2:67379055-67379074 Msa1263980:intron 45.0%
! ACCATCATGGCTCTGTTAGA+TGG - chr8_2:67379092-67379111 Msa1263980:intron 45.0%
TCCATCTAACAGAGCCATGA+TGG + chr8_2:67379096-67379115 None:intergenic 45.0%
! ATCATGGCTCTGTTAGATGG+AGG - chr8_2:67379095-67379114 Msa1263980:intron 45.0%
! CATTGAGAAGGCACAAGAGT+TGG - chr8_2:67379120-67379139 Msa1263980:intron 45.0%
! GCACAAGAGTTGGTTTAAGG+TGG - chr8_2:67379130-67379149 Msa1263980:intron 45.0%
TCCGTGCAATGCAATTGCAA+TGG - chr8_2:67379232-67379251 Msa1263980:intron 45.0%
TGTGGCTGCAAAATGTGGAA+TGG + chr8_2:67379367-67379386 None:intergenic 45.0%
TGAGATGTGGCTGCAAAATG+TGG + chr8_2:67379372-67379391 None:intergenic 45.0%
GGATGGGGGAATTACAGATT+AGG - chr8_2:67379641-67379660 Msa1263980:intron 45.0%
GTTGGACCTATGTTGGGAAA+TGG - chr8_2:67379711-67379730 Msa1263980:intron 45.0%
TTCCCTTATGCTGCTCATTC+AGG - chr8_2:67379843-67379862 Msa1263980:CDS 45.0%
AGCCTGAATGAGCAGCATAA+GGG + chr8_2:67379848-67379867 None:intergenic 45.0%
AAGCCTGAATGAGCAGCATA+AGG + chr8_2:67379849-67379868 None:intergenic 45.0%
GTTGCAACTACTATTGCTGG+AGG + chr8_2:67379901-67379920 None:intergenic 45.0%
! TTTTTCGCTTGGAACCTTGC+GGG - chr8_2:67379957-67379976 Msa1263980:intron 45.0%
CACATTTCCATGAGTCGGAA+GGG - chr8_2:67380290-67380309 Msa1263980:intron 45.0%
ACATTTCCATGAGTCGGAAG+GGG - chr8_2:67380291-67380310 Msa1263980:intron 45.0%
CAAAGCAAGTGAGTTCTCTC+CGG - chr8_2:67380487-67380506 Msa1263980:intron 45.0%
CACTGGCAAAAACTGTCTGA+CGG + chr8_2:67380545-67380564 None:intergenic 45.0%
!! TGTGCAGCAGAAATGGACTA+AGG - chr8_2:67380602-67380621 Msa1263980:intron 45.0%
GAATATGGATCACATCCCTC+TGG + chr8_2:67380724-67380743 None:intergenic 45.0%
TCTTTCCAAGGTCAAAGGGT+GGG + chr8_2:67380898-67380917 None:intergenic 45.0%
ATCTTTCCAAGGTCAAAGGG+TGG + chr8_2:67380899-67380918 None:intergenic 45.0%
!! GGGAGCATCGAATTGTATCA+AGG + chr8_2:67381046-67381065 None:intergenic 45.0%
TCATGTGACTGAAAGGTCAC+AGG - chr8_2:67381409-67381428 Msa1263980:intron 45.0%
GCGCATATCCATTAGATGCT+TGG - chr8_2:67381547-67381566 Msa1263980:intron 45.0%
ATGTCTGTTTGAATCAGCCC+AGG - chr8_2:67381691-67381710 Msa1263980:intron 45.0%
GCAGTCTGAGAAGTCGAAAA+AGG - chr8_2:67381760-67381779 Msa1263980:intron 45.0%
TCTGAGAAGTCGAAAAAGGC+TGG - chr8_2:67381764-67381783 Msa1263980:intron 45.0%
AAAGTCAATCACAAGGGACG+TGG + chr8_2:67381801-67381820 None:intergenic 45.0%
TATTGTTTCCTTGGAGGAGG+GGG - chr8_2:67382183-67382202 Msa1263980:intron 45.0%
! CTTTGGCTTCAAATCACCCA+AGG - chr8_2:67382277-67382296 Msa1263980:intron 45.0%
GAGTAGCACTCATGAAACCT+TGG + chr8_2:67382297-67382316 None:intergenic 45.0%
ATACTTATGGTAGCCGCACT+AGG + chr8_2:67382355-67382374 None:intergenic 45.0%
ATTCAGGAGGTTAGGAAAGG+TGG - chr8_2:67382475-67382494 Msa1263980:intron 45.0%
ATTATCTTCATCGAGCAGGG+AGG - chr8_2:67382596-67382615 Msa1263980:intron 45.0%
GAAGGTCTAGGTGAGGTTTA+TGG + chr8_2:67382742-67382761 None:intergenic 45.0%
GTAGGATTCGCAATGGCTAG+TGG + chr8_2:67377635-67377654 None:intergenic 50.0%
GGTTTCAGGATGGAAGAGGT+TGG - chr8_2:67377855-67377874 Msa1263980:intron 50.0%
!! GGCAAAGCTTGTTTCTGGAC+CGG + chr8_2:67377897-67377916 None:intergenic 50.0%
TCTCGCTCATTTACGCACTC+AGG + chr8_2:67378103-67378122 None:intergenic 50.0%
ACGGTGGAATCAGCCGTAAT+GGG - chr8_2:67378247-67378266 Msa1263980:intron 50.0%
ACTAATTGGGGTCGGCTACA+TGG + chr8_2:67378540-67378559 None:intergenic 50.0%
ATGTAGCCGACCCCAATTAG+TGG - chr8_2:67378539-67378558 Msa1263980:CDS 50.0%
TGTAGCCGACCCCAATTAGT+GGG - chr8_2:67378540-67378559 Msa1263980:CDS 50.0%
CGACCCCAATTAGTGGGATA+AGG - chr8_2:67378546-67378565 Msa1263980:CDS 50.0%
TAGAGCCCGAACAACATGGT+AGG + chr8_2:67378689-67378708 None:intergenic 50.0%
GAGATAGAGCCCGAACAACA+TGG + chr8_2:67378693-67378712 None:intergenic 50.0%
CATATCAAGGGGAACACCCT+TGG - chr8_2:67378960-67378979 Msa1263980:intron 50.0%
AAGGGGAACACCCTTGGAAA+AGG - chr8_2:67378966-67378985 Msa1263980:intron 50.0%
CAAGGTTGCTAGGATACTGG+CGG - chr8_2:67379031-67379050 Msa1263980:intron 50.0%
GCAAAGCCAACAGGAGTTGA+AGG - chr8_2:67379053-67379072 Msa1263980:intron 50.0%
ATCAACAACCAACACCCGCA+AGG + chr8_2:67379974-67379993 None:intergenic 50.0%
CCTTCCGACTCATGGAAATG+TGG + chr8_2:67380292-67380311 None:intergenic 50.0%
CCACATTTCCATGAGTCGGA+AGG - chr8_2:67380289-67380308 Msa1263980:intron 50.0%
GAAAAACCCCTTCCGACTCA+TGG + chr8_2:67380300-67380319 None:intergenic 50.0%
GTGCTGTGGTATAGATGCAC+TGG + chr8_2:67380562-67380581 None:intergenic 50.0%
ACGAAGCTGTGCAGCAGAAA+TGG - chr8_2:67380595-67380614 Msa1263980:intron 50.0%
CCACCGGACTAACGTGAATA+TGG + chr8_2:67380739-67380758 None:intergenic 50.0%
CCATATTCACGTTAGTCCGG+TGG - chr8_2:67380736-67380755 Msa1263980:intron 50.0%
TGAGATAGACGAGACGGCAT+GGG + chr8_2:67380764-67380783 None:intergenic 50.0%
ATGAGATAGACGAGACGGCA+TGG + chr8_2:67380765-67380784 None:intergenic 50.0%
CTTTCCAAGGTCAAAGGGTG+GGG + chr8_2:67380897-67380916 None:intergenic 50.0%
CAATTCGATGCTCCCAAGTC+CGG - chr8_2:67381051-67381070 Msa1263980:intron 50.0%
AAGGTCACAGGTTCAAGTCC+TGG - chr8_2:67381421-67381440 Msa1263980:intron 50.0%
ACAAAGCTCCCGCATATGCA+GGG + chr8_2:67381517-67381536 None:intergenic 50.0%
! TCTAATGGATATGCGCAGCC+CGG + chr8_2:67381543-67381562 None:intergenic 50.0%
TCAATCACAAGGGACGTGGA+TGG + chr8_2:67381797-67381816 None:intergenic 50.0%
TCATGTCATCTTCGAGGAGG+AGG + chr8_2:67381856-67381875 None:intergenic 50.0%
TTCACGAGCAGCTTCTCTGT+TGG - chr8_2:67381883-67381902 Msa1263980:intron 50.0%
GAGGAGGGGGAATCAAGAAT+GGG - chr8_2:67382196-67382215 Msa1263980:intron 50.0%
AGGAGGGGGAATCAAGAATG+GGG - chr8_2:67382197-67382216 Msa1263980:intron 50.0%
GGGGAATCAAGAATGGGGAA+CGG - chr8_2:67382202-67382221 Msa1263980:intron 50.0%
GCAACAGATGTAGCAGCTAG+AGG - chr8_2:67382514-67382533 Msa1263980:intron 50.0%
CACCAGCATTATAGTCTCGC+AGG - chr8_2:67382657-67382676 Msa1263980:CDS 50.0%
CTCCTGCGAGACTATAATGC+TGG + chr8_2:67382662-67382681 None:intergenic 50.0%
GCATTATAGTCTCGCAGGAG+CGG - chr8_2:67382662-67382681 Msa1263980:CDS 50.0%
!! GCTTGTTTCTGGACCGGTGT+AGG + chr8_2:67377891-67377910 None:intergenic 55.0%
GACGGTGGAATCAGCCGTAA+TGG - chr8_2:67378246-67378265 Msa1263980:intron 55.0%
TGCATGCCAAGTTCACGGGT+GGG + chr8_2:67378882-67378901 None:intergenic 55.0%
TTGCATGCCAAGTTCACGGG+TGG + chr8_2:67378883-67378902 None:intergenic 55.0%
CGCCAGTATCCTAGCAACCT+TGG + chr8_2:67379033-67379052 None:intergenic 55.0%
ATACTGGCGGCAAAGCCAAC+AGG - chr8_2:67379044-67379063 Msa1263980:intron 55.0%
TGCTCCCCTTCAACTCCTGT+TGG + chr8_2:67379062-67379081 None:intergenic 55.0%
TCTCGCCGTTGGCCAAATTG+TGG - chr8_2:67379533-67379552 Msa1263980:intron 55.0%
!! GCGGGTGTTGGTTGTTGATG+AGG - chr8_2:67379975-67379994 Msa1263980:intron 55.0%
CTTTCCCCACCCTTTGACCT+TGG - chr8_2:67380890-67380909 Msa1263980:intron 55.0%
CATATGCAGGGTTCGGGAAG+GGG + chr8_2:67381505-67381524 None:intergenic 55.0%
GCATATGCAGGGTTCGGGAA+GGG + chr8_2:67381506-67381525 None:intergenic 55.0%
CTTCCCGAACCCTGCATATG+CGG - chr8_2:67381505-67381524 Msa1263980:CDS 55.0%
TTCCCGAACCCTGCATATGC+GGG - chr8_2:67381506-67381525 Msa1263980:CDS 55.0%
CACAAAGCTCCCGCATATGC+AGG + chr8_2:67381518-67381537 None:intergenic 55.0%
! TATGCGGGAGCTTTGTGCAC+CGG - chr8_2:67381521-67381540 Msa1263980:CDS 55.0%
TCTTGATTCCCCCTCCTCCA+AGG + chr8_2:67382194-67382213 None:intergenic 55.0%
GGAGGAGGGGGAATCAAGAA+TGG - chr8_2:67382195-67382214 Msa1263980:intron 55.0%
CAGGAGGTTAGGAAAGGTGG+CGG - chr8_2:67382478-67382497 Msa1263980:intron 55.0%
! TTGGTGCCCACCCGTGAACT+TGG - chr8_2:67378873-67378892 Msa1263980:intron 60.0%
GCTTGGAACCTTGCGGGTGT+TGG - chr8_2:67379963-67379982 Msa1263980:intron 60.0%
CGCATATGCAGGGTTCGGGA+AGG + chr8_2:67381507-67381526 None:intergenic 60.0%
CTCCCGCATATGCAGGGTTC+GGG + chr8_2:67381511-67381530 None:intergenic 60.0%
GCTCCCGCATATGCAGGGTT+CGG + chr8_2:67381512-67381531 None:intergenic 60.0%
! ATGCGGGAGCTTTGTGCACC+GGG - chr8_2:67381522-67381541 Msa1263980:CDS 60.0%
ATCGAGCAGGGAGGACCTGT+AGG - chr8_2:67382605-67382624 Msa1263980:CDS 60.0%
CGGGAAGGGGTCCTACCGTT+TGG + chr8_2:67381492-67381511 None:intergenic 65.0%
CGAGACGGCATGGGCTCCAC+CGG + chr8_2:67380755-67380774 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 67377406 67382944 67377406 ID=Msa1263980;Name=Msa1263980
chr8_2 mRNA 67377406 67382944 67377406 ID=Msa1263980-mRNA-1;Parent=Msa1263980;Name=Msa1263980-mRNA-1;_AED=0.19;_eAED=0.19;_QI=52|1|1|1|1|1|10|200|482
chr8_2 exon 67377406 67377869 67377406 ID=Msa1263980-mRNA-1:exon:22188;Parent=Msa1263980-mRNA-1
chr8_2 exon 67378446 67378586 67378446 ID=Msa1263980-mRNA-1:exon:22187;Parent=Msa1263980-mRNA-1
chr8_2 exon 67379255 67379344 67379255 ID=Msa1263980-mRNA-1:exon:22186;Parent=Msa1263980-mRNA-1
chr8_2 exon 67379557 67379625 67379557 ID=Msa1263980-mRNA-1:exon:22185;Parent=Msa1263980-mRNA-1
chr8_2 exon 67379727 67379885 67379727 ID=Msa1263980-mRNA-1:exon:22184;Parent=Msa1263980-mRNA-1
chr8_2 exon 67380354 67380458 67380354 ID=Msa1263980-mRNA-1:exon:22183;Parent=Msa1263980-mRNA-1
chr8_2 exon 67381202 67381324 67381202 ID=Msa1263980-mRNA-1:exon:22182;Parent=Msa1263980-mRNA-1
chr8_2 exon 67381448 67381561 67381448 ID=Msa1263980-mRNA-1:exon:22181;Parent=Msa1263980-mRNA-1
chr8_2 exon 67382394 67382487 67382394 ID=Msa1263980-mRNA-1:exon:22180;Parent=Msa1263980-mRNA-1
chr8_2 exon 67382603 67382944 67382603 ID=Msa1263980-mRNA-1:exon:22179;Parent=Msa1263980-mRNA-1
chr8_2 five_prime_UTR 67382893 67382944 67382893 ID=Msa1263980-mRNA-1:five_prime_utr;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67382603 67382892 67382603 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67382394 67382487 67382394 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67381448 67381561 67381448 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67381202 67381324 67381202 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67380354 67380458 67380354 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67379727 67379885 67379727 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67379557 67379625 67379557 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67379255 67379344 67379255 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67378446 67378586 67378446 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 CDS 67377606 67377869 67377606 ID=Msa1263980-mRNA-1:cds;Parent=Msa1263980-mRNA-1
chr8_2 three_prime_UTR 67377406 67377605 67377406 ID=Msa1263980-mRNA-1:three_prime_utr;Parent=Msa1263980-mRNA-1
Gene Sequence

>Msa1263980

ATGGACAGTCGAACTCTATCAGTCTCACATCTTCTTCTTCCTCTTCGTTTTCTTTCTTCATCTCAAAACCCAACTTCTTCTTCTTCTTCATACAACAACAACAATTTTGTGAAACTATTATCCTCCTCTTTCTCCGCTAACATTAACCATCACCGTGTCACAACAACAACAACTCCACTAGCCATTGCGAATCCTACTTCTCCTACTACCGAAGATGATACAGTTCGAACAACTCCCACCACTCTCAGACAATTATGTCAATATCATGTTCCCGACCAATTACTCCAAAGGATGGAAGAGGTTGGATATGTCATGCCTACACCGGTCCAGAAACAAGCTTTGCCTCATCTTTTTTCTGGCCGTGACTGCATACTTCAAGCTCAGACAGGTTCTGGGAAGACACTTGCATACTTGCTTTTGATCTATTCCATTATTAACACAAGAAAATCTTCTTTTCAAGCACTAGTTTTGGTGCCCACCCGTGAACTTGGCATGCAAGTTACCAAGGTTGCTAGGATACTGGCGGCAAAGCCAACAGGAGTTGAAGGGGAGCAAAGATCATGTACCATCATGGCTCTGTTAGATGGAGGAACATTGAGAAGGCACAAGAGTTGGTTTAAGGCTGAGCCTCCAGCAATAGTAGTTGCAACAGTTGAGAGTTTGTGCCAAATGCTTGAAAGACAACTTTTTTCGCTTGGAACCTTGCGGGTGTTGGTTGTTGATGAGGTTGACTTCATTTTCAATTCTTCAAAGCAAGTGAGTTCTCTCCGGAAGATTTTGACCTCATATTCGTCTTGTAATAACCGTCAGACAGTTTTTGCCAGTGCATCTATACCACAGCACAATCGATTTCTTAACGAAGCTGTGCAGCAGAAATGGACTAAGAGGGATGTGATCCATATTCACGTTAGTCCGGTGGAGCCCATGCCGTCTCGTCTATCTCATAGATTTATAGTATGTGATATAAAAAGAAAACTACAAACCCTGTTATCCTTGATACAATTCGATGCTCCCAAGTCCGGCATTATATTTGTTAGTGAGCAGTCTGAGAAGTCGAAAAAGGCTGGTAATTCTCCATCCACGTCCCTTGTGATTGACTTTCTAAAAACATCATATCATGGTTCTTTAGATATCCTCCTCCTCGAAGATGACATGAATTTCAATTCACGAGCAGCTTCTCTGTTGGAGGTTAGGAAAGGTGGCGGCTATCTTCTAGTAGCAACAGATGTAGCAGCTAGAGGAGTTGACTTTCCAGAAATGACTCACATATACAACTTTGATCTGCCAAAAACTGCCATAGATTATCTTCATCGAGCAGGGAGGACCTGTAGGAAACCCTTTTCTGATGTGAATTGTACTGTCACCAGCATTATAGTCTCGCAGGAGCGGTTTGTTCTGCAGAGATATGAAAATGAGTTGAGGTTTGTCTGTACAGAGCTTATTCCATAA
Protein sequence

>Msa1263980

MDSRTLSVSHLLLPLRFLSSSQNPTSSSSSYNNNNFVKLLSSSFSANINHHRVTTTTTPLAIANPTSPTTEDDTVRTTPTTLRQLCQYHVPDQLLQRMEEVGYVMPTPVQKQALPHLFSGRDCILQAQTGSGKTLAYLLLIYSIINTRKSSFQALVLVPTRELGMQVTKVARILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPPAIVVATVESLCQMLERQLFSLGTLRVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNNRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVSPVEPMPSRLSHRFIVCDIKRKLQTLLSLIQFDAPKSGIIFVSEQSEKSKKAGNSPSTSLVIDFLKTSYHGSLDILLLEDDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNFDLPKTAIDYLHRAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELRFVCTELIP*