Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270030 | sp|Q9M2E2|SDR1_ARATH | 57.143 | 182 | 76 | 2 | 1 | 180 | 1 | 182 | 5.20e-65 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270030 | G7LBT1 | 97.619 | 168 | 4 | 0 | 1 | 168 | 1 | 168 | 1.36e-112 | 331 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0366510 | Msa1270030 | 0.800470 | 1.419923e-48 | -8.615850e-47 |
| Msa0481410 | Msa1270030 | 0.807980 | 3.876586e-50 | -8.615850e-47 |
| Msa0261400 | Msa1270030 | 0.800346 | 1.504668e-48 | -8.615850e-47 |
| Msa0307040 | Msa1270030 | 0.804737 | 1.871068e-49 | -8.615850e-47 |
| Msa0918140 | Msa1270030 | 0.813575 | 2.387585e-51 | -8.615850e-47 |
| Msa0964510 | Msa1270030 | 0.809891 | 1.512157e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270030 | MtrunA17_Chr8g0349721 | 97.619 | 168 | 4 | 0 | 1 | 168 | 1 | 168 | 2.63e-116 | 331 |
| Msa1270030 | MtrunA17_Chr8g0349701 | 96.429 | 168 | 6 | 0 | 1 | 168 | 1 | 168 | 1.52e-114 | 327 |
| Msa1270030 | MtrunA17_Chr7g0247041 | 68.902 | 164 | 49 | 2 | 7 | 168 | 6 | 169 | 1.82e-72 | 220 |
| Msa1270030 | MtrunA17_Chr8g0349751 | 61.272 | 173 | 62 | 2 | 1 | 168 | 51 | 223 | 2.94e-67 | 209 |
| Msa1270030 | MtrunA17_Chr8g0349671 | 57.895 | 171 | 69 | 1 | 1 | 168 | 1 | 171 | 8.91e-66 | 203 |
| Msa1270030 | MtrunA17_Chr8g0349641 | 57.558 | 172 | 68 | 2 | 1 | 168 | 1 | 171 | 3.57e-64 | 199 |
| Msa1270030 | MtrunA17_Chr8g0349801 | 57.542 | 179 | 69 | 3 | 1 | 174 | 1 | 177 | 2.84e-63 | 197 |
| Msa1270030 | MtrunA17_Chr8g0349851 | 58.046 | 174 | 67 | 2 | 1 | 168 | 1 | 174 | 1.83e-62 | 195 |
| Msa1270030 | MtrunA17_Chr8g0349781 | 57.225 | 173 | 69 | 2 | 1 | 168 | 1 | 173 | 5.48e-61 | 191 |
| Msa1270030 | MtrunA17_Chr8g0349771 | 55.491 | 173 | 72 | 2 | 1 | 168 | 1 | 173 | 6.59e-61 | 191 |
| Msa1270030 | MtrunA17_Chr8g0349761 | 57.485 | 167 | 66 | 2 | 7 | 168 | 8 | 174 | 9.15e-61 | 191 |
| Msa1270030 | MtrunA17_Chr5g0425391 | 55.233 | 172 | 74 | 1 | 1 | 169 | 1 | 172 | 1.52e-60 | 190 |
| Msa1270030 | MtrunA17_Chr8g0349811 | 57.225 | 173 | 69 | 2 | 1 | 168 | 1 | 173 | 4.54e-60 | 189 |
| Msa1270030 | MtrunA17_Chr7g0247011 | 57.055 | 163 | 63 | 3 | 1 | 163 | 1 | 156 | 1.53e-57 | 182 |
| Msa1270030 | MtrunA17_Chr8g0349831 | 56.977 | 172 | 68 | 3 | 3 | 168 | 4 | 175 | 2.36e-57 | 182 |
| Msa1270030 | MtrunA17_Chr8g0349741 | 56.213 | 169 | 66 | 4 | 1 | 168 | 1 | 162 | 2.83e-57 | 181 |
| Msa1270030 | MtrunA17_Chr3g0118511 | 52.907 | 172 | 70 | 4 | 7 | 168 | 3 | 173 | 3.70e-48 | 158 |
| Msa1270030 | MtrunA17_Chr7g0267881 | 49.701 | 167 | 55 | 2 | 7 | 168 | 9 | 151 | 1.05e-46 | 152 |
| Msa1270030 | MtrunA17_Chr7g0247031 | 50.000 | 164 | 72 | 5 | 7 | 168 | 8 | 163 | 1.42e-43 | 146 |
| Msa1270030 | MtrunA17_Chr8g0349651 | 50.704 | 142 | 65 | 2 | 31 | 168 | 10 | 150 | 9.85e-42 | 141 |
| Msa1270030 | MtrunA17_Chr3g0131521 | 41.718 | 163 | 73 | 3 | 9 | 170 | 37 | 178 | 1.65e-33 | 120 |
| Msa1270030 | MtrunA17_Chr1g0160511 | 39.130 | 161 | 76 | 3 | 9 | 168 | 42 | 181 | 1.09e-32 | 119 |
| Msa1270030 | MtrunA17_Chr8g0385581 | 35.583 | 163 | 86 | 3 | 9 | 170 | 39 | 183 | 2.01e-24 | 97.1 |
| Msa1270030 | MtrunA17_Chr4g0045711 | 48.276 | 87 | 40 | 3 | 9 | 90 | 24 | 110 | 3.63e-15 | 68.2 |
| Msa1270030 | MtrunA17_Chr6g0466681 | 30.380 | 158 | 81 | 3 | 10 | 162 | 70 | 203 | 9.10e-12 | 62.4 |
| Msa1270030 | MtrunA17_Chr4g0054341 | 27.273 | 176 | 102 | 5 | 4 | 177 | 2 | 153 | 1.98e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1270030 | AT3G61220.1 | 57.143 | 182 | 76 | 2 | 1 | 180 | 1 | 182 | 5.29e-66 | 204 |
| Msa1270030 | AT2G24190.1 | 57.647 | 170 | 70 | 2 | 1 | 168 | 1 | 170 | 5.65e-65 | 201 |
| Msa1270030 | AT3G61220.2 | 57.955 | 176 | 72 | 2 | 7 | 180 | 14 | 189 | 5.27e-64 | 199 |
| Msa1270030 | AT3G61220.3 | 57.955 | 176 | 72 | 2 | 7 | 180 | 38 | 213 | 1.20e-63 | 199 |
| Msa1270030 | AT2G24190.2 | 57.927 | 164 | 67 | 2 | 7 | 168 | 12 | 175 | 6.66e-63 | 196 |
| Msa1270030 | AT1G01800.1 | 51.479 | 169 | 78 | 3 | 4 | 168 | 2 | 170 | 9.98e-53 | 170 |
| Msa1270030 | AT5G61830.1 | 45.342 | 161 | 64 | 4 | 9 | 166 | 39 | 178 | 1.46e-32 | 119 |
| Msa1270030 | AT5G61830.2 | 45.342 | 161 | 64 | 4 | 9 | 166 | 39 | 178 | 1.46e-32 | 119 |
| Msa1270030 | AT3G59710.2 | 43.038 | 158 | 69 | 4 | 9 | 165 | 50 | 187 | 9.29e-31 | 114 |
| Msa1270030 | AT3G59710.3 | 42.500 | 160 | 71 | 4 | 9 | 167 | 21 | 160 | 1.02e-30 | 113 |
| Msa1270030 | AT3G59710.1 | 43.038 | 158 | 69 | 4 | 9 | 165 | 31 | 168 | 1.16e-30 | 113 |
| Msa1270030 | AT5G51030.1 | 35.152 | 165 | 85 | 3 | 5 | 168 | 36 | 179 | 9.11e-29 | 108 |
| Msa1270030 | AT1G01800.2 | 44.444 | 81 | 43 | 1 | 90 | 168 | 55 | 135 | 1.48e-15 | 72.8 |
| Msa1270030 | AT5G50700.1 | 33.333 | 153 | 83 | 4 | 10 | 162 | 51 | 184 | 8.08e-14 | 68.6 |
| Msa1270030 | AT5G50600.1 | 33.333 | 153 | 83 | 4 | 10 | 162 | 51 | 184 | 8.08e-14 | 68.6 |
| Msa1270030 | AT3G47350.1 | 31.373 | 153 | 86 | 4 | 10 | 162 | 50 | 183 | 2.83e-11 | 61.2 |
| Msa1270030 | AT3G47350.2 | 30.769 | 156 | 89 | 4 | 7 | 162 | 47 | 183 | 3.14e-11 | 61.2 |
Find 35 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTTCATCAAAATCCAATT+TGG | 0.251329 | 8_3:-3413668 | Msa1270030:CDS |
| TTATGGGATATGCAAGAAAT+TGG | 0.259442 | 8_3:-3413840 | Msa1270030:CDS |
| AGATATCAAGCTTCCCAAAT+TGG | 0.260041 | 8_3:+3413654 | None:intergenic |
| TGGAGAGAATGTTGTTAAAA+AGG | 0.269327 | 8_3:-3413505 | Msa1270030:intron |
| ACTTGTAACAGGAGCTAATA+AGG | 0.275992 | 8_3:-3413870 | Msa1270030:CDS |
| TGTGTAGAAATAAACTTCTT+TGG | 0.305048 | 8_3:-3412023 | Msa1270030:CDS |
| GCTAATAAGGGAATTGGTTA+TGG | 0.306274 | 8_3:-3413857 | Msa1270030:CDS |
| GTGAACAATGCTGGTGTTGC+TGG | 0.318704 | 8_3:-3413540 | Msa1270030:CDS |
| TCTAGGTATGCACTTGTAAC+AGG | 0.329038 | 8_3:-3413881 | Msa1270030:intron |
| ATTTGGGAAGCTTGATATCT+TGG | 0.349168 | 8_3:-3413651 | Msa1270030:intron |
| ATTGGCTTCAAGAGGTGTTA+TGG | 0.387557 | 8_3:-3413822 | Msa1270030:CDS |
| GTAGAAAGTTTGAAAGAGTT+AGG | 0.388081 | 8_3:-3413758 | Msa1270030:CDS |
| CAATGACAGAAGCATCAAAA+AGG | 0.391122 | 8_3:-3414006 | Msa1270030:intron |
| AGTTCATCAAAATCCAATTT+GGG | 0.398379 | 8_3:-3413667 | Msa1270030:CDS |
| ACTAAAGAAGAAACACTTGT+AGG | 0.407989 | 8_3:+3413692 | None:intergenic |
| ACAGGAGCTAATAAGGGAAT+TGG | 0.408672 | 8_3:-3413863 | Msa1270030:CDS |
| CTCTAGACGTGGACAATTCA+AGG | 0.411127 | 8_3:-3411928 | Msa1270030:CDS |
| GTTTATTTCTACACATTCTT+CGG | 0.422875 | 8_3:+3412031 | None:intergenic |
| AGAGGAGACATTAACAATCC+TGG | 0.437672 | 8_3:+3411947 | None:intergenic |
| CTAATAAGGGAATTGGTTAT+GGG | 0.448020 | 8_3:-3413856 | Msa1270030:CDS |
| CTAAAGAAGAAACACTTGTA+GGG | 0.491807 | 8_3:+3413693 | None:intergenic |
| ACTGCTAGAAATGAGAAAAG+AGG | 0.505341 | 8_3:-3413791 | Msa1270030:CDS |
| TGAAGTAGATAGTTGGAGCA+AGG | 0.513117 | 8_3:+3411971 | None:intergenic |
| TCCTGGGTGAAGTAGATAGT+TGG | 0.520218 | 8_3:+3411964 | None:intergenic |
| TAAGGGGTGAAATATCTGAT+TGG | 0.521800 | 8_3:-3412085 | Msa1270030:CDS |
| GAGGAGACATTAACAATCCT+GGG | 0.537675 | 8_3:+3411948 | None:intergenic |
| CTTGTAACAGGAGCTAATAA+GGG | 0.542533 | 8_3:-3413869 | Msa1270030:CDS |
| CTTGAATTGTCCACGTCTAG+AGG | 0.553769 | 8_3:+3411929 | None:intergenic |
| GAAGTAGATAGTTGGAGCAA+GGG | 0.569135 | 8_3:+3411972 | None:intergenic |
| TTGGTGTAGGTGAACAATGC+TGG | 0.578381 | 8_3:-3413549 | Msa1270030:intron |
| TGCAAGAAATTGGCTTCAAG+AGG | 0.591172 | 8_3:-3413830 | Msa1270030:CDS |
| GTTGCTGGAGGAATAGTGAA+TGG | 0.611511 | 8_3:-3413525 | Msa1270030:CDS |
| AACAATGCTGGTGTTGCTGG+AGG | 0.655043 | 8_3:-3413537 | Msa1270030:CDS |
| TCCAACTATCTACTTCACCC+AGG | 0.666566 | 8_3:-3411965 | Msa1270030:CDS |
| GTTAATGTCTCCTCTAGACG+TGG | 0.686665 | 8_3:-3411939 | Msa1270030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAATAATTTTTTTTT+AGG | + | chr8_3:3413641-3413660 | None:intergenic | 0.0% |
| !!! | TAAAAAAAAATTATTTTTTT+TGG | - | chr8_3:3413640-3413659 | Msa1270030:intron | 0.0% |
| !!! | AAAAAAAATAATTTTTTTTT+AGG | + | chr8_3:3413641-3413660 | None:intergenic | 0.0% |
| !!! | TAAAAAAAAATTATTTTTTT+TGG | - | chr8_3:3413640-3413659 | Msa1270030:intron | 0.0% |
| !! | ATATATATGTGAAGAAAAAA+AGG | + | chr8_3:3411927-3411946 | None:intergenic | 15.0% |
| !!! | ATTAAGTTTATTTACACTTT+TGG | - | chr8_3:3412311-3412330 | Msa1270030:intron | 15.0% |
| !!! | TACAACTTGTTAAAAAAAAT+AGG | + | chr8_3:3413106-3413125 | None:intergenic | 15.0% |
| !!! | AAATTTTCAAAAGCATATAT+AGG | - | chr8_3:3413143-3413162 | Msa1270030:intron | 15.0% |
| !!! | TTTTTTTTTTATAGAACACA+AGG | - | chr8_3:3413218-3413237 | Msa1270030:intron | 15.0% |
| !! | ATATATATGTGAAGAAAAAA+AGG | + | chr8_3:3411927-3411946 | None:intergenic | 15.0% |
| !!! | ATTAAGTTTATTTACACTTT+TGG | - | chr8_3:3412311-3412330 | Msa1270030:intron | 15.0% |
| !!! | TACAACTTGTTAAAAAAAAT+AGG | + | chr8_3:3413106-3413125 | None:intergenic | 15.0% |
| !!! | AAATTTTCAAAAGCATATAT+AGG | - | chr8_3:3413143-3413162 | Msa1270030:intron | 15.0% |
| !!! | TTTTTTTTTTATAGAACACA+AGG | - | chr8_3:3413218-3413237 | Msa1270030:intron | 15.0% |
| !! | AGTTAATAAGAAGGAAAAAT+CGG | + | chr8_3:3412282-3412301 | None:intergenic | 20.0% |
| !!! | TCTTGTATGTTGTATTTTTT+TGG | - | chr8_3:3412627-3412646 | Msa1270030:intron | 20.0% |
| !!! | AAGTGATTTTGATTTTAACT+AGG | - | chr8_3:3413392-3413411 | Msa1270030:intron | 20.0% |
| !! | ATCGTAAGATAAATATAGTT+TGG | + | chr8_3:3413507-3413526 | None:intergenic | 20.0% |
| !! | AAAGACAAAAAATGATTACA+TGG | - | chr8_3:3413760-3413779 | Msa1270030:CDS | 20.0% |
| !! | AGTTAATAAGAAGGAAAAAT+CGG | + | chr8_3:3412282-3412301 | None:intergenic | 20.0% |
| !!! | TCTTGTATGTTGTATTTTTT+TGG | - | chr8_3:3412627-3412646 | Msa1270030:intron | 20.0% |
| !!! | AAGTGATTTTGATTTTAACT+AGG | - | chr8_3:3413392-3413411 | Msa1270030:intron | 20.0% |
| !! | ATCGTAAGATAAATATAGTT+TGG | + | chr8_3:3413507-3413526 | None:intergenic | 20.0% |
| !! | AAAGACAAAAAATGATTACA+TGG | - | chr8_3:3413760-3413779 | Msa1270030:CDS | 20.0% |
| ! | CAACAAGTTTGATCATAATT+AGG | - | chr8_3:3411955-3411974 | Msa1270030:CDS | 25.0% |
| ! | AGTTCATCAAAATCCAATTT+GGG | - | chr8_3:3412221-3412240 | Msa1270030:intron | 25.0% |
| ! | TGACAAACAAGTTAATAAGA+AGG | + | chr8_3:3412291-3412310 | None:intergenic | 25.0% |
| !!! | ATTTACACTTTTGGAATCAT+TGG | - | chr8_3:3412320-3412339 | Msa1270030:intron | 25.0% |
| ! | ATATAAAAGATGACTAGAGA+TGG | + | chr8_3:3412605-3412624 | None:intergenic | 25.0% |
| !!! | TTTAAGTTTCGAGTTTGTTT+CGG | - | chr8_3:3412730-3412749 | Msa1270030:intron | 25.0% |
| !! | ACATAAAAACTTTGGCTTAA+CGG | + | chr8_3:3412777-3412796 | None:intergenic | 25.0% |
| ! | GATATATCAGCTTTACTTAA+CGG | + | chr8_3:3412800-3412819 | None:intergenic | 25.0% |
| !!! | ACAAATCAATTTTGGCTTAA+CGG | - | chr8_3:3412897-3412916 | Msa1270030:intron | 25.0% |
| !!! | TTTAAGTTTCGAGTTTGTTT+CGG | + | chr8_3:3412730-3412749 | None:intergenic | 25.0% |
| !! | TCTGAAACTTAGAAACTTAA+AGG | - | chr8_3:3413031-3413050 | Msa1270030:intron | 25.0% |
| ! | GAAACAAACATGAAACTTAA+AGG | - | chr8_3:3413062-3413081 | Msa1270030:intron | 25.0% |
| !! | AATTGTTGAGATTTTCTACA+TGG | + | chr8_3:3413181-3413200 | None:intergenic | 25.0% |
| ! | AAGGTTGTGAATATTCATAA+AGG | - | chr8_3:3413237-3413256 | Msa1270030:intron | 25.0% |
| ! | CATCAAATAATGAATTGTTC+TGG | - | chr8_3:3413443-3413462 | Msa1270030:intron | 25.0% |
| ! | TCACAAATAAAACTTACTTG+CGG | + | chr8_3:3413673-3413692 | None:intergenic | 25.0% |
| !!! | TGGTATTGATTTGATTTTGT+AGG | - | chr8_3:3413780-3413799 | Msa1270030:CDS | 25.0% |
| !!! | TTGATTTGATTTTGTAGGTA+AGG | - | chr8_3:3413785-3413804 | Msa1270030:CDS | 25.0% |
| !!! | TGATTTGATTTTGTAGGTAA+GGG | - | chr8_3:3413786-3413805 | Msa1270030:CDS | 25.0% |
| !!! | GTTTATTTCTACACATTCTT+CGG | + | chr8_3:3413860-3413879 | None:intergenic | 25.0% |
| ! | TGTGTAGAAATAAACTTCTT+TGG | - | chr8_3:3413865-3413884 | Msa1270030:CDS | 25.0% |
| ! | CAACAAGTTTGATCATAATT+AGG | - | chr8_3:3411955-3411974 | Msa1270030:CDS | 25.0% |
| ! | AGTTCATCAAAATCCAATTT+GGG | - | chr8_3:3412221-3412240 | Msa1270030:intron | 25.0% |
| ! | TGACAAACAAGTTAATAAGA+AGG | + | chr8_3:3412291-3412310 | None:intergenic | 25.0% |
| !!! | ATTTACACTTTTGGAATCAT+TGG | - | chr8_3:3412320-3412339 | Msa1270030:intron | 25.0% |
| ! | ATATAAAAGATGACTAGAGA+TGG | + | chr8_3:3412605-3412624 | None:intergenic | 25.0% |
| !!! | TTTAAGTTTCGAGTTTGTTT+CGG | - | chr8_3:3412730-3412749 | Msa1270030:intron | 25.0% |
| !! | ACATAAAAACTTTGGCTTAA+CGG | + | chr8_3:3412777-3412796 | None:intergenic | 25.0% |
| ! | GATATATCAGCTTTACTTAA+CGG | + | chr8_3:3412800-3412819 | None:intergenic | 25.0% |
| !!! | ACAAATCAATTTTGGCTTAA+CGG | - | chr8_3:3412897-3412916 | Msa1270030:intron | 25.0% |
| !!! | TTTAAGTTTCGAGTTTGTTT+CGG | + | chr8_3:3412730-3412749 | None:intergenic | 25.0% |
| !! | TCTGAAACTTAGAAACTTAA+AGG | - | chr8_3:3413031-3413050 | Msa1270030:intron | 25.0% |
| ! | GAAACAAACATGAAACTTAA+AGG | - | chr8_3:3413062-3413081 | Msa1270030:intron | 25.0% |
| !! | AATTGTTGAGATTTTCTACA+TGG | + | chr8_3:3413181-3413200 | None:intergenic | 25.0% |
| ! | AAGGTTGTGAATATTCATAA+AGG | - | chr8_3:3413237-3413256 | Msa1270030:intron | 25.0% |
| ! | CATCAAATAATGAATTGTTC+TGG | - | chr8_3:3413443-3413462 | Msa1270030:intron | 25.0% |
| ! | TCACAAATAAAACTTACTTG+CGG | + | chr8_3:3413673-3413692 | None:intergenic | 25.0% |
| !!! | TGGTATTGATTTGATTTTGT+AGG | - | chr8_3:3413780-3413799 | Msa1270030:CDS | 25.0% |
| !!! | TTGATTTGATTTTGTAGGTA+AGG | - | chr8_3:3413785-3413804 | Msa1270030:CDS | 25.0% |
| !!! | TGATTTGATTTTGTAGGTAA+GGG | - | chr8_3:3413786-3413805 | Msa1270030:CDS | 25.0% |
| !!! | GTTTATTTCTACACATTCTT+CGG | + | chr8_3:3413860-3413879 | None:intergenic | 25.0% |
| ! | TGTGTAGAAATAAACTTCTT+TGG | - | chr8_3:3413865-3413884 | Msa1270030:CDS | 25.0% |
| AGAAAAAAAGGCAAAGGAAA+AGG | + | chr8_3:3411915-3411934 | None:intergenic | 30.0% | |
| ATGTGAAGAAAAAAAGGCAA+AGG | + | chr8_3:3411921-3411940 | None:intergenic | 30.0% | |
| ! | ACCTTGTTAATCTTGTTTCT+AGG | - | chr8_3:3411990-3412009 | Msa1270030:CDS | 30.0% |
| ACCTAGAAACAAGATTAACA+AGG | + | chr8_3:3411994-3412013 | None:intergenic | 30.0% | |
| CTAATAAGGGAATTGGTTAT+GGG | - | chr8_3:3412032-3412051 | Msa1270030:CDS | 30.0% | |
| TTATGGGATATGCAAGAAAT+TGG | - | chr8_3:3412048-3412067 | Msa1270030:CDS | 30.0% | |
| GTAGAAAGTTTGAAAGAGTT+AGG | - | chr8_3:3412130-3412149 | Msa1270030:intron | 30.0% | |
| CTAAAGAAGAAACACTTGTA+GGG | + | chr8_3:3412198-3412217 | None:intergenic | 30.0% | |
| ACTAAAGAAGAAACACTTGT+AGG | + | chr8_3:3412199-3412218 | None:intergenic | 30.0% | |
| GAGTTCATCAAAATCCAATT+TGG | - | chr8_3:3412220-3412239 | Msa1270030:intron | 30.0% | |
| TGGAGAGAATGTTGTTAAAA+AGG | - | chr8_3:3412383-3412402 | Msa1270030:intron | 30.0% | |
| GAAACAAACGTGAAACTTAA+AGG | + | chr8_3:3412671-3412690 | None:intergenic | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr8_3:3412693-3412712 | Msa1270030:intron | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | + | chr8_3:3412972-3412991 | None:intergenic | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr8_3:3412704-3412723 | Msa1270030:intron | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | + | chr8_3:3412943-3412962 | None:intergenic | 30.0% | |
| ! | CTTAACGGACATAAAAACTT+TGG | + | chr8_3:3412785-3412804 | None:intergenic | 30.0% |
| !! | CTTAACGGACAAATCAATTT+TGG | - | chr8_3:3412889-3412908 | Msa1270030:intron | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | - | chr8_3:3412943-3412962 | Msa1270030:intron | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | + | chr8_3:3412704-3412723 | None:intergenic | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | - | chr8_3:3412972-3412991 | Msa1270030:intron | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | + | chr8_3:3412693-3412712 | None:intergenic | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | - | chr8_3:3412943-3412962 | Msa1270030:intron | 30.0% | |
| ! | CAAAAGCATATATAGGTTGT+TGG | - | chr8_3:3413150-3413169 | Msa1270030:intron | 30.0% |
| TTAACTAGGTTATTAAGCTC+AGG | - | chr8_3:3413406-3413425 | Msa1270030:intron | 30.0% | |
| TTCCACCTAAAAATTGAACT+CGG | + | chr8_3:3413474-3413493 | None:intergenic | 30.0% | |
| TATGTTAACTTTCCGATTCT+CGG | + | chr8_3:3413558-3413577 | None:intergenic | 30.0% | |
| CAAATTAATCTTCAGATTGC+AGG | + | chr8_3:3413737-3413756 | None:intergenic | 30.0% | |
| CTGCAATCTGAAGATTAATT+TGG | - | chr8_3:3413735-3413754 | Msa1270030:CDS | 30.0% | |
| !! | GATTTGATTTTGTAGGTAAG+GGG | - | chr8_3:3413787-3413806 | Msa1270030:CDS | 30.0% |
| AGAAAAAAAGGCAAAGGAAA+AGG | + | chr8_3:3411915-3411934 | None:intergenic | 30.0% | |
| ATGTGAAGAAAAAAAGGCAA+AGG | + | chr8_3:3411921-3411940 | None:intergenic | 30.0% | |
| ! | ACCTTGTTAATCTTGTTTCT+AGG | - | chr8_3:3411990-3412009 | Msa1270030:CDS | 30.0% |
| ACCTAGAAACAAGATTAACA+AGG | + | chr8_3:3411994-3412013 | None:intergenic | 30.0% | |
| CTAATAAGGGAATTGGTTAT+GGG | - | chr8_3:3412032-3412051 | Msa1270030:CDS | 30.0% | |
| TTATGGGATATGCAAGAAAT+TGG | - | chr8_3:3412048-3412067 | Msa1270030:CDS | 30.0% | |
| GTAGAAAGTTTGAAAGAGTT+AGG | - | chr8_3:3412130-3412149 | Msa1270030:intron | 30.0% | |
| CTAAAGAAGAAACACTTGTA+GGG | + | chr8_3:3412198-3412217 | None:intergenic | 30.0% | |
| ACTAAAGAAGAAACACTTGT+AGG | + | chr8_3:3412199-3412218 | None:intergenic | 30.0% | |
| GAGTTCATCAAAATCCAATT+TGG | - | chr8_3:3412220-3412239 | Msa1270030:intron | 30.0% | |
| TGGAGAGAATGTTGTTAAAA+AGG | - | chr8_3:3412383-3412402 | Msa1270030:intron | 30.0% | |
| GAAACAAACGTGAAACTTAA+AGG | + | chr8_3:3412671-3412690 | None:intergenic | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr8_3:3412693-3412712 | Msa1270030:intron | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | + | chr8_3:3412972-3412991 | None:intergenic | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr8_3:3412704-3412723 | Msa1270030:intron | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | + | chr8_3:3412943-3412962 | None:intergenic | 30.0% | |
| ! | CTTAACGGACATAAAAACTT+TGG | + | chr8_3:3412785-3412804 | None:intergenic | 30.0% |
| !! | CTTAACGGACAAATCAATTT+TGG | - | chr8_3:3412889-3412908 | Msa1270030:intron | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | - | chr8_3:3412943-3412962 | Msa1270030:intron | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | + | chr8_3:3412704-3412723 | None:intergenic | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | - | chr8_3:3412972-3412991 | Msa1270030:intron | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | + | chr8_3:3412693-3412712 | None:intergenic | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | - | chr8_3:3412943-3412962 | Msa1270030:intron | 30.0% | |
| ! | CAAAAGCATATATAGGTTGT+TGG | - | chr8_3:3413150-3413169 | Msa1270030:intron | 30.0% |
| TTAACTAGGTTATTAAGCTC+AGG | - | chr8_3:3413406-3413425 | Msa1270030:intron | 30.0% | |
| TTCCACCTAAAAATTGAACT+CGG | + | chr8_3:3413474-3413493 | None:intergenic | 30.0% | |
| TATGTTAACTTTCCGATTCT+CGG | + | chr8_3:3413558-3413577 | None:intergenic | 30.0% | |
| CAAATTAATCTTCAGATTGC+AGG | + | chr8_3:3413737-3413756 | None:intergenic | 30.0% | |
| CTGCAATCTGAAGATTAATT+TGG | - | chr8_3:3413735-3413754 | Msa1270030:CDS | 30.0% | |
| !! | GATTTGATTTTGTAGGTAAG+GGG | - | chr8_3:3413787-3413806 | Msa1270030:CDS | 30.0% |
| ACTTGTAACAGGAGCTAATA+AGG | - | chr8_3:3412018-3412037 | Msa1270030:CDS | 35.0% | |
| CTTGTAACAGGAGCTAATAA+GGG | - | chr8_3:3412019-3412038 | Msa1270030:CDS | 35.0% | |
| GCTAATAAGGGAATTGGTTA+TGG | - | chr8_3:3412031-3412050 | Msa1270030:CDS | 35.0% | |
| ACTGCTAGAAATGAGAAAAG+AGG | - | chr8_3:3412097-3412116 | Msa1270030:intron | 35.0% | |
| AGATATCAAGCTTCCCAAAT+TGG | + | chr8_3:3412237-3412256 | None:intergenic | 35.0% | |
| ATTTGGGAAGCTTGATATCT+TGG | - | chr8_3:3412237-3412256 | Msa1270030:intron | 35.0% | |
| !!! | ACTTTTGGAATCATTGGTGT+AGG | - | chr8_3:3412326-3412345 | Msa1270030:intron | 35.0% |
| !! | AAGCATCGTTTAGTCTTGAT+CGG | - | chr8_3:3412466-3412485 | Msa1270030:intron | 35.0% |
| GTTATCAAATCCAACCAAGA+TGG | - | chr8_3:3412553-3412572 | Msa1270030:intron | 35.0% | |
| GTTTCACGTTTGTTTCAGAT+AGG | - | chr8_3:3412675-3412694 | Msa1270030:intron | 35.0% | |
| ! | TAAAAACTTTGGCTTAACGG+AGG | + | chr8_3:3412774-3412793 | None:intergenic | 35.0% |
| AAGCTGATATATCCGTTAAG+TGG | - | chr8_3:3412807-3412826 | Msa1270030:intron | 35.0% | |
| AGCTGATATATCCGTTAAGT+GGG | - | chr8_3:3412808-3412827 | Msa1270030:intron | 35.0% | |
| !! | GTTTCGAGTTTGTTTCAGAT+AGG | + | chr8_3:3412939-3412958 | None:intergenic | 35.0% |
| AACATGAAACTTAAAGGACC+TGG | - | chr8_3:3413068-3413087 | Msa1270030:intron | 35.0% | |
| ACATGAAACTTAAAGGACCT+GGG | - | chr8_3:3413069-3413088 | Msa1270030:intron | 35.0% | |
| AAGCATATATAGGTTGTTGG+AGG | - | chr8_3:3413153-3413172 | Msa1270030:intron | 35.0% | |
| TAGTCAAGAATGAGTAGTCA+GGG | - | chr8_3:3413320-3413339 | Msa1270030:intron | 35.0% | |
| ! | AGATCCCGAGTTCAATTTTT+AGG | - | chr8_3:3413466-3413485 | Msa1270030:intron | 35.0% |
| TCCACCTAAAAATTGAACTC+GGG | + | chr8_3:3413473-3413492 | None:intergenic | 35.0% | |
| ATGTTAACTTTCCGATTCTC+GGG | + | chr8_3:3413557-3413576 | None:intergenic | 35.0% | |
| TAAGGGGTGAAATATCTGAT+TGG | - | chr8_3:3413803-3413822 | Msa1270030:CDS | 35.0% | |
| ACTTGTAACAGGAGCTAATA+AGG | - | chr8_3:3412018-3412037 | Msa1270030:CDS | 35.0% | |
| CTTGTAACAGGAGCTAATAA+GGG | - | chr8_3:3412019-3412038 | Msa1270030:CDS | 35.0% | |
| GCTAATAAGGGAATTGGTTA+TGG | - | chr8_3:3412031-3412050 | Msa1270030:CDS | 35.0% | |
| ACTGCTAGAAATGAGAAAAG+AGG | - | chr8_3:3412097-3412116 | Msa1270030:intron | 35.0% | |
| AGATATCAAGCTTCCCAAAT+TGG | + | chr8_3:3412237-3412256 | None:intergenic | 35.0% | |
| ATTTGGGAAGCTTGATATCT+TGG | - | chr8_3:3412237-3412256 | Msa1270030:intron | 35.0% | |
| !!! | ACTTTTGGAATCATTGGTGT+AGG | - | chr8_3:3412326-3412345 | Msa1270030:intron | 35.0% |
| !! | AAGCATCGTTTAGTCTTGAT+CGG | - | chr8_3:3412466-3412485 | Msa1270030:intron | 35.0% |
| GTTATCAAATCCAACCAAGA+TGG | - | chr8_3:3412553-3412572 | Msa1270030:intron | 35.0% | |
| GTTTCACGTTTGTTTCAGAT+AGG | - | chr8_3:3412675-3412694 | Msa1270030:intron | 35.0% | |
| ! | TAAAAACTTTGGCTTAACGG+AGG | + | chr8_3:3412774-3412793 | None:intergenic | 35.0% |
| AAGCTGATATATCCGTTAAG+TGG | - | chr8_3:3412807-3412826 | Msa1270030:intron | 35.0% | |
| AGCTGATATATCCGTTAAGT+GGG | - | chr8_3:3412808-3412827 | Msa1270030:intron | 35.0% | |
| !! | GTTTCGAGTTTGTTTCAGAT+AGG | + | chr8_3:3412939-3412958 | None:intergenic | 35.0% |
| AACATGAAACTTAAAGGACC+TGG | - | chr8_3:3413068-3413087 | Msa1270030:intron | 35.0% | |
| ACATGAAACTTAAAGGACCT+GGG | - | chr8_3:3413069-3413088 | Msa1270030:intron | 35.0% | |
| AAGCATATATAGGTTGTTGG+AGG | - | chr8_3:3413153-3413172 | Msa1270030:intron | 35.0% | |
| TAGTCAAGAATGAGTAGTCA+GGG | - | chr8_3:3413320-3413339 | Msa1270030:intron | 35.0% | |
| ! | AGATCCCGAGTTCAATTTTT+AGG | - | chr8_3:3413466-3413485 | Msa1270030:intron | 35.0% |
| TCCACCTAAAAATTGAACTC+GGG | + | chr8_3:3413473-3413492 | None:intergenic | 35.0% | |
| ATGTTAACTTTCCGATTCTC+GGG | + | chr8_3:3413557-3413576 | None:intergenic | 35.0% | |
| TAAGGGGTGAAATATCTGAT+TGG | - | chr8_3:3413803-3413822 | Msa1270030:CDS | 35.0% | |
| TCTAGGTATGCACTTGTAAC+AGG | - | chr8_3:3412007-3412026 | Msa1270030:CDS | 40.0% | |
| ACAGGAGCTAATAAGGGAAT+TGG | - | chr8_3:3412025-3412044 | Msa1270030:CDS | 40.0% | |
| ! | TGCAAGAAATTGGCTTCAAG+AGG | - | chr8_3:3412058-3412077 | Msa1270030:CDS | 40.0% |
| !! | ATTGGCTTCAAGAGGTGTTA+TGG | - | chr8_3:3412066-3412085 | Msa1270030:CDS | 40.0% |
| ATGCTGACAACAAGAATGCA+TGG | + | chr8_3:3412444-3412463 | None:intergenic | 40.0% | |
| !! | ATCGTTTAGTCTTGATCGGA+CGG | - | chr8_3:3412470-3412489 | Msa1270030:intron | 40.0% |
| ATATATCCGTTAAGTGGGTG+AGG | - | chr8_3:3412813-3412832 | Msa1270030:intron | 40.0% | |
| ! | TAAGCCAAAGTTGATCTGGT+CGG | + | chr8_3:3412873-3412892 | None:intergenic | 40.0% |
| ! | CCAGATCAACTTTGGCTTAA+CGG | - | chr8_3:3412874-3412893 | Msa1270030:intron | 40.0% |
| !! | GTTTCGAGTTTGTTTCGGAT+AGG | + | chr8_3:3412735-3412754 | None:intergenic | 40.0% |
| CATGAAACTTAAAGGACCTG+GGG | - | chr8_3:3413070-3413089 | Msa1270030:intron | 40.0% | |
| GTAGTCAAGAATGAGTAGTC+AGG | - | chr8_3:3413319-3413338 | Msa1270030:intron | 40.0% | |
| AGTCAAGAATGAGTAGTCAG+GGG | - | chr8_3:3413321-3413340 | Msa1270030:intron | 40.0% | |
| !! | TCCCGAGTTCAATTTTTAGG+TGG | - | chr8_3:3413469-3413488 | Msa1270030:intron | 40.0% |
| !! | CGATCGATTCGAGATTACTA+TGG | - | chr8_3:3413523-3413542 | Msa1270030:CDS | 40.0% |
| GAAGTAGATAGTTGGAGCAA+GGG | + | chr8_3:3413919-3413938 | None:intergenic | 40.0% | |
| TGAAGTAGATAGTTGGAGCA+AGG | + | chr8_3:3413920-3413939 | None:intergenic | 40.0% | |
| GAGGAGACATTAACAATCCT+GGG | + | chr8_3:3413943-3413962 | None:intergenic | 40.0% | |
| AGAGGAGACATTAACAATCC+TGG | + | chr8_3:3413944-3413963 | None:intergenic | 40.0% | |
| TCTAGGTATGCACTTGTAAC+AGG | - | chr8_3:3412007-3412026 | Msa1270030:CDS | 40.0% | |
| ACAGGAGCTAATAAGGGAAT+TGG | - | chr8_3:3412025-3412044 | Msa1270030:CDS | 40.0% | |
| ! | TGCAAGAAATTGGCTTCAAG+AGG | - | chr8_3:3412058-3412077 | Msa1270030:CDS | 40.0% |
| !! | ATTGGCTTCAAGAGGTGTTA+TGG | - | chr8_3:3412066-3412085 | Msa1270030:CDS | 40.0% |
| ATGCTGACAACAAGAATGCA+TGG | + | chr8_3:3412444-3412463 | None:intergenic | 40.0% | |
| !! | ATCGTTTAGTCTTGATCGGA+CGG | - | chr8_3:3412470-3412489 | Msa1270030:intron | 40.0% |
| ATATATCCGTTAAGTGGGTG+AGG | - | chr8_3:3412813-3412832 | Msa1270030:intron | 40.0% | |
| ! | TAAGCCAAAGTTGATCTGGT+CGG | + | chr8_3:3412873-3412892 | None:intergenic | 40.0% |
| ! | CCAGATCAACTTTGGCTTAA+CGG | - | chr8_3:3412874-3412893 | Msa1270030:intron | 40.0% |
| !! | GTTTCGAGTTTGTTTCGGAT+AGG | + | chr8_3:3412735-3412754 | None:intergenic | 40.0% |
| CATGAAACTTAAAGGACCTG+GGG | - | chr8_3:3413070-3413089 | Msa1270030:intron | 40.0% | |
| GTAGTCAAGAATGAGTAGTC+AGG | - | chr8_3:3413319-3413338 | Msa1270030:intron | 40.0% | |
| AGTCAAGAATGAGTAGTCAG+GGG | - | chr8_3:3413321-3413340 | Msa1270030:intron | 40.0% | |
| !! | TCCCGAGTTCAATTTTTAGG+TGG | - | chr8_3:3413469-3413488 | Msa1270030:intron | 40.0% |
| !! | CGATCGATTCGAGATTACTA+TGG | - | chr8_3:3413523-3413542 | Msa1270030:CDS | 40.0% |
| GAAGTAGATAGTTGGAGCAA+GGG | + | chr8_3:3413919-3413938 | None:intergenic | 40.0% | |
| TGAAGTAGATAGTTGGAGCA+AGG | + | chr8_3:3413920-3413939 | None:intergenic | 40.0% | |
| GAGGAGACATTAACAATCCT+GGG | + | chr8_3:3413943-3413962 | None:intergenic | 40.0% | |
| AGAGGAGACATTAACAATCC+TGG | + | chr8_3:3413944-3413963 | None:intergenic | 40.0% | |
| TGGGAAGCTTGATATCTTGG+TGG | - | chr8_3:3412240-3412259 | Msa1270030:intron | 45.0% | |
| GGGAAGCTTGATATCTTGGT+GGG | - | chr8_3:3412241-3412260 | Msa1270030:intron | 45.0% | |
| TTGGTGTAGGTGAACAATGC+TGG | - | chr8_3:3412339-3412358 | Msa1270030:intron | 45.0% | |
| GTTGCTGGAGGAATAGTGAA+TGG | - | chr8_3:3412363-3412382 | Msa1270030:intron | 45.0% | |
| ! | AGATGACTTGCACACCATCT+TGG | + | chr8_3:3412570-3412589 | None:intergenic | 45.0% |
| !! | TTTTTGGCCAAATACCTCGC+TGG | - | chr8_3:3412643-3412662 | Msa1270030:intron | 45.0% |
| ! | AAAGGATCCAGCGAGGTATT+TGG | + | chr8_3:3412653-3412672 | None:intergenic | 45.0% |
| GAAACTTAAAGGATCCAGCG+AGG | + | chr8_3:3412660-3412679 | None:intergenic | 45.0% | |
| CTTAACGGAGGTTGACAGAA+AGG | + | chr8_3:3412762-3412781 | None:intergenic | 45.0% | |
| ! | AAGCCAAAGTTGATCTGGTC+GGG | + | chr8_3:3412872-3412891 | None:intergenic | 45.0% |
| ! | CCGTTAAGCCAAAGTTGATC+TGG | + | chr8_3:3412877-3412896 | None:intergenic | 45.0% |
| AATAGGTCAAATACCTCCCC+AGG | + | chr8_3:3413089-3413108 | None:intergenic | 45.0% | |
| TGGTCATCTTTCCCGAGAAT+CGG | - | chr8_3:3413543-3413562 | Msa1270030:CDS | 45.0% | |
| TCCAACTATCTACTTCACCC+AGG | - | chr8_3:3413923-3413942 | Msa1270030:intron | 45.0% | |
| TCCTGGGTGAAGTAGATAGT+TGG | + | chr8_3:3413927-3413946 | None:intergenic | 45.0% | |
| GTTAATGTCTCCTCTAGACG+TGG | - | chr8_3:3413949-3413968 | Msa1270030:intron | 45.0% | |
| CTTGAATTGTCCACGTCTAG+AGG | + | chr8_3:3413962-3413981 | None:intergenic | 45.0% | |
| CTCTAGACGTGGACAATTCA+AGG | - | chr8_3:3413960-3413979 | Msa1270030:intron | 45.0% | |
| TGGGAAGCTTGATATCTTGG+TGG | - | chr8_3:3412240-3412259 | Msa1270030:intron | 45.0% | |
| GGGAAGCTTGATATCTTGGT+GGG | - | chr8_3:3412241-3412260 | Msa1270030:intron | 45.0% | |
| TTGGTGTAGGTGAACAATGC+TGG | - | chr8_3:3412339-3412358 | Msa1270030:intron | 45.0% | |
| GTTGCTGGAGGAATAGTGAA+TGG | - | chr8_3:3412363-3412382 | Msa1270030:intron | 45.0% | |
| ! | AGATGACTTGCACACCATCT+TGG | + | chr8_3:3412570-3412589 | None:intergenic | 45.0% |
| !! | TTTTTGGCCAAATACCTCGC+TGG | - | chr8_3:3412643-3412662 | Msa1270030:intron | 45.0% |
| ! | AAAGGATCCAGCGAGGTATT+TGG | + | chr8_3:3412653-3412672 | None:intergenic | 45.0% |
| GAAACTTAAAGGATCCAGCG+AGG | + | chr8_3:3412660-3412679 | None:intergenic | 45.0% | |
| CTTAACGGAGGTTGACAGAA+AGG | + | chr8_3:3412762-3412781 | None:intergenic | 45.0% | |
| ! | AAGCCAAAGTTGATCTGGTC+GGG | + | chr8_3:3412872-3412891 | None:intergenic | 45.0% |
| ! | CCGTTAAGCCAAAGTTGATC+TGG | + | chr8_3:3412877-3412896 | None:intergenic | 45.0% |
| AATAGGTCAAATACCTCCCC+AGG | + | chr8_3:3413089-3413108 | None:intergenic | 45.0% | |
| TGGTCATCTTTCCCGAGAAT+CGG | - | chr8_3:3413543-3413562 | Msa1270030:CDS | 45.0% | |
| TCCAACTATCTACTTCACCC+AGG | - | chr8_3:3413923-3413942 | Msa1270030:intron | 45.0% | |
| TCCTGGGTGAAGTAGATAGT+TGG | + | chr8_3:3413927-3413946 | None:intergenic | 45.0% | |
| GTTAATGTCTCCTCTAGACG+TGG | - | chr8_3:3413949-3413968 | Msa1270030:intron | 45.0% | |
| CTTGAATTGTCCACGTCTAG+AGG | + | chr8_3:3413962-3413981 | None:intergenic | 45.0% | |
| CTCTAGACGTGGACAATTCA+AGG | - | chr8_3:3413960-3413979 | Msa1270030:intron | 45.0% | |
| !! | TTTAAATAAATTTAAAAAGT+AGG | - | chr8_3:3412518-3412537 | Msa1270030:intron | 5.0% |
| !!! | AAATGATTTTAAATTTTAAA+TGG | - | chr8_3:3413584-3413603 | Msa1270030:intron | 5.0% |
| !! | TTTAAATAAATTTAAAAAGT+AGG | - | chr8_3:3412518-3412537 | Msa1270030:intron | 5.0% |
| !!! | AAATGATTTTAAATTTTAAA+TGG | - | chr8_3:3413584-3413603 | Msa1270030:intron | 5.0% |
| !! | GTGAACAATGCTGGTGTTGC+TGG | - | chr8_3:3412348-3412367 | Msa1270030:intron | 50.0% |
| !! | AACAATGCTGGTGTTGCTGG+AGG | - | chr8_3:3412351-3412370 | Msa1270030:intron | 50.0% |
| GACTTGCACACCATCTTGGT+TGG | + | chr8_3:3412566-3412585 | None:intergenic | 50.0% | |
| TATCCGTTAAGTGGGTGAGG+TGG | - | chr8_3:3412816-3412835 | Msa1270030:intron | 50.0% | |
| GAACCACCTCACCCACTTAA+CGG | + | chr8_3:3412822-3412841 | None:intergenic | 50.0% | |
| AGGTGGTTCTCTCTGACACT+TGG | - | chr8_3:3412833-3412852 | Msa1270030:intron | 50.0% | |
| TTCCCCGACCAGATCAACTT+TGG | - | chr8_3:3412866-3412885 | Msa1270030:intron | 50.0% | |
| ! | AGCCAAAGTTGATCTGGTCG+GGG | + | chr8_3:3412871-3412890 | None:intergenic | 50.0% |
| GAAACTTAAAGGACCTGGGG+AGG | - | chr8_3:3413073-3413092 | Msa1270030:intron | 50.0% | |
| !! | GTGAACAATGCTGGTGTTGC+TGG | - | chr8_3:3412348-3412367 | Msa1270030:intron | 50.0% |
| !! | AACAATGCTGGTGTTGCTGG+AGG | - | chr8_3:3412351-3412370 | Msa1270030:intron | 50.0% |
| GACTTGCACACCATCTTGGT+TGG | + | chr8_3:3412566-3412585 | None:intergenic | 50.0% | |
| TATCCGTTAAGTGGGTGAGG+TGG | - | chr8_3:3412816-3412835 | Msa1270030:intron | 50.0% | |
| GAACCACCTCACCCACTTAA+CGG | + | chr8_3:3412822-3412841 | None:intergenic | 50.0% | |
| AGGTGGTTCTCTCTGACACT+TGG | - | chr8_3:3412833-3412852 | Msa1270030:intron | 50.0% | |
| TTCCCCGACCAGATCAACTT+TGG | - | chr8_3:3412866-3412885 | Msa1270030:intron | 50.0% | |
| ! | AGCCAAAGTTGATCTGGTCG+GGG | + | chr8_3:3412871-3412890 | None:intergenic | 50.0% |
| GAAACTTAAAGGACCTGGGG+AGG | - | chr8_3:3413073-3413092 | Msa1270030:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 3411884 | 3414026 | 3411884 | ID=Msa1270030;Name=Msa1270030 |
| chr8_3 | mRNA | 3411884 | 3414026 | 3411884 | ID=Msa1270030-mRNA-1;Parent=Msa1270030;Name=Msa1270030-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|4|0|182 |
| chr8_3 | exon | 3414007 | 3414026 | 3414007 | ID=Msa1270030-mRNA-1:exon:1107;Parent=Msa1270030-mRNA-1 |
| chr8_3 | exon | 3413652 | 3413898 | 3413652 | ID=Msa1270030-mRNA-1:exon:1106;Parent=Msa1270030-mRNA-1 |
| chr8_3 | exon | 3413506 | 3413562 | 3413506 | ID=Msa1270030-mRNA-1:exon:1105;Parent=Msa1270030-mRNA-1 |
| chr8_3 | exon | 3411884 | 3412108 | 3411884 | ID=Msa1270030-mRNA-1:exon:1104;Parent=Msa1270030-mRNA-1 |
| chr8_3 | CDS | 3414007 | 3414026 | 3414007 | ID=Msa1270030-mRNA-1:cds;Parent=Msa1270030-mRNA-1 |
| chr8_3 | CDS | 3413652 | 3413898 | 3413652 | ID=Msa1270030-mRNA-1:cds;Parent=Msa1270030-mRNA-1 |
| chr8_3 | CDS | 3413506 | 3413562 | 3413506 | ID=Msa1270030-mRNA-1:cds;Parent=Msa1270030-mRNA-1 |
| chr8_3 | CDS | 3411884 | 3412108 | 3411884 | ID=Msa1270030-mRNA-1:cds;Parent=Msa1270030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
