AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0653370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0653370 MtrunA17_Chr4g0047451 91.658 947 45 1 1 947 1 913 0.0 1776
Msa0653370 MtrunA17_Chr5g0428751 30.556 828 469 23 33 825 43 799 7.79e-83 284
Msa0653370 MtrunA17_Chr1g0168681 30.049 203 130 3 414 605 743 944 8.52e-18 89.0
Msa0653370 MtrunA17_Chr1g0203461 33.858 127 82 2 428 553 798 923 5.90e-15 79.7
Msa0653370 MtrunA17_Chr7g0269931 27.830 212 141 6 403 604 1003 1212 1.57e-14 78.6
Msa0653370 MtrunA17_Chr6g0485261 26.230 244 148 7 413 630 878 1115 3.46e-13 73.9
Msa0653370 MtrunA17_Chr4g0062701 24.766 214 145 4 414 612 649 861 6.85e-13 73.2
Msa0653370 MtrunA17_Chr5g0399431 26.708 161 111 3 397 552 262 420 6.16e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0653370 AT1G65070.2 51.888 927 349 13 28 947 40 876 0.0 886
Msa0653370 AT1G65070.4 51.815 909 341 13 28 929 40 858 0.0 862
Msa0653370 AT1G65070.1 53.102 806 292 9 28 828 40 764 0.0 798
Msa0653370 AT1G65070.3 56.135 652 227 9 28 666 40 645 0.0 693
Msa0653370 AT5G54090.1 29.412 833 478 24 20 818 34 790 9.54e-78 270
Msa0653370 AT3G24320.1 25.208 361 220 10 415 742 743 1086 9.26e-18 89.4
Msa0653370 AT3G24320.2 25.208 361 220 10 415 742 498 841 9.34e-18 89.4
Msa0653370 AT4G25540.1 32.624 141 92 3 414 552 799 938 1.88e-14 78.6
Msa0653370 AT4G02070.2 30.675 163 106 4 391 550 1041 1199 1.06e-12 73.2
Msa0653370 AT4G02070.1 30.675 163 106 4 391 550 1044 1202 1.10e-12 73.2
Msa0653370 AT3G24495.1 26.577 222 141 6 412 612 826 1046 7.80e-12 70.1
Msa0653370 AT3G18524.1 29.252 147 99 4 414 557 648 792 1.00e-11 69.7
Msa0653370 AT4G17380.2 28.462 130 92 1 423 552 545 673 1.61e-11 68.9
Msa0653370 AT4G17380.1 23.881 201 143 5 423 617 545 741 1.63e-11 68.9

Find 315 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAATTCATTGGACTTTC+TGG 0.056329 4_3:+61374268 None:intergenic
CTCATTGCTTTGCACTTTCT+TGG 0.110939 4_3:-61375918 Msa0653370:CDS
ATCAATCAAGTGACTAATTT+TGG 0.146698 4_3:-61374125 Msa0653370:three_prime_UTR
TCTGCTTGCTTATTCTTTAC+AGG 0.179462 4_3:-61374151 Msa0653370:three_prime_UTR
CTCTGGAGCAACATACTTTA+TGG 0.200265 4_3:-61377676 Msa0653370:CDS
CTCCGCTCTTGCTGCTGTTC+TGG 0.212629 4_3:+61376436 None:intergenic
AAACCTTGCAACCAACTTAT+AGG 0.224407 4_3:-61376567 Msa0653370:CDS
ACACTTGTTGGTATAATTAA+AGG 0.234769 4_3:-61374077 Msa0653370:three_prime_UTR
GCAAAATTGTAATTTCCTAA+TGG 0.255352 4_3:-61377967 Msa0653370:CDS
CGAAAAGCAACTAAAAGATT+TGG 0.258652 4_3:-61375726 Msa0653370:CDS
CTTTGCTAGTAATTAGTTAC+TGG 0.262149 4_3:-61373144 Msa0653370:three_prime_UTR
ACATCATATACTCCACAATT+TGG 0.262844 4_3:-61375593 Msa0653370:CDS
CTTGTTCTCATTGATGAAAT+TGG 0.280062 4_3:-61376754 Msa0653370:CDS
CCAGAAAGTCCAATGAATTA+TGG 0.282003 4_3:-61374268 Msa0653370:CDS
ATCTGATTTGGGCTATTAAT+AGG 0.289526 4_3:+61373863 None:intergenic
TTGCATAGATTGCAATCTTT+TGG 0.292449 4_3:-61377922 Msa0653370:CDS
CTAGAATGTGCGTGGGCATC+AGG 0.296994 4_3:-61377749 Msa0653370:CDS
AGAGTACCTAAACTGAAAAT+TGG 0.301495 4_3:+61377450 None:intergenic
ACAACCTTCTGTTGTGGATT+GGG 0.306479 4_3:+61379321 None:intergenic
CAGCAGCTTGGACCCGCTTT+TGG 0.308178 4_3:-61374186 Msa0653370:three_prime_UTR
ATTCTCTCCGTTGCTGTTTC+CGG 0.310263 4_3:-61378940 Msa0653370:CDS
GTAATAGTGGGAATCTGATT+TGG 0.311339 4_3:+61373851 None:intergenic
AGCAATGGTGATATTTATTA+TGG 0.313667 4_3:-61374490 Msa0653370:CDS
CAAAATTGTAATTTCCTAAT+GGG 0.314744 4_3:-61377966 Msa0653370:CDS
TTGCATCCTCTAACTCTTGT+TGG 0.316694 4_3:+61375780 None:intergenic
TTCAAATCTATTGCTTCTTT+CGG 0.318025 4_3:+61377651 None:intergenic
CTCTGCCACGGGCTCGCACT+TGG 0.318413 4_3:+61373416 None:intergenic
AGGTCAAACCAAGGAAGTTT+TGG 0.325111 4_3:+61377057 None:intergenic
AACCTTGCAACCAACTTATA+GGG 0.326348 4_3:-61376566 Msa0653370:CDS
TCATTAGATCAGAACGAAAA+AGG 0.327607 4_3:-61377866 Msa0653370:CDS
CTTGGCAGGCAGATGCATTC+CGG 0.328681 4_3:+61377086 None:intergenic
AATTCTTCTGAGTTGGGTAT+TGG 0.332008 4_3:-61377279 Msa0653370:CDS
AGGTTTGATCGAGAAGCTTT+TGG 0.334460 4_3:+61379025 None:intergenic
GGAGATCATAACAGAGAATA+TGG 0.336167 4_3:-61373920 Msa0653370:three_prime_UTR
AGGGATTGAGGGTTTGTTGA+TGG 0.339868 4_3:+61379230 None:intergenic
TGCTGTTAGCTTATTGCAAT+AGG 0.342564 4_3:+61374204 None:intergenic
GACCTTATCCTTGCGGATAT+TGG 0.343828 4_3:-61377039 Msa0653370:CDS
TTCTTAGATGTTTGCACCGC+TGG 0.347990 4_3:+61374466 None:intergenic
TACAACCTTCTGTTGTGGAT+TGG 0.351481 4_3:+61379320 None:intergenic
GATCGACGCTTAGTAATAAA+TGG 0.355822 4_3:+61377771 None:intergenic
GGGATTGAGGGTTTGTTGAT+GGG 0.370731 4_3:+61379231 None:intergenic
GAAAAGCAACTAAAAGATTT+GGG 0.371137 4_3:-61375725 Msa0653370:CDS
AGCATTCACTTCCACTTCAA+TGG 0.372505 4_3:-61379103 Msa0653370:CDS
ATCAGAGATAAAATATTTGT+TGG 0.373046 4_3:-61377541 Msa0653370:CDS
GGCCTAATCGTACCTGTCTT+TGG 0.373246 4_3:-61373253 Msa0653370:three_prime_UTR
TCTGAGTTGGGTATTGGAAA+TGG 0.374198 4_3:-61377273 Msa0653370:CDS
AAGGAGAAGCGAGGGATTGA+GGG 0.374390 4_3:+61379219 None:intergenic
ACGGGCGTTGTTGGCGGCGG+AGG 0.376941 4_3:+61379077 None:intergenic
TCCTTGCAATACGTGGCCTT+TGG 0.378650 4_3:+61373321 None:intergenic
GATGCCCGGCCTGAGCTCAT+TGG 0.380731 4_3:+61373614 None:intergenic
GAGTACGTCCGACGGGTAAA+CGG 0.383430 4_3:+61379058 None:intergenic
ATTACAAAGAGAACTGAATA+TGG 0.386756 4_3:+61374370 None:intergenic
AACTAGTTCTCCCACTCATC+AGG 0.387558 4_3:-61375414 Msa0653370:CDS
CAAGGTCTTCTGCCTCCCTT+TGG 0.387704 4_3:+61375846 None:intergenic
GTTCTGAATGCCAGCAGCTC+TGG 0.388227 4_3:-61377693 Msa0653370:CDS
AACCAACTTATAGGGTTCTC+TGG 0.388468 4_3:-61376558 Msa0653370:CDS
GTAATACATGGGATGGGCAC+TGG 0.389103 4_3:-61374352 Msa0653370:CDS
TTGTAATTTCCTAATGGGCT+TGG 0.389277 4_3:-61377961 Msa0653370:CDS
GAAACAATCTTGGTACAGTA+TGG 0.389406 4_3:-61375503 Msa0653370:CDS
TTAAGCATAGCGCAATCTAT+TGG 0.392431 4_3:-61376511 Msa0653370:CDS
AAGTACAATGCATCGATTAT+TGG 0.396471 4_3:-61373297 Msa0653370:three_prime_UTR
TCCTAATGGGCTTGGAGCGC+AGG 0.398236 4_3:-61377953 Msa0653370:CDS
ATCTCCCTAAGCTAAAAGTT+TGG 0.402641 4_3:+61373937 None:intergenic
GAAGGAGAAGCGAGGGATTG+AGG 0.404110 4_3:+61379218 None:intergenic
AATGCTCTATCAGTCATTAC+AGG 0.405453 4_3:-61376410 Msa0653370:CDS
CAAGTCCGTGTGAAGGGATT+GGG 0.412733 4_3:-61375566 Msa0653370:CDS
GTTCACAATTTCTGCATGAA+TGG 0.416425 4_3:+61376345 None:intergenic
GACGGGTAAACGGGCGTTGT+TGG 0.416611 4_3:+61379068 None:intergenic
GTCATCTCAGGACCTAATAC+TGG 0.416951 4_3:-61377162 Msa0653370:CDS
GCTGTTAGCTTATTGCAATA+GGG 0.420312 4_3:+61374205 None:intergenic
GTTGACTTCAAAATTAGATC+TGG 0.420665 4_3:-61377198 Msa0653370:CDS
TATGGCAAAGGAAGCTCAAC+AGG 0.420669 4_3:-61375804 Msa0653370:CDS
GATCTTTGCAAAAGAAGAAA+AGG 0.421030 4_3:+61375868 None:intergenic
CTCCAATATCCGCAAGGATA+AGG 0.422194 4_3:+61377037 None:intergenic
TGTCTTTGGTGCATACTGAT+AGG 0.425729 4_3:-61373239 Msa0653370:three_prime_UTR
TGCTGATCTAAGTACTTTGA+AGG 0.425952 4_3:-61376635 Msa0653370:CDS
TGCTCCAATGAGCTCAGGCC+GGG 0.426132 4_3:-61373618 Msa0653370:three_prime_UTR
TCAGTTCTCTTTGTAATACA+TGG 0.427691 4_3:-61374364 Msa0653370:CDS
ATTTGAACAACATGGAAGTT+AGG 0.428354 4_3:-61377635 Msa0653370:CDS
GGCAGAGCAGACTGTGGCTT+CGG 0.429255 4_3:-61373400 Msa0653370:three_prime_UTR
TAATAGTGGGAATCTGATTT+GGG 0.431781 4_3:+61373852 None:intergenic
ACTAGAGTGGTGGTCATCTC+AGG 0.432380 4_3:-61377174 Msa0653370:CDS
TAATACATGGGATGGGCACT+GGG 0.432402 4_3:-61374351 Msa0653370:CDS
GTCTGGAAATTCTTCTGAGT+TGG 0.433211 4_3:-61377286 Msa0653370:CDS
GTAGCAGAAGCAAGGTTTGA+AGG 0.434423 4_3:+61379200 None:intergenic
ACAGGTCCAACAAGAGTTAG+AGG 0.437103 4_3:-61375786 Msa0653370:CDS
GCATTCAGAACTATACCTTC+TGG 0.438902 4_3:+61377705 None:intergenic
TCCTGCGCTCCAAGCCCATT+AGG 0.439036 4_3:+61377952 None:intergenic
GAAGAACACTCGCTGCTGCC+AGG 0.439097 4_3:-61378882 Msa0653370:CDS
GCCTATGCTCAATGGATGAA+TGG 0.441853 4_3:-61377480 Msa0653370:CDS
AATCAAGACCACCACTGTGC+TGG 0.442307 4_3:-61373498 Msa0653370:three_prime_UTR
GCAAGTCCGTGTGAAGGGAT+TGG 0.444020 4_3:-61375567 Msa0653370:CDS
TGAGTGGGAGAACTAGTTGC+AGG 0.444981 4_3:+61375419 None:intergenic
TCTGGAAATTCTTCTGAGTT+GGG 0.448364 4_3:-61377285 Msa0653370:CDS
TGCTGAGAGTTGCTTGCATA+TGG 0.449310 4_3:+61379122 None:intergenic
CCTATGCTCAATGGATGAAT+GGG 0.451608 4_3:-61377479 Msa0653370:CDS
ACAGTACATCCATAATTCAT+TGG 0.451719 4_3:+61374259 None:intergenic
GAGCTCATTGGAGCACTCCT+TGG 0.453654 4_3:+61373626 None:intergenic
AGAAAAGTCCAAAACTTCCT+TGG 0.454680 4_3:-61377065 Msa0653370:CDS
CGATTTAACGGTAAATATTG+AGG 0.455289 4_3:-61377373 Msa0653370:CDS
ACCACCACTGTGCTGGGCAC+AGG 0.455798 4_3:-61373491 Msa0653370:three_prime_UTR
CGTAGGCACCGTCTCTGAAA+TGG 0.456825 4_3:-61373454 Msa0653370:three_prime_UTR
GCATTCACTTCCACTTCAAT+GGG 0.457389 4_3:-61379102 Msa0653370:CDS
AGCACAGTGGTGGTCTTGAT+TGG 0.457759 4_3:+61373500 None:intergenic
AATCCTGGACTCTTTATTGA+AGG 0.459366 4_3:-61377835 Msa0653370:CDS
TAGACGTGAAACGATGCTTA+TGG 0.459950 4_3:-61375822 Msa0653370:CDS
CTTTAATTATTGAATTGAGT+TGG 0.464631 4_3:+61375696 None:intergenic
TTCAAACTCTGAAGCGGCCG+AGG 0.466077 4_3:-61377610 Msa0653370:CDS
ACCAACTTATAGGGTTCTCT+GGG 0.467907 4_3:-61376557 Msa0653370:CDS
TTCAATGAAAACGTTGGGCC+TGG 0.468162 4_3:-61377127 Msa0653370:CDS
CTTATTGCAATAGGGGAATG+AGG 0.468243 4_3:+61374213 None:intergenic
ACATACGTAAACACACTTGT+TGG 0.471238 4_3:-61374089 Msa0653370:three_prime_UTR
AGCCACAGTCTGCTCTGCCA+CGG 0.473871 4_3:+61373404 None:intergenic
GGATTGAGGGTTTGTTGATG+GGG 0.474954 4_3:+61379232 None:intergenic
GCAGGATTCTTTGCACTTGG+TGG 0.477236 4_3:+61375437 None:intergenic
CCCTGTGCCCAGCACAGTGG+TGG 0.477450 4_3:+61373490 None:intergenic
AGTACGTCCGACGGGTAAAC+GGG 0.478043 4_3:+61379059 None:intergenic
GTATGTTGCTCCAGAGCTGC+TGG 0.478675 4_3:+61377683 None:intergenic
GCCACAGTGGTAGAATTGCC+TGG 0.478854 4_3:-61375533 Msa0653370:CDS
GGGTAAACGGGCGTTGTTGG+CGG 0.478868 4_3:+61379071 None:intergenic
CTCATTGATGAAATTGGTAG+TGG 0.480474 4_3:-61376748 Msa0653370:CDS
TAAACGGGCGTTGTTGGCGG+CGG 0.480719 4_3:+61379074 None:intergenic
CCACCACTGTGCTGGGCACA+GGG 0.482069 4_3:-61373490 Msa0653370:three_prime_UTR
ACGGTGCCTACGTTGGCAAC+GGG 0.482091 4_3:+61373465 None:intergenic
AGAGGATGCAAAATCTCAAA+TGG 0.483805 4_3:-61375768 Msa0653370:CDS
ATCTAAGTACTTTGAAGGAA+AGG 0.486923 4_3:-61376630 Msa0653370:CDS
TCTAAGTACTTTGAAGGAAA+GGG 0.492540 4_3:-61376629 Msa0653370:CDS
GCCACAGTCTGCTCTGCCAC+GGG 0.492659 4_3:+61373405 None:intergenic
ACGCAGATATTGTAAGATAC+TGG 0.493946 4_3:+61376693 None:intergenic
GATAATGTCACACTAAGGTC+TGG 0.494415 4_3:-61377303 Msa0653370:CDS
ACTGCTTCAATGAAAACGTT+GGG 0.494465 4_3:-61377132 Msa0653370:CDS
GAAGAAAAGGAAAAGAGTGA+AGG 0.495632 4_3:+61375881 None:intergenic
CAAGAGCTGCCTATGCTCAA+TGG 0.496220 4_3:-61377488 Msa0653370:CDS
TCTTCGAACCGTGCAAAGCT+CGG 0.496479 4_3:+61378900 None:intergenic
CGCTGATTGCCATCTCAAGA+TGG 0.497377 4_3:+61374401 None:intergenic
CTTCGAACCGTGCAAAGCTC+GGG 0.497736 4_3:+61378901 None:intergenic
TTCAGTTTAGGTACTCTTGG+AGG 0.498097 4_3:-61377444 Msa0653370:CDS
TTTGCAGGGTGAAAAGATCA+AGG 0.499744 4_3:-61373698 Msa0653370:intron
GTTGCAGGATTCTTTGCACT+TGG 0.499764 4_3:+61375434 None:intergenic
GATGGGGATGAAGAGGTTGC+AGG 0.501851 4_3:+61379248 None:intergenic
ATGCGGTTCAACGCCGTCTA+CGG 0.502292 4_3:-61373654 Msa0653370:three_prime_UTR
GTTTGATAGTTTGAAACACT+TGG 0.502558 4_3:-61378854 Msa0653370:CDS
GATTTAACGGTAAATATTGA+GGG 0.503513 4_3:-61377372 Msa0653370:CDS
ATCAAGACCACCACTGTGCT+GGG 0.507288 4_3:-61373497 Msa0653370:three_prime_UTR
GATTGGTATCGGTGTGGCGG+AGG 0.508465 4_3:+61373517 None:intergenic
ACCTGCTTTCCCTGATGAGT+GGG 0.510949 4_3:+61375404 None:intergenic
CACCAAAGACAGGTACGATT+AGG 0.511658 4_3:+61373251 None:intergenic
TGTGCAGGATGACGATTTAA+CGG 0.511920 4_3:-61377385 Msa0653370:CDS
TCTCTTTGTAATACATGGGA+TGG 0.512107 4_3:-61374359 Msa0653370:CDS
TATGCGGCATCCATTACTCC+TGG 0.512692 4_3:-61377349 Msa0653370:CDS
CTAATGTAGAAACCACTGAA+TGG 0.515075 4_3:-61374544 Msa0653370:intron
AAAATACCCTCGCCAAAAGC+GGG 0.516421 4_3:+61374174 None:intergenic
GAACAAGGTGGAACTTATCA+TGG 0.516489 4_3:+61373550 None:intergenic
ACCACTGAATGGAAAATCCC+GGG 0.517125 4_3:-61374533 Msa0653370:CDS
CAATGACATTGCGGTTGTGC+AGG 0.517565 4_3:-61377400 Msa0653370:CDS
AAGGAAAAGAGTGAAGGAGA+TGG 0.519701 4_3:+61375887 None:intergenic
CTGTTAGCTTATTGCAATAG+GGG 0.520724 4_3:+61374206 None:intergenic
GACTATTCCCGAGCTTTGCA+CGG 0.520791 4_3:-61378908 Msa0653370:CDS
ATGCGATCAGCGCCACTGAT+GGG 0.523837 4_3:+61375617 None:intergenic
AACCCTATAAGTTGGTTGCA+AGG 0.524314 4_3:+61376564 None:intergenic
AGGAGTGCTCCAATGAGCTC+AGG 0.524655 4_3:-61373623 Msa0653370:three_prime_UTR
AGGGTTCTCTGGGGATGTAT+CGG 0.524805 4_3:-61376547 Msa0653370:CDS
GAAACTGTCAAGAGCGTGGT+GGG 0.524926 4_3:-61373579 Msa0653370:three_prime_UTR
GCATCGTTTCACGTCTATCA+AGG 0.526470 4_3:+61375828 None:intergenic
CCACAGTGGTAGAATTGCCT+GGG 0.526487 4_3:-61375532 Msa0653370:CDS
TTCTCATTCACACACACCTC+CGG 0.528546 4_3:-61373803 Msa0653370:intron
TCCCACTCATCAGGGAAAGC+AGG 0.529174 4_3:-61375405 Msa0653370:intron
GGAGAATGCAGTTGCGCCAA+AGG 0.530252 4_3:-61373337 Msa0653370:three_prime_UTR
TGTGGCTTCGGCGTGGCAGA+AGG 0.530744 4_3:-61373388 Msa0653370:three_prime_UTR
TGCCGCAGAGAAGGAACATA+AGG 0.531308 4_3:-61373274 Msa0653370:three_prime_UTR
GTTCTGATCTAATGATCTCC+AGG 0.531958 4_3:+61377874 None:intergenic
ACTCAAAATTGCTCTTTCCT+CGG 0.533024 4_3:+61377593 None:intergenic
GTGCTCCAATGAGCTCAGGC+CGG 0.534332 4_3:-61373619 Msa0653370:three_prime_UTR
AACCACTGAATGGAAAATCC+CGG 0.535658 4_3:-61374534 Msa0653370:CDS
CTTCCTTCAATAAAGAGTCC+AGG 0.535939 4_3:+61377832 None:intergenic
CAGTTCTCTTTGTAATACAT+GGG 0.538091 4_3:-61374363 Msa0653370:CDS
TCTTCAACGGTCTTGATGCC+CGG 0.538757 4_3:+61373600 None:intergenic
GACGGTGCCTACGTTGGCAA+CGG 0.539764 4_3:+61373464 None:intergenic
TGGGCATCAGGGCTTCGTAT+AGG 0.539792 4_3:-61377737 Msa0653370:CDS
CAAACTATCAAACAATTCCC+TGG 0.540992 4_3:+61378864 None:intergenic
GTGTGGCGGAGGATCTCATC+GGG 0.543492 4_3:+61373528 None:intergenic
GATTTGGGCTATTAATAGGA+AGG 0.544697 4_3:+61373867 None:intergenic
GTTTGTTGATGGGGATGAAG+AGG 0.545453 4_3:+61379241 None:intergenic
TAATTGACCATGCACAAAAG+TGG 0.545555 4_3:-61376474 Msa0653370:CDS
GGATTGGACTGAGTTGGACT+CGG 0.547239 4_3:+61379173 None:intergenic
GGAGAGCAAGTCCGTGTGAA+GGG 0.549755 4_3:-61375572 Msa0653370:CDS
GCTCTTGACAGTTTCTTCAA+CGG 0.549867 4_3:+61373587 None:intergenic
CCCCAGAGAACCCTATAAGT+TGG 0.550494 4_3:+61376556 None:intergenic
AAGGTTTGAAGGAGAAGCGA+GGG 0.550811 4_3:+61379211 None:intergenic
TTGTTGTTGAGGAATGAGTC+TGG 0.550825 4_3:+61378996 None:intergenic
TTATTGCAATAGGGGAATGA+GGG 0.552632 4_3:+61374214 None:intergenic
GAAAGAGCCACGCCTTCTGA+AGG 0.552865 4_3:+61376718 None:intergenic
GCTTGCTTATTCTTTACAGG+AGG 0.553481 4_3:-61374148 Msa0653370:three_prime_UTR
CGGACTTGCTCTCCAAATTG+TGG 0.554429 4_3:+61375581 None:intergenic
TGGGGATGATGAAACAATCT+TGG 0.554483 4_3:-61375513 Msa0653370:CDS
TTTACTACAACCTTCTGTTG+TGG 0.555632 4_3:+61379315 None:intergenic
GTTCATCTCTAAGTTACCCC+GGG 0.556248 4_3:+61374516 None:intergenic
GTCTGTTGGAGTACGTCCGA+CGG 0.557543 4_3:+61379050 None:intergenic
AGAGACGACTCCAGGAGTAA+TGG 0.558135 4_3:+61377339 None:intergenic
GTCTCCGATGTTCCATCGAG+TGG 0.560814 4_3:-61373358 Msa0653370:three_prime_UTR
AACCAGAACAGCAGCAAGAG+CGG 0.560885 4_3:-61376438 Msa0653370:CDS
AGGTGGAACTTATCATGGAC+AGG 0.561018 4_3:+61373555 None:intergenic
CTCCTTGGCGTATCCGTAGA+CGG 0.561808 4_3:+61373641 None:intergenic
AGGTTGCAGGTGAGTTGCAT+CGG 0.562147 4_3:+61379261 None:intergenic
TCTGCGTGAACATGTTAACT+TGG 0.562499 4_3:-61376677 Msa0653370:CDS
AAGAACACTCGCTGCTGCCA+GGG 0.563118 4_3:-61378881 Msa0653370:CDS
GCAATAAGCTAACAGCAGCT+TGG 0.564108 4_3:-61374198 Msa0653370:three_prime_UTR
TATAGGTATTTGCTTCCAGA+AGG 0.564358 4_3:-61377720 Msa0653370:CDS
GATTATTGGTGCCGCAGAGA+AGG 0.567110 4_3:-61373283 Msa0653370:three_prime_UTR
TCTGTTGGAGTACGTCCGAC+GGG 0.568179 4_3:+61379051 None:intergenic
TGATAGAGCAAGTGAAGACC+TGG 0.568238 4_3:-61377892 Msa0653370:CDS
CTCTTTGTAATACATGGGAT+GGG 0.569356 4_3:-61374358 Msa0653370:CDS
TTACTCCAAGTGCGAGCCCG+TGG 0.570477 4_3:-61373421 Msa0653370:three_prime_UTR
AGGTTGCAATTCTGTTGAAG+AGG 0.570911 4_3:-61377424 Msa0653370:CDS
GCATCACTTATGTCAAAAGC+CGG 0.571118 4_3:-61377105 Msa0653370:CDS
GGAGGATCTCATCGGGAACA+AGG 0.575130 4_3:+61373535 None:intergenic
TGCGGATATTGGAGATCACC+AGG 0.577563 4_3:-61377028 Msa0653370:intron
ATAGCCTCAAAACTCTCGAA+TGG 0.578502 4_3:-61379149 Msa0653370:CDS
AGGAATGAGTCTGGCAGCGG+AGG 0.579503 4_3:+61379005 None:intergenic
GTGGTGGTCTTGATTGGTAT+CGG 0.581002 4_3:+61373506 None:intergenic
TTCCTCCCAATCCCTTCACA+CGG 0.581458 4_3:+61375561 None:intergenic
GTACTTCTCCTTGCAATACG+TGG 0.582192 4_3:+61373314 None:intergenic
AAGATTGTTTCATCATCCCC+AGG 0.584283 4_3:+61375515 None:intergenic
AACTGCTTCAATGAAAACGT+TGG 0.585712 4_3:-61377133 Msa0653370:CDS
TGGAGAGCAAGTCCGTGTGA+AGG 0.586036 4_3:-61375573 Msa0653370:CDS
TGAAACGATGCTTATGGCAA+AGG 0.587621 4_3:-61375816 Msa0653370:CDS
AACTGATCCTTCAGAAGGCG+TGG 0.588853 4_3:-61376725 Msa0653370:CDS
TATCAGTATGCACCAAAGAC+AGG 0.589742 4_3:+61373241 None:intergenic
TTAGAGATGAACAGCAGCAA+TGG 0.589819 4_3:-61374505 Msa0653370:CDS
TTTGTTGGATAAAATTCTTG+AGG 0.589996 4_3:-61377526 Msa0653370:CDS
TGTTCATCTCTAAGTTACCC+CGG 0.590270 4_3:+61374515 None:intergenic
GCTATCGGATTGGACTGAGT+TGG 0.590319 4_3:+61379167 None:intergenic
ACTAGTTCTCCCACTCATCA+GGG 0.590763 4_3:-61375413 Msa0653370:CDS
TTGAGGAATGAGTCTGGCAG+CGG 0.591996 4_3:+61379002 None:intergenic
TTTCAGATAATGTCACACTA+AGG 0.593354 4_3:-61377308 Msa0653370:CDS
TACCTGCTTTCCCTGATGAG+TGG 0.594282 4_3:+61375403 None:intergenic
TTCTCCACTCGATGGAACAT+CGG 0.594689 4_3:+61373354 None:intergenic
TAGAATGTGCGTGGGCATCA+GGG 0.594705 4_3:-61377748 Msa0653370:CDS
GGCGGAGGAGCCCATTGAAG+TGG 0.595273 4_3:+61379092 None:intergenic
CCGTCTCTGAAATGGCGGTG+AGG 0.595577 4_3:-61373446 Msa0653370:three_prime_UTR
AATGCGATCAGCGCCACTGA+TGG 0.596091 4_3:+61375616 None:intergenic
TTCAGAGACGGTGCCTACGT+TGG 0.598137 4_3:+61373458 None:intergenic
GCGTCGATCTAGAATGTGCG+TGG 0.598379 4_3:-61377757 Msa0653370:CDS
AATTGACCATGCACAAAAGT+GGG 0.600519 4_3:-61376473 Msa0653370:CDS
GGCCTTATGTTCCTTCTCTG+CGG 0.600875 4_3:+61373272 None:intergenic
TAGGCTTTCAAACTCTGAAG+CGG 0.601365 4_3:-61377616 Msa0653370:CDS
GCTGTTGGTTCTCCCATCAG+TGG 0.602482 4_3:-61375629 Msa0653370:CDS
GAAGGGTGAAGCTAATGAGT+AGG 0.602642 4_3:+61373885 None:intergenic
ATCTCAGGACCTAATACTGG+AGG 0.603222 4_3:-61377159 Msa0653370:CDS
AAAACCCAATCCACAACAGA+AGG 0.603222 4_3:-61379325 Msa0653370:five_prime_UTR
CAACTGCATTCTCCACTCGA+TGG 0.604282 4_3:+61373346 None:intergenic
GCATACTGATAGGATAGCTA+AGG 0.606425 4_3:-61373229 Msa0653370:three_prime_UTR
GCCAAAGGCCACGTATTGCA+AGG 0.606843 4_3:-61373322 Msa0653370:three_prime_UTR
ATTTGGGCTATTAATAGGAA+GGG 0.608624 4_3:+61373868 None:intergenic
CTTGATTGGTATCGGTGTGG+CGG 0.609440 4_3:+61373514 None:intergenic
AGCTGCGATCCATCTTGAGA+TGG 0.610710 4_3:-61374410 Msa0653370:CDS
CTGTATCTAATCATTCACAC+AGG 0.610846 4_3:-61378828 Msa0653370:intron
GGGAATAGTCAACAATCTAC+CGG 0.610891 4_3:+61378921 None:intergenic
AGCAATAGATTTGAACAACA+TGG 0.612310 4_3:-61377643 Msa0653370:CDS
GTCCGTGTGAAGGGATTGGG+AGG 0.612668 4_3:-61375563 Msa0653370:CDS
AGCAGACTGTGGCTTCGGCG+TGG 0.612873 4_3:-61373395 Msa0653370:three_prime_UTR
TCGGTTGAGTAGCAGAAGCA+AGG 0.613416 4_3:+61379192 None:intergenic
AAAGCTCATACTCCTGCTGT+TGG 0.614300 4_3:-61375644 Msa0653370:CDS
GAGTGAAGGAGATGGATAGA+CGG 0.616345 4_3:+61375895 None:intergenic
GGATCTACGAGGTATGCGAC+TGG 0.616506 4_3:-61374437 Msa0653370:CDS
AGACGGCGTTGAACCGCATG+AGG 0.616715 4_3:+61373658 None:intergenic
AGGGCTCCCGTTGCCAACGT+AGG 0.619019 4_3:-61373471 Msa0653370:three_prime_UTR
GCTTCTAAAAGCGCGTCACA+AGG 0.619119 4_3:-61377243 Msa0653370:CDS
CGCCGTCTACGGATACGCCA+AGG 0.620888 4_3:-61373643 Msa0653370:three_prime_UTR
AATTAGATCTGGAACTAGAG+TGG 0.621351 4_3:-61377187 Msa0653370:CDS
AACAACGCCCGTTTACCCGT+CGG 0.621448 4_3:-61379066 Msa0653370:CDS
CGGTAAATATTGAGGGTATG+CGG 0.621592 4_3:-61377365 Msa0653370:CDS
CTGATGGGAGAACCAACAGC+AGG 0.622975 4_3:+61375632 None:intergenic
CCCATTCATCCATTGAGCAT+AGG 0.623957 4_3:+61377479 None:intergenic
GGTGTGGCGGAGGATCTCAT+CGG 0.625467 4_3:+61373527 None:intergenic
AGTGGAACTGATCCTTCAGA+AGG 0.626344 4_3:-61376730 Msa0653370:CDS
TTGGTTTGACCTTATCCTTG+CGG 0.628002 4_3:-61377046 Msa0653370:CDS
GCCCGTGGCAGAGCAGACTG+TGG 0.630848 4_3:-61373406 Msa0653370:three_prime_UTR
CAAGGTTTGAAGGAGAAGCG+AGG 0.631968 4_3:+61379210 None:intergenic
GAAAAGTCGAGTTGTTGTTG+AGG 0.632731 4_3:+61378985 None:intergenic
CCTCACCGCCATTTCAGAGA+CGG 0.633755 4_3:+61373446 None:intergenic
CAATCTACCGGAAACAGCAA+CGG 0.634527 4_3:+61378933 None:intergenic
TTCCAGTGAAAATTCCATTG+CGG 0.649211 4_3:+61376588 None:intergenic
ACAAGTAATACTTCCTCATG+CGG 0.649841 4_3:-61373671 Msa0653370:three_prime_UTR
CGTCGATCTAGAATGTGCGT+GGG 0.653354 4_3:-61377756 Msa0653370:CDS
TGACCATGCACAAAAGTGGG+TGG 0.654188 4_3:-61376470 Msa0653370:CDS
GGGTATTGGAAATGGAACAA+TGG 0.654745 4_3:-61377265 Msa0653370:CDS
GAACAGCAGCAAGAGCGGAG+AGG 0.655853 4_3:-61376433 Msa0653370:CDS
GCAAACATCTAAGAATACTG+TGG 0.660918 4_3:-61374458 Msa0653370:CDS
GCTCTATCAGTCATTACAGG+AGG 0.665919 4_3:-61376407 Msa0653370:CDS
AAACTGTCAAGAGCGTGGTG+GGG 0.666765 4_3:-61373578 Msa0653370:three_prime_UTR
TGAAGAAACTGTCAAGAGCG+TGG 0.667370 4_3:-61373583 Msa0653370:three_prime_UTR
TCTCAGGACCTAATACTGGA+GGG 0.667789 4_3:-61377158 Msa0653370:CDS
GGTGATCTCCAATATCCGCA+AGG 0.671731 4_3:+61377031 None:intergenic
TAGATCTGGAACTAGAGTGG+TGG 0.673809 4_3:-61377184 Msa0653370:CDS
GCAGGTGAGTTGCATCGGTG+TGG 0.676745 4_3:+61379266 None:intergenic
ACTTAGATCAGCATAATGAG+TGG 0.681388 4_3:+61376645 None:intergenic
AGAAACTGTCAAGAGCGTGG+TGG 0.681914 4_3:-61373580 Msa0653370:three_prime_UTR
CTATGCTCAATGGATGAATG+GGG 0.683732 4_3:-61377478 Msa0653370:CDS
GAGCCCTGTGCCCAGCACAG+TGG 0.686300 4_3:+61373487 None:intergenic
GGTCTTGATTGGTATCGGTG+TGG 0.686331 4_3:+61373511 None:intergenic
CACAGTGGTAGAATTGCCTG+GGG 0.691114 4_3:-61375531 Msa0653370:CDS
AGGCACCGTCTCTGAAATGG+CGG 0.693423 4_3:-61373451 Msa0653370:three_prime_UTR
TGATATTTATTATGGTCCAG+CGG 0.693969 4_3:-61374482 Msa0653370:CDS
AATTGTGAACGTGTACTCTG+AGG 0.698166 4_3:-61376332 Msa0653370:intron
AATACATGGGATGGGCACTG+GGG 0.701367 4_3:-61374350 Msa0653370:CDS
GGATCTCATCGGGAACAAGG+TGG 0.702623 4_3:+61373538 None:intergenic
CCCAGGCAATTCTACCACTG+TGG 0.714085 4_3:+61375532 None:intergenic
GGGAGGAAAATTAGCCACAG+TGG 0.714859 4_3:-61375546 Msa0653370:CDS
GCAAGGATAAGGTCAAACCA+AGG 0.728909 4_3:+61377048 None:intergenic
CCACTGAATGGAAAATCCCG+GGG 0.744139 4_3:-61374532 Msa0653370:CDS
TGAAGAGGACAATGACATTG+CGG 0.748182 4_3:-61377409 Msa0653370:CDS
AAGAATACTGTGGATCTACG+AGG 0.748281 4_3:-61374448 Msa0653370:CDS
GGTTCAAAATGAGTGACACG+AGG 0.753470 4_3:+61374289 None:intergenic
CCAACTTATAGGGTTCTCTG+GGG 0.797932 4_3:-61376556 Msa0653370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAAGATAAACTTTAAAA+GGG + chr4_3:61376202-61376221 None:intergenic 10.0%
!!! AATTTAAGATAAACTTTAAA+AGG + chr4_3:61376203-61376222 None:intergenic 10.0%
!! ATATAAATAAAAGAAGTTAT+TGG - chr4_3:61377297-61377316 Msa0653370:CDS 10.0%
!!! AATTTAGAATTGATATATTT+TGG - chr4_3:61377397-61377416 Msa0653370:CDS 10.0%
!!! TTTTATTTATTTATGAACAA+AGG + chr4_3:61379315-61379334 None:intergenic 10.0%
!! AAATACCTTTCAATAAAATT+TGG + chr4_3:61377333-61377352 None:intergenic 15.0%
!!! AAGGTATTTTATATTTAATC+TGG - chr4_3:61377344-61377363 Msa0653370:CDS 15.0%
!!! TTACTATTTTAGTAAGAATT+GGG - chr4_3:61377514-61377533 Msa0653370:CDS 15.0%
!!! AATTTTGTCTAAATCAAATT+AGG + chr4_3:61377731-61377750 None:intergenic 15.0%
!! AAAGAATGTTCAAAAAATAA+AGG + chr4_3:61379252-61379271 None:intergenic 15.0%
!! AAATAAAAGGAAACAGTTTA+TGG - chr4_3:61373804-61373823 Msa0653370:three_prime_UTR 20.0%
!! AATAAAAGGAAACAGTTTAT+GGG - chr4_3:61373805-61373824 Msa0653370:three_prime_UTR 20.0%
!!! TTTTACTTTGGATTTGTAAA+AGG + chr4_3:61374359-61374378 None:intergenic 20.0%
!! CAAAATTGTAATTTCCTAAT+GGG - chr4_3:61374446-61374465 Msa0653370:CDS 20.0%
!! ATCAGAGATAAAATATTTGT+TGG - chr4_3:61374871-61374890 Msa0653370:intron 20.0%
!! ATATTTAAATTAACAGCTCT+TGG + chr4_3:61376353-61376372 None:intergenic 20.0%
!! CTTTAATTATTGAATTGAGT+TGG + chr4_3:61376719-61376738 None:intergenic 20.0%
!! TTGCAAAATAACTTTCTTAA+TGG + chr4_3:61377125-61377144 None:intergenic 20.0%
!!! ATTATCTAAAATATTCATCG+TGG - chr4_3:61377263-61377282 Msa0653370:CDS 20.0%
!!! GAAATCCAAATTTTATTGAA+AGG - chr4_3:61377325-61377344 Msa0653370:CDS 20.0%
!!! CATTTTTTCTATTGAAGTAA+TGG - chr4_3:61377367-61377386 Msa0653370:CDS 20.0%
!!! GTTACTATTTTAGTAAGAAT+TGG - chr4_3:61377513-61377532 Msa0653370:CDS 20.0%
!!! TACTATTTTAGTAAGAATTG+GGG - chr4_3:61377515-61377534 Msa0653370:CDS 20.0%
!!! AAAAAGTATCAACAAAACAA+AGG + chr4_3:61378432-61378451 None:intergenic 20.0%
!!! TGTTTTGTTGATACTTTTTA+TGG - chr4_3:61378433-61378452 Msa0653370:intron 20.0%
!!! ATTTTTAGAAGAGTAATAGT+GGG + chr4_3:61378576-61378595 None:intergenic 20.0%
!!! TATTTTTAGAAGAGTAATAG+TGG + chr4_3:61378577-61378596 None:intergenic 20.0%
!! TCAATAGTTTAAGACATGTT+TGG - chr4_3:61373634-61373653 Msa0653370:three_prime_UTR 25.0%
! TTTCAGACATTTCTAATTGA+TGG - chr4_3:61373919-61373938 Msa0653370:three_prime_UTR 25.0%
!! GTATTTTTCTTGACAAAGTT+CGG - chr4_3:61374238-61374257 Msa0653370:exon 25.0%
!! ATTTTTGCGAACTTTTACTT+TGG + chr4_3:61374371-61374390 None:intergenic 25.0%
!! TGATGCAATTGTTTTCAATT+AGG - chr4_3:61374399-61374418 Msa0653370:CDS 25.0%
!! ATTTTGCAGTATTTCAAGAA+GGG + chr4_3:61374432-61374451 None:intergenic 25.0%
!! AATTTTGCAGTATTTCAAGA+AGG + chr4_3:61374433-61374452 None:intergenic 25.0%
! GCAAAATTGTAATTTCCTAA+TGG - chr4_3:61374445-61374464 Msa0653370:CDS 25.0%
!!! AAGTATCGTCTCAAATTTTT+CGG - chr4_3:61374600-61374619 Msa0653370:intron 25.0%
! TTCAAATCTATTGCTTCTTT+CGG + chr4_3:61374764-61374783 None:intergenic 25.0%
! TTTGTTGGATAAAATTCTTG+AGG - chr4_3:61374886-61374905 Msa0653370:intron 25.0%
! GATTTAACGGTAAATATTGA+GGG - chr4_3:61375040-61375059 Msa0653370:intron 25.0%
! AAAAAAGTTCAGATATTACC+TGG + chr4_3:61375405-61375424 None:intergenic 25.0%
!! AAAATCTCTCAACTTTTAGT+GGG - chr4_3:61375587-61375606 Msa0653370:CDS 25.0%
! ATAATGATTGTCATACTGTA+TGG + chr4_3:61376176-61376195 None:intergenic 25.0%
!! TAACGGCATTATGAAAATTT+TGG + chr4_3:61376392-61376411 None:intergenic 25.0%
! GAAAAGCAACTAAAAGATTT+GGG - chr4_3:61376687-61376706 Msa0653370:CDS 25.0%
! ATCCAAAAAACTCTATGTTT+GGG + chr4_3:61377426-61377445 None:intergenic 25.0%
! TATCCAAAAAACTCTATGTT+TGG + chr4_3:61377427-61377446 None:intergenic 25.0%
!! TTTTTGGATATATCCAATAG+CGG - chr4_3:61377437-61377456 Msa0653370:CDS 25.0%
! AAATAGTAACAAATACTCTC+CGG + chr4_3:61377503-61377522 None:intergenic 25.0%
! GTTGTTCTATCATGTAATTT+GGG - chr4_3:61377559-61377578 Msa0653370:CDS 25.0%
! GGTATTTATTACAGAAAAAC+AGG + chr4_3:61377594-61377613 None:intergenic 25.0%
! CAATTTCCAAATATGATGTT+AGG + chr4_3:61377622-61377641 None:intergenic 25.0%
! TTCAGATCATCCTATAATAT+AGG - chr4_3:61377646-61377665 Msa0653370:CDS 25.0%
! ATTCAATGTGCCTATATTAT+AGG + chr4_3:61377659-61377678 None:intergenic 25.0%
!!! AATCTGTCTCCTTTTAAAAT+TGG - chr4_3:61377697-61377716 Msa0653370:CDS 25.0%
!! GTTAAGAAGCCAATTTTAAA+AGG + chr4_3:61377709-61377728 None:intergenic 25.0%
! AGCAATGGTGATATTTATTA+TGG - chr4_3:61377922-61377941 Msa0653370:CDS 25.0%
! ATTACAAAGAGAACTGAATA+TGG + chr4_3:61378045-61378064 None:intergenic 25.0%
!! ATCAATCAAGTGACTAATTT+TGG - chr4_3:61378287-61378306 Msa0653370:intron 25.0%
!! ACACTTGTTGGTATAATTAA+AGG - chr4_3:61378335-61378354 Msa0653370:intron 25.0%
! GTATATATAAATGAGGAAAG+AGG + chr4_3:61378647-61378666 None:intergenic 25.0%
! TGAATGGGTATATATAAATG+AGG + chr4_3:61378654-61378673 None:intergenic 25.0%
! ATATACCCATTCAATTTCTT+TGG - chr4_3:61378661-61378680 Msa0653370:intron 25.0%
! ATAGACCAAAGAAATTGAAT+GGG + chr4_3:61378669-61378688 None:intergenic 25.0%
! AATAGACCAAAGAAATTGAA+TGG + chr4_3:61378670-61378689 None:intergenic 25.0%
! GTTTGATAGTTTGAAACACT+TGG - chr4_3:61373558-61373577 Msa0653370:three_prime_UTR 30.0%
ACTTATTTGAGCTAATCTAC+CGG + chr4_3:61373948-61373967 None:intergenic 30.0%
ACTATTACTTAGCGTATGTT+TGG + chr4_3:61373975-61373994 None:intergenic 30.0%
AGAAATTCTCTAAGCAATCA+AGG + chr4_3:61374039-61374058 None:intergenic 30.0%
TTGCTTAGAGAATTTCTGTA+TGG - chr4_3:61374042-61374061 Msa0653370:three_prime_UTR 30.0%
! ATCAACGTTTTTGATGTCTA+TGG - chr4_3:61374107-61374126 Msa0653370:three_prime_UTR 30.0%
! TCAACGTTTTTGATGTCTAT+GGG - chr4_3:61374108-61374127 Msa0653370:three_prime_UTR 30.0%
!!! CACTCTTTTAAGACCTTATT+GGG + chr4_3:61374291-61374310 None:intergenic 30.0%
!!! ACACTCTTTTAAGACCTTAT+TGG + chr4_3:61374292-61374311 None:intergenic 30.0%
! TTTTGCAGTATTTCAAGAAG+GGG + chr4_3:61374431-61374450 None:intergenic 30.0%
! TTGCATAGATTGCAATCTTT+TGG - chr4_3:61374490-61374509 Msa0653370:CDS 30.0%
TCATTAGATCAGAACGAAAA+AGG - chr4_3:61374546-61374565 Msa0653370:intron 30.0%
AAAAAGGAACATAGAAATCC+TGG - chr4_3:61374562-61374581 Msa0653370:intron 30.0%
! AGTATCGTCTCAAATTTTTC+GGG - chr4_3:61374601-61374620 Msa0653370:intron 30.0%
AGCAATAGATTTGAACAACA+TGG - chr4_3:61374769-61374788 Msa0653370:intron 30.0%
ATTTGAACAACATGGAAGTT+AGG - chr4_3:61374777-61374796 Msa0653370:intron 30.0%
! GTATGTCCAATTTTCAGTTT+AGG - chr4_3:61374956-61374975 Msa0653370:intron 30.0%
! AGAGTACCTAAACTGAAAAT+TGG + chr4_3:61374965-61374984 None:intergenic 30.0%
! ATTTTCAGTTTAGGTACTCT+TGG - chr4_3:61374965-61374984 Msa0653370:intron 30.0%
CGATTTAACGGTAAATATTG+AGG - chr4_3:61375039-61375058 Msa0653370:intron 30.0%
TTTCAGATAATGTCACACTA+AGG - chr4_3:61375104-61375123 Msa0653370:intron 30.0%
!!! GATCTAATTTTGAAGTCAAC+TGG + chr4_3:61375214-61375233 None:intergenic 30.0%
! GTTGACTTCAAAATTAGATC+TGG - chr4_3:61375214-61375233 Msa0653370:intron 30.0%
! AGTTGAGAGATTTTGTTCAA+GGG + chr4_3:61375581-61375600 None:intergenic 30.0%
! AAGTTGAGAGATTTTGTTCA+AGG + chr4_3:61375582-61375601 None:intergenic 30.0%
! CAAAATCTCTCAACTTTTAG+TGG - chr4_3:61375586-61375605 Msa0653370:CDS 30.0%
CTTGTTCTCATTGATGAAAT+TGG - chr4_3:61375658-61375677 Msa0653370:CDS 30.0%
! ATCTAAGTACTTTGAAGGAA+AGG - chr4_3:61375782-61375801 Msa0653370:CDS 30.0%
! TCTAAGTACTTTGAAGGAAA+GGG - chr4_3:61375783-61375802 Msa0653370:CDS 30.0%
CATTACAGGAGGAAAAAAAT+CGG - chr4_3:61376016-61376035 Msa0653370:intron 30.0%
! CTTTATTAGTTTCTTCTCCT+TGG - chr4_3:61376142-61376161 Msa0653370:intron 30.0%
ATTGATAGATATCCAATCCT+CGG - chr4_3:61376321-61376340 Msa0653370:intron 30.0%
! ATGAAAATTTTGGATGGAAG+AGG + chr4_3:61376382-61376401 None:intergenic 30.0%
! GGCATTATGAAAATTTTGGA+TGG + chr4_3:61376388-61376407 None:intergenic 30.0%
! TTTCATAATGCCGTTATTTC+TGG - chr4_3:61376396-61376415 Msa0653370:CDS 30.0%
!! TTCATAATGCCGTTATTTCT+GGG - chr4_3:61376397-61376416 Msa0653370:CDS 30.0%
GATCTTTGCAAAAGAAGAAA+AGG + chr4_3:61376547-61376566 None:intergenic 30.0%
! TTCTTTTGCAAAGATCCAAA+GGG - chr4_3:61376551-61376570 Msa0653370:CDS 30.0%
CGAAAAGCAACTAAAAGATT+TGG - chr4_3:61376686-61376705 Msa0653370:CDS 30.0%
ACATCATATACTCCACAATT+TGG - chr4_3:61376819-61376838 Msa0653370:CDS 30.0%
TCCAAAAAACTCTATGTTTG+GGG + chr4_3:61377425-61377444 None:intergenic 30.0%
AATTACATGATAGAACAACG+AGG + chr4_3:61377558-61377577 None:intergenic 30.0%
CGTTGTTCTATCATGTAATT+TGG - chr4_3:61377558-61377577 Msa0653370:CDS 30.0%
TGATATTTATTATGGTCCAG+CGG - chr4_3:61377930-61377949 Msa0653370:CDS 30.0%
TCAGTTCTCTTTGTAATACA+TGG - chr4_3:61378048-61378067 Msa0653370:intron 30.0%
CAGTTCTCTTTGTAATACAT+GGG - chr4_3:61378049-61378068 Msa0653370:intron 30.0%
ACAGTACATCCATAATTCAT+TGG + chr4_3:61378156-61378175 None:intergenic 30.0%
!!! ATTTGCCAAACTTTTAGCTT+AGG - chr4_3:61378470-61378489 Msa0653370:intron 30.0%
!!! TTTGCCAAACTTTTAGCTTA+GGG - chr4_3:61378471-61378490 Msa0653370:intron 30.0%
TAATGAGTAGGCAAAAACAA+CGG + chr4_3:61378518-61378537 None:intergenic 30.0%
ATTTGGGCTATTAATAGGAA+GGG + chr4_3:61378547-61378566 None:intergenic 30.0%
!! ATCTGATTTGGGCTATTAAT+AGG + chr4_3:61378552-61378571 None:intergenic 30.0%
! TAATAGTGGGAATCTGATTT+GGG + chr4_3:61378563-61378582 None:intergenic 30.0%
!! ACTTTTCTTCTCATTTTTGC+AGG - chr4_3:61378699-61378718 Msa0653370:intron 30.0%
!! CTTTTCTTCTCATTTTTGCA+GGG - chr4_3:61378700-61378719 Msa0653370:intron 30.0%
!! AAGTACAATGCATCGATTAT+TGG - chr4_3:61379115-61379134 Msa0653370:CDS 30.0%
CTTTGCTAGTAATTAGTTAC+TGG - chr4_3:61379268-61379287 Msa0653370:exon 30.0%
TTTACTACAACCTTCTGTTG+TGG + chr4_3:61373100-61373119 None:intergenic 35.0%
CAAACTATCAAACAATTCCC+TGG + chr4_3:61373551-61373570 None:intergenic 35.0%
CTGTATCTAATCATTCACAC+AGG - chr4_3:61373584-61373603 Msa0653370:three_prime_UTR 35.0%
TTTATTTCCATCATCTCTCG+AGG + chr4_3:61373791-61373810 None:intergenic 35.0%
!! CGAGAGATGATGGAAATAAA+AGG - chr4_3:61373791-61373810 Msa0653370:intron 35.0%
! GAAAGTGATGGAAACTGATT+GGG + chr4_3:61373866-61373885 None:intergenic 35.0%
! TGAAAGTGATGGAAACTGAT+TGG + chr4_3:61373867-61373886 None:intergenic 35.0%
!! ATAGCTCTATTGCTATTTCG+CGG + chr4_3:61373900-61373919 None:intergenic 35.0%
! CATTTCTAATTGATGGCTAC+CGG - chr4_3:61373926-61373945 Msa0653370:three_prime_UTR 35.0%
! AGCAGCTTCTTTTATGCATT+TGG - chr4_3:61374205-61374224 Msa0653370:three_prime_UTR 35.0%
! GCAGCTTCTTTTATGCATTT+GGG - chr4_3:61374206-61374225 Msa0653370:three_prime_UTR 35.0%
! TTCTTTTATGCATTTGGGCT+AGG - chr4_3:61374211-61374230 Msa0653370:three_prime_UTR 35.0%
CATAATGTCATGTCCCAATA+AGG - chr4_3:61374275-61374294 Msa0653370:CDS 35.0%
! TCTAATTGCACTTGTGCTTT+TGG - chr4_3:61374321-61374340 Msa0653370:CDS 35.0%
! CTAATTGCACTTGTGCTTTT+GGG - chr4_3:61374322-61374341 Msa0653370:CDS 35.0%
!! TTGTAATTTCCTAATGGGCT+TGG - chr4_3:61374451-61374470 Msa0653370:CDS 35.0%
AATCCTGGACTCTTTATTGA+AGG - chr4_3:61374577-61374596 Msa0653370:intron 35.0%
GATCGACGCTTAGTAATAAA+TGG + chr4_3:61374644-61374663 None:intergenic 35.0%
TATAGGTATTTGCTTCCAGA+AGG - chr4_3:61374692-61374711 Msa0653370:intron 35.0%
ACTCAAAATTGCTCTTTCCT+CGG + chr4_3:61374822-61374841 None:intergenic 35.0%
TCTGGAAATTCTTCTGAGTT+GGG - chr4_3:61375127-61375146 Msa0653370:intron 35.0%
! AATTCTTCTGAGTTGGGTAT+TGG - chr4_3:61375133-61375152 Msa0653370:intron 35.0%
! AATTAGATCTGGAACTAGAG+TGG - chr4_3:61375225-61375244 Msa0653370:intron 35.0%
AACTGCTTCAATGAAAACGT+TGG - chr4_3:61375279-61375298 Msa0653370:intron 35.0%
ACTGCTTCAATGAAAACGTT+GGG - chr4_3:61375280-61375299 Msa0653370:intron 35.0%
!!! AGGAAGTTTTGGACTTTTCT+TGG + chr4_3:61375347-61375366 None:intergenic 35.0%
AGAAAAGTCCAAAACTTCCT+TGG - chr4_3:61375347-61375366 Msa0653370:intron 35.0%
!! TATCCGTAAGTTTTTGGAAG+TGG - chr4_3:61375621-61375640 Msa0653370:CDS 35.0%
!! GAGAACAAGTGATTGTTTTG+AGG + chr4_3:61375647-61375666 None:intergenic 35.0%
CTCATTGATGAAATTGGTAG+TGG - chr4_3:61375664-61375683 Msa0653370:CDS 35.0%
ACGCAGATATTGTAAGATAC+TGG + chr4_3:61375722-61375741 None:intergenic 35.0%
ACTTAGATCAGCATAATGAG+TGG + chr4_3:61375770-61375789 None:intergenic 35.0%
TGCTGATCTAAGTACTTTGA+AGG - chr4_3:61375777-61375796 Msa0653370:CDS 35.0%
!!! ATGTTTTGAAAATGCCGCAA+TGG - chr4_3:61375810-61375829 Msa0653370:CDS 35.0%
TTCCAGTGAAAATTCCATTG+CGG + chr4_3:61375827-61375846 None:intergenic 35.0%
AAACCTTGCAACCAACTTAT+AGG - chr4_3:61375845-61375864 Msa0653370:CDS 35.0%
AACCTTGCAACCAACTTATA+GGG - chr4_3:61375846-61375865 Msa0653370:CDS 35.0%
TTAAGCATAGCGCAATCTAT+TGG - chr4_3:61375901-61375920 Msa0653370:CDS 35.0%
TAATTGACCATGCACAAAAG+TGG - chr4_3:61375938-61375957 Msa0653370:CDS 35.0%
AATTGACCATGCACAAAAGT+GGG - chr4_3:61375939-61375958 Msa0653370:CDS 35.0%
AATGCTCTATCAGTCATTAC+AGG - chr4_3:61376002-61376021 Msa0653370:intron 35.0%
GGAGGAAAAAAATCGGTTAA+AGG - chr4_3:61376023-61376042 Msa0653370:intron 35.0%
GTTCACAATTTCTGCATGAA+TGG + chr4_3:61376070-61376089 None:intergenic 35.0%
! TTGTCATACTGTATGGACTA+TGG + chr4_3:61376169-61376188 None:intergenic 35.0%
ACCAGAAAATCAAAGTGTGA+TGG - chr4_3:61376256-61376275 Msa0653370:intron 35.0%
!! TCCATCACACTTTGATTTTC+TGG + chr4_3:61376260-61376279 None:intergenic 35.0%
GGATTGGATATCTATCAATG+AGG + chr4_3:61376320-61376339 None:intergenic 35.0%
TTGATAGATATCCAATCCTC+GGG - chr4_3:61376322-61376341 Msa0653370:intron 35.0%
!! TCATAATGCCGTTATTTCTG+GGG - chr4_3:61376398-61376417 Msa0653370:CDS 35.0%
! ACCATTTTCCCCAGAAATAA+CGG + chr4_3:61376409-61376428 None:intergenic 35.0%
GAAGAAAAGGAAAAGAGTGA+AGG + chr4_3:61376534-61376553 None:intergenic 35.0%
! CTTCTTTTGCAAAGATCCAA+AGG - chr4_3:61376550-61376569 Msa0653370:CDS 35.0%
AGAGGATGCAAAATCTCAAA+TGG - chr4_3:61376644-61376663 Msa0653370:CDS 35.0%
! AGTATGAGCTTTTACAATGG+AGG + chr4_3:61376760-61376779 None:intergenic 35.0%
!! AGGAGTATGAGCTTTTACAA+TGG + chr4_3:61376763-61376782 None:intergenic 35.0%
GAAACAATCTTGGTACAGTA+TGG - chr4_3:61376909-61376928 Msa0653370:intron 35.0%
!! TTATTTTGCAAGCAGTGAGT+TGG - chr4_3:61377134-61377153 Msa0653370:CDS 35.0%
! TATTTTGCAAGCAGTGAGTT+GGG - chr4_3:61377135-61377154 Msa0653370:CDS 35.0%
GGAGTATGTAAATAGCTAGA+GGG - chr4_3:61377462-61377481 Msa0653370:CDS 35.0%
GAGTATGTAAATAGCTAGAG+GGG - chr4_3:61377463-61377482 Msa0653370:CDS 35.0%
CAAATATGATGTTAGGAAGC+TGG + chr4_3:61377615-61377634 None:intergenic 35.0%
CAGCTTCCTAACATCATATT+TGG - chr4_3:61377613-61377632 Msa0653370:CDS 35.0%
CTAATGTAGAAACCACTGAA+TGG - chr4_3:61377868-61377887 Msa0653370:CDS 35.0%
GCAAACATCTAAGAATACTG+TGG - chr4_3:61377954-61377973 Msa0653370:CDS 35.0%
TCTCTTTGTAATACATGGGA+TGG - chr4_3:61378053-61378072 Msa0653370:intron 35.0%
CTCTTTGTAATACATGGGAT+GGG - chr4_3:61378054-61378073 Msa0653370:intron 35.0%
CCATAATTCATTGGACTTTC+TGG + chr4_3:61378147-61378166 None:intergenic 35.0%
CCAGAAAGTCCAATGAATTA+TGG - chr4_3:61378144-61378163 Msa0653370:intron 35.0%
TTATTGCAATAGGGGAATGA+GGG + chr4_3:61378201-61378220 None:intergenic 35.0%
! CTGTTAGCTTATTGCAATAG+GGG + chr4_3:61378209-61378228 None:intergenic 35.0%
! GCTGTTAGCTTATTGCAATA+GGG + chr4_3:61378210-61378229 None:intergenic 35.0%
! TGCTGTTAGCTTATTGCAAT+AGG + chr4_3:61378211-61378230 None:intergenic 35.0%
TCTGCTTGCTTATTCTTTAC+AGG - chr4_3:61378261-61378280 Msa0653370:intron 35.0%
ACATACGTAAACACACTTGT+TGG - chr4_3:61378323-61378342 Msa0653370:intron 35.0%
ATCTCCCTAAGCTAAAAGTT+TGG + chr4_3:61378478-61378497 None:intergenic 35.0%
GGAGATCATAACAGAGAATA+TGG - chr4_3:61378492-61378511 Msa0653370:intron 35.0%
GATTTGGGCTATTAATAGGA+AGG + chr4_3:61378548-61378567 None:intergenic 35.0%
! GTAATAGTGGGAATCTGATT+TGG + chr4_3:61378564-61378583 None:intergenic 35.0%
ACAAGTAATACTTCCTCATG+CGG - chr4_3:61378741-61378760 Msa0653370:intron 35.0%
AAAACCCAATCCACAACAGA+AGG - chr4_3:61373087-61373106 Msa0653370:three_prime_UTR 40.0%
ACAACCTTCTGTTGTGGATT+GGG + chr4_3:61373094-61373113 None:intergenic 40.0%
TACAACCTTCTGTTGTGGAT+TGG + chr4_3:61373095-61373114 None:intergenic 40.0%
!!! TTCGAGAGTTTTGAGGCTAT+CGG + chr4_3:61373263-61373282 None:intergenic 40.0%
ATAGCCTCAAAACTCTCGAA+TGG - chr4_3:61373263-61373282 Msa0653370:three_prime_UTR 40.0%
! AGTTCCATTCGAGAGTTTTG+AGG + chr4_3:61373270-61373289 None:intergenic 40.0%
AGCATTCACTTCCACTTCAA+TGG - chr4_3:61373309-61373328 Msa0653370:three_prime_UTR 40.0%
GCATTCACTTCCACTTCAAT+GGG - chr4_3:61373310-61373329 Msa0653370:three_prime_UTR 40.0%
! AGGTTTGATCGAGAAGCTTT+TGG + chr4_3:61373390-61373409 None:intergenic 40.0%
! TTGTTGTTGAGGAATGAGTC+TGG + chr4_3:61373419-61373438 None:intergenic 40.0%
! GAAAAGTCGAGTTGTTGTTG+AGG + chr4_3:61373430-61373449 None:intergenic 40.0%
! CAACAACAACTCGACTTTTC+TGG - chr4_3:61373430-61373449 Msa0653370:three_prime_UTR 40.0%
GGGAATAGTCAACAATCTAC+CGG + chr4_3:61373494-61373513 None:intergenic 40.0%
CATTCACACAGGTTTGAACT+TGG - chr4_3:61373595-61373614 Msa0653370:three_prime_UTR 40.0%
GGGCAATCTAATGAAAGTGA+TGG + chr4_3:61373878-61373897 None:intergenic 40.0%
!! TAGCTCTATTGCTATTTCGC+GGG + chr4_3:61373899-61373918 None:intergenic 40.0%
GCAATCAAGGAATCATGCAT+TGG + chr4_3:61374026-61374045 None:intergenic 40.0%
! GTTGATGTCGTTTAGAACCT+TGG + chr4_3:61374093-61374112 None:intergenic 40.0%
GTTCTGATCTAATGATCTCC+AGG + chr4_3:61374541-61374560 None:intergenic 40.0%
CTTCCTTCAATAAAGAGTCC+AGG + chr4_3:61374583-61374602 None:intergenic 40.0%
GCATTCAGAACTATACCTTC+TGG + chr4_3:61374710-61374729 None:intergenic 40.0%
!! CTCTGGAGCAACATACTTTA+TGG - chr4_3:61374736-61374755 Msa0653370:intron 40.0%
! TAGGCTTTCAAACTCTGAAG+CGG - chr4_3:61374796-61374815 Msa0653370:intron 40.0%
CCTATGCTCAATGGATGAAT+GGG - chr4_3:61374933-61374952 Msa0653370:intron 40.0%
CTATGCTCAATGGATGAATG+GGG - chr4_3:61374934-61374953 Msa0653370:intron 40.0%
TTCAGTTTAGGTACTCTTGG+AGG - chr4_3:61374968-61374987 Msa0653370:intron 40.0%
AGGTTGCAATTCTGTTGAAG+AGG - chr4_3:61374988-61375007 Msa0653370:intron 40.0%
TGAAGAGGACAATGACATTG+CGG - chr4_3:61375003-61375022 Msa0653370:intron 40.0%
TGTGCAGGATGACGATTTAA+CGG - chr4_3:61375027-61375046 Msa0653370:intron 40.0%
! CGGTAAATATTGAGGGTATG+CGG - chr4_3:61375047-61375066 Msa0653370:intron 40.0%
GATAATGTCACACTAAGGTC+TGG - chr4_3:61375109-61375128 Msa0653370:intron 40.0%
GTCTGGAAATTCTTCTGAGT+TGG - chr4_3:61375126-61375145 Msa0653370:intron 40.0%
!! TCTGAGTTGGGTATTGGAAA+TGG - chr4_3:61375139-61375158 Msa0653370:intron 40.0%
!! GGGTATTGGAAATGGAACAA+TGG - chr4_3:61375147-61375166 Msa0653370:intron 40.0%
!!! TTTTGAAGTCAACTGGCACA+GGG + chr4_3:61375207-61375226 None:intergenic 40.0%
!!! ATTTTGAAGTCAACTGGCAC+AGG + chr4_3:61375208-61375227 None:intergenic 40.0%
! CTTTTGACATAAGTGATGCC+AGG + chr4_3:61375306-61375325 None:intergenic 40.0%
GCATCACTTATGTCAAAAGC+CGG - chr4_3:61375307-61375326 Msa0653370:intron 40.0%
!!! AGTTTTGGACTTTTCTTGGC+AGG + chr4_3:61375343-61375362 None:intergenic 40.0%
! AGGTCAAACCAAGGAAGTTT+TGG + chr4_3:61375358-61375377 None:intergenic 40.0%
! TTGGTTTGACCTTATCCTTG+CGG - chr4_3:61375366-61375385 Msa0653370:intron 40.0%
!! AAGGGACTGCAATTTTGAAG+GGG + chr4_3:61375563-61375582 None:intergenic 40.0%
! CAAGGGACTGCAATTTTGAA+GGG + chr4_3:61375564-61375583 None:intergenic 40.0%
! TCAAGGGACTGCAATTTTGA+AGG + chr4_3:61375565-61375584 None:intergenic 40.0%
! CTCACGTATCCGTAAGTTTT+TGG - chr4_3:61375615-61375634 Msa0653370:CDS 40.0%
AGGCCACTTCCAAAAACTTA+CGG + chr4_3:61375627-61375646 None:intergenic 40.0%
TCTGCGTGAACATGTTAACT+TGG - chr4_3:61375735-61375754 Msa0653370:CDS 40.0%
!! AACCCTATAAGTTGGTTGCA+AGG + chr4_3:61375851-61375870 None:intergenic 40.0%
AACCAACTTATAGGGTTCTC+TGG - chr4_3:61375854-61375873 Msa0653370:CDS 40.0%
ACCAACTTATAGGGTTCTCT+GGG - chr4_3:61375855-61375874 Msa0653370:CDS 40.0%
AATTGTGAACGTGTACTCTG+AGG - chr4_3:61376080-61376099 Msa0653370:intron 40.0%
!! AAGTGTGATGGATGTTGTGA+AGG - chr4_3:61376268-61376287 Msa0653370:intron 40.0%
GGATATCTATCAATGAGGCA+CGG + chr4_3:61376315-61376334 None:intergenic 40.0%
TGATAGATATCCAATCCTCG+GGG - chr4_3:61376323-61376342 Msa0653370:intron 40.0%
GACATTCAATTACAGACTGC+AGG + chr4_3:61376458-61376477 None:intergenic 40.0%
CTCATTGCTTTGCACTTTCT+TGG - chr4_3:61376494-61376513 Msa0653370:CDS 40.0%
AAGGAAAAGAGTGAAGGAGA+TGG + chr4_3:61376528-61376547 None:intergenic 40.0%
! TTTTGCAAAGATCCAAAGGG+AGG - chr4_3:61376554-61376573 Msa0653370:CDS 40.0%
TAGACGTGAAACGATGCTTA+TGG - chr4_3:61376590-61376609 Msa0653370:CDS 40.0%
TGAAACGATGCTTATGGCAA+AGG - chr4_3:61376596-61376615 Msa0653370:CDS 40.0%
TTGCATCCTCTAACTCTTGT+TGG + chr4_3:61376635-61376654 None:intergenic 40.0%
AAGATTGTTTCATCATCCCC+AGG + chr4_3:61376900-61376919 None:intergenic 40.0%
TGGGGATGATGAAACAATCT+TGG - chr4_3:61376899-61376918 Msa0653370:intron 40.0%
! ACTCTGTTTTCTTCCTTGAC+AGG + chr4_3:61377091-61377110 None:intergenic 40.0%
TGTCAAGGAAGAAAACAGAG+TGG - chr4_3:61377090-61377109 Msa0653370:CDS 40.0%
TTGGGATAAGACAGTTAGAG+CGG - chr4_3:61377163-61377182 Msa0653370:CDS 40.0%
!!! GCCCCAAACATAGAGTTTTT+TGG - chr4_3:61377421-61377440 Msa0653370:CDS 40.0%
TTGGATATATCCAATAGCGG+AGG - chr4_3:61377440-61377459 Msa0653370:CDS 40.0%
! TGGATATATCCAATAGCGGA+GGG - chr4_3:61377441-61377460 Msa0653370:CDS 40.0%
! GGGAGTATGTAAATAGCTAG+AGG - chr4_3:61377461-61377480 Msa0653370:CDS 40.0%
TTAGTAAGAATTGGGGCATG+TGG - chr4_3:61377522-61377541 Msa0653370:CDS 40.0%
ACATTCAAGACCCAACAGAT+TGG + chr4_3:61377762-61377781 None:intergenic 40.0%
TCTGTACACTAACGCTTTGA+AGG - chr4_3:61377793-61377812 Msa0653370:CDS 40.0%
AACCACTGAATGGAAAATCC+CGG - chr4_3:61377878-61377897 Msa0653370:CDS 40.0%
TGTTCATCTCTAAGTTACCC+CGG + chr4_3:61377900-61377919 None:intergenic 40.0%
TTAGAGATGAACAGCAGCAA+TGG - chr4_3:61377907-61377926 Msa0653370:CDS 40.0%
AAGAATACTGTGGATCTACG+AGG - chr4_3:61377964-61377983 Msa0653370:CDS 40.0%
CTTATTGCAATAGGGGAATG+AGG + chr4_3:61378202-61378221 None:intergenic 40.0%
AAAAATACCCTCGCCAAAAG+CGG + chr4_3:61378242-61378261 None:intergenic 40.0%
GCTTGCTTATTCTTTACAGG+AGG - chr4_3:61378264-61378283 Msa0653370:intron 40.0%
TTTGCAGGGTGAAAAGATCA+AGG - chr4_3:61378714-61378733 Msa0653370:intron 40.0%
GCTCTTGACAGTTTCTTCAA+CGG + chr4_3:61378828-61378847 None:intergenic 40.0%
GAACAAGGTGGAACTTATCA+TGG + chr4_3:61378865-61378884 None:intergenic 40.0%
TATCAGTATGCACCAAAGAC+AGG + chr4_3:61379174-61379193 None:intergenic 40.0%
! TGTCTTTGGTGCATACTGAT+AGG - chr4_3:61379173-61379192 Msa0653370:CDS 40.0%
GCATACTGATAGGATAGCTA+AGG - chr4_3:61379183-61379202 Msa0653370:CDS 40.0%
! GTTTGTTGATGGGGATGAAG+AGG + chr4_3:61373174-61373193 None:intergenic 45.0%
!! GGATTGAGGGTTTGTTGATG+GGG + chr4_3:61373183-61373202 None:intergenic 45.0%
!! GGGATTGAGGGTTTGTTGAT+GGG + chr4_3:61373184-61373203 None:intergenic 45.0%
!! AGGGATTGAGGGTTTGTTGA+TGG + chr4_3:61373185-61373204 None:intergenic 45.0%
AAGGTTTGAAGGAGAAGCGA+GGG + chr4_3:61373204-61373223 None:intergenic 45.0%
GTAGCAGAAGCAAGGTTTGA+AGG + chr4_3:61373215-61373234 None:intergenic 45.0%
!!! GAGTTTTGAGGCTATCGGAT+TGG + chr4_3:61373258-61373277 None:intergenic 45.0%
TGCTGAGAGTTGCTTGCATA+TGG + chr4_3:61373293-61373312 None:intergenic 45.0%
!! AGAAGCTTTTGGCTGTCTGT+TGG + chr4_3:61373379-61373398 None:intergenic 45.0%
!! ATTCTCTCCGTTGCTGTTTC+CGG - chr4_3:61373472-61373491 Msa0653370:three_prime_UTR 45.0%
CAATCTACCGGAAACAGCAA+CGG + chr4_3:61373482-61373501 None:intergenic 45.0%
AAGCTATCCTCGAGAGATGA+TGG - chr4_3:61373781-61373800 Msa0653370:intron 45.0%
TGATGGAAACTGATTGGGAG+AGG + chr4_3:61373861-61373880 None:intergenic 45.0%
!! AGCTCTATTGCTATTTCGCG+GGG + chr4_3:61373898-61373917 None:intergenic 45.0%
TGATAGAGCAAGTGAAGACC+TGG - chr4_3:61374520-61374539 Msa0653370:CDS 45.0%
!!! TCGTCTCAAATTTTTCGGGC+TGG - chr4_3:61374605-61374624 Msa0653370:intron 45.0%
!!! CGTCTCAAATTTTTCGGGCT+GGG - chr4_3:61374606-61374625 Msa0653370:intron 45.0%
!!! GTCTCAAATTTTTCGGGCTG+GGG - chr4_3:61374607-61374626 Msa0653370:intron 45.0%
!!! TCTCAAATTTTTCGGGCTGG+GGG - chr4_3:61374608-61374627 Msa0653370:intron 45.0%
GCCTATGCTCAATGGATGAA+TGG - chr4_3:61374932-61374951 Msa0653370:intron 45.0%
CCCATTCATCCATTGAGCAT+AGG + chr4_3:61374936-61374955 None:intergenic 45.0%
!! TGTTTTCTAGAGACGACTCC+AGG + chr4_3:61375084-61375103 None:intergenic 45.0%
! TAGATCTGGAACTAGAGTGG+TGG - chr4_3:61375228-61375247 Msa0653370:intron 45.0%
GTCATCTCAGGACCTAATAC+TGG - chr4_3:61375250-61375269 Msa0653370:intron 45.0%
ATCTCAGGACCTAATACTGG+AGG - chr4_3:61375253-61375272 Msa0653370:intron 45.0%
TCTCAGGACCTAATACTGGA+GGG - chr4_3:61375254-61375273 Msa0653370:intron 45.0%
! GCAGTTTTCCCTCCAGTATT+AGG + chr4_3:61375265-61375284 None:intergenic 45.0%
TTCAATGAAAACGTTGGGCC+TGG - chr4_3:61375285-61375304 Msa0653370:intron 45.0%
GCAAGGATAAGGTCAAACCA+AGG + chr4_3:61375367-61375386 None:intergenic 45.0%
GACCTTATCCTTGCGGATAT+TGG - chr4_3:61375373-61375392 Msa0653370:intron 45.0%
CTCCAATATCCGCAAGGATA+AGG + chr4_3:61375378-61375397 None:intergenic 45.0%
AGTGGAACTGATCCTTCAGA+AGG - chr4_3:61375682-61375701 Msa0653370:CDS 45.0%
! TGCCGCAATGGAATTTTCAC+TGG - chr4_3:61375822-61375841 Msa0653370:CDS 45.0%
CCAACTTATAGGGTTCTCTG+GGG - chr4_3:61375856-61375875 Msa0653370:CDS 45.0%
GCTCTATCAGTCATTACAGG+AGG - chr4_3:61376005-61376024 Msa0653370:intron 45.0%
! ACTGTATGGACTATGGACCA+AGG + chr4_3:61376162-61376181 None:intergenic 45.0%
!! GCCGTTATTTCTGGGGAAAA+TGG - chr4_3:61376405-61376424 Msa0653370:CDS 45.0%
GAGTGAAGGAGATGGATAGA+CGG + chr4_3:61376520-61376539 None:intergenic 45.0%
GCATCGTTTCACGTCTATCA+AGG + chr4_3:61376587-61376606 None:intergenic 45.0%
TATGGCAAAGGAAGCTCAAC+AGG - chr4_3:61376608-61376627 Msa0653370:CDS 45.0%
ACAGGTCCAACAAGAGTTAG+AGG - chr4_3:61376626-61376645 Msa0653370:CDS 45.0%
AAAGCTCATACTCCTGCTGT+TGG - chr4_3:61376768-61376787 Msa0653370:CDS 45.0%
GTTGCAGGATTCTTTGCACT+TGG + chr4_3:61376981-61377000 None:intergenic 45.0%
! AACTAGTTCTCCCACTCATC+AGG - chr4_3:61376998-61377017 Msa0653370:intron 45.0%
! ACTAGTTCTCCCACTCATCA+GGG - chr4_3:61376999-61377018 Msa0653370:intron 45.0%
GATAAGACAGTTAGAGCGGA+AGG - chr4_3:61377167-61377186 Msa0653370:CDS 45.0%
TTACATACTCCCTCCGCTAT+TGG + chr4_3:61377453-61377472 None:intergenic 45.0%
AAATAGCTAGAGGGGTTGAG+AGG - chr4_3:61377471-61377490 Msa0653370:CDS 45.0%
AATAGCTAGAGGGGTTGAGA+GGG - chr4_3:61377472-61377491 Msa0653370:CDS 45.0%
ATTTGCACCTGCCAATCTGT+TGG - chr4_3:61377748-61377767 Msa0653370:CDS 45.0%
TTTGCACCTGCCAATCTGTT+GGG - chr4_3:61377749-61377768 Msa0653370:CDS 45.0%
ACCACTGAATGGAAAATCCC+GGG - chr4_3:61377879-61377898 Msa0653370:CDS 45.0%
GTTCATCTCTAAGTTACCCC+GGG + chr4_3:61377899-61377918 None:intergenic 45.0%
TTCTTAGATGTTTGCACCGC+TGG + chr4_3:61377949-61377968 None:intergenic 45.0%
TAATACATGGGATGGGCACT+GGG - chr4_3:61378061-61378080 Msa0653370:intron 45.0%
GGTTCAAAATGAGTGACACG+AGG + chr4_3:61378126-61378145 None:intergenic 45.0%
GCAATAAGCTAACAGCAGCT+TGG - chr4_3:61378214-61378233 Msa0653370:intron 45.0%
AAAATACCCTCGCCAAAAGC+GGG + chr4_3:61378241-61378260 None:intergenic 45.0%
GAAGGGTGAAGCTAATGAGT+AGG + chr4_3:61378530-61378549 None:intergenic 45.0%
TTCTCATTCACACACACCTC+CGG - chr4_3:61378609-61378628 Msa0653370:intron 45.0%
AAAGAGGAGAACAAACGCAC+CGG + chr4_3:61378631-61378650 None:intergenic 45.0%
TGAAGAAACTGTCAAGAGCG+TGG - chr4_3:61378829-61378848 Msa0653370:CDS 45.0%
AGGTGGAACTTATCATGGAC+AGG + chr4_3:61378860-61378879 None:intergenic 45.0%
! GTGGTGGTCTTGATTGGTAT+CGG + chr4_3:61378909-61378928 None:intergenic 45.0%
TTCTCCACTCGATGGAACAT+CGG + chr4_3:61379061-61379080 None:intergenic 45.0%
GTACTTCTCCTTGCAATACG+TGG + chr4_3:61379101-61379120 None:intergenic 45.0%
CACCAAAGACAGGTACGATT+AGG + chr4_3:61379164-61379183 None:intergenic 45.0%
AGGTTGCAGGTGAGTTGCAT+CGG + chr4_3:61373154-61373173 None:intergenic 50.0%
AAGGAGAAGCGAGGGATTGA+GGG + chr4_3:61373196-61373215 None:intergenic 50.0%
CAAGGTTTGAAGGAGAAGCG+AGG + chr4_3:61373205-61373224 None:intergenic 50.0%
TCGGTTGAGTAGCAGAAGCA+AGG + chr4_3:61373223-61373242 None:intergenic 50.0%
! GGATTGGACTGAGTTGGACT+CGG + chr4_3:61373242-61373261 None:intergenic 50.0%
! GCTATCGGATTGGACTGAGT+TGG + chr4_3:61373248-61373267 None:intergenic 50.0%
TTGAGGAATGAGTCTGGCAG+CGG + chr4_3:61373413-61373432 None:intergenic 50.0%
GACTATTCCCGAGCTTTGCA+CGG - chr4_3:61373504-61373523 Msa0653370:three_prime_UTR 50.0%
TCTTCGAACCGTGCAAAGCT+CGG + chr4_3:61373515-61373534 None:intergenic 50.0%
TTCGATAAGCTGTGCGACCA+AGG - chr4_3:61374073-61374092 Msa0653370:three_prime_UTR 50.0%
! CGTCGATCTAGAATGTGCGT+GGG - chr4_3:61374656-61374675 Msa0653370:intron 50.0%
TAGAATGTGCGTGGGCATCA+GGG - chr4_3:61374664-61374683 Msa0653370:intron 50.0%
CAAGAGCTGCCTATGCTCAA+TGG - chr4_3:61374924-61374943 Msa0653370:intron 50.0%
CAATGACATTGCGGTTGTGC+AGG - chr4_3:61375012-61375031 Msa0653370:intron 50.0%
TATGCGGCATCCATTACTCC+TGG - chr4_3:61375063-61375082 Msa0653370:intron 50.0%
AGAGACGACTCCAGGAGTAA+TGG + chr4_3:61375076-61375095 None:intergenic 50.0%
! GCTTCTAAAAGCGCGTCACA+AGG - chr4_3:61375169-61375188 Msa0653370:intron 50.0%
ACTAGAGTGGTGGTCATCTC+AGG - chr4_3:61375238-61375257 Msa0653370:intron 50.0%
GGTGATCTCCAATATCCGCA+AGG + chr4_3:61375384-61375403 None:intergenic 50.0%
TGCGGATATTGGAGATCACC+AGG - chr4_3:61375384-61375403 Msa0653370:intron 50.0%
AACTGATCCTTCAGAAGGCG+TGG - chr4_3:61375687-61375706 Msa0653370:CDS 50.0%
CCCCAGAGAACCCTATAAGT+TGG + chr4_3:61375859-61375878 None:intergenic 50.0%
! AGGGTTCTCTGGGGATGTAT+CGG - chr4_3:61375865-61375884 Msa0653370:CDS 50.0%
TGACCATGCACAAAAGTGGG+TGG - chr4_3:61375942-61375961 Msa0653370:CDS 50.0%
!! TCTCCACCCACTTTTGTGCA+TGG + chr4_3:61375948-61375967 None:intergenic 50.0%
AACCAGAACAGCAGCAAGAG+CGG - chr4_3:61375974-61375993 Msa0653370:intron 50.0%
! CGGACTTGCTCTCCAAATTG+TGG + chr4_3:61376834-61376853 None:intergenic 50.0%
CAAGTCCGTGTGAAGGGATT+GGG - chr4_3:61376846-61376865 Msa0653370:intron 50.0%
TTCCTCCCAATCCCTTCACA+CGG + chr4_3:61376854-61376873 None:intergenic 50.0%
GGGAGGAAAATTAGCCACAG+TGG - chr4_3:61376866-61376885 Msa0653370:intron 50.0%
CCACAGTGGTAGAATTGCCT+GGG - chr4_3:61376880-61376899 Msa0653370:intron 50.0%
CACAGTGGTAGAATTGCCTG+GGG - chr4_3:61376881-61376900 Msa0653370:intron 50.0%
GCAGGATTCTTTGCACTTGG+TGG + chr4_3:61376978-61376997 None:intergenic 50.0%
TGAGTGGGAGAACTAGTTGC+AGG + chr4_3:61376996-61377015 None:intergenic 50.0%
ACCTGCTTTCCCTGATGAGT+GGG + chr4_3:61377011-61377030 None:intergenic 50.0%
TACCTGCTTTCCCTGATGAG+TGG + chr4_3:61377012-61377031 None:intergenic 50.0%
! TGCAAGCAGTGAGTTGGGAA+CGG - chr4_3:61377140-61377159 Msa0653370:CDS 50.0%
TCAAGACCCAACAGATTGGC+AGG + chr4_3:61377758-61377777 None:intergenic 50.0%
CCACTGAATGGAAAATCCCG+GGG - chr4_3:61377880-61377899 Msa0653370:CDS 50.0%
AGCTGCGATCCATCTTGAGA+TGG - chr4_3:61378002-61378021 Msa0653370:intron 50.0%
! CGCTGATTGCCATCTCAAGA+TGG + chr4_3:61378014-61378033 None:intergenic 50.0%
GTAATACATGGGATGGGCAC+TGG - chr4_3:61378060-61378079 Msa0653370:intron 50.0%
! AATACATGGGATGGGCACTG+GGG - chr4_3:61378062-61378081 Msa0653370:intron 50.0%
TCTTCAACGGTCTTGATGCC+CGG + chr4_3:61378815-61378834 None:intergenic 50.0%
! AGAAACTGTCAAGAGCGTGG+TGG - chr4_3:61378832-61378851 Msa0653370:CDS 50.0%
! GAAACTGTCAAGAGCGTGGT+GGG - chr4_3:61378833-61378852 Msa0653370:CDS 50.0%
! AAACTGTCAAGAGCGTGGTG+GGG - chr4_3:61378834-61378853 Msa0653370:CDS 50.0%
!! CTTGATTGGTATCGGTGTGG+CGG + chr4_3:61378901-61378920 None:intergenic 50.0%
!! GGTCTTGATTGGTATCGGTG+TGG + chr4_3:61378904-61378923 None:intergenic 50.0%
! AGCACAGTGGTGGTCTTGAT+TGG + chr4_3:61378915-61378934 None:intergenic 50.0%
AATCAAGACCACCACTGTGC+TGG - chr4_3:61378914-61378933 Msa0653370:CDS 50.0%
ATCAAGACCACCACTGTGCT+GGG - chr4_3:61378915-61378934 Msa0653370:CDS 50.0%
CAACTGCATTCTCCACTCGA+TGG + chr4_3:61379069-61379088 None:intergenic 50.0%
TCCTTGCAATACGTGGCCTT+TGG + chr4_3:61379094-61379113 None:intergenic 50.0%
!! GATTATTGGTGCCGCAGAGA+AGG - chr4_3:61379129-61379148 Msa0653370:CDS 50.0%
TGCCGCAGAGAAGGAACATA+AGG - chr4_3:61379138-61379157 Msa0653370:CDS 50.0%
! GGCCTTATGTTCCTTCTCTG+CGG + chr4_3:61379143-61379162 None:intergenic 50.0%
GGCCTAATCGTACCTGTCTT+TGG - chr4_3:61379159-61379178 Msa0653370:CDS 50.0%
GATGGGGATGAAGAGGTTGC+AGG + chr4_3:61373167-61373186 None:intergenic 55.0%
GAAGGAGAAGCGAGGGATTG+AGG + chr4_3:61373197-61373216 None:intergenic 55.0%
AACAACGCCCGTTTACCCGT+CGG - chr4_3:61373346-61373365 Msa0653370:three_prime_UTR 55.0%
AGTACGTCCGACGGGTAAAC+GGG + chr4_3:61373356-61373375 None:intergenic 55.0%
GAGTACGTCCGACGGGTAAA+CGG + chr4_3:61373357-61373376 None:intergenic 55.0%
TCTGTTGGAGTACGTCCGAC+GGG + chr4_3:61373364-61373383 None:intergenic 55.0%
GTCTGTTGGAGTACGTCCGA+CGG + chr4_3:61373365-61373384 None:intergenic 55.0%
CTTCGAACCGTGCAAAGCTC+GGG + chr4_3:61373514-61373533 None:intergenic 55.0%
AAGAACACTCGCTGCTGCCA+GGG - chr4_3:61373531-61373550 Msa0653370:three_prime_UTR 55.0%
! GCGTCGATCTAGAATGTGCG+TGG - chr4_3:61374655-61374674 Msa0653370:intron 55.0%
CTAGAATGTGCGTGGGCATC+AGG - chr4_3:61374663-61374682 Msa0653370:intron 55.0%
TGGGCATCAGGGCTTCGTAT+AGG - chr4_3:61374675-61374694 Msa0653370:intron 55.0%
! GTTCTGAATGCCAGCAGCTC+TGG - chr4_3:61374719-61374738 Msa0653370:intron 55.0%
GTATGTTGCTCCAGAGCTGC+TGG + chr4_3:61374732-61374751 None:intergenic 55.0%
!! TTCAAACTCTGAAGCGGCCG+AGG - chr4_3:61374802-61374821 Msa0653370:intron 55.0%
CTTGGCAGGCAGATGCATTC+CGG + chr4_3:61375329-61375348 None:intergenic 55.0%
GAAAGAGCCACGCCTTCTGA+AGG + chr4_3:61375697-61375716 None:intergenic 55.0%
TGAGGCACGGCATGATGTGT+TGG + chr4_3:61376302-61376321 None:intergenic 55.0%
TCTTGGCTATCCCCGAGGAT+TGG + chr4_3:61376336-61376355 None:intergenic 55.0%
CAAGGTCTTCTGCCTCCCTT+TGG + chr4_3:61376569-61376588 None:intergenic 55.0%
CTGATGGGAGAACCAACAGC+AGG + chr4_3:61376783-61376802 None:intergenic 55.0%
!! GCTGTTGGTTCTCCCATCAG+TGG - chr4_3:61376783-61376802 Msa0653370:CDS 55.0%
ATGCGATCAGCGCCACTGAT+GGG + chr4_3:61376798-61376817 None:intergenic 55.0%
AATGCGATCAGCGCCACTGA+TGG + chr4_3:61376799-61376818 None:intergenic 55.0%
TGGAGAGCAAGTCCGTGTGA+AGG - chr4_3:61376839-61376858 Msa0653370:intron 55.0%
GGAGAGCAAGTCCGTGTGAA+GGG - chr4_3:61376840-61376859 Msa0653370:intron 55.0%
GCAAGTCCGTGTGAAGGGAT+TGG - chr4_3:61376845-61376864 Msa0653370:intron 55.0%
GCCACAGTGGTAGAATTGCC+TGG - chr4_3:61376879-61376898 Msa0653370:intron 55.0%
CCCAGGCAATTCTACCACTG+TGG + chr4_3:61376883-61376902 None:intergenic 55.0%
TCCCACTCATCAGGGAAAGC+AGG - chr4_3:61377007-61377026 Msa0653370:intron 55.0%
! AGCAGTGAGTTGGGAACGGT+TGG - chr4_3:61377144-61377163 Msa0653370:CDS 55.0%
! GCAGTGAGTTGGGAACGGTT+GGG - chr4_3:61377145-61377164 Msa0653370:CDS 55.0%
! CCCCGGGATTTTCCATTCAG+TGG + chr4_3:61377883-61377902 None:intergenic 55.0%
GGATCTACGAGGTATGCGAC+TGG - chr4_3:61377975-61377994 Msa0653370:CDS 55.0%
ATGCGGTTCAACGCCGTCTA+CGG - chr4_3:61378758-61378777 Msa0653370:intron 55.0%
CTCCTTGGCGTATCCGTAGA+CGG + chr4_3:61378774-61378793 None:intergenic 55.0%
! GAGCTCATTGGAGCACTCCT+TGG + chr4_3:61378789-61378808 None:intergenic 55.0%
!! AGGAGTGCTCCAATGAGCTC+AGG - chr4_3:61378789-61378808 Msa0653370:intron 55.0%
GGATCTCATCGGGAACAAGG+TGG + chr4_3:61378877-61378896 None:intergenic 55.0%
GGAGGATCTCATCGGGAACA+AGG + chr4_3:61378880-61378899 None:intergenic 55.0%
TTCAGAGACGGTGCCTACGT+TGG + chr4_3:61378957-61378976 None:intergenic 55.0%
! CGTAGGCACCGTCTCTGAAA+TGG - chr4_3:61378958-61378977 Msa0653370:CDS 55.0%
!! AGGCACCGTCTCTGAAATGG+CGG - chr4_3:61378961-61378980 Msa0653370:CDS 55.0%
CCTCACCGCCATTTCAGAGA+CGG + chr4_3:61378969-61378988 None:intergenic 55.0%
GTCTCCGATGTTCCATCGAG+TGG - chr4_3:61379054-61379073 Msa0653370:CDS 55.0%
GGAGAATGCAGTTGCGCCAA+AGG - chr4_3:61379075-61379094 Msa0653370:CDS 55.0%
GCCAAAGGCCACGTATTGCA+AGG - chr4_3:61379090-61379109 Msa0653370:CDS 55.0%
! GCAGGTGAGTTGCATCGGTG+TGG + chr4_3:61373149-61373168 None:intergenic 60.0%
! TAAACGGGCGTTGTTGGCGG+CGG + chr4_3:61373341-61373360 None:intergenic 60.0%
! GGGTAAACGGGCGTTGTTGG+CGG + chr4_3:61373344-61373363 None:intergenic 60.0%
! GACGGGTAAACGGGCGTTGT+TGG + chr4_3:61373347-61373366 None:intergenic 60.0%
AGGAATGAGTCTGGCAGCGG+AGG + chr4_3:61373410-61373429 None:intergenic 60.0%
GAAGAACACTCGCTGCTGCC+AGG - chr4_3:61373530-61373549 Msa0653370:three_prime_UTR 60.0%
!! TCCTAATGGGCTTGGAGCGC+AGG - chr4_3:61374459-61374478 Msa0653370:CDS 60.0%
TCCTGCGCTCCAAGCCCATT+AGG + chr4_3:61374463-61374482 None:intergenic 60.0%
CTCCGCTCTTGCTGCTGTTC+TGG + chr4_3:61375979-61375998 None:intergenic 60.0%
GAACAGCAGCAAGAGCGGAG+AGG - chr4_3:61375979-61375998 Msa0653370:intron 60.0%
ACAGCTCTTGGCTATCCCCG+AGG + chr4_3:61376341-61376360 None:intergenic 60.0%
GTCCGTGTGAAGGGATTGGG+AGG - chr4_3:61376849-61376868 Msa0653370:intron 60.0%
AGGGGTTGAGAGGGAGAGAC+CGG - chr4_3:61377481-61377500 Msa0653370:CDS 60.0%
! CAGCAGCTTGGACCCGCTTT+TGG - chr4_3:61378226-61378245 Msa0653370:intron 60.0%
!! CTTGGACCCGCTTTTGGCGA+GGG - chr4_3:61378232-61378251 Msa0653370:intron 60.0%
GAGGAGAACAAACGCACCGG+AGG + chr4_3:61378628-61378647 None:intergenic 60.0%
! AGACGGCGTTGAACCGCATG+AGG + chr4_3:61378757-61378776 None:intergenic 60.0%
GTGCTCCAATGAGCTCAGGC+CGG - chr4_3:61378793-61378812 Msa0653370:intron 60.0%
TGCTCCAATGAGCTCAGGCC+GGG - chr4_3:61378794-61378813 Msa0653370:intron 60.0%
! GTGTGGCGGAGGATCTCATC+GGG + chr4_3:61378887-61378906 None:intergenic 60.0%
! GGTGTGGCGGAGGATCTCAT+CGG + chr4_3:61378888-61378907 None:intergenic 60.0%
!! GATTGGTATCGGTGTGGCGG+AGG + chr4_3:61378898-61378917 None:intergenic 60.0%
ACGGTGCCTACGTTGGCAAC+GGG + chr4_3:61378950-61378969 None:intergenic 60.0%
GACGGTGCCTACGTTGGCAA+CGG + chr4_3:61378951-61378970 None:intergenic 60.0%
!! CCGTCTCTGAAATGGCGGTG+AGG - chr4_3:61378966-61378985 Msa0653370:CDS 60.0%
TTACTCCAAGTGCGAGCCCG+TGG - chr4_3:61378991-61379010 Msa0653370:CDS 60.0%
AGCCACAGTCTGCTCTGCCA+CGG + chr4_3:61379011-61379030 None:intergenic 60.0%
GGCAGAGCAGACTGTGGCTT+CGG - chr4_3:61379012-61379031 Msa0653370:CDS 60.0%
GGCGGAGGAGCCCATTGAAG+TGG + chr4_3:61373323-61373342 None:intergenic 65.0%
!! GCTTGGACCCGCTTTTGGCG+AGG - chr4_3:61378231-61378250 Msa0653370:intron 65.0%
CGCCGTCTACGGATACGCCA+AGG - chr4_3:61378769-61378788 Msa0653370:intron 65.0%
GATGCCCGGCCTGAGCTCAT+TGG + chr4_3:61378801-61378820 None:intergenic 65.0%
ACCACCACTGTGCTGGGCAC+AGG - chr4_3:61378921-61378940 Msa0653370:CDS 65.0%
CCACCACTGTGCTGGGCACA+GGG - chr4_3:61378922-61378941 Msa0653370:CDS 65.0%
AGGGCTCCCGTTGCCAACGT+AGG - chr4_3:61378941-61378960 Msa0653370:CDS 65.0%
GCCACAGTCTGCTCTGCCAC+GGG + chr4_3:61379010-61379029 None:intergenic 65.0%
AGCAGACTGTGGCTTCGGCG+TGG - chr4_3:61379017-61379036 Msa0653370:CDS 65.0%
TGTGGCTTCGGCGTGGCAGA+AGG - chr4_3:61379024-61379043 Msa0653370:CDS 65.0%
CCCTGTGCCCAGCACAGTGG+TGG + chr4_3:61378925-61378944 None:intergenic 70.0%
GAGCCCTGTGCCCAGCACAG+TGG + chr4_3:61378928-61378947 None:intergenic 70.0%
CTCTGCCACGGGCTCGCACT+TGG + chr4_3:61378999-61379018 None:intergenic 70.0%
GCCCGTGGCAGAGCAGACTG+TGG - chr4_3:61379006-61379025 Msa0653370:CDS 70.0%
! ACGGGCGTTGTTGGCGGCGG+AGG + chr4_3:61373338-61373357 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 61373087 61379347 61373087 ID=Msa0653370;Name=Msa0653370
chr4_3 mRNA 61373087 61379347 61373087 ID=Msa0653370-mRNA-1;Parent=Msa0653370;Name=Msa0653370-mRNA-1;_AED=0.10;_eAED=0.10;_QI=67|0.8|0.83|1|0.6|0.33|6|1066|947
chr4_3 exon 61373087 61373713 61373087 ID=Msa0653370-mRNA-1:exon:16808;Parent=Msa0653370-mRNA-1
chr4_3 exon 61373804 61374557 61373804 ID=Msa0653370-mRNA-1:exon:16807;Parent=Msa0653370-mRNA-1
chr4_3 exon 61375406 61375972 61375406 ID=Msa0653370-mRNA-1:exon:16806;Parent=Msa0653370-mRNA-1
chr4_3 exon 61376333 61376857 61376333 ID=Msa0653370-mRNA-1:exon:16805;Parent=Msa0653370-mRNA-1
chr4_3 exon 61377029 61378013 61377029 ID=Msa0653370-mRNA-1:exon:16804;Parent=Msa0653370-mRNA-1
chr4_3 exon 61378829 61379347 61378829 ID=Msa0653370-mRNA-1:exon:16803;Parent=Msa0653370-mRNA-1
chr4_3 five_prime_UTR 61379281 61379347 61379281 ID=Msa0653370-mRNA-1:five_prime_utr;Parent=Msa0653370-mRNA-1
chr4_3 CDS 61378829 61379280 61378829 ID=Msa0653370-mRNA-1:cds;Parent=Msa0653370-mRNA-1
chr4_3 CDS 61377029 61378013 61377029 ID=Msa0653370-mRNA-1:cds;Parent=Msa0653370-mRNA-1
chr4_3 CDS 61376333 61376857 61376333 ID=Msa0653370-mRNA-1:cds;Parent=Msa0653370-mRNA-1
chr4_3 CDS 61375406 61375972 61375406 ID=Msa0653370-mRNA-1:cds;Parent=Msa0653370-mRNA-1
chr4_3 CDS 61374243 61374557 61374243 ID=Msa0653370-mRNA-1:cds;Parent=Msa0653370-mRNA-1
chr4_3 three_prime_UTR 61373804 61374242 61373804 ID=Msa0653370-mRNA-1:three_prime_utr;Parent=Msa0653370-mRNA-1
chr4_3 three_prime_UTR 61373087 61373713 61373087 ID=Msa0653370-mRNA-1:three_prime_utr;Parent=Msa0653370-mRNA-1
Gene Sequence

>Msa0653370

ATGCAACTCACCTGCAACCTCTTCATCCCCATCAACAAACCCTCAATCCCTCGCTTCTCCTTCAAACCTTGCTTCTGCTACTCAACCGAGTCCAACTCAGTCCAATCCGATAGCCTCAAAACTCTCGAATGGAACTCCATATGCAAGCAACTCTCAGCATTCACTTCCACTTCAATGGGCTCCTCCGCCGCCAACAACGCCCGTTTACCCGTCGGACGTACTCCAACAGACAGCCAAAAGCTTCTCGATCAAACCTCCGCTGCCAGACTCATTCCTCAACAACAACTCGACTTTTCTGGAATACATGACTTGACTGACATTCTCTCCGTTGCTGTTTCCGGTAGATTGTTGACTATTCCCGAGCTTTGCACGGTTCGAAGAACACTCGCTGCTGCCAGGGAATTGTTTGATAGTTTGAAACACTTGGCTTCTGTATCTAATCATTCACACAGGTACTCACCCCTTCTTGAAATACTGCAAAATTGTAATTTCCTAATGGGCTTGGAGCGCAGGATAGAATTTTGCATAGATTGCAATCTTTTGGTAATTCTTGATAGAGCAAGTGAAGACCTGGAGATCATTAGATCAGAACGAAAAAGGAACATAGAAATCCTGGACTCTTTATTGAAGGAAGTATCGTCTCAAATTTTTCGGGCTGGGGGTATTGACAGACCATTTATTACTAAGCGTCGATCTAGAATGTGCGTGGGCATCAGGGCTTCGTATAGGTATTTGCTTCCAGAAGGTATAGTTCTGAATGCCAGCAGCTCTGGAGCAACATACTTTATGGAACCGAAAGAAGCAATAGATTTGAACAACATGGAAGTTAGGCTTTCAAACTCTGAAGCGGCCGAGGAAAGAGCAATTTTGAGTATGCTTGCATCTGAAATAGCAAATTCAGAATCAGAGATAAAATATTTGTTGGATAAAATTCTTGAGGTTGATCTTGCTTTTGCAAGAGCTGCCTATGCTCAATGGATGAATGGGGTATGTCCAATTTTCAGTTTAGGTACTCTTGGAGGTTGCAATTCTGTTGAAGAGGACAATGACATTGCGGTTGTGCAGGATGACGATTTAACGGTAAATATTGAGGGTATGCGGCATCCATTACTCCTGGAGTCGTCTCTAGAAAACATTTCAGATAATGTCACACTAAGGTCTGGAAATTCTTCTGAGTTGGGTATTGGAAATGGAACAATGGCTTCTAAAAGCGCGTCACAAGGCATAACAGACTTCCCTGTGCCAGTTGACTTCAAAATTAGATCTGGAACTAGAGTGGTGGTCATCTCAGGACCTAATACTGGAGGGAAAACTGCTTCAATGAAAACGTTGGGCCTGGCATCACTTATGTCAAAAGCCGGAATGCATCTGCCTGCCAAGAAAAGTCCAAAACTTCCTTGGTTTGACCTTATCCTTGCGGATATTGGAGATCACCAGTCCCTTGAACAAAATCTCTCAACTTTTAGTGGGCACATCTCACGTATCCGTAAGTTTTTGGAAGTGGCCTCAAAACAATCACTTGTTCTCATTGATGAAATTGGTAGTGGAACTGATCCTTCAGAAGGCGTGGCTCTTTCTGCCAGTATCTTACAATATCTGCGTGAACATGTTAACTTGGCTGTTGTGACCACTCATTATGCTGATCTAAGTACTTTGAAGGAAAGGGATACATGTTTTGAAAATGCCGCAATGGAATTTTCACTGGAAACCTTGCAACCAACTTATAGGGTTCTCTGGGGATGTATCGGTGATTCAAATGCATTAAGCATAGCGCAATCTATTGGCTTTGATAAAAATATAATTGACCATGCACAAAAGTGGGTGGAGAAGTTAAAACCAGAACAGCAGCAAGAGCGGAGAGGAATGCTCTATCAGTCATTACAGGAGGAAAAAAATCGGTTAAAGGCTCAAGCTGAAAAAGCTGCTTCCATTCATGCAGAAATTGTGAACGTGTACTCTGAGTCTGTAATTGAATGTCATCATATTTGCTGTTGCTCATTGCTTTGCACTTTCTTGGCCGTCTATCCATCTCCTTCACTCTTTTCCTTTTCTTCTTTTGCAAAGATCCAAAGGGAGGCAGAAGACCTTGATAGACGTGAAACGATGCTTATGGCAAAGGAAGCTCAACAGGTCCAACAAGAGTTAGAGGATGCAAAATCTCAAATGGAAATTGTAATACAGAAATTCGAAAAGCAACTAAAAGATTTGGGACGCAACCAACTCAATTCAATAATTAAAGAATCTGAAACTGCAATTGCCTCCATTGTAAAAGCTCATACTCCTGCTGTTGGTTCTCCCATCAGTGGCGCTGATCGCATTACATCATATACTCCACAATTTGGAGAGCAAGTCCGTGTGAAGGGATTGGGAGGAAAATTAGCCACAGTGGTAGAATTGCCTGGGGATGATGAAACAATCTTGGTACAGTATGGTAAAGTGAAAGTACGTGTGAAGAAAAATCGCATCAGAGCTATTCCACCAAGTGCAAAGAATCCTGCAACTAGTTCTCCCACTCATCAGGGAAAGCAGAAACCACTGAATGGAAAATCCCGGGGTAACTTAGAGATGAACAGCAGCAATGGTGATATTTATTATGGTCCAGCGGTGCAAACATCTAAGAATACTGTGGATCTACGAGGTATGCGACTGGAAGAAGCTGCGATCCATCTTGAGATGGCAATCAGCGCAAGTCAGCCATATTCAGTTCTCTTTGTAATACATGGGATGGGCACTGGGGCTGTTAAAGATCGTGCACTTGCTATTCTGCAAAAGCATCCTCGTGTCACTCATTTTGAACCAGAAAGTCCAATGAATTATGGATGTACTGTTGCACGTGTTAAGTGA
Protein sequence

>Msa0653370

MQLTCNLFIPINKPSIPRFSFKPCFCYSTESNSVQSDSLKTLEWNSICKQLSAFTSTSMGSSAANNARLPVGRTPTDSQKLLDQTSAARLIPQQQLDFSGIHDLTDILSVAVSGRLLTIPELCTVRRTLAAARELFDSLKHLASVSNHSHRYSPLLEILQNCNFLMGLERRIEFCIDCNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCVGIRASYRYLLPEGIVLNASSSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASEIANSESEIKYLLDKILEVDLAFARAAYAQWMNGVCPIFSLGTLGGCNSVEEDNDIAVVQDDDLTVNIEGMRHPLLLESSLENISDNVTLRSGNSSELGIGNGTMASKSASQGITDFPVPVDFKIRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILADIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYLREHVNLAVVTTHYADLSTLKERDTCFENAAMEFSLETLQPTYRVLWGCIGDSNALSIAQSIGFDKNIIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIVNVYSESVIECHHICCCSLLCTFLAVYPSPSLFSFSSFAKIQREAEDLDRRETMLMAKEAQQVQQELEDAKSQMEIVIQKFEKQLKDLGRNQLNSIIKESETAIASIVKAHTPAVGSPISGADRITSYTPQFGEQVRVKGLGGKLATVVELPGDDETILVQYGKVKVRVKKNRIRAIPPSAKNPATSSPTHQGKQKPLNGKSRGNLEMNSSNGDIYYGPAVQTSKNTVDLRGMRLEEAAIHLEMAISASQPYSVLFVIHGMGTGAVKDRALAILQKHPRVTHFEPESPMNYGCTVARVK*