AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1264190


Find 266 sgRNAs with CRISPR-Local

Find 992 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_2 gene 67538108 67554501 67538108 ID=Msa1264190;Name=Msa1264190
chr8_2 mRNA 67538108 67554501 67538108 ID=Msa1264190-mRNA-1;Parent=Msa1264190;Name=Msa1264190-mRNA-1;_AED=0.18;_eAED=0.19;_QI=0|0.36|0.3|0.95|0.42|0.35|20|175|1087
chr8_2 exon 67538108 67538241 67538108 ID=Msa1264190-mRNA-1:exon:22240;Parent=Msa1264190-mRNA-1
chr8_2 exon 67541093 67541187 67541093 ID=Msa1264190-mRNA-1:exon:22241;Parent=Msa1264190-mRNA-1
chr8_2 exon 67541305 67541533 67541305 ID=Msa1264190-mRNA-1:exon:22242;Parent=Msa1264190-mRNA-1
chr8_2 exon 67541540 67541727 67541540 ID=Msa1264190-mRNA-1:exon:22243;Parent=Msa1264190-mRNA-1
chr8_2 exon 67541734 67541976 67541734 ID=Msa1264190-mRNA-1:exon:22244;Parent=Msa1264190-mRNA-1
chr8_2 exon 67542171 67542352 67542171 ID=Msa1264190-mRNA-1:exon:22245;Parent=Msa1264190-mRNA-1
chr8_2 exon 67542967 67543056 67542967 ID=Msa1264190-mRNA-1:exon:22246;Parent=Msa1264190-mRNA-1
chr8_2 exon 67543234 67543476 67543234 ID=Msa1264190-mRNA-1:exon:22247;Parent=Msa1264190-mRNA-1
chr8_2 exon 67543769 67543990 67543769 ID=Msa1264190-mRNA-1:exon:22248;Parent=Msa1264190-mRNA-1
chr8_2 exon 67544091 67544267 67544091 ID=Msa1264190-mRNA-1:exon:22249;Parent=Msa1264190-mRNA-1
chr8_2 exon 67545369 67545376 67545369 ID=Msa1264190-mRNA-1:exon:22250;Parent=Msa1264190-mRNA-1
chr8_2 exon 67551070 67551153 67551070 ID=Msa1264190-mRNA-1:exon:22251;Parent=Msa1264190-mRNA-1
chr8_2 exon 67551202 67551418 67551202 ID=Msa1264190-mRNA-1:exon:22252;Parent=Msa1264190-mRNA-1
chr8_2 exon 67551467 67551704 67551467 ID=Msa1264190-mRNA-1:exon:22253;Parent=Msa1264190-mRNA-1
chr8_2 exon 67551711 67551953 67551711 ID=Msa1264190-mRNA-1:exon:22254;Parent=Msa1264190-mRNA-1
chr8_2 exon 67552148 67552329 67552148 ID=Msa1264190-mRNA-1:exon:22255;Parent=Msa1264190-mRNA-1
chr8_2 exon 67553216 67553305 67553216 ID=Msa1264190-mRNA-1:exon:22256;Parent=Msa1264190-mRNA-1
chr8_2 exon 67553483 67553716 67553483 ID=Msa1264190-mRNA-1:exon:22257;Parent=Msa1264190-mRNA-1
chr8_2 exon 67554008 67554142 67554008 ID=Msa1264190-mRNA-1:exon:22258;Parent=Msa1264190-mRNA-1
chr8_2 exon 67554297 67554501 67554297 ID=Msa1264190-mRNA-1:exon:22259;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67538108 67538241 67538108 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67541093 67541187 67541093 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67541305 67541533 67541305 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67541540 67541727 67541540 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67541734 67541976 67541734 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67542171 67542352 67542171 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67542967 67543056 67542967 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67543234 67543476 67543234 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67543769 67543990 67543769 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67544091 67544267 67544091 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67545369 67545376 67545369 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67551070 67551153 67551070 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67551202 67551418 67551202 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67551467 67551704 67551467 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67551711 67551953 67551711 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67552148 67552329 67552148 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67553216 67553305 67553216 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67553483 67553716 67553483 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67554008 67554142 67554008 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 CDS 67554297 67554326 67554297 ID=Msa1264190-mRNA-1:cds;Parent=Msa1264190-mRNA-1
chr8_2 three_prime_UTR 67554327 67554501 67554327 ID=Msa1264190-mRNA-1:three_prime_utr;Parent=Msa1264190-mRNA-1
Gene Sequence

>Msa1264190

ATGGAGAAAGAGGAGAGTGGTCTCGCGGCTCACCGGCGGTGGTGTAGTGGTGGATCGATTTGCTATGCTTGGGAGAAGAAAAGGATCCCGTTTCACTTTCTTGTTCTCACTTGGTTCTCAGATGAAAGAGAAACAGCTTCAATGGACTACAGCTCTGAAGAAGAGTCAGATATCAGTGAGTCTGAGATTGAGGAATACTCTGACAAACCTTATAAGGAGTTAAAGGATGGTTCAGCAAACAGAAACGCCAAACAAAAGGCAAACCACCTCGCTCTGGCAAAGTATTTGGAGACCGACCTAGTAAATGAAGCAGACCAAATACCTCCCCCGGCTTTGGCCGAAGCTGTCAACCAACCTGCACCGCAGGTTGAGAATTATGTCTGGCCATGGACAGGCATAATCGTTAACATTAAGAGCAACCTTAATGATTCTGGATACTGGCTAAAGGAATTTGCCAAACCATTGGATGTCCATGTATTCTTCATGGATGGTGACACTCAGGCTGTAGTAGACTTCAACAATGACTGGAATGGTTTCATGAATGCAAGTGAATTTGAGAAATCCTTTGAAACTAAACATCATGGGAAGAAGGACTGGAATTCAAAGGACATGCAGGCCAGTTCAGACATTTATGGATGGGTTGCACATGATTATAATTGTGGAGGGCCAATCGGGGAGTACCTTCGGAACAAAGGAAGGCTGAGAACAATTTCAGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAGCATTGTGGAAAACCTGGCCAATGAAATTGACATTACAAATGAAAACCTCAACAAAATGCAGTATAAGTATAATGAGAAGACCATGTCCTTAAGTAGGATGCTGGAGGAGAAAGACAGGCTTCACAATGCTTTTGTTGAAGAGTCAAGGAGTATGCAGCGTAAAGCCCGTGAGGAGGTACGAAGGATCTTGGAAGAACAAGAAAAGTTGCGTAATGAATTGGATGAAAAAATGCGGAAGCTTGATACCTGGAGCAGAGATCTAAATAAGCGTGAGGTACTAACTGATCAAGAGAGGCAGAAACTGGAAGAGGACAAGAAAAAGAAAGACTCGAGGAATGAATCACTCTTGTTGGCTTCAAAGGAGCAGAAGATAGCTGATGAGAATGTCTTCAGGCTTGTTGAAGAGCAAAAGCAACTAGATGCCAAACAAAAATTAGAAATGGAGATTGAGGAACTAAAAGGGAAATTGCAAGTTATGAAACATCTTGGAGATCAAGATGATGAAGCTATTAAGAAAAAAATGGAAGAAATGAGCACTGAATTGGCAGACAAAATAGAAAGTTTGGAGGATATGGAGTCTATGAATCAAACCCTCATTGTCAAGGAGCGCCAGAGCAATGATGAACTACAGGAAGCTCGTAAAGAGTTAATAATTGGGTTAAATGAAATGCTGAAGGGTAATAATAAAACTAATATTGGGACGAAAAGAATGGGAGACCTTGATGAGAAGGTTTTTGTGAAAGTCTGCAAGAAAAGATTTCTTTCTCAAGAAGAAGCTGGGATGAAGGCCATGGAGCTTTGCTCTGTTTGGCAGGAGAATGTGAAAAATTCAGCATGGCACCCTTTAAAAGTGGTCAGAGTGAATGATACCCATGAGTCAGTTATAGATGAGGAAGATGAGAAATTAAAAAAGCTCAAGCAGGAATGGGGAGATGAGATATATTCAGCTGTTGAAACAGCCTTGAAAGAAGTAAATGAATACAACCCAAGTGGTGGGTATGCTGTACATGAGCTATGGAACTTCAAGGAACAGAGGAAGGCAACACTAAAAGAATTGGAAAAAGCTTCAATGGACTACAACTCTGAAGAAGAGTCAGATATCAGTGAGTCTGAGATTGAGGAATACTCTGACAAACCTTATAAGGAGTGCCCATATTGTGCTGGAAAAAAGAAGAAAGAGTTCAAATATAAGGATTTGATGCAACATGCAACCGGAGTAAGCAAAGGTTCAGCAAACAGAAACGCCAAACAAAAGGCAAACCACCTCGCTCTGGCAAAGTTTTTGGAGACCGACCTAGTAAATGAAGCAGACCAAATACCTCCCCCGGCTTTGGTCGAAGCTGTCAACCATCCTGTACCGCAGAGCAACCTTAATGATTCTGGATACTGGCTAAAGGAATTTGCAAAGTACAGACCATTGGATGTCCATGTATTCTTCATGGATGGTGACACTCAGGCTGTAGTAGACTTCATCAATGACTGGAATGGTTTCAAGAATGCAAGTGAATTTGAGAGATCCTTTGAAACTAAACATCATGGGAAGAAGGAATGGAATTCAATGGACATGCAGGCCAGTTCAGACATTTATGGATGGGTTGCACATGATTATAATTGTGGAGGGCCAATCGGGGAGTACCTTCGGAACAAAGGAAGGCTGAGAACAATTTCGGATTTTCTTAAAGAACCATCTGAAAGAGAAAATAGAAAATCGGAAAACCTAGCCAATGAAATTGACATTACAAATGAAAACCTCTACAAAATGCAGTATAAGTATAATGAGAGGATCATGTCCATAAGTAGGATGCTGGAGGAGAAAGACAGGCTTCACAATGCTTTTGTTGAAGAGTCAAGGAGTATGCGGCGTAAAGCCCATGAGGAGGTGCGAAGGATCTTGGAAGAACAGGAAAAGTTGCGTAATGAATTGGATGAAAAAATGCGGAAGCTTGATACCTGGAGCAGAGATCTAAATAAGCGTGAGGTACTAACCGATCAAGAGAGGCAGAAACTGGAAGAGGACAAGAAGAAGAAAGACTCGAGGAATGAGTTACTCTTGTTGGCTTCAAAGGAGCAGAAGATAGCTGATGAGAATGTCTTCAGGCTTATTGAAGAGCAAAAGCAACTAGATGCCAAACAAAAATTAGAAATGGAGATTGAGGAACTAAAAGGGAAATTGCAAGTTATGAAACATCTTGGAGATCAAGATGATGAAGCTATTAAGAAAAAAATGGAAGAAATGAGTACTGAATTGGAAGAAAGTTTGGAGGATATGAAGTCTATGAATCAAATCCTCATTGACAAGGAGTGCCAGAGCAATGATGAACTACAAGAAGCTCGTAAAGAATTAATAAATCGGTTAAATGAAATGCTGAAGGGTAATAATAAAACTAATATTGGGACGAAAAGAATGGGAGACCTTAATGCTGAAGGGTATGCTGAATTTGAGCTATGGAACTTCAAGGAACAGAGGAAGGCAACACTAAAAGAAGAGCATCTCAATGCCGAGTTGGAAAAGTAG

Protein sequence

>Msa1264190

MEKEESGLAAHRRWCSGGSICYAWEKKRIPFHFLVLTWFSDERETASMDYSSEEESDISESEIEEYSDKPYKELKDGSANRNAKQKANHLALAKYLETDLVNEADQIPPPALAEAVNQPAPQVENYVWPWTGIIVNIKSNLNDSGYWLKEFAKPLDVHVFFMDGDTQAVVDFNNDWNGFMNASEFEKSFETKHHGKKDWNSKDMQASSDIYGWVAHDYNCGGPIGEYLRNKGRLRTISDIVQEASESRNSIVENLANEIDITNENLNKMQYKYNEKTMSLSRMLEEKDRLHNAFVEESRSMQRKAREEVRRILEEQEKLRNELDEKMRKLDTWSRDLNKREVLTDQERQKLEEDKKKKDSRNESLLLASKEQKIADENVFRLVEEQKQLDAKQKLEMEIEELKGKLQVMKHLGDQDDEAIKKKMEEMSTELADKIESLEDMESMNQTLIVKERQSNDELQEARKELIIGLNEMLKGNNKTNIGTKRMGDLDEKVFVKVCKKRFLSQEEAGMKAMELCSVWQENVKNSAWHPLKVVRVNDTHESVIDEEDEKLKKLKQEWGDEIYSAVETALKEVNEYNPSGGYAVHELWNFKEQRKATLKELEKASMDYNSEEESDISESEIEEYSDKPYKECPYCAGKKKKEFKYKDLMQHATGVSKGSANRNAKQKANHLALAKFLETDLVNEADQIPPPALVEAVNHPVPQSNLNDSGYWLKEFAKYRPLDVHVFFMDGDTQAVVDFINDWNGFKNASEFERSFETKHHGKKEWNSMDMQASSDIYGWVAHDYNCGGPIGEYLRNKGRLRTISDFLKEPSERENRKSENLANEIDITNENLYKMQYKYNERIMSISRMLEEKDRLHNAFVEESRSMRRKAHEEVRRILEEQEKLRNELDEKMRKLDTWSRDLNKREVLTDQERQKLEEDKKKKDSRNELLLLASKEQKIADENVFRLIEEQKQLDAKQKLEMEIEELKGKLQVMKHLGDQDDEAIKKKMEEMSTELEESLEDMKSMNQILIDKECQSNDELQEARKELINRLNEMLKGNNKTNIGTKRMGDLNAEGYAEFELWNFKEQRKATLKEEHLNAELEK*