Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061290 | XP_013466588.1 | 93.258 | 534 | 32 | 1 | 1 | 530 | 1 | 534 | 0.0 | 1042 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061290 | sp|Q8GUU3|CPS3B_ARATH | 70.787 | 534 | 134 | 4 | 1 | 530 | 1 | 516 | 0.0 | 787 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061290 | A0A072VR63 | 93.258 | 534 | 32 | 1 | 1 | 530 | 1 | 534 | 0.0 | 1042 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0061290 | 0.801415 | 9.100421e-49 | -8.615850e-47 |
| Msa0012080 | Msa0061290 | 0.819074 | 1.405782e-52 | -8.615850e-47 |
| Msa0017510 | Msa0061290 | 0.814411 | 1.561869e-51 | -8.615850e-47 |
| Msa0021510 | Msa0061290 | 0.807658 | 4.539669e-50 | -8.615850e-47 |
| Msa0027230 | Msa0061290 | 0.806888 | 6.609657e-50 | -8.615850e-47 |
| Msa0029270 | Msa0061290 | 0.851415 | 9.006652e-61 | -8.615850e-47 |
| Msa0032090 | Msa0061290 | 0.861535 | 9.580093e-64 | -8.615850e-47 |
| Msa0032430 | Msa0061290 | 0.887266 | 1.660047e-72 | -8.615850e-47 |
| Msa0034870 | Msa0061290 | 0.811374 | 7.228016e-51 | -8.615850e-47 |
| Msa0036870 | Msa0061290 | 0.816721 | 4.779838e-52 | -8.615850e-47 |
| Msa0047030 | Msa0061290 | 0.804806 | 1.810154e-49 | -8.615850e-47 |
| Msa0047070 | Msa0061290 | 0.804637 | 1.963508e-49 | -8.615850e-47 |
| Msa0052260 | Msa0061290 | 0.807866 | 4.099582e-50 | -8.615850e-47 |
| Msa0054480 | Msa0061290 | 0.834938 | 2.244096e-56 | -8.615850e-47 |
| Msa0061290 | Msa0070700 | 0.834989 | 2.178601e-56 | -8.615850e-47 |
| Msa0061290 | Msa0075220 | 0.823248 | 1.533960e-53 | -8.615850e-47 |
| Msa0061290 | Msa0079380 | 0.878158 | 3.520220e-69 | -8.615850e-47 |
| Msa0061290 | Msa0080090 | 0.804853 | 1.770028e-49 | -8.615850e-47 |
| Msa0061290 | Msa0081090 | 0.824432 | 8.096130e-54 | -8.615850e-47 |
| Msa0061290 | Msa0089630 | 0.826308 | 2.913369e-54 | -8.615850e-47 |
| Msa0061290 | Msa0090330 | 0.803660 | 3.134770e-49 | -8.615850e-47 |
| Msa0061290 | Msa0090400 | 0.802399 | 5.714700e-49 | -8.615850e-47 |
| Msa0061290 | Msa0094140 | 0.804475 | 2.121809e-49 | -8.615850e-47 |
| Msa0061290 | Msa0115080 | 0.976369 | 1.077611e-141 | -8.615850e-47 |
| Msa0061290 | Msa0118590 | 0.818141 | 2.288852e-52 | -8.615850e-47 |
| Msa0061290 | Msa0124060 | 0.823106 | 1.655462e-53 | -8.615850e-47 |
| Msa0061290 | Msa0127050 | 0.850614 | 1.515005e-60 | -8.615850e-47 |
| Msa0061290 | Msa0137880 | 0.806623 | 7.517493e-50 | -8.615850e-47 |
| Msa0061290 | Msa0139060 | 0.809067 | 2.272977e-50 | -8.615850e-47 |
| Msa0061290 | Msa0144370 | 0.830712 | 2.516443e-55 | -8.615850e-47 |
| Msa0061290 | Msa0152350 | 0.989222 | 3.329430e-177 | -8.615850e-47 |
| Msa0061290 | Msa0157290 | 0.814377 | 1.589446e-51 | -8.615850e-47 |
| Msa0061290 | Msa0165210 | 0.800189 | 1.619876e-48 | -8.615850e-47 |
| Msa0061290 | Msa0167520 | 0.834243 | 3.355486e-56 | -8.615850e-47 |
| Msa0061290 | Msa0168500 | 0.810275 | 1.249996e-50 | -8.615850e-47 |
| Msa0061290 | Msa0169310 | 0.841926 | 3.532262e-58 | -8.615850e-47 |
| Msa0061290 | Msa0172070 | 0.882665 | 8.610576e-71 | -8.615850e-47 |
| Msa0061290 | Msa0175780 | 0.808206 | 3.471096e-50 | -8.615850e-47 |
| Msa0061290 | Msa0178560 | 0.811420 | 7.063820e-51 | -8.615850e-47 |
| Msa0061290 | Msa0178610 | 0.823905 | 1.076787e-53 | -8.615850e-47 |
| Msa0061290 | Msa0178660 | 0.821082 | 4.878423e-53 | -8.615850e-47 |
| Msa0061290 | Msa0189010 | 0.843232 | 1.590500e-58 | -8.615850e-47 |
| Msa0061290 | Msa0196500 | -0.814699 | 1.348664e-51 | -8.615850e-47 |
| Msa0061290 | Msa0225760 | 0.805665 | 1.196452e-49 | -8.615850e-47 |
| Msa0061290 | Msa0250000 | 0.822683 | 2.077435e-53 | -8.615850e-47 |
| Msa0061290 | Msa0255090 | 0.805940 | 1.047397e-49 | -8.615850e-47 |
| Msa0061290 | Msa0259380 | 0.805678 | 1.188746e-49 | -8.615850e-47 |
| Msa0061290 | Msa0260610 | 0.812276 | 4.600125e-51 | -8.615850e-47 |
| Msa0061290 | Msa0260670 | 0.807934 | 3.965320e-50 | -8.615850e-47 |
| Msa0061290 | Msa0261340 | 0.805021 | 1.632131e-49 | -8.615850e-47 |
| Msa0061290 | Msa0292400 | 0.818093 | 2.346219e-52 | -8.615850e-47 |
| Msa0061290 | Msa0299870 | 0.802368 | 5.798822e-49 | -8.615850e-47 |
| Msa0061290 | Msa0335730 | 0.800526 | 1.383022e-48 | -8.615850e-47 |
| Msa0061290 | Msa0344040 | 0.819066 | 1.411809e-52 | -8.615850e-47 |
| Msa0061290 | Msa0379770 | 0.818286 | 2.121709e-52 | -8.615850e-47 |
| Msa0061290 | Msa0386090 | 0.816011 | 6.890526e-52 | -8.615850e-47 |
| Msa0061290 | Msa0402650 | 0.814908 | 1.212180e-51 | -8.615850e-47 |
| Msa0061290 | Msa0428080 | 0.801821 | 7.514304e-49 | -8.615850e-47 |
| Msa0061290 | Msa0428150 | 0.814323 | 1.633871e-51 | -8.615850e-47 |
| Msa0061290 | Msa0434350 | 0.803948 | 2.731696e-49 | -8.615850e-47 |
| Msa0061290 | Msa0449210 | 0.807321 | 5.351485e-50 | -8.615850e-47 |
| Msa0061290 | Msa0453210 | 0.814593 | 1.423407e-51 | -8.615850e-47 |
| Msa0061290 | Msa0462500 | 0.813606 | 2.350945e-51 | -8.615850e-47 |
| Msa0061290 | Msa0464680 | 0.816573 | 5.157514e-52 | -8.615850e-47 |
| Msa0061290 | Msa0465410 | 0.863241 | 2.865439e-64 | -8.615850e-47 |
| Msa0061290 | Msa0467490 | 0.825947 | 3.549336e-54 | -8.615850e-47 |
| Msa0061290 | Msa0472550 | 0.821391 | 4.140738e-53 | -8.615850e-47 |
| Msa0061290 | Msa0472620 | 0.810162 | 1.322041e-50 | -8.615850e-47 |
| Msa0061290 | Msa0474520 | 0.819867 | 9.270143e-53 | -8.615850e-47 |
| Msa0061290 | Msa0487800 | 0.810074 | 1.380863e-50 | -8.615850e-47 |
| Msa0061290 | Msa0504210 | 0.800042 | 1.734885e-48 | -8.615850e-47 |
| Msa0061290 | Msa0511270 | 0.867091 | 1.766771e-65 | -8.615850e-47 |
| Msa0061290 | Msa0511370 | 0.847295 | 1.265650e-59 | -8.615850e-47 |
| Msa0061290 | Msa0529890 | 0.832540 | 8.920106e-56 | -8.615850e-47 |
| Msa0061290 | Msa0531180 | 0.811200 | 7.883970e-51 | -8.615850e-47 |
| Msa0061290 | Msa0532070 | 0.840288 | 9.516912e-58 | -8.615850e-47 |
| Msa0061290 | Msa0547900 | 0.844180 | 8.869608e-59 | -8.615850e-47 |
| Msa0061290 | Msa0548170 | 0.812591 | 3.925758e-51 | -8.615850e-47 |
| Msa0061290 | Msa0569200 | 0.855513 | 5.997596e-62 | -8.615850e-47 |
| Msa0061290 | Msa0585560 | 0.823026 | 1.728940e-53 | -8.615850e-47 |
| Msa0061290 | Msa0602880 | 0.840967 | 6.320155e-58 | -8.615850e-47 |
| Msa0061290 | Msa0625720 | 0.834756 | 2.492897e-56 | -8.615850e-47 |
| Msa0061290 | Msa0635550 | 0.809582 | 1.761706e-50 | -8.615850e-47 |
| Msa0061290 | Msa0639430 | 0.824222 | 9.073103e-54 | -8.615850e-47 |
| Msa0061290 | Msa0643940 | 0.831096 | 2.025531e-55 | -8.615850e-47 |
| Msa0061290 | Msa0650020 | 0.836610 | 8.460338e-57 | -8.615850e-47 |
| Msa0061290 | Msa0661650 | 0.848603 | 5.518723e-60 | -8.615850e-47 |
| Msa0061290 | Msa0663390 | 0.807031 | 6.163464e-50 | -8.615850e-47 |
| Msa0061290 | Msa0681250 | 0.819728 | 9.971165e-53 | -8.615850e-47 |
| Msa0061290 | Msa0681270 | 0.831256 | 1.850268e-55 | -8.615850e-47 |
| Msa0061290 | Msa0683470 | 0.802615 | 5.158295e-49 | -8.615850e-47 |
| Msa0061290 | Msa0691980 | 0.860386 | 2.141458e-63 | -8.615850e-47 |
| Msa0061290 | Msa0698920 | 0.817365 | 3.425287e-52 | -8.615850e-47 |
| Msa0061290 | Msa0715700 | 0.811438 | 6.999608e-51 | -8.615850e-47 |
| Msa0061290 | Msa0716830 | 0.848336 | 6.542328e-60 | -8.615850e-47 |
| Msa0061290 | Msa0757830 | 0.810964 | 8.870865e-51 | -8.615850e-47 |
| Msa0061290 | Msa0765910 | 0.808471 | 3.047814e-50 | -8.615850e-47 |
| Msa0061290 | Msa0789980 | 0.826691 | 2.360615e-54 | -8.615850e-47 |
| Msa0061290 | Msa0793800 | 0.818350 | 2.052590e-52 | -8.615850e-47 |
| Msa0061290 | Msa0867480 | 0.800409 | 1.460712e-48 | -8.615850e-47 |
| Msa0061290 | Msa0871270 | 0.801318 | 9.529567e-49 | -8.615850e-47 |
| Msa0061290 | Msa0880140 | 0.808257 | 3.385529e-50 | -8.615850e-47 |
| Msa0061290 | Msa0892120 | 0.836501 | 9.017638e-57 | -8.615850e-47 |
| Msa0061290 | Msa0938220 | 0.819536 | 1.103291e-52 | -8.615850e-47 |
| Msa0061290 | Msa0945110 | 0.804360 | 2.242474e-49 | -8.615850e-47 |
| Msa0061290 | Msa0959360 | 0.800235 | 1.584858e-48 | -8.615850e-47 |
| Msa0061290 | Msa1014540 | 0.817515 | 3.169072e-52 | -8.615850e-47 |
| Msa0061290 | Msa1019640 | 0.807903 | 4.026123e-50 | -8.615850e-47 |
| Msa0061290 | Msa1029250 | 0.806950 | 6.412472e-50 | -8.615850e-47 |
| Msa0061290 | Msa1029490 | 0.818810 | 1.614094e-52 | -8.615850e-47 |
| Msa0061290 | Msa1030800 | 0.844567 | 6.977984e-59 | -8.615850e-47 |
| Msa0061290 | Msa1045140 | 0.818353 | 2.049536e-52 | -8.615850e-47 |
| Msa0061290 | Msa1075650 | 0.835771 | 1.381666e-56 | -8.615850e-47 |
| Msa0061290 | Msa1080500 | 0.800975 | 1.119607e-48 | -8.615850e-47 |
| Msa0061290 | Msa1082810 | 0.827687 | 1.363475e-54 | -8.615850e-47 |
| Msa0061290 | Msa1084960 | 0.813729 | 2.208382e-51 | -8.615850e-47 |
| Msa0061290 | Msa1104370 | 0.812742 | 3.637238e-51 | -8.615850e-47 |
| Msa0061290 | Msa1117170 | 0.818824 | 1.602249e-52 | -8.615850e-47 |
| Msa0061290 | Msa1119940 | 0.855922 | 4.557169e-62 | -8.615850e-47 |
| Msa0061290 | Msa1162270 | 0.829657 | 4.552831e-55 | -8.615850e-47 |
| Msa0061290 | Msa1170670 | 0.837557 | 4.846552e-57 | -8.615850e-47 |
| Msa0061290 | Msa1171710 | 0.870450 | 1.446089e-66 | -8.615850e-47 |
| Msa0061290 | Msa1175440 | 0.832227 | 1.065944e-55 | -8.615850e-47 |
| Msa0061290 | Msa1181910 | 0.805313 | 1.417543e-49 | -8.615850e-47 |
| Msa0061290 | Msa1206050 | 0.802067 | 6.689995e-49 | -8.615850e-47 |
| Msa0061290 | Msa1209460 | 0.831809 | 1.352137e-55 | -8.615850e-47 |
| Msa0061290 | Msa1220280 | 0.822694 | 2.065235e-53 | -8.615850e-47 |
| Msa0061290 | Msa1220380 | 0.818353 | 2.048622e-52 | -8.615850e-47 |
| Msa0061290 | Msa1222850 | 0.846565 | 2.005109e-59 | -8.615850e-47 |
| Msa0061290 | Msa1234310 | 0.806331 | 8.663728e-50 | -8.615850e-47 |
| Msa0061290 | Msa1260320 | 0.800349 | 1.502855e-48 | -8.615850e-47 |
| Msa0061290 | Msa1263750 | 0.842909 | 1.939006e-58 | -8.615850e-47 |
| Msa0061290 | Msa1263790 | 0.842379 | 2.680465e-58 | -8.615850e-47 |
| Msa0061290 | Msa1264190 | 0.807341 | 5.299105e-50 | -8.615850e-47 |
| Msa0061290 | Msa1265890 | 0.827361 | 1.632135e-54 | -8.615850e-47 |
| Msa0061290 | Msa1287460 | 0.804452 | 2.146076e-49 | -8.615850e-47 |
| Msa0061290 | Msa1297230 | 0.806278 | 8.890213e-50 | -8.615850e-47 |
| Msa0061290 | Msa1298820 | 0.841679 | 4.105846e-58 | -8.615850e-47 |
| Msa0061290 | Msa1302830 | 0.847399 | 1.185297e-59 | -8.615850e-47 |
| Msa0061290 | Msa1303480 | 0.806878 | 6.642643e-50 | -8.615850e-47 |
| Msa0061290 | Msa1314630 | 0.846386 | 2.243541e-59 | -8.615850e-47 |
| Msa0061290 | Msa1315710 | 0.801745 | 7.787563e-49 | -8.615850e-47 |
| Msa0061290 | Msa1330410 | 0.866235 | 3.305967e-65 | -8.615850e-47 |
| Msa0061290 | Msa1333080 | 0.815135 | 1.079583e-51 | -8.615850e-47 |
| Msa0061290 | Msa1369120 | 0.802738 | 4.865497e-49 | -8.615850e-47 |
| Msa0061290 | Msa1370010 | 0.858666 | 7.043804e-63 | -8.615850e-47 |
| Msa0061290 | Msa1370720 | 0.834215 | 3.409743e-56 | -8.615850e-47 |
| Msa0061290 | Msa1372230 | 0.820116 | 8.128039e-53 | -8.615850e-47 |
| Msa0061290 | Msa1381610 | 0.806075 | 9.807233e-50 | -8.615850e-47 |
| Msa0061290 | Msa1382620 | 0.810344 | 1.207868e-50 | -8.615850e-47 |
| Msa0061290 | Msa1390440 | 0.803466 | 3.439981e-49 | -8.615850e-47 |
| Msa0061290 | Msa1391770 | 0.826984 | 2.009367e-54 | -8.615850e-47 |
| Msa0061290 | Msa1392240 | 0.837967 | 3.802875e-57 | -8.615850e-47 |
| Msa0061290 | Msa1392780 | 0.806984 | 6.308052e-50 | -8.615850e-47 |
| Msa0061290 | Msa1405930 | 0.832066 | 1.168611e-55 | -8.615850e-47 |
| Msa0061290 | Msa1407220 | 0.808098 | 3.659141e-50 | -8.615850e-47 |
| Msa0061290 | Msa1429150 | 0.800923 | 1.147626e-48 | -8.615850e-47 |
| Msa0061290 | Msa1440560 | 0.814379 | 1.587872e-51 | -8.615850e-47 |
| Msa0061290 | Msa1442210 | 0.822013 | 2.972060e-53 | -8.615850e-47 |
| Msa0061290 | Msa1443760 | 0.835645 | 1.486985e-56 | -8.615850e-47 |
| Msa0061290 | Msa1453740 | 0.808009 | 3.821994e-50 | -8.615850e-47 |
| Msa0061290 | Msa1454140 | 0.803182 | 3.937728e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061290 | MtrunA17_Chr1g0161361 | 93.258 | 534 | 32 | 1 | 1 | 530 | 1 | 534 | 0.0 | 1042 |
| Msa0061290 | MtrunA17_Chr2g0277401 | 36.574 | 432 | 247 | 10 | 8 | 427 | 27 | 443 | 6.83e-85 | 276 |
| Msa0061290 | MtrunA17_Chr1g0171271 | 27.933 | 358 | 239 | 10 | 20 | 365 | 22 | 372 | 4.45e-33 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0061290 | AT2G01730.1 | 70.787 | 534 | 134 | 4 | 1 | 530 | 1 | 516 | 0.0 | 787 |
| Msa0061290 | AT2G01730.2 | 71.398 | 465 | 111 | 4 | 70 | 530 | 1 | 447 | 0.0 | 684 |
| Msa0061290 | AT1G61010.3 | 34.538 | 498 | 297 | 11 | 8 | 494 | 27 | 506 | 1.34e-88 | 287 |
| Msa0061290 | AT1G61010.1 | 34.538 | 498 | 297 | 11 | 8 | 494 | 27 | 506 | 1.34e-88 | 287 |
| Msa0061290 | AT1G61010.2 | 34.538 | 498 | 297 | 11 | 8 | 494 | 27 | 506 | 1.34e-88 | 287 |
| Msa0061290 | AT1G61010.5 | 34.538 | 498 | 297 | 11 | 8 | 494 | 27 | 506 | 1.34e-88 | 287 |
| Msa0061290 | AT1G61010.4 | 34.538 | 498 | 297 | 11 | 8 | 494 | 27 | 506 | 1.34e-88 | 287 |
| Msa0061290 | AT5G23880.1 | 28.691 | 359 | 236 | 10 | 20 | 365 | 22 | 373 | 7.95e-38 | 148 |
Find 125 sgRNAs with CRISPR-Local
Find 674 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAAATTGTTAAGGTTAT+TGG | 0.150822 | 1_2:-19349923 | Msa0061290:intron |
| TAGGTTCATAAATGTGTTTC+TGG | 0.191107 | 1_2:-19347323 | Msa0061290:CDS |
| TGTGTTCTCTTTGCCACTCC+TGG | 0.217465 | 1_2:-19344860 | Msa0061290:CDS |
| TTATTATTTAGATATTTAAT+TGG | 0.240199 | 1_2:-19341962 | Msa0061290:three_prime_UTR |
| AGTATGTGTCTTTAATCTTC+TGG | 0.243543 | 1_2:+19346004 | None:intergenic |
| CATTTCTGAAACTTGAAGTT+TGG | 0.247182 | 1_2:+19342704 | None:intergenic |
| GAGGGAAACAGTTAACATTT+TGG | 0.248514 | 1_2:-19342398 | Msa0061290:three_prime_UTR |
| TTAGTTTACATATTGGTAAA+TGG | 0.280134 | 1_2:-19342501 | Msa0061290:exon |
| AAACTATGTGCTCATAATTT+AGG | 0.286277 | 1_2:-19342063 | Msa0061290:three_prime_UTR |
| ACGTATCACAAGATGCTTAT+AGG | 0.287478 | 1_2:-19346036 | Msa0061290:CDS |
| TATTATTTAGATATTTAATT+GGG | 0.292642 | 1_2:-19341961 | Msa0061290:three_prime_UTR |
| CTTTGATGTTGGAAGACTTT+CGG | 0.307404 | 1_2:-19351643 | Msa0061290:CDS |
| GAAAGGAAATTATGTTATAT+TGG | 0.311710 | 1_2:-19342018 | Msa0061290:three_prime_UTR |
| CACTGACTCTAAAGGGATAA+TGG | 0.318276 | 1_2:-19342927 | Msa0061290:CDS |
| GGAGAATAATAATAATAAAA+AGG | 0.321558 | 1_2:-19342582 | Msa0061290:CDS |
| GTAAATCAAGAATTATTTAT+AGG | 0.333298 | 1_2:-19341938 | Msa0061290:three_prime_UTR |
| TCATCTTCAACTTGAAGTTC+AGG | 0.337544 | 1_2:+19342632 | None:intergenic |
| TTCATATTCACAGTTTGCTT+TGG | 0.338382 | 1_2:+19342297 | None:intergenic |
| GGCTCTTGTGTTTATGATGC+TGG | 0.344795 | 1_2:-19342042 | Msa0061290:three_prime_UTR |
| GCCACTCCTGGGATGATACT+TGG | 0.350356 | 1_2:-19344848 | Msa0061290:CDS |
| CATTGTAGAGCTCTGAGTTA+TGG | 0.362361 | 1_2:-19342251 | Msa0061290:three_prime_UTR |
| TGCACTAGCATAACATGCTT+TGG | 0.366224 | 1_2:+19342884 | None:intergenic |
| GCACTAGCATAACATGCTTT+GGG | 0.369001 | 1_2:+19342885 | None:intergenic |
| CTTACAATTTCGTTGTTTGC+AGG | 0.379227 | 1_2:+19342791 | None:intergenic |
| AAGAGCAGCAGATGGAGTTT+TGG | 0.382873 | 1_2:-19342609 | Msa0061290:CDS |
| GAAAGTGTTGGTTGATCGTC+GGG | 0.383630 | 1_2:-19351621 | Msa0061290:CDS |
| TTCTTACATTCAAAGCTTTG+TGG | 0.383654 | 1_2:-19342432 | Msa0061290:three_prime_UTR |
| TGCAATGTTCTATGTAAAAG+TGG | 0.387426 | 1_2:-19349897 | Msa0061290:CDS |
| GTTCCTATCTACTTCTCATC+AGG | 0.393377 | 1_2:-19346552 | Msa0061290:intron |
| ACGGGGTTTAGTTTACATAT+TGG | 0.398909 | 1_2:-19342508 | Msa0061290:exon |
| CCTTACTTCACTGAAGTTTG+TGG | 0.411080 | 1_2:-19352920 | Msa0061290:CDS |
| TAGAGAAGAAAACGCAGGTT+TGG | 0.415918 | 1_2:-19353472 | Msa0061290:five_prime_UTR |
| GCCGCTCCTAGGTGTCTATC+TGG | 0.418382 | 1_2:+19349833 | None:intergenic |
| CTTACTTCACTGAAGTTTGT+GGG | 0.419379 | 1_2:-19352919 | Msa0061290:CDS |
| CTTATTCCAACATTTGCTCT+TGG | 0.425564 | 1_2:-19347287 | Msa0061290:CDS |
| AATGGTTGCACAGCACTTGC+AGG | 0.425789 | 1_2:+19353356 | None:intergenic |
| CGCACATCTATCTGAGTATC+GGG | 0.431971 | 1_2:+19343978 | None:intergenic |
| TAACAGATTCTCATTCCATC+TGG | 0.433595 | 1_2:+19342210 | None:intergenic |
| GTGTTCTCTTTGCCACTCCT+GGG | 0.435665 | 1_2:-19344859 | Msa0061290:CDS |
| CTTCTTACTCAGTTATAAGA+AGG | 0.438009 | 1_2:+19349786 | None:intergenic |
| TGAAAATACATACGGCTTTG+AGG | 0.440006 | 1_2:+19348918 | None:intergenic |
| GTCCTCACACTGACTCTAAA+GGG | 0.442382 | 1_2:-19342934 | Msa0061290:CDS |
| AATTTCGTTGTTTGCAGGAT+GGG | 0.443574 | 1_2:+19342796 | None:intergenic |
| ACGTATCGTAGTTGCATAAG+TGG | 0.451707 | 1_2:+19348970 | None:intergenic |
| AAACCTGATGAGAAGTAGAT+AGG | 0.452202 | 1_2:+19346549 | None:intergenic |
| ATAGAATTGATTCTGAATTG+AGG | 0.461931 | 1_2:-19342829 | Msa0061290:CDS |
| AGTCCTCACACTGACTCTAA+AGG | 0.462808 | 1_2:-19342935 | Msa0061290:CDS |
| TTGATGTTGGTGCAGTCACT+TGG | 0.464421 | 1_2:-19352960 | Msa0061290:intron |
| TAACTGTTTCCCTCGAGATC+AGG | 0.465353 | 1_2:+19342407 | None:intergenic |
| GATTGCCATTGATGATGTAA+TGG | 0.465807 | 1_2:+19353338 | None:intergenic |
| CATAATATGCACGTATCTGC+AGG | 0.468751 | 1_2:+19351039 | None:intergenic |
| AGTTTGCTTTGGTTGTACTT+TGG | 0.471698 | 1_2:+19342308 | None:intergenic |
| CTGGGAGCGCATGAATTTGA+AGG | 0.471772 | 1_2:-19346574 | Msa0061290:CDS |
| CATAAATGTGTTTCTGGAGG+AGG | 0.473029 | 1_2:-19347317 | Msa0061290:CDS |
| GGGATCTGTATCAACTTTGG+TGG | 0.484392 | 1_2:+19343998 | None:intergenic |
| AGCTTTGTCTCCTTTGATGT+TGG | 0.487734 | 1_2:-19351654 | Msa0061290:CDS |
| GCAGGTGCTGGTCAAGAAGT+TGG | 0.488494 | 1_2:-19353215 | Msa0061290:intron |
| AAAAGTGGGAGACGCAGAAA+TGG | 0.495259 | 1_2:-19349882 | Msa0061290:CDS |
| GACGCAGAAATGGTTTATAC+AGG | 0.495611 | 1_2:-19349872 | Msa0061290:CDS |
| AGGTCTATGTTAGATGCTCC+TGG | 0.498744 | 1_2:-19344887 | Msa0061290:CDS |
| AGAAGAAAACGCAGGTTTGG+AGG | 0.499129 | 1_2:-19353469 | Msa0061290:intron |
| GGAAAGTGTTGGTTGATCGT+CGG | 0.500379 | 1_2:-19351622 | Msa0061290:CDS |
| TTATTGACAGATTCATCAGT+TGG | 0.504762 | 1_2:-19342963 | Msa0061290:intron |
| TATTGTATGGCTGGAACTGT+AGG | 0.504776 | 1_2:-19344044 | Msa0061290:CDS |
| CACAGTCTGCTTCAAATCTA+CGG | 0.509906 | 1_2:+19351076 | None:intergenic |
| CAATTTCGTTGTTTGCAGGA+TGG | 0.510023 | 1_2:+19342795 | None:intergenic |
| CGAAAGTCTTCCAACATCAA+AGG | 0.514799 | 1_2:+19351644 | None:intergenic |
| ATTTGCTCTTGGAAGAGCTC+AGG | 0.515179 | 1_2:-19347276 | Msa0061290:intron |
| TCAGATAGATGTGCGTTGCC+AGG | 0.518989 | 1_2:-19343970 | Msa0061290:intron |
| ACGCACATCTATCTGAGTAT+CGG | 0.521836 | 1_2:+19343977 | None:intergenic |
| CCACAAACTTCAGTGAAGTA+AGG | 0.522094 | 1_2:+19352920 | None:intergenic |
| ATATACCTAAAACTAGAGCT+TGG | 0.522967 | 1_2:+19353316 | None:intergenic |
| AAAATCTTGTCGCTTTGCCT+GGG | 0.523181 | 1_2:-19344781 | Msa0061290:intron |
| CTTTGTGGTGCCTGATCTCG+AGG | 0.524870 | 1_2:-19342417 | Msa0061290:three_prime_UTR |
| ATCGGGATCTGTATCAACTT+TGG | 0.527660 | 1_2:+19343995 | None:intergenic |
| GGATCTGTATCAACTTTGGT+GGG | 0.527910 | 1_2:+19343999 | None:intergenic |
| ATTACTGAGTGCATGAAGAA+AGG | 0.528301 | 1_2:-19351569 | Msa0061290:intron |
| GATCAATTTGAGCCGCTCCT+AGG | 0.528508 | 1_2:+19349822 | None:intergenic |
| GTTTACATATTGGTAAATGG+TGG | 0.530895 | 1_2:-19342498 | Msa0061290:three_prime_UTR |
| GTTGGTTGATCGTCGGGGTG+AGG | 0.531692 | 1_2:-19351615 | Msa0061290:CDS |
| CAGATACGTGCATATTATGC+AGG | 0.531738 | 1_2:-19351035 | Msa0061290:CDS |
| TGCAACCATTACATCATCAA+TGG | 0.531807 | 1_2:-19353343 | Msa0061290:exon |
| ATCACAAGATGCTTATAGGT+TGG | 0.532804 | 1_2:-19346032 | Msa0061290:CDS |
| TGTGTAATAGTCAAAATCAA+TGG | 0.533569 | 1_2:-19353185 | Msa0061290:CDS |
| TTCAAAATGCGCTCGAGAGA+GGG | 0.542927 | 1_2:-19348945 | Msa0061290:CDS |
| GTAGGGCATAAATTAACGTC+AGG | 0.553447 | 1_2:-19344026 | Msa0061290:CDS |
| GACGCTTCTGCATTTACGTA+CGG | 0.556744 | 1_2:+19342755 | None:intergenic |
| GAAGATGAAAGAGCAGCAGA+TGG | 0.556757 | 1_2:-19342617 | Msa0061290:CDS |
| ATTCAAAATGCGCTCGAGAG+AGG | 0.557482 | 1_2:-19348946 | Msa0061290:CDS |
| TGTTGGACGAAAAGAAGCAC+GGG | 0.558183 | 1_2:-19342526 | Msa0061290:CDS |
| GTGTTTATGATGCTGGAGAA+AGG | 0.558298 | 1_2:-19342035 | Msa0061290:three_prime_UTR |
| AAGCAAACTGTGAATATGAA+AGG | 0.561293 | 1_2:-19342294 | Msa0061290:three_prime_UTR |
| TGCAGTCACTTGGATCATGT+TGG | 0.565848 | 1_2:-19352950 | Msa0061290:intron |
| ATGTGTTTCTGGAGGAGGAA+AGG | 0.566477 | 1_2:-19347312 | Msa0061290:CDS |
| ATTATTTAGATATTTAATTG+GGG | 0.572584 | 1_2:-19341960 | Msa0061290:three_prime_UTR |
| GCATGGTGAGAAGCCTAAGA+TGG | 0.575124 | 1_2:-19342864 | Msa0061290:CDS |
| TGTGAATATGAAAGGTTGCA+AGG | 0.579136 | 1_2:-19342286 | Msa0061290:three_prime_UTR |
| TTGTTTGCAGGATGGGAACA+CGG | 0.580061 | 1_2:+19342803 | None:intergenic |
| GCTCTTCCAAGAGCAAATGT+TGG | 0.581537 | 1_2:+19347281 | None:intergenic |
| GCAAAGAGAACACAAGGACC+AGG | 0.582633 | 1_2:+19344869 | None:intergenic |
| ACTCCTGGGATGATACTTGG+TGG | 0.584099 | 1_2:-19344845 | Msa0061290:CDS |
| GTTCATAAATGTGTTTCTGG+AGG | 0.584756 | 1_2:-19347320 | Msa0061290:CDS |
| ATTGTATGGCTGGAACTGTA+GGG | 0.588783 | 1_2:-19344043 | Msa0061290:CDS |
| GCAATGTTCTATGTAAAAGT+GGG | 0.592359 | 1_2:-19349896 | Msa0061290:CDS |
| GTTTCAGAAATGCAGTTCAG+TGG | 0.592784 | 1_2:-19342693 | Msa0061290:CDS |
| GGAAGACTTTCGGAAAGTGT+TGG | 0.601038 | 1_2:-19351633 | Msa0061290:CDS |
| CTGCAGTTCACAAATTTGAG+AGG | 0.608297 | 1_2:-19344907 | Msa0061290:intron |
| AATCCACCAAGTATCATCCC+AGG | 0.609445 | 1_2:+19344842 | None:intergenic |
| CACTAGCATAACATGCTTTG+GGG | 0.609757 | 1_2:+19342886 | None:intergenic |
| ACTGAAGTTTGTGGGTACAG+TGG | 0.613961 | 1_2:-19352911 | Msa0061290:CDS |
| ATGTTGGACGAAAAGAAGCA+CGG | 0.614169 | 1_2:-19342527 | Msa0061290:CDS |
| ACCAAGTATCATCCCAGGAG+TGG | 0.615613 | 1_2:+19344847 | None:intergenic |
| AAAATCAAATGCATTATGTG+TGG | 0.616999 | 1_2:+19345981 | None:intergenic |
| AAGACAATCATGTTCGATTG+CGG | 0.620905 | 1_2:-19353161 | Msa0061290:CDS |
| TGAATTAACAGAGCACCAGA+TGG | 0.620916 | 1_2:-19342225 | Msa0061290:three_prime_UTR |
| ATCCCTTTAGAGTCAGTGTG+AGG | 0.643471 | 1_2:+19342932 | None:intergenic |
| GGAGTGGCAAAGAGAACACA+AGG | 0.643913 | 1_2:+19344863 | None:intergenic |
| ATGACACCAGATAGACACCT+AGG | 0.654218 | 1_2:-19349839 | Msa0061290:CDS |
| ACCAGATAGACACCTAGGAG+CGG | 0.694856 | 1_2:-19349834 | Msa0061290:CDS |
| TTTGTGGTGCCTGATCTCGA+GGG | 0.695575 | 1_2:-19342416 | Msa0061290:three_prime_UTR |
| AAGCATGTTATGCTAGTGCA+TGG | 0.700149 | 1_2:-19342881 | Msa0061290:CDS |
| TGCTTCAAAAGAGAGATGCG+CGG | 0.704215 | 1_2:+19342351 | None:intergenic |
| ACGTTTAGAGAAGAAAACGC+AGG | 0.713642 | 1_2:-19353477 | Msa0061290:five_prime_UTR |
| AAAGTGTTGGTTGATCGTCG+GGG | 0.731605 | 1_2:-19351620 | Msa0061290:CDS |
| GTTGGACGAAAAGAAGCACG+GGG | 0.747830 | 1_2:-19342525 | Msa0061290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTATTTGTTATTATTTT+CGG | - | chr1_2:19342819-19342838 | Msa0061290:CDS | 10.0% |
| !! | TAAGAATTAATAACTAATAA+GGG | + | chr1_2:19343292-19343311 | None:intergenic | 10.0% |
| !! | TTCCTATTTAATTAATTTAA+GGG | + | chr1_2:19343508-19343527 | None:intergenic | 10.0% |
| !! | TTTCCTATTTAATTAATTTA+AGG | + | chr1_2:19343509-19343528 | None:intergenic | 10.0% |
| !! | TTAAACTATATTAAGATATT+TGG | + | chr1_2:19348543-19348562 | None:intergenic | 10.0% |
| !! | AGTTTAAGTAAAATTAAAAT+AGG | - | chr1_2:19348556-19348575 | Msa0061290:intron | 10.0% |
| !!! | TATCAATATCATTTTATTTT+TGG | + | chr1_2:19348596-19348615 | None:intergenic | 10.0% |
| !! | CTTTATAAGTAAATTTAATT+TGG | + | chr1_2:19350390-19350409 | None:intergenic | 10.0% |
| !! | TAAAGAAAAAGAATATAAAT+GGG | + | chr1_2:19350700-19350719 | None:intergenic | 10.0% |
| !! | ACAATTTATTTAAGAAAAAA+AGG | - | chr1_2:19352399-19352418 | Msa0061290:intron | 10.0% |
| !! | ATTATTTAGATATTTAATTG+GGG | - | chr1_2:19353491-19353510 | Msa0061290:five_prime_UTR | 10.0% |
| !! | AAATTATTTGAAAAAGCTTA+TGG | + | chr1_2:19343063-19343082 | None:intergenic | 15.0% |
| !! | CTAAGAATTAATAACTAATA+AGG | + | chr1_2:19343293-19343312 | None:intergenic | 15.0% |
| !! | AACCCTTAAATTAATTAAAT+AGG | - | chr1_2:19343503-19343522 | Msa0061290:intron | 15.0% |
| !! | TGAAATTTCAAATTTATACA+AGG | - | chr1_2:19343557-19343576 | Msa0061290:intron | 15.0% |
| !!! | GATGTACAATTATTATTTTT+TGG | - | chr1_2:19344965-19344984 | Msa0061290:intron | 15.0% |
| !!! | ACAATTATTATTTTTTGGAA+TGG | - | chr1_2:19344970-19344989 | Msa0061290:intron | 15.0% |
| !!! | ACATTAATATTTTGTAATTC+AGG | - | chr1_2:19345403-19345422 | Msa0061290:intron | 15.0% |
| !! | TTATAAATTGTTAAGGTTAT+TGG | - | chr1_2:19345528-19345547 | Msa0061290:intron | 15.0% |
| !! | TTTACATGTTTATTGTTTAT+AGG | - | chr1_2:19345761-19345780 | Msa0061290:intron | 15.0% |
| !! | TTACATGTTTATTGTTTATA+GGG | - | chr1_2:19345762-19345781 | Msa0061290:intron | 15.0% |
| !! | TTTAATCGAAAAAATGAAAT+TGG | + | chr1_2:19346179-19346198 | None:intergenic | 15.0% |
| !! | ATAACAAGATTAACAAATTA+AGG | + | chr1_2:19346213-19346232 | None:intergenic | 15.0% |
| !! | ATGTTCAATTATACAAATTA+GGG | + | chr1_2:19346244-19346263 | None:intergenic | 15.0% |
| !! | TATGTTCAATTATACAAATT+AGG | + | chr1_2:19346245-19346264 | None:intergenic | 15.0% |
| !!! | TAATTTGTATAATTGAACAT+AGG | - | chr1_2:19346244-19346263 | Msa0061290:intron | 15.0% |
| !! | GTTTCTTCAATATTTAATAA+TGG | - | chr1_2:19346348-19346367 | Msa0061290:intron | 15.0% |
| !! | TATTTAATAATGGTTCATTA+TGG | - | chr1_2:19346358-19346377 | Msa0061290:intron | 15.0% |
| !! | TATATATAGCTAATAAACTT+GGG | + | chr1_2:19347111-19347130 | None:intergenic | 15.0% |
| !! | TTATATATAGCTAATAAACT+TGG | + | chr1_2:19347112-19347131 | None:intergenic | 15.0% |
| !! | CTATATATAACTGTTTAATA+GGG | - | chr1_2:19347122-19347141 | Msa0061290:intron | 15.0% |
| !! | AACAACTTTATTAGAATATT+TGG | - | chr1_2:19347151-19347170 | Msa0061290:intron | 15.0% |
| !!! | AACTTCAAATTAATTGATTT+AGG | - | chr1_2:19348109-19348128 | Msa0061290:intron | 15.0% |
| !!! | TTTTGATAAAGAAAAAGTAA+GGG | + | chr1_2:19348479-19348498 | None:intergenic | 15.0% |
| !!! | TTTTTGATAAAGAAAAAGTA+AGG | + | chr1_2:19348480-19348499 | None:intergenic | 15.0% |
| !!! | TACTTTTTCTTTATCAAAAA+TGG | - | chr1_2:19348480-19348499 | Msa0061290:intron | 15.0% |
| !!! | TTGATATTTTTTTCAATGTT+TGG | - | chr1_2:19348610-19348629 | Msa0061290:intron | 15.0% |
| !! | GATGAAAATTAAAAATTCAT+AGG | + | chr1_2:19349212-19349231 | None:intergenic | 15.0% |
| !!! | TTAATTTTCATCATTGATTT+AGG | - | chr1_2:19349220-19349239 | Msa0061290:intron | 15.0% |
| !!! | ATAGCAATAAAGTTATTTTT+TGG | - | chr1_2:19349250-19349269 | Msa0061290:intron | 15.0% |
| !!! | TTTTTTTGTTGTTAGAAAAA+TGG | + | chr1_2:19349662-19349681 | None:intergenic | 15.0% |
| !! | TTAAATATGTGATATAATGA+TGG | - | chr1_2:19350256-19350275 | Msa0061290:intron | 15.0% |
| !! | GTAAAGAAAAAGAATATAAA+TGG | + | chr1_2:19350701-19350720 | None:intergenic | 15.0% |
| !! | CATAAAGAAAAATAATACTA+GGG | + | chr1_2:19351306-19351325 | None:intergenic | 15.0% |
| !! | ACATAAAGAAAAATAATACT+AGG | + | chr1_2:19351307-19351326 | None:intergenic | 15.0% |
| !! | AAATTTCCTTGTAAATAAAA+GGG | + | chr1_2:19351523-19351542 | None:intergenic | 15.0% |
| !! | TAAATTTCCTTGTAAATAAA+AGG | + | chr1_2:19351524-19351543 | None:intergenic | 15.0% |
| !! | AAATAAGTAAATTAAAAAGC+AGG | - | chr1_2:19351622-19351641 | Msa0061290:CDS | 15.0% |
| !! | TCTAACTATATAGATTTATT+AGG | + | chr1_2:19352003-19352022 | None:intergenic | 15.0% |
| !! | GGAGAATAATAATAATAAAA+AGG | - | chr1_2:19352869-19352888 | Msa0061290:intron | 15.0% |
| !! | GTAAATCAAGAATTATTTAT+AGG | - | chr1_2:19353513-19353532 | Msa0061290:five_prime_UTR | 15.0% |
| !! | ATTTCAAATTTATACAAGGA+AGG | - | chr1_2:19343561-19343580 | Msa0061290:intron | 20.0% |
| !!! | GTTTTTGTATTAACATTTGT+TGG | - | chr1_2:19343623-19343642 | Msa0061290:intron | 20.0% |
| !! | TCAAGCAAAATTTATTATTG+TGG | + | chr1_2:19343745-19343764 | None:intergenic | 20.0% |
| !!! | TTTTTGTAGTATCTATATGT+TGG | - | chr1_2:19343925-19343944 | Msa0061290:intron | 20.0% |
| !!! | AGATTTAACACATGTTATTT+TGG | - | chr1_2:19344492-19344511 | Msa0061290:intron | 20.0% |
| !!! | GAATTTTTGTGTAAATAAGA+TGG | - | chr1_2:19344542-19344561 | Msa0061290:intron | 20.0% |
| !!! | TTCTGATTTGACAATTTTTT+CGG | + | chr1_2:19344582-19344601 | None:intergenic | 20.0% |
| !! | TATTCTGTTTATGTTATGTA+TGG | + | chr1_2:19344606-19344625 | None:intergenic | 20.0% |
| !! | TTAAGTTTAACTAAAAGATC+AGG | + | chr1_2:19345210-19345229 | None:intergenic | 20.0% |
| !! | AGTACTAAAATATCAATTCA+AGG | + | chr1_2:19345481-19345500 | None:intergenic | 20.0% |
| !! | TATAATAAAAATAGGCTGAA+TGG | + | chr1_2:19345513-19345532 | None:intergenic | 20.0% |
| !! | GGTTAAATAAAGAAAAATGA+GGG | + | chr1_2:19346158-19346177 | None:intergenic | 20.0% |
| !! | TGGTTAAATAAAGAAAAATG+AGG | + | chr1_2:19346159-19346178 | None:intergenic | 20.0% |
| !!! | CTAGAAGTGTTTATTTAATT+TGG | - | chr1_2:19346579-19346598 | Msa0061290:CDS | 20.0% |
| !!! | AAGATTTCTGAGATAAAATA+AGG | + | chr1_2:19346607-19346626 | None:intergenic | 20.0% |
| !! | ATAGTTATTACAAAGAAACA+GGG | - | chr1_2:19346795-19346814 | Msa0061290:intron | 20.0% |
| !!! | AAGTAAAATGAGTTTTTTCT+AGG | + | chr1_2:19346942-19346961 | None:intergenic | 20.0% |
| !! | GCTATATATAACTGTTTAAT+AGG | - | chr1_2:19347121-19347140 | Msa0061290:intron | 20.0% |
| !!! | GAAATTAAAAAACGTTTTCT+CGG | + | chr1_2:19347193-19347212 | None:intergenic | 20.0% |
| !!! | CTAAAACCAAAATATTTTCA+AGG | - | chr1_2:19347749-19347768 | Msa0061290:intron | 20.0% |
| !!! | AAAAAGCATGTGATAATATT+TGG | + | chr1_2:19348970-19348989 | None:intergenic | 20.0% |
| !! | TCAAAAATAAAAGAAAGAAG+TGG | - | chr1_2:19349135-19349154 | Msa0061290:intron | 20.0% |
| !! | TTCTACTAACTATTTGAATA+TGG | - | chr1_2:19349356-19349375 | Msa0061290:intron | 20.0% |
| !!! | AATGCATTTGATTTTAAGAA+TGG | - | chr1_2:19349478-19349497 | Msa0061290:intron | 20.0% |
| !! | CTAAATGATTATGAGATTTA+AGG | - | chr1_2:19349799-19349818 | Msa0061290:CDS | 20.0% |
| !!! | ATGATAGATATTTTCATATC+TGG | - | chr1_2:19350148-19350167 | Msa0061290:intron | 20.0% |
| !!! | AGAAAAAAGCTTTAGTAAAT+TGG | - | chr1_2:19350201-19350220 | Msa0061290:intron | 20.0% |
| !!! | AAAATGCTTTTAAGTTCTAT+TGG | - | chr1_2:19350344-19350363 | Msa0061290:intron | 20.0% |
| !! | AGCTACTATAAAAGTTAAAA+AGG | + | chr1_2:19350730-19350749 | None:intergenic | 20.0% |
| !!! | GTATCACATTTAAAAGTATA+TGG | - | chr1_2:19350805-19350824 | Msa0061290:intron | 20.0% |
| !! | GCATATACAAGTAAATAAAT+CGG | - | chr1_2:19351588-19351607 | Msa0061290:CDS | 20.0% |
| !!! | ATTTACTTATTTTGATCAGT+AGG | + | chr1_2:19351614-19351633 | None:intergenic | 20.0% |
| !! | AAACAATCAACATAGAAATA+TGG | + | chr1_2:19351752-19351771 | None:intergenic | 20.0% |
| !! | TTAGTTTACATATTGGTAAA+TGG | - | chr1_2:19352950-19352969 | Msa0061290:intron | 20.0% |
| !!! | TTTTGAAGCATTATTGTTTT+AGG | - | chr1_2:19353113-19353132 | Msa0061290:CDS | 20.0% |
| !! | GAAAGGAAATTATGTTATAT+TGG | - | chr1_2:19353433-19353452 | Msa0061290:intron | 20.0% |
| ! | TGTGTAATAGTCAAAATCAA+TGG | - | chr1_2:19342266-19342285 | Msa0061290:three_prime_UTR | 25.0% |
| ! | TTATTCAATGAAGTCAATGT+AGG | - | chr1_2:19342667-19342686 | Msa0061290:CDS | 25.0% |
| ! | TTCTTAGATGTACTCAAATT+AGG | - | chr1_2:19342884-19342903 | Msa0061290:CDS | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | + | chr1_2:19342910-19342929 | None:intergenic | 25.0% |
| ! | CGTTTATCATTTAAGTGTTT+AGG | - | chr1_2:19342935-19342954 | Msa0061290:CDS | 25.0% |
| ! | AAAGTAATGCTAAGTTTAAC+AGG | - | chr1_2:19343473-19343492 | Msa0061290:intron | 25.0% |
| !! | ATGTTGTAATTTTTGCTTGA+TGG | - | chr1_2:19343655-19343674 | Msa0061290:intron | 25.0% |
| !! | TGTTGTAATTTTTGCTTGAT+GGG | - | chr1_2:19343656-19343675 | Msa0061290:intron | 25.0% |
| ! | AGATACTACAAAAAGTAAAG+AGG | + | chr1_2:19343919-19343938 | None:intergenic | 25.0% |
| ! | TACATGATATATATTGTAGC+TGG | - | chr1_2:19343986-19344005 | Msa0061290:CDS | 25.0% |
| ! | TGTTAAATCTATTACTGCAA+AGG | + | chr1_2:19344482-19344501 | None:intergenic | 25.0% |
| ! | AAAATTCACAAGAACTTCTA+TGG | + | chr1_2:19344529-19344548 | None:intergenic | 25.0% |
| ! | ACTTTATTGTAAGCAAAAGT+AGG | + | chr1_2:19345050-19345069 | None:intergenic | 25.0% |
| !! | ATAACTCGTAATTTTATACG+AGG | - | chr1_2:19345371-19345390 | Msa0061290:intron | 25.0% |
| ! | TAGAAATATGAACCAATCAT+TGG | - | chr1_2:19345842-19345861 | Msa0061290:intron | 25.0% |
| ! | TCCAAAAATCTAACTAGTTA+GGG | + | chr1_2:19345873-19345892 | None:intergenic | 25.0% |
| ! | TTCCAAAAATCTAACTAGTT+AGG | + | chr1_2:19345874-19345893 | None:intergenic | 25.0% |
| !!! | TAGTTAGATTTTTGGAAAGT+TGG | - | chr1_2:19345877-19345896 | Msa0061290:intron | 25.0% |
| ! | ACATAAAGGTTGAAGTAATA+AGG | + | chr1_2:19346065-19346084 | None:intergenic | 25.0% |
| ! | ACAAGATTAACAAATTAAGG+TGG | + | chr1_2:19346210-19346229 | None:intergenic | 25.0% |
| ! | GTAAGTTGTAAACATAACAA+TGG | + | chr1_2:19346296-19346315 | None:intergenic | 25.0% |
| ! | TGTTATGTTTACAACTTACA+AGG | - | chr1_2:19346297-19346316 | Msa0061290:intron | 25.0% |
| !!! | GCAAGTTTTGAAAATACATA+CGG | + | chr1_2:19346544-19346563 | None:intergenic | 25.0% |
| ! | GTCAACTTCAAATATAACTA+AGG | + | chr1_2:19346671-19346690 | None:intergenic | 25.0% |
| !! | TTATATTTGAAGTTGACCTT+TGG | - | chr1_2:19346674-19346693 | Msa0061290:intron | 25.0% |
| ! | GATAGTTATTACAAAGAAAC+AGG | - | chr1_2:19346794-19346813 | Msa0061290:intron | 25.0% |
| ! | TAGTTATTACAAAGAAACAG+GGG | - | chr1_2:19346796-19346815 | Msa0061290:intron | 25.0% |
| ! | AGAGTCTATATTGTAATCAA+GGG | + | chr1_2:19346829-19346848 | None:intergenic | 25.0% |
| ! | TAGAGTCTATATTGTAATCA+AGG | + | chr1_2:19346830-19346849 | None:intergenic | 25.0% |
| ! | ATGTGTAAATAATAGAAGAG+AGG | + | chr1_2:19347061-19347080 | None:intergenic | 25.0% |
| ! | TCTATTATTTACACATACTG+TGG | - | chr1_2:19347065-19347084 | Msa0061290:intron | 25.0% |
| ! | ATATTTGGACCAAGTTTATT+TGG | - | chr1_2:19347166-19347185 | Msa0061290:intron | 25.0% |
| !!! | TTTGTTTTGAAAGATTTGTG+TGG | - | chr1_2:19347271-19347290 | Msa0061290:intron | 25.0% |
| ! | TCTACAAATCTATGAAAACA+GGG | - | chr1_2:19347332-19347351 | Msa0061290:intron | 25.0% |
| ! | TCCTAAAACAATAAAACAAG+GGG | + | chr1_2:19347604-19347623 | None:intergenic | 25.0% |
| ! | CTCCTAAAACAATAAAACAA+GGG | + | chr1_2:19347605-19347624 | None:intergenic | 25.0% |
| !!! | CTTGTTTTATTGTTTTAGGA+GGG | - | chr1_2:19347604-19347623 | Msa0061290:intron | 25.0% |
| ! | AAATGAAAAGATGATAGCAT+AGG | + | chr1_2:19347643-19347662 | None:intergenic | 25.0% |
| ! | CATTTCTTTGTTCTTAAATG+AGG | - | chr1_2:19347877-19347896 | Msa0061290:intron | 25.0% |
| ! | CTTTCTTCCAAATTAAAACA+AGG | + | chr1_2:19347906-19347925 | None:intergenic | 25.0% |
| ! | ATCTACAATTACTCTTATGT+TGG | - | chr1_2:19348080-19348099 | Msa0061290:intron | 25.0% |
| ! | AAATCCAGCATAAAACATTA+AGG | + | chr1_2:19348407-19348426 | None:intergenic | 25.0% |
| ! | TTTGAATTTCGATAGCTAAA+CGG | + | chr1_2:19348773-19348792 | None:intergenic | 25.0% |
| ! | ACCAAGTTATTATGATATGT+AGG | - | chr1_2:19348829-19348848 | Msa0061290:intron | 25.0% |
| ! | TCCTACATATCATAATAACT+TGG | + | chr1_2:19348833-19348852 | None:intergenic | 25.0% |
| ! | AAAATAAAAGAAAGAAGTGG+AGG | - | chr1_2:19349138-19349157 | Msa0061290:intron | 25.0% |
| ! | AAATAAAAGAAAGAAGTGGA+GGG | - | chr1_2:19349139-19349158 | Msa0061290:intron | 25.0% |
| !!! | ATATGGATTTTTTTTCTTCC+AGG | - | chr1_2:19349373-19349392 | Msa0061290:intron | 25.0% |
| ! | AAAATCAAATGCATTATGTG+TGG | + | chr1_2:19349473-19349492 | None:intergenic | 25.0% |
| ! | TTTATACCAACTAACTGTAA+AGG | + | chr1_2:19349767-19349786 | None:intergenic | 25.0% |
| ! | CTAAAATAATGATAGTTGAC+TGG | - | chr1_2:19349958-19349977 | Msa0061290:intron | 25.0% |
| ! | CATCTATAAAATTACAAGAG+AGG | - | chr1_2:19350049-19350068 | Msa0061290:intron | 25.0% |
| !!! | GTAAATTGGTTTAGTTTTTG+AGG | - | chr1_2:19350215-19350234 | Msa0061290:intron | 25.0% |
| ! | ACATGTTTATCAAAGTTAGA+GGG | + | chr1_2:19350291-19350310 | None:intergenic | 25.0% |
| ! | TACATGTTTATCAAAGTTAG+AGG | + | chr1_2:19350292-19350311 | None:intergenic | 25.0% |
| ! | TTGTTCATCTTCTATCTAAT+CGG | + | chr1_2:19350756-19350775 | None:intergenic | 25.0% |
| ! | TCAAAATACACTTAACTACT+AGG | + | chr1_2:19350856-19350875 | None:intergenic | 25.0% |
| !!! | CTTCATTTAGTTTTTCTCAT+TGG | + | chr1_2:19351245-19351264 | None:intergenic | 25.0% |
| ! | CAATGAGAAAAACTAAATGA+AGG | - | chr1_2:19351243-19351262 | Msa0061290:intron | 25.0% |
| ! | AGAAAAACTAAATGAAGGTT+TGG | - | chr1_2:19351248-19351267 | Msa0061290:intron | 25.0% |
| !! | TTTCTATGTTGATTGTTTGT+TGG | - | chr1_2:19351754-19351773 | Msa0061290:intron | 25.0% |
| ! | CTATTCAATTCTGTGATAAA+TGG | + | chr1_2:19351894-19351913 | None:intergenic | 25.0% |
| ! | ATGGACAAAATTTGTAACAA+CGG | + | chr1_2:19352163-19352182 | None:intergenic | 25.0% |
| !! | TGTTACAAATTTTGTCCATA+AGG | - | chr1_2:19352164-19352183 | Msa0061290:intron | 25.0% |
| ! | ATACTTAAAGTGATGATACA+AGG | - | chr1_2:19352187-19352206 | Msa0061290:intron | 25.0% |
| ! | ACTATATCTTTCAATCTTTG+AGG | - | chr1_2:19352223-19352242 | Msa0061290:intron | 25.0% |
| ! | CTATATCTTTCAATCTTTGA+GGG | - | chr1_2:19352224-19352243 | Msa0061290:intron | 25.0% |
| ! | AATTCTTCAGAAGACTTATA+TGG | - | chr1_2:19352264-19352283 | Msa0061290:intron | 25.0% |
| !! | ATAGAATTGATTCTGAATTG+AGG | - | chr1_2:19352622-19352641 | Msa0061290:intron | 25.0% |
| ! | AAACTATGTGCTCATAATTT+AGG | - | chr1_2:19353388-19353407 | Msa0061290:five_prime_UTR | 25.0% |
| ATATACCTAAAACTAGAGCT+TGG | + | chr1_2:19342138-19342157 | None:intergenic | 30.0% | |
| ATCAATTTCAATAAACGTGC+AGG | - | chr1_2:19342218-19342237 | Msa0061290:three_prime_UTR | 30.0% | |
| !!! | TTTTGAAATCAGGAAAACGA+CGG | + | chr1_2:19342340-19342359 | None:intergenic | 30.0% |
| !!! | CGTGAAATCTTTTTGAAATC+AGG | + | chr1_2:19342350-19342369 | None:intergenic | 30.0% |
| TTCAAAAAGATTTCACGAAC+TGG | - | chr1_2:19342353-19342372 | Msa0061290:three_prime_UTR | 30.0% | |
| TCAAAAAGATTTCACGAACT+GGG | - | chr1_2:19342354-19342373 | Msa0061290:three_prime_UTR | 30.0% | |
| ! | TTTGATGTTGTTGTTGATGT+TGG | - | chr1_2:19342478-19342497 | Msa0061290:three_prime_UTR | 30.0% |
| CATTTCATCAAACAGGTAAT+AGG | + | chr1_2:19342590-19342609 | None:intergenic | 30.0% | |
| AGTCAAACATTTCATCAAAC+AGG | + | chr1_2:19342597-19342616 | None:intergenic | 30.0% | |
| TTTATCAGGTGAAATCAATG+CGG | + | chr1_2:19342734-19342753 | None:intergenic | 30.0% | |
| !! | TTCAGTAATGTTTTTGCTAG+TGG | - | chr1_2:19343081-19343100 | Msa0061290:intron | 30.0% |
| !!! | TGTTTTGATGATTGTGTGAA+AGG | - | chr1_2:19343242-19343261 | Msa0061290:intron | 30.0% |
| AAAGTAAATGTAGCCTTTGT+TGG | - | chr1_2:19343371-19343390 | Msa0061290:intron | 30.0% | |
| ATTCGGGAAACATTTCATAA+AGG | + | chr1_2:19343427-19343446 | None:intergenic | 30.0% | |
| TATACAAGGAAGGAAACAAT+TGG | - | chr1_2:19343571-19343590 | Msa0061290:intron | 30.0% | |
| TTATTGTGGAATTACAACCA+AGG | + | chr1_2:19343731-19343750 | None:intergenic | 30.0% | |
| !! | TGTCACAAGGATTTTAATGA+AGG | - | chr1_2:19344057-19344076 | Msa0061290:intron | 30.0% |
| CTGAAATGACATTTATAGAC+TGG | + | chr1_2:19344098-19344117 | None:intergenic | 30.0% | |
| AGAGAGAAACTAGAATTACA+TGG | - | chr1_2:19344165-19344184 | Msa0061290:intron | 30.0% | |
| !! | TTTTAGAGAAGATTTTGCCA+TGG | - | chr1_2:19344207-19344226 | Msa0061290:intron | 30.0% |
| TCCAGTATCATTCAAGATTA+GGG | - | chr1_2:19344689-19344708 | Msa0061290:intron | 30.0% | |
| GCTTTAATTGTATTTGCAAG+AGG | - | chr1_2:19344717-19344736 | Msa0061290:intron | 30.0% | |
| !!! | CCTGGTTTTGCTTATAATTA+AGG | + | chr1_2:19344933-19344952 | None:intergenic | 30.0% |
| CCTTAATTATAAGCAAAACC+AGG | - | chr1_2:19344930-19344949 | Msa0061290:intron | 30.0% | |
| ! | CTTTTGCTTACAATAAAGTC+CGG | - | chr1_2:19345051-19345070 | Msa0061290:intron | 30.0% |
| !! | AGGGAGTATACAGTAATTTT+GGG | - | chr1_2:19345074-19345093 | Msa0061290:intron | 30.0% |
| AATATTGTGAAACACTGGAA+TGG | - | chr1_2:19345113-19345132 | Msa0061290:intron | 30.0% | |
| CTAGATGATATGGAAATTGA+GGG | + | chr1_2:19345168-19345187 | None:intergenic | 30.0% | |
| ACTAGATGATATGGAAATTG+AGG | + | chr1_2:19345169-19345188 | None:intergenic | 30.0% | |
| ! | TATGATGGAACTAGATGATA+TGG | + | chr1_2:19345178-19345197 | None:intergenic | 30.0% |
| TGCAATGTTCTATGTAAAAG+TGG | - | chr1_2:19345554-19345573 | Msa0061290:intron | 30.0% | |
| GCAATGTTCTATGTAAAAGT+GGG | - | chr1_2:19345555-19345574 | Msa0061290:intron | 30.0% | |
| CTTCTTACTCAGTTATAAGA+AGG | + | chr1_2:19345668-19345687 | None:intergenic | 30.0% | |
| TATCTTCAACGTTGTATTGA+AGG | - | chr1_2:19345723-19345742 | Msa0061290:intron | 30.0% | |
| CCAAAAATCTAACTAGTTAG+GGG | + | chr1_2:19345872-19345891 | None:intergenic | 30.0% | |
| !! | TTTTGATAGCATAGCATGTA+AGG | + | chr1_2:19345904-19345923 | None:intergenic | 30.0% |
| !! | AAATATGGTTTGGTGATTTG+AGG | + | chr1_2:19346093-19346112 | None:intergenic | 30.0% |
| CTTCAAATATAACTAAGGAC+AGG | + | chr1_2:19346666-19346685 | None:intergenic | 30.0% | |
| !! | TGAACTCTCTAAAATACCAA+AGG | + | chr1_2:19346693-19346712 | None:intergenic | 30.0% |
| !!! | TGTTTTGACTGAAGTAAAGA+AGG | - | chr1_2:19346713-19346732 | Msa0061290:intron | 30.0% |
| AGGTTCATAATGATATCATG+AGG | + | chr1_2:19346871-19346890 | None:intergenic | 30.0% | |
| TGATATCATTATGAACCTGT+AGG | - | chr1_2:19346873-19346892 | Msa0061290:intron | 30.0% | |
| GATATCATTATGAACCTGTA+GGG | - | chr1_2:19346874-19346893 | Msa0061290:intron | 30.0% | |
| ATATCATTATGAACCTGTAG+GGG | - | chr1_2:19346875-19346894 | Msa0061290:intron | 30.0% | |
| TAGTAGTTTGGGAAAGAATT+GGG | + | chr1_2:19347022-19347041 | None:intergenic | 30.0% | |
| TAAATAATAGAAGAGAGGAG+AGG | + | chr1_2:19347056-19347075 | None:intergenic | 30.0% | |
| TTGAAAGATTTGTGTGGAAA+TGG | - | chr1_2:19347277-19347296 | Msa0061290:CDS | 30.0% | |
| ! | CTGTTTTCATAGATTTGTAG+AGG | + | chr1_2:19347333-19347352 | None:intergenic | 30.0% |
| CTCTACAAATCTATGAAAAC+AGG | - | chr1_2:19347331-19347350 | Msa0061290:intron | 30.0% | |
| ! | GAAATGAGGAAAAGGAATTT+TGG | - | chr1_2:19347499-19347518 | Msa0061290:intron | 30.0% |
| TTCCAGACTATCCATTATAT+GGG | + | chr1_2:19347538-19347557 | None:intergenic | 30.0% | |
| !!! | TCCCCTTGTTTTATTGTTTT+AGG | - | chr1_2:19347600-19347619 | Msa0061290:intron | 30.0% |
| CCTCCTAAAACAATAAAACA+AGG | + | chr1_2:19347606-19347625 | None:intergenic | 30.0% | |
| !!! | CCTTGTTTTATTGTTTTAGG+AGG | - | chr1_2:19347603-19347622 | Msa0061290:intron | 30.0% |
| ! | AGGAGGAGTACAATAAAAAA+TGG | + | chr1_2:19347670-19347689 | None:intergenic | 30.0% |
| ! | CTGGATCCTTGAAAATATTT+TGG | + | chr1_2:19347758-19347777 | None:intergenic | 30.0% |
| GCGCTATAAATCTTAAATAC+TGG | + | chr1_2:19347777-19347796 | None:intergenic | 30.0% | |
| TAATTGTAGATCACTGTACT+GGG | + | chr1_2:19348071-19348090 | None:intergenic | 30.0% | |
| TAGGTTCATAAATGTGTTTC+TGG | - | chr1_2:19348128-19348147 | Msa0061290:intron | 30.0% | |
| ! | AATGTTTTATGCTGGATTTC+TGG | - | chr1_2:19348408-19348427 | Msa0061290:intron | 30.0% |
| ACATTATAAATGATGAACCG+TGG | + | chr1_2:19348447-19348466 | None:intergenic | 30.0% | |
| ! | GAAGAAAAATGTCTTTTGAG+CGG | + | chr1_2:19348682-19348701 | None:intergenic | 30.0% |
| TTGAATTTCGATAGCTAAAC+GGG | + | chr1_2:19348772-19348791 | None:intergenic | 30.0% | |
| AGCTATCGAAATTCAAAACA+TGG | - | chr1_2:19348776-19348795 | Msa0061290:intron | 30.0% | |
| ! | TATTTTGTTGGATGACTACT+GGG | - | chr1_2:19348859-19348878 | Msa0061290:intron | 30.0% |
| ATAAGTGTATCTGTAAACCA+GGG | + | chr1_2:19348942-19348961 | None:intergenic | 30.0% | |
| AATAAGTGTATCTGTAAACC+AGG | + | chr1_2:19348943-19348962 | None:intergenic | 30.0% | |
| CTATTGTGATACTAACAACA+CGG | - | chr1_2:19349162-19349181 | Msa0061290:intron | 30.0% | |
| !!! | AAAGTTATTTTTTGGTGCCT+TGG | - | chr1_2:19349258-19349277 | Msa0061290:intron | 30.0% |
| TGAGCTGTATATCTTCATAT+TGG | - | chr1_2:19349295-19349314 | Msa0061290:intron | 30.0% | |
| ! | TTAGCTTGAATAGTTAATCC+TGG | + | chr1_2:19349394-19349413 | None:intergenic | 30.0% |
| AGTATGTGTCTTTAATCTTC+TGG | + | chr1_2:19349450-19349469 | None:intergenic | 30.0% | |
| ! | GGCTTTGTATAACAGAATAA+TGG | + | chr1_2:19349696-19349715 | None:intergenic | 30.0% |
| ! | AAATTGATAGTAAGTGATGC+AGG | - | chr1_2:19349892-19349911 | Msa0061290:CDS | 30.0% |
| GCGAAGGATTTATATGTTAT+GGG | - | chr1_2:19349914-19349933 | Msa0061290:intron | 30.0% | |
| CGAAGGATTTATATGTTATG+GGG | - | chr1_2:19349915-19349934 | Msa0061290:intron | 30.0% | |
| TACAAATGATTGAGTAGATC+TGG | - | chr1_2:19350119-19350138 | Msa0061290:intron | 30.0% | |
| ! | TATGTGATATAATGATGGTG+TGG | - | chr1_2:19350261-19350280 | Msa0061290:intron | 30.0% |
| TAAACATGTATTCATGTTCC+AGG | - | chr1_2:19350302-19350321 | Msa0061290:intron | 30.0% | |
| TAAATGTGATACACCAATTG+TGG | + | chr1_2:19350797-19350816 | None:intergenic | 30.0% | |
| !!! | ATTTTGATTGCTTGATGACT+TGG | - | chr1_2:19350869-19350888 | Msa0061290:intron | 30.0% |
| ! | TCCTTATTAGTCTGGAAATT+TGG | - | chr1_2:19350992-19351011 | Msa0061290:intron | 30.0% |
| ! | CCTTATTAGTCTGGAAATTT+GGG | - | chr1_2:19350993-19351012 | Msa0061290:intron | 30.0% |
| ! | CTTATTAGTCTGGAAATTTG+GGG | - | chr1_2:19350994-19351013 | Msa0061290:intron | 30.0% |
| GTCATTGTTGTGGATATTAT+TGG | - | chr1_2:19351035-19351054 | Msa0061290:CDS | 30.0% | |
| TTCATTGAAGTTAGTGTAAC+GGG | + | chr1_2:19351064-19351083 | None:intergenic | 30.0% | |
| CTTCATTGAAGTTAGTGTAA+CGG | + | chr1_2:19351065-19351084 | None:intergenic | 30.0% | |
| CACTAACTTCAATGAAGATT+TGG | - | chr1_2:19351068-19351087 | Msa0061290:CDS | 30.0% | |
| AAGAGACAAGAAAAGAAATG+GGG | + | chr1_2:19351154-19351173 | None:intergenic | 30.0% | |
| GAAGAGACAAGAAAAGAAAT+GGG | + | chr1_2:19351155-19351174 | None:intergenic | 30.0% | |
| TGAAGAGACAAGAAAAGAAA+TGG | + | chr1_2:19351156-19351175 | None:intergenic | 30.0% | |
| CAATAAGATTGACACAAATG+AGG | + | chr1_2:19351218-19351237 | None:intergenic | 30.0% | |
| CTCATTTGTGTCAATCTTAT+TGG | - | chr1_2:19351216-19351235 | Msa0061290:intron | 30.0% | |
| AATACTAGGGAAAAGACAAA+AGG | + | chr1_2:19351293-19351312 | None:intergenic | 30.0% | |
| TTATAAATTCAGTTCCGTGT+TGG | - | chr1_2:19351375-19351394 | Msa0061290:intron | 30.0% | |
| !!! | TTGGTTTTGTAGGTATTGTA+TGG | - | chr1_2:19351394-19351413 | Msa0061290:intron | 30.0% |
| TTCCTTGTAAATAAAAGGGT+GGG | + | chr1_2:19351519-19351538 | None:intergenic | 30.0% | |
| TTTCCTTGTAAATAAAAGGG+TGG | + | chr1_2:19351520-19351539 | None:intergenic | 30.0% | |
| AACCTCTATTGCTTAAACAT+TGG | - | chr1_2:19351791-19351810 | Msa0061290:intron | 30.0% | |
| CATCACTTTAAGTATCCTTA+TGG | + | chr1_2:19352182-19352201 | None:intergenic | 30.0% | |
| ATGTATAGTACAAACTGACA+TGG | - | chr1_2:19352351-19352370 | Msa0061290:intron | 30.0% | |
| AAAAAGGAAAAACAGTAGAC+TGG | - | chr1_2:19352415-19352434 | Msa0061290:intron | 30.0% | |
| TTATTGACAGATTCATCAGT+TGG | - | chr1_2:19352488-19352507 | Msa0061290:intron | 30.0% | |
| !! | TCTTTTAGAGAAACCATCTT+AGG | + | chr1_2:19352603-19352622 | None:intergenic | 30.0% |
| !! | CATTTCTGAAACTTGAAGTT+TGG | + | chr1_2:19352750-19352769 | None:intergenic | 30.0% |
| ! | AGATGAAATTTTGCTCATGT+TGG | - | chr1_2:19352908-19352927 | Msa0061290:CDS | 30.0% |
| GTTTACATATTGGTAAATGG+TGG | - | chr1_2:19352953-19352972 | Msa0061290:intron | 30.0% | |
| TTCTTACATTCAAAGCTTTG+TGG | - | chr1_2:19353019-19353038 | Msa0061290:intron | 30.0% | |
| ! | TTCATATTCACAGTTTGCTT+TGG | + | chr1_2:19353157-19353176 | None:intergenic | 30.0% |
| AAGCAAACTGTGAATATGAA+AGG | - | chr1_2:19353157-19353176 | Msa0061290:CDS | 30.0% | |
| !!! | CTTGTTTTTGCTGTGATGTT+TGG | + | chr1_2:19341950-19341969 | None:intergenic | 35.0% |
| !! | ACTCTCTTCAGAAAGTATTC+AGG | + | chr1_2:19342022-19342041 | None:intergenic | 35.0% |
| TGCAACCATTACATCATCAA+TGG | - | chr1_2:19342108-19342127 | Msa0061290:three_prime_UTR | 35.0% | |
| !! | GATTGCCATTGATGATGTAA+TGG | + | chr1_2:19342116-19342135 | None:intergenic | 35.0% |
| AGAATGAAATGAACGAAGGA+AGG | + | chr1_2:19342170-19342189 | None:intergenic | 35.0% | |
| GCATAGAATGAAATGAACGA+AGG | + | chr1_2:19342174-19342193 | None:intergenic | 35.0% | |
| AAGACAATCATGTTCGATTG+CGG | - | chr1_2:19342290-19342309 | Msa0061290:three_prime_UTR | 35.0% | |
| CTTACTTCACTGAAGTTTGT+GGG | - | chr1_2:19342532-19342551 | Msa0061290:CDS | 35.0% | |
| TACTCAAATTAGGCCATGTT+TGG | - | chr1_2:19342894-19342913 | Msa0061290:CDS | 35.0% | |
| TAAGCTATCATGTAGAGCTT+AGG | - | chr1_2:19343005-19343024 | Msa0061290:intron | 35.0% | |
| ATGTCAAAAACGTCCAACAA+AGG | + | chr1_2:19343387-19343406 | None:intergenic | 35.0% | |
| !! | AGGAAAGTATCTCGTAGAAA+AGG | - | chr1_2:19343523-19343542 | Msa0061290:intron | 35.0% |
| !! | GGAAAGTATCTCGTAGAAAA+GGG | - | chr1_2:19343524-19343543 | Msa0061290:intron | 35.0% |
| AACAATTGGCAGAAAAATGC+TGG | - | chr1_2:19343585-19343604 | Msa0061290:intron | 35.0% | |
| AAAATGCTGGTGGTTAATAG+TGG | - | chr1_2:19343598-19343617 | Msa0061290:intron | 35.0% | |
| ! | AAGGAGACAAAGCTTTTGTT+GGG | + | chr1_2:19343791-19343810 | None:intergenic | 35.0% |
| ! | AAAGGAGACAAAGCTTTTGT+TGG | + | chr1_2:19343792-19343811 | None:intergenic | 35.0% |
| CTTTGATGTTGGAAGACTTT+CGG | - | chr1_2:19343808-19343827 | Msa0061290:intron | 35.0% | |
| ATTACTGAGTGCATGAAGAA+AGG | - | chr1_2:19343882-19343901 | Msa0061290:intron | 35.0% | |
| TGCATGAAGAAAGGTAACAT+AGG | - | chr1_2:19343891-19343910 | Msa0061290:intron | 35.0% | |
| TTAGATAAGACATGTCACTG+AGG | - | chr1_2:19343954-19343973 | Msa0061290:intron | 35.0% | |
| ACCAAACTACTAATTGACCA+TGG | + | chr1_2:19344227-19344246 | None:intergenic | 35.0% | |
| AATTGAGATGCTAATGTCAG+AGG | + | chr1_2:19344300-19344319 | None:intergenic | 35.0% | |
| CATATTATGCAGGACATGTA+AGG | - | chr1_2:19344426-19344445 | Msa0061290:intron | 35.0% | |
| !! | AAAGAGTCTTGTTGAAAGTC+TGG | - | chr1_2:19344631-19344650 | Msa0061290:intron | 35.0% |
| GTCCAGTATCATTCAAGATT+AGG | - | chr1_2:19344688-19344707 | Msa0061290:intron | 35.0% | |
| ACCCTAATCTTGAATGATAC+TGG | + | chr1_2:19344693-19344712 | None:intergenic | 35.0% | |
| AAAGGAATAAGTTCACCTGA+TGG | + | chr1_2:19344748-19344767 | None:intergenic | 35.0% | |
| ! | CTTATTCCTTTTCAGTCACA+TGG | - | chr1_2:19344757-19344776 | Msa0061290:intron | 35.0% |
| GTCTTGTAACACTGCTTAAA+GGG | + | chr1_2:19344811-19344830 | None:intergenic | 35.0% | |
| ! | AGTCTTGTAACACTGCTTAA+AGG | + | chr1_2:19344812-19344831 | None:intergenic | 35.0% |
| TGCTTATAATTAAGGCCAGA+GGG | + | chr1_2:19344925-19344944 | None:intergenic | 35.0% | |
| TTGCTTATAATTAAGGCCAG+AGG | + | chr1_2:19344926-19344945 | None:intergenic | 35.0% | |
| !!! | TACATCGATTTTCTTTGACC+TGG | + | chr1_2:19344951-19344970 | None:intergenic | 35.0% |
| AAATTACTGTATACTCCCTC+CGG | + | chr1_2:19345073-19345092 | None:intergenic | 35.0% | |
| !! | GAGGGAGTATACAGTAATTT+TGG | - | chr1_2:19345073-19345092 | Msa0061290:intron | 35.0% |
| CCAGTGTTTCACAATATTGA+AGG | + | chr1_2:19345111-19345130 | None:intergenic | 35.0% | |
| CCTTCAATATTGTGAAACAC+TGG | - | chr1_2:19345108-19345127 | Msa0061290:intron | 35.0% | |
| ATCAGGAATCAGACATATGA+TGG | + | chr1_2:19345193-19345212 | None:intergenic | 35.0% | |
| GGAGTAATAATGCTAAGGTT+GGG | + | chr1_2:19345324-19345343 | None:intergenic | 35.0% | |
| AGGAGTAATAATGCTAAGGT+TGG | + | chr1_2:19345325-19345344 | None:intergenic | 35.0% | |
| ATGGAGGAGTAATAATGCTA+AGG | + | chr1_2:19345329-19345348 | None:intergenic | 35.0% | |
| ! | CCCCTAACTAGTTAGATTTT+TGG | - | chr1_2:19345869-19345888 | Msa0061290:intron | 35.0% |
| GTAGGAGTGAAAATATGGTT+TGG | + | chr1_2:19346103-19346122 | None:intergenic | 35.0% | |
| GTCATGTAGGAGTGAAAATA+TGG | + | chr1_2:19346108-19346127 | None:intergenic | 35.0% | |
| AAAATGCATATGAATGCTGC+TGG | + | chr1_2:19346324-19346343 | None:intergenic | 35.0% | |
| ! | GCAGCATTCATATGCATTTT+AGG | - | chr1_2:19346324-19346343 | Msa0061290:intron | 35.0% |
| !! | CACTGCTTGTTGTTATAAGA+AGG | - | chr1_2:19346409-19346428 | Msa0061290:intron | 35.0% |
| TGAAAATACATACGGCTTTG+AGG | + | chr1_2:19346536-19346555 | None:intergenic | 35.0% | |
| TATAACTAAGGACAGGTCAA+TGG | + | chr1_2:19346659-19346678 | None:intergenic | 35.0% | |
| TGACTGAAGTAAAGAAGGAA+TGG | - | chr1_2:19346718-19346737 | Msa0061290:intron | 35.0% | |
| !!! | TCCTATTTGGTGCATTTTGT+TGG | - | chr1_2:19346765-19346784 | Msa0061290:intron | 35.0% |
| TCCAACAAAATGCACCAAAT+AGG | + | chr1_2:19346769-19346788 | None:intergenic | 35.0% | |
| ! | TGACATCTCTTTTCTGCTAT+TGG | - | chr1_2:19346967-19346986 | Msa0061290:intron | 35.0% |
| ! | GACATCTCTTTTCTGCTATT+GGG | - | chr1_2:19346968-19346987 | Msa0061290:intron | 35.0% |
| AGTAGTTTGGGAAAGAATTG+GGG | + | chr1_2:19347021-19347040 | None:intergenic | 35.0% | |
| CTAGTAGTTTGGGAAAGAAT+TGG | + | chr1_2:19347023-19347042 | None:intergenic | 35.0% | |
| TAAACTTGGGTAGTTACAGA+GGG | + | chr1_2:19347098-19347117 | None:intergenic | 35.0% | |
| ATAAACTTGGGTAGTTACAG+AGG | + | chr1_2:19347099-19347118 | None:intergenic | 35.0% | |
| TTTCTCGGACCAAATAAACT+TGG | + | chr1_2:19347178-19347197 | None:intergenic | 35.0% | |
| CAACAGTGAAACTGAAAACA+AGG | + | chr1_2:19347251-19347270 | None:intergenic | 35.0% | |
| AGAGTTGAGAAATGAGGAAA+AGG | - | chr1_2:19347491-19347510 | Msa0061290:intron | 35.0% | |
| CTAGTTACAAGCCCATATAA+TGG | - | chr1_2:19347524-19347543 | Msa0061290:intron | 35.0% | |
| CTTCCAGACTATCCATTATA+TGG | + | chr1_2:19347539-19347558 | None:intergenic | 35.0% | |
| ! | TAATGGATAGTCTGGAAGTT+TGG | - | chr1_2:19347541-19347560 | Msa0061290:intron | 35.0% |
| GAAAAGCCACAAACAAATCT+TGG | + | chr1_2:19347704-19347723 | None:intergenic | 35.0% | |
| !!! | GAGGAGTCCTTGTTTTAATT+TGG | - | chr1_2:19347896-19347915 | Msa0061290:intron | 35.0% |
| GTAATTGTAGATCACTGTAC+TGG | + | chr1_2:19348072-19348091 | None:intergenic | 35.0% | |
| !! | GTTCATAAATGTGTTTCTGG+AGG | - | chr1_2:19348131-19348150 | Msa0061290:intron | 35.0% |
| CTTATTCCAACATTTGCTCT+TGG | - | chr1_2:19348164-19348183 | Msa0061290:intron | 35.0% | |
| !! | AAGAGCGTTAGGAATAAGAA+GGG | + | chr1_2:19348278-19348297 | None:intergenic | 35.0% |
| !! | AAAGAGCGTTAGGAATAAGA+AGG | + | chr1_2:19348279-19348298 | None:intergenic | 35.0% |
| TATTCCTAACGCTCTTTCAA+AGG | - | chr1_2:19348282-19348301 | Msa0061290:intron | 35.0% | |
| ATTCCTAACGCTCTTTCAAA+GGG | - | chr1_2:19348283-19348302 | Msa0061290:intron | 35.0% | |
| ! | CATTTGTGCGTATCTTTTCT+AGG | - | chr1_2:19348366-19348385 | Msa0061290:intron | 35.0% |
| ! | CTGTCCTTAATGTTTTATGC+TGG | - | chr1_2:19348400-19348419 | Msa0061290:intron | 35.0% |
| TCTTCAATCCATTATGACCA+AGG | - | chr1_2:19348697-19348716 | Msa0061290:intron | 35.0% | |
| TAATCCAACCTTGGTCATAA+TGG | + | chr1_2:19348708-19348727 | None:intergenic | 35.0% | |
| ATGGTTCATTAATCCAACCT+TGG | + | chr1_2:19348717-19348736 | None:intergenic | 35.0% | |
| AACCATGAAGTGAACTACTT+AGG | - | chr1_2:19348731-19348750 | Msa0061290:intron | 35.0% | |
| ATCCTAAGTAGTTCACTTCA+TGG | + | chr1_2:19348736-19348755 | None:intergenic | 35.0% | |
| AAGTGAACTACTTAGGATTC+TGG | - | chr1_2:19348738-19348757 | Msa0061290:intron | 35.0% | |
| ! | GTATTTTGTTGGATGACTAC+TGG | - | chr1_2:19348858-19348877 | Msa0061290:intron | 35.0% |
| AAACCTGATGAGAAGTAGAT+AGG | + | chr1_2:19348905-19348924 | None:intergenic | 35.0% | |
| TACACCGAAACTTTGCTTTA+GGG | - | chr1_2:19349010-19349029 | Msa0061290:intron | 35.0% | |
| GAATTGTGTTCTGATGCTAA+AGG | - | chr1_2:19349054-19349073 | Msa0061290:intron | 35.0% | |
| TCAGAAGTCACATAAAACCA+AGG | + | chr1_2:19349278-19349297 | None:intergenic | 35.0% | |
| GTGTACTTCTCGTTATTTGT+TGG | - | chr1_2:19349317-19349336 | Msa0061290:intron | 35.0% | |
| ACGTATCACAAGATGCTTAT+AGG | - | chr1_2:19349415-19349434 | Msa0061290:intron | 35.0% | |
| ATCACAAGATGCTTATAGGT+TGG | - | chr1_2:19349419-19349438 | Msa0061290:intron | 35.0% | |
| AATTGCATGTGAAGATGACT+GGG | + | chr1_2:19349639-19349658 | None:intergenic | 35.0% | |
| AAATTTCCTGACAGCACAAA+AGG | - | chr1_2:19349832-19349851 | Msa0061290:CDS | 35.0% | |
| AATTTCCTGACAGCACAAAA+GGG | - | chr1_2:19349833-19349852 | Msa0061290:CDS | 35.0% | |
| GGCGAAGGATTTATATGTTA+TGG | - | chr1_2:19349913-19349932 | Msa0061290:intron | 35.0% | |
| GATGATTGCATCACTTCATT+AGG | - | chr1_2:19350019-19350038 | Msa0061290:intron | 35.0% | |
| ! | TTACAAGAGAGGAAGTATGT+CGG | - | chr1_2:19350060-19350079 | Msa0061290:intron | 35.0% |
| TATAGATGACATGCCTAATG+AGG | + | chr1_2:19350089-19350108 | None:intergenic | 35.0% | |
| ACAAATTATACCTCCGTTCT+CGG | + | chr1_2:19350468-19350487 | None:intergenic | 35.0% | |
| !! | ACTTGAAGTTTTCAAGCACT+GGG | - | chr1_2:19350635-19350654 | Msa0061290:intron | 35.0% |
| !!! | GCGACAAGATTTTTTTCTGA+AGG | + | chr1_2:19350663-19350682 | None:intergenic | 35.0% |
| !! | GTTCTAGAAGCATCACAAAA+TGG | + | chr1_2:19350964-19350983 | None:intergenic | 35.0% |
| !!! | TTTTGTGATGCTTCTAGAAC+AGG | - | chr1_2:19350964-19350983 | Msa0061290:intron | 35.0% |
| !! | TTTGTGATGCTTCTAGAACA+GGG | - | chr1_2:19350965-19350984 | Msa0061290:intron | 35.0% |
| CCCAAATTTCCAGACTAATA+AGG | + | chr1_2:19350996-19351015 | None:intergenic | 35.0% | |
| ! | GCTTAAATGTGTCATTGTTG+TGG | - | chr1_2:19351025-19351044 | Msa0061290:intron | 35.0% |
| ACAAGAAAAGAAATGGGGAA+GGG | + | chr1_2:19351149-19351168 | None:intergenic | 35.0% | |
| AGGGAAAAGACAAAAGGAAT+GGG | + | chr1_2:19351287-19351306 | None:intergenic | 35.0% | |
| TAGGGAAAAGACAAAAGGAA+TGG | + | chr1_2:19351288-19351307 | None:intergenic | 35.0% | |
| CAATACCTACAAAACCAACA+CGG | + | chr1_2:19351392-19351411 | None:intergenic | 35.0% | |
| !! | TTTTGTAGGTATTGTATGGC+TGG | - | chr1_2:19351398-19351417 | Msa0061290:intron | 35.0% |
| TTCTGTGCAAACAATTCATC+AGG | - | chr1_2:19351546-19351565 | Msa0061290:intron | 35.0% | |
| CTAGTCTAAGTTCATGAGTT+TGG | - | chr1_2:19351677-19351696 | Msa0061290:intron | 35.0% | |
| CTCCAATGTTTAAGCAATAG+AGG | + | chr1_2:19351796-19351815 | None:intergenic | 35.0% | |
| TTGCTTAAACATTGGAGTAC+AGG | - | chr1_2:19351799-19351818 | Msa0061290:intron | 35.0% | |
| TGCTTAAACATTGGAGTACA+GGG | - | chr1_2:19351800-19351819 | Msa0061290:intron | 35.0% | |
| AAATGGAGAACTTCAGTAAG+CGG | + | chr1_2:19351877-19351896 | None:intergenic | 35.0% | |
| ! | ATAGAAAACTTGAGCGCTTT+TGG | - | chr1_2:19351910-19351929 | Msa0061290:intron | 35.0% |
| CAATATCTAAATGGCTGAAG+TGG | + | chr1_2:19352081-19352100 | None:intergenic | 35.0% | |
| TGGTGGCAACAATATCTAAA+TGG | + | chr1_2:19352090-19352109 | None:intergenic | 35.0% | |
| !! | CAATCTTTAACGGACTAATC+TGG | + | chr1_2:19352110-19352129 | None:intergenic | 35.0% |
| ! | CAATCTTTGAGGGACTAATT+TGG | - | chr1_2:19352234-19352253 | Msa0061290:intron | 35.0% |
| !! | ATCTTTTGGAGATCTAGTCA+GGG | - | chr1_2:19352295-19352314 | Msa0061290:intron | 35.0% |
| ATAGTACAAACTGACATGGA+AGG | - | chr1_2:19352355-19352374 | Msa0061290:intron | 35.0% | |
| AATTTCGTTGTTTGCAGGAT+GGG | + | chr1_2:19352658-19352677 | None:intergenic | 35.0% | |
| CTTACAATTTCGTTGTTTGC+AGG | + | chr1_2:19352663-19352682 | None:intergenic | 35.0% | |
| !! | GCAGTTTTTGATGAAAGTGT+CGG | + | chr1_2:19352721-19352740 | None:intergenic | 35.0% |
| TCATCTTCAACTTGAAGTTC+AGG | + | chr1_2:19352822-19352841 | None:intergenic | 35.0% | |
| ! | ACGGGGTTTAGTTTACATAT+TGG | - | chr1_2:19352943-19352962 | Msa0061290:CDS | 35.0% |
| ! | GAGGGAAACAGTTAACATTT+TGG | - | chr1_2:19353053-19353072 | Msa0061290:intron | 35.0% |
| ! | AGTTTGCTTTGGTTGTACTT+TGG | + | chr1_2:19353146-19353165 | None:intergenic | 35.0% |
| TGTGAATATGAAAGGTTGCA+AGG | - | chr1_2:19353165-19353184 | Msa0061290:CDS | 35.0% | |
| TAACAGATTCTCATTCCATC+TGG | + | chr1_2:19353244-19353263 | None:intergenic | 35.0% | |
| !! | TTTTGTAGTGTTTTGCTGTC+TGG | - | chr1_2:19353350-19353369 | Msa0061290:five_prime_UTR | 35.0% |
| ACGTTTAGAGAAGAAAACGC+AGG | - | chr1_2:19341974-19341993 | Msa0061290:three_prime_UTR | 40.0% | |
| TAGAGAAGAAAACGCAGGTT+TGG | - | chr1_2:19341979-19341998 | Msa0061290:three_prime_UTR | 40.0% | |
| !!! | GCAATCCAAGCTCTAGTTTT+AGG | - | chr1_2:19342130-19342149 | Msa0061290:three_prime_UTR | 40.0% |
| TGAAATGAACGAAGGAAGGA+AGG | + | chr1_2:19342166-19342185 | None:intergenic | 40.0% | |
| CCACAAACTTCAGTGAAGTA+AGG | + | chr1_2:19342534-19342553 | None:intergenic | 40.0% | |
| CCTTACTTCACTGAAGTTTG+TGG | - | chr1_2:19342531-19342550 | Msa0061290:CDS | 40.0% | |
| CAGTGGACCAGTTTATATGA+CGG | - | chr1_2:19342557-19342576 | Msa0061290:CDS | 40.0% | |
| CGGAACTCACACTTAAAACA+TGG | + | chr1_2:19342714-19342733 | None:intergenic | 40.0% | |
| ! | TCAACACTCGCTCTTTTATC+AGG | + | chr1_2:19342748-19342767 | None:intergenic | 40.0% |
| TCTCGTTTGACACTGTATGA+TGG | - | chr1_2:19342793-19342812 | Msa0061290:CDS | 40.0% | |
| CTCGTTTGACACTGTATGAT+GGG | - | chr1_2:19342794-19342813 | Msa0061290:CDS | 40.0% | |
| GAGCTTAGGAGAACAGTTTA+TGG | - | chr1_2:19343019-19343038 | Msa0061290:intron | 40.0% | |
| TGAAATGTTTCCCGAATGTG+CGG | - | chr1_2:19343430-19343449 | Msa0061290:intron | 40.0% | |
| AATTGGCAGAAAAATGCTGG+TGG | - | chr1_2:19343588-19343607 | Msa0061290:intron | 40.0% | |
| !! | AAAGCACCATAAGCATTGAC+TGG | + | chr1_2:19343689-19343708 | None:intergenic | 40.0% |
| TTGTGGAATTACAACCAAGG+AGG | + | chr1_2:19343728-19343747 | None:intergenic | 40.0% | |
| ! | AGCTTTGTCTCCTTTGATGT+TGG | - | chr1_2:19343797-19343816 | Msa0061290:intron | 40.0% |
| CGAAAGTCTTCCAACATCAA+AGG | + | chr1_2:19343810-19343829 | None:intergenic | 40.0% | |
| GACATGTCACTGAGGAATAA+CGG | - | chr1_2:19343962-19343981 | Msa0061290:intron | 40.0% | |
| GCCATGGTCAATTAGTAGTT+TGG | - | chr1_2:19344223-19344242 | Msa0061290:intron | 40.0% | |
| !! | TGGTGTGTGTTTTAGACTGT+TGG | - | chr1_2:19344243-19344262 | Msa0061290:intron | 40.0% |
| CTACGGCAATAACTGTTTAC+AGG | + | chr1_2:19344361-19344380 | None:intergenic | 40.0% | |
| CACAGTCTGCTTCAAATCTA+CGG | + | chr1_2:19344378-19344397 | None:intergenic | 40.0% | |
| CATAATATGCACGTATCTGC+AGG | + | chr1_2:19344415-19344434 | None:intergenic | 40.0% | |
| CAGATACGTGCATATTATGC+AGG | - | chr1_2:19344416-19344435 | Msa0061290:intron | 40.0% | |
| !! | AGTCTTGTTGAAAGTCTGGA+AGG | - | chr1_2:19344635-19344654 | Msa0061290:intron | 40.0% |
| ! | GTCTTGTTGAAAGTCTGGAA+GGG | - | chr1_2:19344636-19344655 | Msa0061290:intron | 40.0% |
| TCTTGTTGAAAGTCTGGAAG+GGG | - | chr1_2:19344637-19344656 | Msa0061290:intron | 40.0% | |
| TTGTCACCATGTGACTGAAA+AGG | + | chr1_2:19344766-19344785 | None:intergenic | 40.0% | |
| ACACTGCTTAAAGGGAACAT+TGG | + | chr1_2:19344803-19344822 | None:intergenic | 40.0% | |
| TTGCTTACAATAAAGTCCGG+AGG | - | chr1_2:19345054-19345073 | Msa0061290:intron | 40.0% | |
| TGCTTACAATAAAGTCCGGA+GGG | - | chr1_2:19345055-19345074 | Msa0061290:intron | 40.0% | |
| ATCAGTTCAGTCTGTGATGT+GGG | + | chr1_2:19345272-19345291 | None:intergenic | 40.0% | |
| TATCAGTTCAGTCTGTGATG+TGG | + | chr1_2:19345273-19345292 | None:intergenic | 40.0% | |
| GACGCAGAAATGGTTTATAC+AGG | - | chr1_2:19345579-19345598 | Msa0061290:intron | 40.0% | |
| GATTTGAGGAAGGGACATAA+AGG | + | chr1_2:19346079-19346098 | None:intergenic | 40.0% | |
| !! | TGGTTTGGTGATTTGAGGAA+GGG | + | chr1_2:19346088-19346107 | None:intergenic | 40.0% |
| !! | ATGGTTTGGTGATTTGAGGA+AGG | + | chr1_2:19346089-19346108 | None:intergenic | 40.0% |
| ACGTATCGTAGTTGCATAAG+TGG | + | chr1_2:19346484-19346503 | None:intergenic | 40.0% | |
| !!! | TGTGCCATTTTGCTCCTATT+TGG | - | chr1_2:19346752-19346771 | Msa0061290:intron | 40.0% |
| TGCACCAAATAGGAGCAAAA+TGG | + | chr1_2:19346759-19346778 | None:intergenic | 40.0% | |
| AGGGTGGTAACTAGTAGTTT+GGG | + | chr1_2:19347033-19347052 | None:intergenic | 40.0% | |
| TAATAGAAGAGAGGAGAGGA+GGG | + | chr1_2:19347052-19347071 | None:intergenic | 40.0% | |
| ATAATAGAAGAGAGGAGAGG+AGG | + | chr1_2:19347053-19347072 | None:intergenic | 40.0% | |
| GCTAGAGTCAATGGCATATT+TGG | + | chr1_2:19347430-19347449 | None:intergenic | 40.0% | |
| ACCTAAAACGCTAGAGTCAA+TGG | + | chr1_2:19347439-19347458 | None:intergenic | 40.0% | |
| GTAGAGAGAGTTGAGAAATG+AGG | - | chr1_2:19347485-19347504 | Msa0061290:intron | 40.0% | |
| !! | AGCCCATATAATGGATAGTC+TGG | - | chr1_2:19347533-19347552 | Msa0061290:intron | 40.0% |
| ! | CTAGTGCCAAGATTTGTTTG+TGG | - | chr1_2:19347695-19347714 | Msa0061290:intron | 40.0% |
| !! | CATAAATGTGTTTCTGGAGG+AGG | - | chr1_2:19348134-19348153 | Msa0061290:intron | 40.0% |
| TCTTTCAAAGGGACAACATG+AGG | - | chr1_2:19348294-19348313 | Msa0061290:intron | 40.0% | |
| CTTTCAAAGGGACAACATGA+GGG | - | chr1_2:19348295-19348314 | Msa0061290:intron | 40.0% | |
| TTTCAAAGGGACAACATGAG+GGG | - | chr1_2:19348296-19348315 | Msa0061290:intron | 40.0% | |
| CTGGCAAGTTATTGTTTCCA+CGG | - | chr1_2:19348427-19348446 | Msa0061290:intron | 40.0% | |
| CAATCCATTATGACCAAGGT+TGG | - | chr1_2:19348701-19348720 | Msa0061290:intron | 40.0% | |
| ACATGGATCAAGATGTGACA+AGG | - | chr1_2:19348793-19348812 | Msa0061290:intron | 40.0% | |
| ! | GTAGGAACTGCGTATTTTGT+TGG | - | chr1_2:19348847-19348866 | Msa0061290:intron | 40.0% |
| GTTCCTATCTACTTCTCATC+AGG | - | chr1_2:19348899-19348918 | Msa0061290:intron | 40.0% | |
| TTTGAATTAGCTAGCATCCC+TGG | - | chr1_2:19348922-19348941 | Msa0061290:intron | 40.0% | |
| ! | CTAAAGCAAAGTTTCGGTGT+AGG | + | chr1_2:19349011-19349030 | None:intergenic | 40.0% |
| CTACACCGAAACTTTGCTTT+AGG | - | chr1_2:19349009-19349028 | Msa0061290:intron | 40.0% | |
| ACACCGAAACTTTGCTTTAG+GGG | - | chr1_2:19349011-19349030 | Msa0061290:intron | 40.0% | |
| AACCCCCTAAAGCAAAGTTT+CGG | + | chr1_2:19349017-19349036 | None:intergenic | 40.0% | |
| GTGTTCTGATGCTAAAGGAA+TGG | - | chr1_2:19349059-19349078 | Msa0061290:intron | 40.0% | |
| TAACAACACGGAATGTACCT+TGG | - | chr1_2:19349174-19349193 | Msa0061290:intron | 40.0% | |
| ATAGGCGTCACATATAACCA+AGG | + | chr1_2:19349194-19349213 | None:intergenic | 40.0% | |
| CAACTAGTGGGAAAAATGCT+TGG | + | chr1_2:19349588-19349607 | None:intergenic | 40.0% | |
| ! | CAAGCATTTTTCCCACTAGT+TGG | - | chr1_2:19349586-19349605 | Msa0061290:intron | 40.0% |
| ! | TTTTTCCCACTAGTTGGAAC+TGG | - | chr1_2:19349592-19349611 | Msa0061290:intron | 40.0% |
| GAATTGCATGTGAAGATGAC+TGG | + | chr1_2:19349640-19349659 | None:intergenic | 40.0% | |
| CAACAGCCTTTACAGTTAGT+TGG | - | chr1_2:19349758-19349777 | Msa0061290:intron | 40.0% | |
| ATTTCCTGACAGCACAAAAG+GGG | - | chr1_2:19349834-19349853 | Msa0061290:CDS | 40.0% | |
| ! | CATTCAGCTTTGACCTTCTA+GGG | + | chr1_2:19349999-19350018 | None:intergenic | 40.0% |
| ATGTATTCATGTTCCAGGTC+AGG | - | chr1_2:19350307-19350326 | Msa0061290:intron | 40.0% | |
| ! | CTTCAATTTTTCACCTGACC+TGG | + | chr1_2:19350323-19350342 | None:intergenic | 40.0% |
| CATGCTATAATAGCCGAGAA+CGG | - | chr1_2:19350452-19350471 | Msa0061290:intron | 40.0% | |
| CTGCAGTTCACAAATTTGAG+AGG | - | chr1_2:19350544-19350563 | Msa0061290:intron | 40.0% | |
| !! | CACTTGAAGTTTTCAAGCAC+TGG | - | chr1_2:19350634-19350653 | Msa0061290:intron | 40.0% |
| !! | AAAAATCTTGTCGCTTTGCC+TGG | - | chr1_2:19350669-19350688 | Msa0061290:intron | 40.0% |
| !! | AAAATCTTGTCGCTTTGCCT+GGG | - | chr1_2:19350670-19350689 | Msa0061290:intron | 40.0% |
| GAATATAAATGGGCATACCC+AGG | + | chr1_2:19350690-19350709 | None:intergenic | 40.0% | |
| AGATGAATGTCCTCCACAAT+TGG | - | chr1_2:19350781-19350800 | Msa0061290:intron | 40.0% | |
| ATGTGATACACCAATTGTGG+AGG | + | chr1_2:19350794-19350813 | None:intergenic | 40.0% | |
| !! | GATTGCTTGATGACTTGGTA+CGG | - | chr1_2:19350874-19350893 | Msa0061290:intron | 40.0% |
| !!! | ACTTTTCAAGTGCCTAGTGA+AGG | + | chr1_2:19350936-19350955 | None:intergenic | 40.0% |
| !! | TTGTGATGCTTCTAGAACAG+GGG | - | chr1_2:19350966-19350985 | Msa0061290:intron | 40.0% |
| !! | AGTCTGGAAATTTGGGGTTT+TGG | - | chr1_2:19351000-19351019 | Msa0061290:intron | 40.0% |
| !! | GTCTGGAAATTTGGGGTTTT+GGG | - | chr1_2:19351001-19351020 | Msa0061290:intron | 40.0% |
| !! | TCTGGAAATTTGGGGTTTTG+GGG | - | chr1_2:19351002-19351021 | Msa0061290:intron | 40.0% |
| GACAAGAAAAGAAATGGGGA+AGG | + | chr1_2:19351150-19351169 | None:intergenic | 40.0% | |
| AGACAAAAGGAATGGGGAAA+GGG | + | chr1_2:19351280-19351299 | None:intergenic | 40.0% | |
| AAGACAAAAGGAATGGGGAA+AGG | + | chr1_2:19351281-19351300 | None:intergenic | 40.0% | |
| GGGAAAAGACAAAAGGAATG+GGG | + | chr1_2:19351286-19351305 | None:intergenic | 40.0% | |
| TATTGTATGGCTGGAACTGT+AGG | - | chr1_2:19351407-19351426 | Msa0061290:intron | 40.0% | |
| ATTGTATGGCTGGAACTGTA+GGG | - | chr1_2:19351408-19351427 | Msa0061290:intron | 40.0% | |
| GTAGGGCATAAATTAACGTC+AGG | - | chr1_2:19351425-19351444 | Msa0061290:intron | 40.0% | |
| GGATCTGTATCAACTTTGGT+GGG | + | chr1_2:19351455-19351474 | None:intergenic | 40.0% | |
| ATCGGGATCTGTATCAACTT+TGG | + | chr1_2:19351459-19351478 | None:intergenic | 40.0% | |
| ACGCACATCTATCTGAGTAT+CGG | + | chr1_2:19351477-19351496 | None:intergenic | 40.0% | |
| !! | CTCCCACCCTTTTATTTACA+AGG | - | chr1_2:19351514-19351533 | Msa0061290:intron | 40.0% |
| TTACTTGTATATGCTGCTGC+TGG | + | chr1_2:19351582-19351601 | None:intergenic | 40.0% | |
| !! | AGTTCATGAGTTTGGTGCAA+TGG | - | chr1_2:19351685-19351704 | Msa0061290:intron | 40.0% |
| !! | GTTCATGAGTTTGGTGCAAT+GGG | - | chr1_2:19351686-19351705 | Msa0061290:intron | 40.0% |
| TTGGAGTACAGGGTGAAAAT+AGG | - | chr1_2:19351810-19351829 | Msa0061290:intron | 40.0% | |
| TGGCGATGTATCTTGATCTT+GGG | + | chr1_2:19352061-19352080 | None:intergenic | 40.0% | |
| !! | TCTTTAACGGACTAATCTGG+TGG | + | chr1_2:19352107-19352126 | None:intergenic | 40.0% |
| GGCGACACTTCAATCTTTAA+CGG | + | chr1_2:19352120-19352139 | None:intergenic | 40.0% | |
| ! | TGTAACAACGGCGTATTTTG+AGG | + | chr1_2:19352151-19352170 | None:intergenic | 40.0% |
| ! | ATATGGCGACACTGATCTTT+TGG | - | chr1_2:19352281-19352300 | Msa0061290:intron | 40.0% |
| !! | GATCTTTTGGAGATCTAGTC+AGG | - | chr1_2:19352294-19352313 | Msa0061290:intron | 40.0% |
| !! | TCTTTTGGAGATCTAGTCAG+GGG | - | chr1_2:19352296-19352315 | Msa0061290:intron | 40.0% |
| AAGGAAAAACAGTAGACTGG+TGG | - | chr1_2:19352418-19352437 | Msa0061290:intron | 40.0% | |
| AGGAAAAACAGTAGACTGGT+GGG | - | chr1_2:19352419-19352438 | Msa0061290:intron | 40.0% | |
| !! | CACTGACTCTAAAGGGATAA+TGG | - | chr1_2:19352524-19352543 | Msa0061290:intron | 40.0% |
| CACTAGCATAACATGCTTTG+GGG | + | chr1_2:19352568-19352587 | None:intergenic | 40.0% | |
| GCACTAGCATAACATGCTTT+GGG | + | chr1_2:19352569-19352588 | None:intergenic | 40.0% | |
| TGCACTAGCATAACATGCTT+TGG | + | chr1_2:19352570-19352589 | None:intergenic | 40.0% | |
| AAGCATGTTATGCTAGTGCA+TGG | - | chr1_2:19352570-19352589 | Msa0061290:intron | 40.0% | |
| CAATTTCGTTGTTTGCAGGA+TGG | + | chr1_2:19352659-19352678 | None:intergenic | 40.0% | |
| GTTTCAGAAATGCAGTTCAG+TGG | - | chr1_2:19352758-19352777 | Msa0061290:intron | 40.0% | |
| ATGTTGGACGAAAAGAAGCA+CGG | - | chr1_2:19352924-19352943 | Msa0061290:CDS | 40.0% | |
| !! | CATTGTAGAGCTCTGAGTTA+TGG | - | chr1_2:19353200-19353219 | Msa0061290:CDS | 40.0% |
| ! | TGAATTAACAGAGCACCAGA+TGG | - | chr1_2:19353226-19353245 | Msa0061290:intron | 40.0% |
| GTGTTTATGATGCTGGAGAA+AGG | - | chr1_2:19353416-19353435 | Msa0061290:five_prime_UTR | 40.0% | |
| AGAAGAAAACGCAGGTTTGG+AGG | - | chr1_2:19341982-19342001 | Msa0061290:three_prime_UTR | 45.0% | |
| TTCAATAAACGTGCAGGTGC+TGG | - | chr1_2:19342224-19342243 | Msa0061290:three_prime_UTR | 45.0% | |
| TTGATGTTGGTGCAGTCACT+TGG | - | chr1_2:19342491-19342510 | Msa0061290:three_prime_UTR | 45.0% | |
| TGCAGTCACTTGGATCATGT+TGG | - | chr1_2:19342501-19342520 | Msa0061290:exon | 45.0% | |
| ACTGAAGTTTGTGGGTACAG+TGG | - | chr1_2:19342540-19342559 | Msa0061290:CDS | 45.0% | |
| TGGACCAGTTTATATGACGG+TGG | - | chr1_2:19342560-19342579 | Msa0061290:CDS | 45.0% | |
| GGACCAGTTTATATGACGGT+GGG | - | chr1_2:19342561-19342580 | Msa0061290:CDS | 45.0% | |
| !! | TCAAACGAGAAGTGTCAGGA+AGG | + | chr1_2:19342783-19342802 | None:intergenic | 45.0% |
| !! | AGTGTCAAACGAGAAGTGTC+AGG | + | chr1_2:19342787-19342806 | None:intergenic | 45.0% |
| AGCTAATCCAAACACACCCT+TGG | - | chr1_2:19343117-19343136 | Msa0061290:intron | 45.0% | |
| TAATCCAAACACACCCTTGG+TGG | - | chr1_2:19343120-19343139 | Msa0061290:intron | 45.0% | |
| CAATGCATGCATTCCACCAA+GGG | + | chr1_2:19343136-19343155 | None:intergenic | 45.0% | |
| ACAATGCATGCATTCCACCA+AGG | + | chr1_2:19343137-19343156 | None:intergenic | 45.0% | |
| GCTGTTCCAGTCAATGCTTA+TGG | - | chr1_2:19343680-19343699 | Msa0061290:intron | 45.0% | |
| ! | ATGTTTAAGCACTGCCTCCT+TGG | - | chr1_2:19343711-19343730 | Msa0061290:intron | 45.0% |
| ! | GGAAGACTTTCGGAAAGTGT+TGG | - | chr1_2:19343818-19343837 | Msa0061290:intron | 45.0% |
| !! | GGAAAGTGTTGGTTGATCGT+CGG | - | chr1_2:19343829-19343848 | Msa0061290:intron | 45.0% |
| !! | GAAAGTGTTGGTTGATCGTC+GGG | - | chr1_2:19343830-19343849 | Msa0061290:intron | 45.0% |
| !! | AAAGTGTTGGTTGATCGTCG+GGG | - | chr1_2:19343831-19343850 | Msa0061290:intron | 45.0% |
| TATGCAGCTACTGTGTCACA+AGG | - | chr1_2:19344044-19344063 | Msa0061290:CDS | 45.0% | |
| !! | TGGTGATTTTGGGTGGGAAT+CGG | + | chr1_2:19344275-19344294 | None:intergenic | 45.0% |
| !! | GTCAGAGGTGTGGTGATTTT+GGG | + | chr1_2:19344285-19344304 | None:intergenic | 45.0% |
| !! | TGTCAGAGGTGTGGTGATTT+TGG | + | chr1_2:19344286-19344305 | None:intergenic | 45.0% |
| AGATGCTAATGTCAGAGGTG+TGG | + | chr1_2:19344295-19344314 | None:intergenic | 45.0% | |
| ! | TTGCAAGAGGTTGATCCATC+AGG | - | chr1_2:19344730-19344749 | Msa0061290:intron | 45.0% |
| GAAGAGCTTCAATAGCTCAG+TGG | + | chr1_2:19345239-19345258 | None:intergenic | 45.0% | |
| AATGCTAAGGTTGGGCTATC+AGG | + | chr1_2:19345316-19345335 | None:intergenic | 45.0% | |
| AAAAGTGGGAGACGCAGAAA+TGG | - | chr1_2:19345569-19345588 | Msa0061290:intron | 45.0% | |
| ATGACACCAGATAGACACCT+AGG | - | chr1_2:19345612-19345631 | Msa0061290:intron | 45.0% | |
| TTCACTCCTACATGACGAAG+TGG | - | chr1_2:19346112-19346131 | Msa0061290:intron | 45.0% | |
| TCATAGCCACTTCGTCATGT+AGG | + | chr1_2:19346121-19346140 | None:intergenic | 45.0% | |
| ACAAGCAGTGAGTGCAAAAC+AGG | + | chr1_2:19346399-19346418 | None:intergenic | 45.0% | |
| ATTCAAAATGCGCTCGAGAG+AGG | - | chr1_2:19346505-19346524 | Msa0061290:intron | 45.0% | |
| TTCAAAATGCGCTCGAGAGA+GGG | - | chr1_2:19346506-19346525 | Msa0061290:intron | 45.0% | |
| GTAAAGAAGGAATGGTGCTC+TGG | - | chr1_2:19346726-19346745 | Msa0061290:intron | 45.0% | |
| GAGGGTGGTAACTAGTAGTT+TGG | + | chr1_2:19347034-19347053 | None:intergenic | 45.0% | |
| !!! | GCCATTGACTCTAGCGTTTT+AGG | - | chr1_2:19347435-19347454 | Msa0061290:intron | 45.0% |
| GGATAGTCTGGAAGTTTGGT+TGG | - | chr1_2:19347545-19347564 | Msa0061290:intron | 45.0% | |
| CAATAAAACAAGGGGACTGC+AGG | + | chr1_2:19347596-19347615 | None:intergenic | 45.0% | |
| AAATCTTGGCACTAGCACAC+AGG | + | chr1_2:19347690-19347709 | None:intergenic | 45.0% | |
| !! | ATGTGTTTCTGGAGGAGGAA+AGG | - | chr1_2:19348139-19348158 | Msa0061290:intron | 45.0% |
| GCTCTTCCAAGAGCAAATGT+TGG | + | chr1_2:19348173-19348192 | None:intergenic | 45.0% | |
| ATTTGCTCTTGGAAGAGCTC+AGG | - | chr1_2:19348175-19348194 | Msa0061290:intron | 45.0% | |
| !! | TGTCCCTTTGAAAGAGCGTT+AGG | + | chr1_2:19348289-19348308 | None:intergenic | 45.0% |
| TTCAAAGGGACAACATGAGG+GGG | - | chr1_2:19348297-19348316 | Msa0061290:intron | 45.0% | |
| ! | CACCGAAACTTTGCTTTAGG+GGG | - | chr1_2:19349012-19349031 | Msa0061290:intron | 45.0% |
| ATCCACCAGTTCCAACTAGT+GGG | + | chr1_2:19349600-19349619 | None:intergenic | 45.0% | |
| CACAAGAATGCTCGAACACA+AGG | + | chr1_2:19349717-19349736 | None:intergenic | 45.0% | |
| CTTGTGTTCGAGCATTCTTG+TGG | - | chr1_2:19349715-19349734 | Msa0061290:intron | 45.0% | |
| TTTCCTGACAGCACAAAAGG+GGG | - | chr1_2:19349835-19349854 | Msa0061290:CDS | 45.0% | |
| ! | ACAGCACAAAAGGGGGATTT+TGG | - | chr1_2:19349842-19349861 | Msa0061290:CDS | 45.0% |
| ! | CAGCACAAAAGGGGGATTTT+GGG | - | chr1_2:19349843-19349862 | Msa0061290:CDS | 45.0% |
| ! | AGCACAAAAGGGGGATTTTG+GGG | - | chr1_2:19349844-19349863 | Msa0061290:CDS | 45.0% |
| ATAGTAAGTGATGCAGGCGA+AGG | - | chr1_2:19349898-19349917 | Msa0061290:CDS | 45.0% | |
| ! | GGGTAACTTAGTCGACTTTG+TGG | - | chr1_2:19349935-19349954 | Msa0061290:intron | 45.0% |
| GCTGTCAATAGTACCCTAGA+AGG | - | chr1_2:19349983-19350002 | Msa0061290:intron | 45.0% | |
| ! | CCATTCAGCTTTGACCTTCT+AGG | + | chr1_2:19350000-19350019 | None:intergenic | 45.0% |
| CCTAGAAGGTCAAAGCTGAA+TGG | - | chr1_2:19349997-19350016 | Msa0061290:intron | 45.0% | |
| AGATGACATGCCTAATGAGG+TGG | + | chr1_2:19350086-19350105 | None:intergenic | 45.0% | |
| AGGTCTATGTTAGATGCTCC+TGG | - | chr1_2:19350564-19350583 | Msa0061290:intron | 45.0% | |
| AATCCACCAAGTATCATCCC+AGG | + | chr1_2:19350612-19350631 | None:intergenic | 45.0% | |
| ! | ACTTGGTACGGATAGTTTGC+TGG | - | chr1_2:19350886-19350905 | Msa0061290:intron | 45.0% |
| !!! | CGGATAGTTTGCTGGTTTTG+TGG | - | chr1_2:19350894-19350913 | Msa0061290:intron | 45.0% |
| !!! | TGCTGGTTTTGTGGCAACAT+AGG | - | chr1_2:19350903-19350922 | Msa0061290:intron | 45.0% |
| !!! | GCTGGTTTTGTGGCAACATA+GGG | - | chr1_2:19350904-19350923 | Msa0061290:intron | 45.0% |
| !!! | CTGGTTTTGTGGCAACATAG+GGG | - | chr1_2:19350905-19350924 | Msa0061290:intron | 45.0% |
| AGGGGCTTTCCTTATTAGTC+TGG | - | chr1_2:19350984-19351003 | Msa0061290:intron | 45.0% | |
| !! | CTGGAAATTTGGGGTTTTGG+GGG | - | chr1_2:19351003-19351022 | Msa0061290:intron | 45.0% |
| !!! | CAGTTCCGTGTTGGTTTTGT+AGG | - | chr1_2:19351384-19351403 | Msa0061290:intron | 45.0% |
| GGGATCTGTATCAACTTTGG+TGG | + | chr1_2:19351456-19351475 | None:intergenic | 45.0% | |
| CGCACATCTATCTGAGTATC+GGG | + | chr1_2:19351476-19351495 | None:intergenic | 45.0% | |
| GGTGGGAGATAAAATGTACC+TGG | + | chr1_2:19351502-19351521 | None:intergenic | 45.0% | |
| GGCACAAGCATTAGCTGAAA+TGG | + | chr1_2:19351856-19351875 | None:intergenic | 45.0% | |
| GTGGCGATGTATCTTGATCT+TGG | + | chr1_2:19352062-19352081 | None:intergenic | 45.0% | |
| !! | AGATTGAAGTGTCGCCGTAT+CGG | - | chr1_2:19352124-19352143 | Msa0061290:intron | 45.0% |
| !! | GCGTATTTTGAGGACCGATA+CGG | + | chr1_2:19352141-19352160 | None:intergenic | 45.0% |
| !! | AGTCCTCACACTGACTCTAA+AGG | - | chr1_2:19352516-19352535 | Msa0061290:intron | 45.0% |
| !! | GTCCTCACACTGACTCTAAA+GGG | - | chr1_2:19352517-19352536 | Msa0061290:intron | 45.0% |
| !! | ATCCCTTTAGAGTCAGTGTG+AGG | + | chr1_2:19352522-19352541 | None:intergenic | 45.0% |
| TTGTTTGCAGGATGGGAACA+CGG | + | chr1_2:19352651-19352670 | None:intergenic | 45.0% | |
| GACGCTTCTGCATTTACGTA+CGG | + | chr1_2:19352699-19352718 | None:intergenic | 45.0% | |
| GAAGATGAAAGAGCAGCAGA+TGG | - | chr1_2:19352834-19352853 | Msa0061290:intron | 45.0% | |
| ! | AAGAGCAGCAGATGGAGTTT+TGG | - | chr1_2:19352842-19352861 | Msa0061290:intron | 45.0% |
| !! | AGCAGATGGAGTTTTGGTCA+TGG | - | chr1_2:19352848-19352867 | Msa0061290:intron | 45.0% |
| ! | TGTTGGACGAAAAGAAGCAC+GGG | - | chr1_2:19352925-19352944 | Msa0061290:CDS | 45.0% |
| TAACTGTTTCCCTCGAGATC+AGG | + | chr1_2:19353047-19353066 | None:intergenic | 45.0% | |
| TGCTTCAAAAGAGAGATGCG+CGG | + | chr1_2:19353103-19353122 | None:intergenic | 45.0% | |
| GGCTCTTGTGTTTATGATGC+TGG | - | chr1_2:19353409-19353428 | Msa0061290:five_prime_UTR | 45.0% | |
| !! | TAACAATTTATAATAAAAAT+AGG | + | chr1_2:19345521-19345540 | None:intergenic | 5.0% |
| !!! | ATTTTTATTATAAATTGTTA+AGG | - | chr1_2:19345521-19345540 | Msa0061290:intron | 5.0% |
| !! | TTATTATTTAGATATTTAAT+TGG | - | chr1_2:19353489-19353508 | Msa0061290:five_prime_UTR | 5.0% |
| !! | TATTATTTAGATATTTAATT+GGG | - | chr1_2:19353490-19353509 | Msa0061290:five_prime_UTR | 5.0% |
| AATGGTTGCACAGCACTTGC+AGG | + | chr1_2:19342098-19342117 | None:intergenic | 50.0% | |
| CGACCCACCGTCATATAAAC+TGG | + | chr1_2:19342567-19342586 | None:intergenic | 50.0% | |
| GTAGGACCCACCATTTCATG+CGG | - | chr1_2:19342685-19342704 | Msa0061290:CDS | 50.0% | |
| AACATGGCAGCCGCATGAAA+TGG | + | chr1_2:19342698-19342717 | None:intergenic | 50.0% | |
| ! | CATTCCACCAAGGGTGTGTT+TGG | + | chr1_2:19343127-19343146 | None:intergenic | 50.0% |
| TCAATCCAGAGCCGCACATT+CGG | + | chr1_2:19343444-19343463 | None:intergenic | 50.0% | |
| !! | GAGGTGTGGTGATTTTGGGT+GGG | + | chr1_2:19344281-19344300 | None:intergenic | 50.0% |
| !! | AGAGGTGTGGTGATTTTGGG+TGG | + | chr1_2:19344282-19344301 | None:intergenic | 50.0% |
| GTTGAAAGTCTGGAAGGGGT+AGG | - | chr1_2:19344641-19344660 | Msa0061290:intron | 50.0% | |
| ACACACACACACATTCCCTC+TGG | - | chr1_2:19344907-19344926 | Msa0061290:intron | 50.0% | |
| ACACGCAACGCTACTTCACA+TGG | + | chr1_2:19345348-19345367 | None:intergenic | 50.0% | |
| ACCAGATAGACACCTAGGAG+CGG | - | chr1_2:19345617-19345636 | Msa0061290:intron | 50.0% | |
| GATCAATTTGAGCCGCTCCT+AGG | + | chr1_2:19345632-19345651 | None:intergenic | 50.0% | |
| GTTAGGGGCAGACCAATGAT+TGG | + | chr1_2:19345857-19345876 | None:intergenic | 50.0% | |
| CTTGGGTAGTTACAGAGGGT+AGG | + | chr1_2:19347094-19347113 | None:intergenic | 50.0% | |
| ACATGAGGGGGAGGAAAAGT+AGG | - | chr1_2:19348309-19348328 | Msa0061290:intron | 50.0% | |
| ! | CTGGGAGCGCATGAATTTGA+AGG | - | chr1_2:19348877-19348896 | Msa0061290:intron | 50.0% |
| TTCCCACTAGTTGGAACTGG+TGG | - | chr1_2:19349595-19349614 | Msa0061290:intron | 50.0% | |
| GATCCACCAGTTCCAACTAG+TGG | + | chr1_2:19349601-19349620 | None:intergenic | 50.0% | |
| ! | AATCCCCCTTTTGTGCTGTC+AGG | + | chr1_2:19349841-19349860 | None:intergenic | 50.0% |
| ! | GCACAAAAGGGGGATTTTGG+GGG | - | chr1_2:19349845-19349864 | Msa0061290:CDS | 50.0% |
| AGTATGTCGGCCACCTCATT+AGG | - | chr1_2:19350073-19350092 | Msa0061290:intron | 50.0% | |
| GCTATAATAGCCGAGAACGG+AGG | - | chr1_2:19350455-19350474 | Msa0061290:intron | 50.0% | |
| TGTTCTACGTCTCACTCTCC+TGG | - | chr1_2:19350513-19350532 | Msa0061290:intron | 50.0% | |
| TACGTCTCACTCTCCTGGTT+TGG | - | chr1_2:19350518-19350537 | Msa0061290:intron | 50.0% | |
| TGAACTGCAGCATCCAAACC+AGG | + | chr1_2:19350534-19350553 | None:intergenic | 50.0% | |
| GCAAAGAGAACACAAGGACC+AGG | + | chr1_2:19350585-19350604 | None:intergenic | 50.0% | |
| GGAGTGGCAAAGAGAACACA+AGG | + | chr1_2:19350591-19350610 | None:intergenic | 50.0% | |
| TGTGTTCTCTTTGCCACTCC+TGG | - | chr1_2:19350591-19350610 | Msa0061290:intron | 50.0% | |
| GTGTTCTCTTTGCCACTCCT+GGG | - | chr1_2:19350592-19350611 | Msa0061290:intron | 50.0% | |
| ACCAAGTATCATCCCAGGAG+TGG | + | chr1_2:19350607-19350626 | None:intergenic | 50.0% | |
| ACTCCTGGGATGATACTTGG+TGG | - | chr1_2:19350606-19350625 | Msa0061290:intron | 50.0% | |
| ATAGGGGACATGCCTTCACT+AGG | - | chr1_2:19350921-19350940 | Msa0061290:intron | 50.0% | |
| TCAGATAGATGTGCGTTGCC+AGG | - | chr1_2:19351481-19351500 | Msa0061290:intron | 50.0% | |
| GCATGGTGAGAAGCCTAAGA+TGG | - | chr1_2:19352587-19352606 | Msa0061290:intron | 50.0% | |
| ! | GTTGGACGAAAAGAAGCACG+GGG | - | chr1_2:19352926-19352945 | Msa0061290:CDS | 50.0% |
| TTTGTGGTGCCTGATCTCGA+GGG | - | chr1_2:19353035-19353054 | Msa0061290:intron | 50.0% | |
| !! | GCAGGTGCTGGTCAAGAAGT+TGG | - | chr1_2:19342236-19342255 | Msa0061290:three_prime_UTR | 55.0% |
| TGGCAGCCGCATGAAATGGT+GGG | + | chr1_2:19342694-19342713 | None:intergenic | 55.0% | |
| ATGGCAGCCGCATGAAATGG+TGG | + | chr1_2:19342695-19342714 | None:intergenic | 55.0% | |
| CAATCCAGAGCCGCACATTC+GGG | + | chr1_2:19343443-19343462 | None:intergenic | 55.0% | |
| CGCAACGCTACTTCACATGG+AGG | + | chr1_2:19345345-19345364 | None:intergenic | 55.0% | |
| TACGTGGAAGTTGCCCCTAC+AGG | + | chr1_2:19346891-19346910 | None:intergenic | 55.0% | |
| ACTTCCACGTAACGTCGTCC+AGG | - | chr1_2:19346900-19346919 | Msa0061290:intron | 55.0% | |
| CTTCCACGTAACGTCGTCCA+GGG | - | chr1_2:19346901-19346920 | Msa0061290:intron | 55.0% | |
| TAGAAGAGAGGAGAGGAGGG+TGG | + | chr1_2:19347049-19347068 | None:intergenic | 55.0% | |
| TCTTGGCACTAGCACACAGG+AGG | + | chr1_2:19347687-19347706 | None:intergenic | 55.0% | |
| AAAGGGACAACATGAGGGGG+AGG | - | chr1_2:19348300-19348319 | Msa0061290:intron | 55.0% | |
| TGAGGGGGAGGAAAAGTAGG+CGG | - | chr1_2:19348312-19348331 | Msa0061290:intron | 55.0% | |
| GCCACTCCTGGGATGATACT+TGG | - | chr1_2:19350603-19350622 | Msa0061290:intron | 55.0% | |
| AACAGTAGACTGGTGGGACG+TGG | - | chr1_2:19352425-19352444 | Msa0061290:intron | 55.0% | |
| CTTTGTGGTGCCTGATCTCG+AGG | - | chr1_2:19353034-19353053 | Msa0061290:intron | 55.0% | |
| GTTTCCCGAATGTGCGGCTC+TGG | - | chr1_2:19343436-19343455 | Msa0061290:intron | 60.0% | |
| GTTGGTTGATCGTCGGGGTG+AGG | - | chr1_2:19343836-19343855 | Msa0061290:intron | 60.0% | |
| GCCGCTCCTAGGTGTCTATC+TGG | + | chr1_2:19345621-19345640 | None:intergenic | 60.0% | |
| CATCCCTGGACGACGTTACG+TGG | + | chr1_2:19346907-19346926 | None:intergenic | 60.0% | |
| GAGGGGGAGGAAAAGTAGGC+GGG | - | chr1_2:19348313-19348332 | Msa0061290:intron | 60.0% | |
| GTAGACTGGTGGGACGTGGA+AGG | - | chr1_2:19352429-19352448 | Msa0061290:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 19341935 | 19353538 | 19341935 | ID=Msa0061290;Name=Msa0061290 |
| chr1_2 | mRNA | 19341935 | 19353538 | 19341935 | ID=Msa0061290-mRNA-1;Parent=Msa0061290;Name=Msa0061290-mRNA-1;_AED=0.08;_eAED=0.08;_QI=159|0.92|0.92|1|0.84|0.85|14|585|530 |
| chr1_2 | exon | 19341935 | 19342975 | 19341935 | ID=Msa0061290-mRNA-1:exon:7516;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19343971 | 19344067 | 19343971 | ID=Msa0061290-mRNA-1:exon:7515;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19344782 | 19344923 | 19344782 | ID=Msa0061290-mRNA-1:exon:7514;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19345974 | 19346078 | 19345974 | ID=Msa0061290-mRNA-1:exon:7513;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19346553 | 19346622 | 19346553 | ID=Msa0061290-mRNA-1:exon:7512;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19347277 | 19347342 | 19347277 | ID=Msa0061290-mRNA-1:exon:7511;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19348931 | 19348994 | 19348931 | ID=Msa0061290-mRNA-1:exon:7510;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19349794 | 19349930 | 19349794 | ID=Msa0061290-mRNA-1:exon:7509;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19351031 | 19351104 | 19351031 | ID=Msa0061290-mRNA-1:exon:7508;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19351570 | 19351687 | 19351570 | ID=Msa0061290-mRNA-1:exon:7507;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19352907 | 19352967 | 19352907 | ID=Msa0061290-mRNA-1:exon:7506;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19353056 | 19353233 | 19353056 | ID=Msa0061290-mRNA-1:exon:7505;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19353322 | 19353436 | 19353322 | ID=Msa0061290-mRNA-1:exon:7504;Parent=Msa0061290-mRNA-1 |
| chr1_2 | exon | 19353470 | 19353538 | 19353470 | ID=Msa0061290-mRNA-1:exon:7503;Parent=Msa0061290-mRNA-1 |
| chr1_2 | five_prime_UTR | 19353470 | 19353538 | 19353470 | ID=Msa0061290-mRNA-1:five_prime_utr;Parent=Msa0061290-mRNA-1 |
| chr1_2 | five_prime_UTR | 19353347 | 19353436 | 19353347 | ID=Msa0061290-mRNA-1:five_prime_utr;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19353322 | 19353346 | 19353322 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19353056 | 19353233 | 19353056 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19352907 | 19352967 | 19352907 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19351570 | 19351687 | 19351570 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19351031 | 19351104 | 19351031 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19349794 | 19349930 | 19349794 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19348931 | 19348994 | 19348931 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19347277 | 19347342 | 19347277 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19346553 | 19346622 | 19346553 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19345974 | 19346078 | 19345974 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19344782 | 19344923 | 19344782 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19343971 | 19344067 | 19343971 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | CDS | 19342520 | 19342975 | 19342520 | ID=Msa0061290-mRNA-1:cds;Parent=Msa0061290-mRNA-1 |
| chr1_2 | three_prime_UTR | 19341935 | 19342519 | 19341935 | ID=Msa0061290-mRNA-1:three_prime_utr;Parent=Msa0061290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
