Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481410 | XP_003627593.1 | 97.578 | 289 | 7 | 0 | 1 | 289 | 1 | 289 | 0.0 | 585 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481410 | sp|Q9M2E2|SDR1_ARATH | 55.903 | 288 | 124 | 3 | 1 | 285 | 1 | 288 | 4.06e-112 | 334 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481410 | G7LBT1 | 97.578 | 289 | 7 | 0 | 1 | 289 | 1 | 289 | 0.0 | 585 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0074620 | Msa0481410 | 0.800073 | 1.709837e-48 | -8.615850e-47 |
| Msa0414480 | Msa0481410 | 0.816215 | 6.203151e-52 | -8.615850e-47 |
| Msa0481410 | Msa0543740 | 0.800428 | 1.448265e-48 | -8.615850e-47 |
| Msa0481410 | Msa0867080 | 0.805159 | 1.527355e-49 | -8.615850e-47 |
| Msa0481410 | Msa1061670 | 0.803192 | 3.919252e-49 | -8.615850e-47 |
| Msa0481410 | Msa1064940 | 0.805565 | 1.255363e-49 | -8.615850e-47 |
| Msa0481410 | Msa1106960 | 0.800969 | 1.123270e-48 | -8.615850e-47 |
| Msa0481410 | Msa1123010 | 0.802401 | 5.709703e-49 | -8.615850e-47 |
| Msa0481410 | Msa1238440 | 0.826143 | 3.189166e-54 | -8.615850e-47 |
| Msa0481410 | Msa1270010 | 0.819129 | 1.366023e-52 | -8.615850e-47 |
| Msa0481410 | Msa1270030 | 0.807980 | 3.876586e-50 | -8.615850e-47 |
| Msa0481410 | Msa1387480 | 0.808597 | 2.864478e-50 | -8.615850e-47 |
| Msa0481410 | Msa1441450 | 0.817650 | 2.953371e-52 | -8.615850e-47 |
| Msa0481410 | Msa1459610 | 0.800115 | 1.676743e-48 | -8.615850e-47 |
| Msa0269240 | Msa0481410 | 0.800149 | 1.649966e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481410 | MtrunA17_Chr8g0349721 | 97.578 | 289 | 7 | 0 | 1 | 289 | 1 | 289 | 0.0 | 585 |
| Msa0481410 | MtrunA17_Chr8g0349701 | 96.540 | 289 | 10 | 0 | 1 | 289 | 1 | 289 | 0.0 | 579 |
| Msa0481410 | MtrunA17_Chr7g0247041 | 67.260 | 281 | 90 | 2 | 7 | 285 | 6 | 286 | 1.65e-130 | 378 |
| Msa0481410 | MtrunA17_Chr8g0349811 | 56.040 | 298 | 126 | 2 | 1 | 293 | 1 | 298 | 2.71e-119 | 350 |
| Msa0481410 | MtrunA17_Chr8g0349801 | 57.095 | 296 | 120 | 3 | 1 | 291 | 1 | 294 | 2.12e-118 | 347 |
| Msa0481410 | MtrunA17_Chr8g0349781 | 55.705 | 298 | 127 | 2 | 1 | 293 | 1 | 298 | 1.07e-117 | 345 |
| Msa0481410 | MtrunA17_Chr8g0349851 | 55.326 | 291 | 124 | 2 | 1 | 285 | 1 | 291 | 1.20e-115 | 340 |
| Msa0481410 | MtrunA17_Chr7g0247011 | 56.655 | 293 | 120 | 3 | 1 | 293 | 1 | 286 | 5.38e-115 | 338 |
| Msa0481410 | MtrunA17_Chr8g0349641 | 55.518 | 299 | 126 | 3 | 1 | 293 | 1 | 298 | 4.45e-112 | 331 |
| Msa0481410 | MtrunA17_Chr8g0349831 | 55.219 | 297 | 127 | 3 | 3 | 293 | 4 | 300 | 1.35e-111 | 330 |
| Msa0481410 | MtrunA17_Chr8g0349671 | 56.376 | 298 | 124 | 4 | 1 | 293 | 1 | 297 | 1.48e-111 | 330 |
| Msa0481410 | MtrunA17_Chr8g0349741 | 55.102 | 294 | 124 | 4 | 1 | 293 | 1 | 287 | 6.05e-108 | 320 |
| Msa0481410 | MtrunA17_Chr8g0349751 | 53.846 | 299 | 132 | 3 | 1 | 293 | 51 | 349 | 2.21e-107 | 321 |
| Msa0481410 | MtrunA17_Chr8g0349771 | 52.685 | 298 | 136 | 2 | 1 | 293 | 1 | 298 | 2.66e-107 | 319 |
| Msa0481410 | MtrunA17_Chr8g0349761 | 54.167 | 288 | 127 | 2 | 7 | 289 | 8 | 295 | 9.18e-107 | 318 |
| Msa0481410 | MtrunA17_Chr7g0247031 | 55.017 | 289 | 120 | 5 | 7 | 293 | 8 | 288 | 1.40e-105 | 314 |
| Msa0481410 | MtrunA17_Chr5g0425391 | 53.378 | 296 | 134 | 2 | 1 | 293 | 1 | 295 | 2.40e-103 | 309 |
| Msa0481410 | MtrunA17_Chr8g0349651 | 51.493 | 268 | 123 | 4 | 31 | 293 | 10 | 275 | 7.09e-87 | 266 |
| Msa0481410 | MtrunA17_Chr3g0118511 | 49.135 | 289 | 136 | 4 | 7 | 285 | 3 | 290 | 1.40e-86 | 266 |
| Msa0481410 | MtrunA17_Chr7g0267881 | 49.138 | 232 | 89 | 2 | 7 | 233 | 9 | 216 | 2.51e-71 | 225 |
| Msa0481410 | MtrunA17_Chr3g0131521 | 37.500 | 288 | 148 | 5 | 9 | 285 | 37 | 303 | 4.95e-60 | 198 |
| Msa0481410 | MtrunA17_Chr1g0160511 | 36.111 | 288 | 152 | 5 | 9 | 285 | 42 | 308 | 1.01e-55 | 187 |
| Msa0481410 | MtrunA17_Chr5g0437701 | 62.903 | 124 | 46 | 0 | 170 | 293 | 5 | 128 | 6.07e-50 | 166 |
| Msa0481410 | MtrunA17_Chr8g0385581 | 32.986 | 288 | 164 | 5 | 9 | 285 | 39 | 308 | 8.98e-48 | 166 |
| Msa0481410 | MtrunA17_Chr4g0045691 | 32.386 | 176 | 103 | 5 | 131 | 293 | 1 | 173 | 1.77e-23 | 97.1 |
| Msa0481410 | MtrunA17_Chr4g0045711 | 48.276 | 87 | 40 | 3 | 9 | 90 | 24 | 110 | 4.42e-14 | 68.6 |
| Msa0481410 | MtrunA17_Chr6g0466681 | 25.256 | 293 | 162 | 11 | 10 | 292 | 70 | 315 | 5.36e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0481410 | AT3G61220.1 | 55.903 | 288 | 124 | 3 | 1 | 285 | 1 | 288 | 4.13e-113 | 334 |
| Msa0481410 | AT3G61220.2 | 56.383 | 282 | 120 | 3 | 7 | 285 | 14 | 295 | 3.44e-111 | 330 |
| Msa0481410 | AT3G61220.3 | 56.383 | 282 | 120 | 3 | 7 | 285 | 38 | 319 | 8.32e-111 | 330 |
| Msa0481410 | AT2G24190.1 | 53.819 | 288 | 130 | 3 | 1 | 285 | 1 | 288 | 1.36e-107 | 320 |
| Msa0481410 | AT2G24190.2 | 53.901 | 282 | 127 | 3 | 7 | 285 | 12 | 293 | 9.67e-106 | 315 |
| Msa0481410 | AT1G01800.1 | 53.846 | 286 | 128 | 3 | 4 | 285 | 2 | 287 | 3.57e-103 | 309 |
| Msa0481410 | AT1G01800.2 | 52.020 | 198 | 93 | 1 | 90 | 285 | 55 | 252 | 1.66e-66 | 213 |
| Msa0481410 | AT5G51030.1 | 35.616 | 292 | 156 | 5 | 5 | 285 | 36 | 306 | 9.18e-57 | 190 |
| Msa0481410 | AT3G59710.3 | 36.986 | 292 | 159 | 7 | 9 | 296 | 21 | 291 | 2.90e-53 | 180 |
| Msa0481410 | AT3G59710.1 | 36.986 | 292 | 159 | 7 | 9 | 296 | 31 | 301 | 1.11e-52 | 179 |
| Msa0481410 | AT3G59710.2 | 36.986 | 292 | 159 | 7 | 9 | 296 | 50 | 320 | 1.17e-52 | 179 |
| Msa0481410 | AT5G61830.1 | 38.144 | 291 | 145 | 7 | 9 | 285 | 39 | 308 | 2.73e-50 | 173 |
| Msa0481410 | AT5G61830.2 | 38.144 | 291 | 145 | 7 | 9 | 285 | 39 | 308 | 2.73e-50 | 173 |
| Msa0481410 | AT5G50700.1 | 32.692 | 156 | 86 | 4 | 7 | 162 | 48 | 184 | 5.15e-12 | 67.4 |
| Msa0481410 | AT5G50600.1 | 32.692 | 156 | 86 | 4 | 7 | 162 | 48 | 184 | 5.15e-12 | 67.4 |
Find 80 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGAAGAATTTCGTTTC+TGG | 0.175614 | 3_3:-87496882 | None:intergenic |
| AATTGGCCAACATTTGTTTC+TGG | 0.189389 | 3_3:+87493389 | Msa0481410:CDS |
| CGGTTTACCTGCTAGAATTT+TGG | 0.197159 | 3_3:-87497294 | None:intergenic |
| TGCAACCTGACACCTGTATC+TGG | 0.222244 | 3_3:-87496743 | None:intergenic |
| GAGTTCATCAAAATCCAATT+TGG | 0.251329 | 3_3:+87491285 | Msa0481410:CDS |
| TTATGGGATATGCAAGAAAT+TGG | 0.259442 | 3_3:+87491113 | Msa0481410:CDS |
| AGATATCAAGCTTCCCAAAT+TGG | 0.260041 | 3_3:-87491299 | None:intergenic |
| TGGAGAGAATGTTGTTAAAA+AGG | 0.269327 | 3_3:+87491448 | Msa0481410:CDS |
| ACTTGTAACAGGAGCTAATA+AGG | 0.275992 | 3_3:+87491083 | Msa0481410:CDS |
| TATATTCGAAGTTCGAATTC+AGG | 0.277856 | 3_3:+87497209 | Msa0481410:CDS |
| TTGCCAGATGATGGCCCTTC+TGG | 0.284677 | 3_3:+87493584 | Msa0481410:CDS |
| TGTGTAGAAATAAACTTCTT+TGG | 0.305048 | 3_3:+87492929 | Msa0481410:CDS |
| AATTGAGCTTGAATGGAGTT+AGG | 0.305744 | 3_3:-87496936 | None:intergenic |
| GCTAATAAGGGAATTGGTTA+TGG | 0.306274 | 3_3:+87491096 | Msa0481410:CDS |
| GTGAACAATGCTGGTGTTGC+TGG | 0.318704 | 3_3:+87491413 | Msa0481410:CDS |
| TCTAGGTATGCACTTGTAAC+AGG | 0.329038 | 3_3:+87491072 | Msa0481410:intron |
| TATTCCTCAAAATTGCAAAA+AGG | 0.347759 | 3_3:+87496679 | Msa0481410:CDS |
| ATTTGGGAAGCTTGATATCT+TGG | 0.349168 | 3_3:+87491302 | Msa0481410:CDS |
| GGGCTTGTTTGGCTCGGCCT+TGG | 0.351290 | 3_3:-87496722 | None:intergenic |
| CACCTGTATCTGGGCTTGTT+TGG | 0.353853 | 3_3:-87496733 | None:intergenic |
| ACTCCTCTTGCCCATTCATT+TGG | 0.361116 | 3_3:-87493272 | None:intergenic |
| TTCAGTTTATGCCAAATGAA+TGG | 0.377340 | 3_3:+87493261 | Msa0481410:intron |
| ATTGGCTTCAAGAGGTGTTA+TGG | 0.387557 | 3_3:+87491131 | Msa0481410:CDS |
| GTAGAAAGTTTGAAAGAGTT+AGG | 0.388081 | 3_3:+87491195 | Msa0481410:CDS |
| ATATCAGTCTTAACAAAGTC+AGG | 0.388627 | 3_3:-87493497 | None:intergenic |
| CAATGACAGAAGCATCAAAA+AGG | 0.391122 | 3_3:+87490947 | None:intergenic |
| AGTTCATCAAAATCCAATTT+GGG | 0.398379 | 3_3:+87491286 | Msa0481410:CDS |
| TGGTATCTTCTTCTTGCCTC+TGG | 0.402772 | 3_3:-87497238 | None:intergenic |
| ACTAAAGAAGAAACACTTGT+AGG | 0.407989 | 3_3:-87491261 | None:intergenic |
| ACAGGAGCTAATAAGGGAAT+TGG | 0.408672 | 3_3:+87491090 | Msa0481410:CDS |
| GTTTATTTCTACACATTCTT+CGG | 0.422875 | 3_3:-87492921 | None:intergenic |
| GAGGACAAAGGTGAGTTTAA+CGG | 0.429835 | 3_3:-87497314 | None:intergenic |
| TGTGAAGAATTGAGCTTGAA+TGG | 0.433333 | 3_3:-87496943 | None:intergenic |
| CTCTAGACGTGGAAAATTCA+AGG | 0.435985 | 3_3:+87493024 | Msa0481410:CDS |
| AGAGGAGACATTAACAATCC+TGG | 0.437672 | 3_3:-87493005 | None:intergenic |
| TGGAGGTTCGAACGAAAGAA+TGG | 0.438265 | 3_3:-87497274 | None:intergenic |
| CAAAATAATACAAGATTATG+AGG | 0.441912 | 3_3:-87497333 | None:intergenic |
| AGACCAGAAGGGCCATCATC+TGG | 0.442885 | 3_3:-87493587 | None:intergenic |
| TCAGTTTATGCCAAATGAAT+GGG | 0.447629 | 3_3:+87493262 | Msa0481410:intron |
| CTAATAAGGGAATTGGTTAT+GGG | 0.448020 | 3_3:+87491097 | Msa0481410:CDS |
| ATTGAGCTTGAATGGAGTTA+GGG | 0.450542 | 3_3:-87496935 | None:intergenic |
| TACAGGTGTCAGGTTGCAAT+TGG | 0.470081 | 3_3:+87496748 | Msa0481410:CDS |
| TGAATGGAGTTAGGGTTCAA+TGG | 0.471973 | 3_3:-87496927 | None:intergenic |
| CTAAAGAAGAAACACTTGTA+GGG | 0.491807 | 3_3:-87491260 | None:intergenic |
| ACGAAAACAATTCAAGATTG+AGG | 0.492016 | 3_3:+87497003 | Msa0481410:CDS |
| TCCAGAAACGAAATTCTTCA+AGG | 0.494411 | 3_3:+87496881 | Msa0481410:CDS |
| CTGATATTAACGAGATGAAA+GGG | 0.496322 | 3_3:+87493513 | Msa0481410:CDS |
| AGAATGGCGAAAAGATGATC+TGG | 0.501593 | 3_3:-87497258 | None:intergenic |
| AGCCAAACAAGCCCAGATAC+AGG | 0.501982 | 3_3:+87496731 | Msa0481410:CDS |
| ACTGCTAGAAATGAGAAAAG+AGG | 0.505341 | 3_3:+87491162 | Msa0481410:CDS |
| TGAAGTAGATAGTTGGAGCA+AGG | 0.513117 | 3_3:-87492981 | None:intergenic |
| TCCTGGGTGAAGTAGATAGT+TGG | 0.520218 | 3_3:-87492988 | None:intergenic |
| TAAGGGGTGAAATATCTGAT+TGG | 0.521800 | 3_3:+87492867 | Msa0481410:CDS |
| GGCAACAATGCTAGATTCAC+AGG | 0.526880 | 3_3:-87493566 | None:intergenic |
| CTAGCATTGTTGCCAGATGA+TGG | 0.529228 | 3_3:+87493575 | Msa0481410:CDS |
| AGATTACAAAGAAGGAGCAT+TGG | 0.531996 | 3_3:+87493358 | Msa0481410:CDS |
| GTATCTGGGCTTGTTTGGCT+CGG | 0.537552 | 3_3:-87496728 | None:intergenic |
| GAGGAGACATTAACAATCCT+GGG | 0.537675 | 3_3:-87493004 | None:intergenic |
| CAAGCCCAGATACAGGTGTC+AGG | 0.540936 | 3_3:+87496738 | Msa0481410:CDS |
| GCAACCTGACACCTGTATCT+GGG | 0.541525 | 3_3:-87496742 | None:intergenic |
| CTTGTAACAGGAGCTAATAA+GGG | 0.542533 | 3_3:+87491084 | Msa0481410:CDS |
| CAGCTTTAAATTCTTACACA+AGG | 0.553733 | 3_3:+87493429 | Msa0481410:CDS |
| CGAACCTCCAAAATTCTAGC+AGG | 0.565910 | 3_3:+87497287 | Msa0481410:CDS |
| GAAGTAGATAGTTGGAGCAA+GGG | 0.569135 | 3_3:-87492980 | None:intergenic |
| ACTGATATTAACGAGATGAA+AGG | 0.577779 | 3_3:+87493512 | Msa0481410:CDS |
| TTGGTGTAGGTGAACAATGC+TGG | 0.578381 | 3_3:+87491404 | Msa0481410:intron |
| TGCAAGAAATTGGCTTCAAG+AGG | 0.591172 | 3_3:+87491123 | Msa0481410:CDS |
| ATTTGTTTCTGGTTACACAA+TGG | 0.603998 | 3_3:+87493400 | Msa0481410:CDS |
| ATGCCAAATGAATGGGCAAG+AGG | 0.607172 | 3_3:+87493269 | Msa0481410:CDS |
| GTTGCTGGAGGAATAGTGAA+TGG | 0.611511 | 3_3:+87491428 | Msa0481410:CDS |
| CACAATTTATGCGGAAACGA+GGG | 0.612527 | 3_3:-87493469 | None:intergenic |
| ACACAATTTATGCGGAAACG+AGG | 0.622206 | 3_3:-87493470 | None:intergenic |
| TATCAGTCTTAACAAAGTCA+GGG | 0.628316 | 3_3:-87493496 | None:intergenic |
| GTGTAACCAGAAACAAATGT+TGG | 0.648385 | 3_3:-87493395 | None:intergenic |
| ATACAAGATTATGAGGACAA+AGG | 0.653076 | 3_3:-87497326 | None:intergenic |
| AACAATGCTGGTGTTGCTGG+AGG | 0.655043 | 3_3:+87491416 | Msa0481410:CDS |
| TCCAACTATCTACTTCACCC+AGG | 0.666566 | 3_3:+87492987 | Msa0481410:CDS |
| CGAATTCAGGAGCTCACCAG+AGG | 0.669931 | 3_3:+87497222 | Msa0481410:CDS |
| GTTAATGTCTCCTCTAGACG+TGG | 0.681942 | 3_3:+87493013 | Msa0481410:CDS |
| CAGGGCATACACAATTTATG+CGG | 0.694860 | 3_3:-87493478 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATGTATATATACTTTA+AGG | - | chr3_3:87493697-87493716 | None:intergenic | 10.0% |
| !!! | TTACCATTTTTATATATTTA+AGG | + | chr3_3:87493843-87493862 | Msa0481410:intron | 10.0% |
| !!! | TGTATTTTTTTTTTTTTACA+AGG | - | chr3_3:87494524-87494543 | None:intergenic | 10.0% |
| !! | AAAAAGATGTATAATAAATA+GGG | - | chr3_3:87494656-87494675 | None:intergenic | 10.0% |
| !! | ATATATATGTGAAGAAAAAA+AGG | - | chr3_3:87490992-87491011 | None:intergenic | 15.0% |
| !!! | ATTAAGTTTATTTACACTTT+TGG | + | chr3_3:87491376-87491395 | Msa0481410:intron | 15.0% |
| !!! | TACAACTTGTTAAAAAAAAT+AGG | - | chr3_3:87492170-87492189 | None:intergenic | 15.0% |
| !!! | AAATTTTCAAAAGCATATAT+AGG | + | chr3_3:87492207-87492226 | Msa0481410:intron | 15.0% |
| !!! | ATTTATTTTTATAGAACACA+AGG | + | chr3_3:87492282-87492301 | Msa0481410:intron | 15.0% |
| !!! | ATGAATTTTCAAATACTTTA+GGG | + | chr3_3:87493792-87493811 | Msa0481410:intron | 15.0% |
| !! | AGTCCTTAAATATATAAAAA+TGG | - | chr3_3:87493849-87493868 | None:intergenic | 15.0% |
| !! | TATATATTTAAGGACTAAAT+TGG | + | chr3_3:87493853-87493872 | Msa0481410:intron | 15.0% |
| !!! | TTTAATGTGTTATTGTTAAA+TGG | + | chr3_3:87494029-87494048 | Msa0481410:intron | 15.0% |
| !!! | TTAATGTGTTATTGTTAAAT+GGG | + | chr3_3:87494030-87494049 | Msa0481410:intron | 15.0% |
| !! | AAAGAAATAATTAATGTAGT+TGG | - | chr3_3:87494623-87494642 | None:intergenic | 15.0% |
| !! | AAAAGATGTATAATAAATAG+GGG | - | chr3_3:87494655-87494674 | None:intergenic | 15.0% |
| !! | GAAAAAGATGTATAATAAAT+AGG | - | chr3_3:87494657-87494676 | None:intergenic | 15.0% |
| !! | AATATGTTTGTAATTACTAT+TGG | - | chr3_3:87494750-87494769 | None:intergenic | 15.0% |
| !!! | GTATTGATTTTTATTTTTGA+TGG | - | chr3_3:87495067-87495086 | None:intergenic | 15.0% |
| !!! | GATCAAAATTTTATTTTTGA+TGG | - | chr3_3:87495106-87495125 | None:intergenic | 15.0% |
| !!! | ATATTAATTAGCATTTTTTC+TGG | - | chr3_3:87495626-87495645 | None:intergenic | 15.0% |
| !!! | ATGAATTGATTAGTATTTTT+AGG | - | chr3_3:87495949-87495968 | None:intergenic | 15.0% |
| !!! | ATTGTTTAAGTCTTTTAAAT+TGG | + | chr3_3:87496087-87496106 | Msa0481410:intron | 15.0% |
| !! | AACAATTAAAATTGACAAAA+TGG | - | chr3_3:87496449-87496468 | None:intergenic | 15.0% |
| !! | AGTAAAATTGAATTAAAAGT+TGG | - | chr3_3:87496496-87496515 | None:intergenic | 15.0% |
| !! | GAAGAAAAAAGATAATAAAA+GGG | - | chr3_3:87496574-87496593 | None:intergenic | 15.0% |
| !! | AGAAGAAAAAAGATAATAAA+AGG | - | chr3_3:87496575-87496594 | None:intergenic | 15.0% |
| !! | AGTTAATAAGAAGGAAAAAT+CGG | - | chr3_3:87491347-87491366 | None:intergenic | 20.0% |
| !!! | AAGTGATTTTGATTTTAACT+AGG | + | chr3_3:87492456-87492475 | Msa0481410:intron | 20.0% |
| !! | ATCGTAAGATAAATATAGTT+TGG | - | chr3_3:87492571-87492590 | None:intergenic | 20.0% |
| !! | AAGACAAAAAAATGATTACA+TGG | + | chr3_3:87492824-87492843 | Msa0481410:intron | 20.0% |
| !! | AACGTTACAAATGAAAAATT+TGG | + | chr3_3:87493311-87493330 | Msa0481410:CDS | 20.0% |
| !!! | TTTTTGAAAGATTACAAAGA+AGG | + | chr3_3:87493350-87493369 | Msa0481410:CDS | 20.0% |
| !!! | GATGAATTTTCAAATACTTT+AGG | + | chr3_3:87493791-87493810 | Msa0481410:intron | 20.0% |
| !! | TGGAGATAGAATATTAATTT+AGG | + | chr3_3:87493873-87493892 | Msa0481410:intron | 20.0% |
| !! | GGAGATAGAATATTAATTTA+GGG | + | chr3_3:87493874-87493893 | Msa0481410:intron | 20.0% |
| !!! | GCTTTTGAATAAATATTTGT+TGG | + | chr3_3:87494142-87494161 | Msa0481410:intron | 20.0% |
| !!! | GCATATATGTTATTTAACAA+GGG | - | chr3_3:87494233-87494252 | None:intergenic | 20.0% |
| !! | CTTGTTAAATAACATATATG+CGG | + | chr3_3:87494232-87494251 | Msa0481410:intron | 20.0% |
| !! | CTAATCAAAACAAAAAGAAA+AGG | - | chr3_3:87494501-87494520 | None:intergenic | 20.0% |
| !!! | TCAAAAAGGTCTTATAATTA+GGG | - | chr3_3:87494559-87494578 | None:intergenic | 20.0% |
| !! | GACAAAAAAAATTCTCAAAA+AGG | - | chr3_3:87494573-87494592 | None:intergenic | 20.0% |
| !! | ATCAGATAGTATTAATTAGT+GGG | - | chr3_3:87495176-87495195 | None:intergenic | 20.0% |
| !! | AATCAGATAGTATTAATTAG+TGG | - | chr3_3:87495177-87495196 | None:intergenic | 20.0% |
| !! | TTCGTTAGATGTTATTAATT+TGG | + | chr3_3:87495235-87495254 | Msa0481410:intron | 20.0% |
| !! | TAGAGAAAAACTTAGAAAAA+AGG | + | chr3_3:87495648-87495667 | Msa0481410:intron | 20.0% |
| !! | AGAGAAAAACTTAGAAAAAA+GGG | + | chr3_3:87495649-87495668 | Msa0481410:intron | 20.0% |
| !!! | ACTAGAAGTCAATTTTTTAA+GGG | - | chr3_3:87495722-87495741 | None:intergenic | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | - | chr3_3:87495936-87495955 | None:intergenic | 20.0% |
| !!! | AGAGACAGTTTTTTTTTTTT+AGG | - | chr3_3:87496241-87496260 | None:intergenic | 20.0% |
| !! | TTCTGTAATTGTTAAAAAAG+AGG | - | chr3_3:87496602-87496621 | None:intergenic | 20.0% |
| !! | AAAAAACTAAAAACAAAACC+TGG | - | chr3_3:87496640-87496659 | None:intergenic | 20.0% |
| !!! | TTAGTTTTTTTATTGCAGAA+TGG | + | chr3_3:87496650-87496669 | Msa0481410:intron | 20.0% |
| ! | CAACAAGTTTGATCATAATT+AGG | + | chr3_3:87491020-87491039 | Msa0481410:intron | 25.0% |
| ! | AGTTCATCAAAATCCAATTT+GGG | + | chr3_3:87491286-87491305 | Msa0481410:CDS | 25.0% |
| ! | TGACAAACAAGTTAATAAGA+AGG | - | chr3_3:87491356-87491375 | None:intergenic | 25.0% |
| !!! | ATTTACACTTTTGGAATCAT+TGG | + | chr3_3:87491385-87491404 | Msa0481410:intron | 25.0% |
| ! | ATATAAAAGATGACTAGAGA+TGG | - | chr3_3:87491670-87491689 | None:intergenic | 25.0% |
| !! | ATAGGTCCTTTAAGTTTATA+AGG | + | chr3_3:87491757-87491776 | Msa0481410:intron | 25.0% |
| ! | CTGAAACCTTATAAACTTAA+AGG | - | chr3_3:87491766-87491785 | None:intergenic | 25.0% |
| ! | AAGTTTATAAGGTTTCAGAT+AGG | + | chr3_3:87491768-87491787 | Msa0481410:intron | 25.0% |
| !!! | TTTAAGTTTCGAGTTTGTTT+CGG | + | chr3_3:87491794-87491813 | Msa0481410:intron | 25.0% |
| !! | ACATAAAAACTTTGGCTTAA+CGG | - | chr3_3:87491841-87491860 | None:intergenic | 25.0% |
| ! | GATATATCAGCTTTACTTAA+CGG | - | chr3_3:87491864-87491883 | None:intergenic | 25.0% |
| !!! | ACAAATCAATTTTGGCTTAA+CGG | + | chr3_3:87491961-87491980 | Msa0481410:intron | 25.0% |
| !!! | TTTAAGTTTCGAGTTTGTTT+CGG | - | chr3_3:87491794-87491813 | None:intergenic | 25.0% |
| !! | TCTGAAACTTAGAAACTTAA+AGG | + | chr3_3:87492095-87492114 | Msa0481410:intron | 25.0% |
| ! | GAAACAAACATGAAACTTAA+AGG | + | chr3_3:87492126-87492145 | Msa0481410:intron | 25.0% |
| !! | AATTGTTGAGATTTTCTACA+TGG | - | chr3_3:87492245-87492264 | None:intergenic | 25.0% |
| ! | AAGGTTGTGAATATTCATAA+AGG | + | chr3_3:87492301-87492320 | Msa0481410:intron | 25.0% |
| ! | CATCAAATAATGAATTGTTC+TGG | + | chr3_3:87492507-87492526 | Msa0481410:intron | 25.0% |
| ! | TCACAAATAAAACTTACTTG+CGG | - | chr3_3:87492736-87492755 | None:intergenic | 25.0% |
| !!! | TGGTATTGATTTGATTTTGT+AGG | + | chr3_3:87492844-87492863 | Msa0481410:intron | 25.0% |
| !!! | TTGATTTGATTTTGTAGGTA+AGG | + | chr3_3:87492849-87492868 | Msa0481410:intron | 25.0% |
| !!! | TGATTTGATTTTGTAGGTAA+GGG | + | chr3_3:87492850-87492869 | Msa0481410:intron | 25.0% |
| !!! | GTTTATTTCTACACATTCTT+CGG | - | chr3_3:87492924-87492943 | None:intergenic | 25.0% |
| ! | TGTGTAGAAATAAACTTCTT+TGG | + | chr3_3:87492929-87492948 | Msa0481410:CDS | 25.0% |
| ! | TTACGGACAAATTAAATTGA+TGG | - | chr3_3:87493651-87493670 | None:intergenic | 25.0% |
| ! | GTCTTGATATTAAGATGTTA+CGG | + | chr3_3:87493760-87493779 | Msa0481410:intron | 25.0% |
| ! | AGTACCAGAAACAATATAAT+AGG | - | chr3_3:87493948-87493967 | None:intergenic | 25.0% |
| ! | CAATGAAAAGTTACTATTCT+TGG | + | chr3_3:87494169-87494188 | Msa0481410:intron | 25.0% |
| !! | CGCATATATGTTATTTAACA+AGG | - | chr3_3:87494234-87494253 | None:intergenic | 25.0% |
| ! | AAATTAATGTGCAGATTTCA+TGG | + | chr3_3:87494325-87494344 | Msa0481410:intron | 25.0% |
| !! | CTCAAAAAGGTCTTATAATT+AGG | - | chr3_3:87494560-87494579 | None:intergenic | 25.0% |
| !!! | ATTCCCGTTATTTTTTCAAA+AGG | + | chr3_3:87494793-87494812 | Msa0481410:intron | 25.0% |
| !!! | TTCCCGTTATTTTTTCAAAA+GGG | + | chr3_3:87494794-87494813 | Msa0481410:intron | 25.0% |
| ! | AGAAAAAAGGACACTAATTA+AGG | - | chr3_3:87494901-87494920 | None:intergenic | 25.0% |
| ! | AGGTTAATAAGAGAGAAAAA+AGG | - | chr3_3:87494914-87494933 | None:intergenic | 25.0% |
| !!! | TTTTCTGAAAAATAGATGAC+AGG | + | chr3_3:87494968-87494987 | Msa0481410:intron | 25.0% |
| ! | ATCAAAATAAATCCTGTTGT+TGG | + | chr3_3:87495123-87495142 | Msa0481410:intron | 25.0% |
| ! | AATTAATACTATCTGATTCC+TGG | + | chr3_3:87495179-87495198 | Msa0481410:intron | 25.0% |
| ! | CTTTATGAGATCGTTAAAAA+GGG | - | chr3_3:87495288-87495307 | None:intergenic | 25.0% |
| ! | TCTTTATGAGATCGTTAAAA+AGG | - | chr3_3:87495289-87495308 | None:intergenic | 25.0% |
| ! | AAAAGAACAAAGAAACAACA+TGG | - | chr3_3:87495562-87495581 | None:intergenic | 25.0% |
| !! | TGTTTCTTTGTTCTTTTTAC+TGG | + | chr3_3:87495565-87495584 | Msa0481410:intron | 25.0% |
| !! | GTTTCTTTGTTCTTTTTACT+GGG | + | chr3_3:87495566-87495585 | Msa0481410:intron | 25.0% |
| !! | TTTCTTTGTTCTTTTTACTG+GGG | + | chr3_3:87495567-87495586 | Msa0481410:intron | 25.0% |
| ! | GAGAAAAACTTAGAAAAAAG+GGG | + | chr3_3:87495650-87495669 | Msa0481410:intron | 25.0% |
| !!! | CACTAGAAGTCAATTTTTTA+AGG | - | chr3_3:87495723-87495742 | None:intergenic | 25.0% |
| !! | AATTTGCTTATAATAGTGAC+CGG | - | chr3_3:87495757-87495776 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr3_3:87495792-87495811 | Msa0481410:intron | 25.0% |
| ! | ATGTATGTGGTCTATATTAT+AGG | + | chr3_3:87495805-87495824 | Msa0481410:intron | 25.0% |
| !! | AATGTGTTATACCCTAATTT+TGG | + | chr3_3:87495922-87495941 | Msa0481410:intron | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | - | chr3_3:87495937-87495956 | None:intergenic | 25.0% |
| ! | TATTTGCAAAATCACATAGA+AGG | + | chr3_3:87496019-87496038 | Msa0481410:intron | 25.0% |
| ! | ATTTGCAAAATCACATAGAA+GGG | + | chr3_3:87496020-87496039 | Msa0481410:intron | 25.0% |
| ! | TCAGATGCAGTTAAAAAAAA+TGG | - | chr3_3:87496316-87496335 | None:intergenic | 25.0% |
| !!! | TACTTTAAAGTACCTCATTT+AGG | + | chr3_3:87496405-87496424 | Msa0481410:intron | 25.0% |
| ! | ATGCAAATGTTAGAATTTGA+AGG | - | chr3_3:87496545-87496564 | None:intergenic | 25.0% |
| !!! | TTGCAATTTTGAGGAATAAA+AGG | - | chr3_3:87496677-87496696 | None:intergenic | 25.0% |
| ! | TATTCCTCAAAATTGCAAAA+AGG | + | chr3_3:87496679-87496698 | Msa0481410:CDS | 25.0% |
| !! | TTTTTGTGATGAAATTGGTA+CGG | - | chr3_3:87496972-87496991 | None:intergenic | 25.0% |
| AGAAAAAAAGGCAAAGGAAA+AGG | - | chr3_3:87490980-87490999 | None:intergenic | 30.0% | |
| ATGTGAAGAAAAAAAGGCAA+AGG | - | chr3_3:87490986-87491005 | None:intergenic | 30.0% | |
| ! | ACCTTGTTAATCTTGTTTCT+AGG | + | chr3_3:87491055-87491074 | Msa0481410:intron | 30.0% |
| ACCTAGAAACAAGATTAACA+AGG | - | chr3_3:87491059-87491078 | None:intergenic | 30.0% | |
| CTAATAAGGGAATTGGTTAT+GGG | + | chr3_3:87491097-87491116 | Msa0481410:CDS | 30.0% | |
| TTATGGGATATGCAAGAAAT+TGG | + | chr3_3:87491113-87491132 | Msa0481410:CDS | 30.0% | |
| GTAGAAAGTTTGAAAGAGTT+AGG | + | chr3_3:87491195-87491214 | Msa0481410:CDS | 30.0% | |
| CTAAAGAAGAAACACTTGTA+GGG | - | chr3_3:87491263-87491282 | None:intergenic | 30.0% | |
| ACTAAAGAAGAAACACTTGT+AGG | - | chr3_3:87491264-87491283 | None:intergenic | 30.0% | |
| GAGTTCATCAAAATCCAATT+TGG | + | chr3_3:87491285-87491304 | Msa0481410:CDS | 30.0% | |
| TGGAGAGAATGTTGTTAAAA+AGG | + | chr3_3:87491448-87491467 | Msa0481410:CDS | 30.0% | |
| GAAACAAACGTGAAACTTAA+AGG | - | chr3_3:87491735-87491754 | None:intergenic | 30.0% | |
| GAAACAAACTCGAAACTTAA+AGG | - | chr3_3:87492007-87492026 | None:intergenic | 30.0% | |
| ! | CTTAACGGACATAAAAACTT+TGG | - | chr3_3:87491849-87491868 | None:intergenic | 30.0% |
| !! | CTTAACGGACAAATCAATTT+TGG | + | chr3_3:87491953-87491972 | Msa0481410:intron | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | + | chr3_3:87492007-87492026 | Msa0481410:intron | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr3_3:87492034-87492053 | None:intergenic | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | + | chr3_3:87492036-87492055 | Msa0481410:intron | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr3_3:87492045-87492064 | None:intergenic | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | + | chr3_3:87492007-87492026 | Msa0481410:intron | 30.0% | |
| ! | CAAAAGCATATATAGGTTGT+TGG | + | chr3_3:87492214-87492233 | Msa0481410:intron | 30.0% |
| TTAACTAGGTTATTAAGCTC+AGG | + | chr3_3:87492470-87492489 | Msa0481410:intron | 30.0% | |
| TTCCACCTAAAAATTGAACT+CGG | - | chr3_3:87492538-87492557 | None:intergenic | 30.0% | |
| TATGTTAACTTTCCGATTCT+CGG | - | chr3_3:87492622-87492641 | None:intergenic | 30.0% | |
| CAAATTAATCTTCAGATTGC+AGG | - | chr3_3:87492800-87492819 | None:intergenic | 30.0% | |
| CTGCAATCTGAAGATTAATT+TGG | + | chr3_3:87492798-87492817 | Msa0481410:intron | 30.0% | |
| !! | GATTTGATTTTGTAGGTAAG+GGG | + | chr3_3:87492851-87492870 | Msa0481410:intron | 30.0% |
| TTCATTTGGCATAAACTGAA+AGG | - | chr3_3:87493261-87493280 | None:intergenic | 30.0% | |
| TTCAGTTTATGCCAAATGAA+TGG | + | chr3_3:87493261-87493280 | Msa0481410:intron | 30.0% | |
| TCAGTTTATGCCAAATGAAT+GGG | + | chr3_3:87493262-87493281 | Msa0481410:intron | 30.0% | |
| !! | GAGCATTGGAAACAAAAAAT+TGG | + | chr3_3:87493372-87493391 | Msa0481410:CDS | 30.0% |
| !! | ATTTGTTTCTGGTTACACAA+TGG | + | chr3_3:87493400-87493419 | Msa0481410:CDS | 30.0% |
| !! | CAGCTTTAAATTCTTACACA+AGG | + | chr3_3:87493429-87493448 | Msa0481410:CDS | 30.0% |
| TATCAGTCTTAACAAAGTCA+GGG | - | chr3_3:87493499-87493518 | None:intergenic | 30.0% | |
| ATATCAGTCTTAACAAAGTC+AGG | - | chr3_3:87493500-87493519 | None:intergenic | 30.0% | |
| ACTGATATTAACGAGATGAA+AGG | + | chr3_3:87493512-87493531 | Msa0481410:CDS | 30.0% | |
| CTGATATTAACGAGATGAAA+GGG | + | chr3_3:87493513-87493532 | Msa0481410:CDS | 30.0% | |
| GTAGAAAAAATAGACCAGAA+GGG | - | chr3_3:87493601-87493620 | None:intergenic | 30.0% | |
| TGTAGAAAAAATAGACCAGA+AGG | - | chr3_3:87493602-87493621 | None:intergenic | 30.0% | |
| TTAGAGAGAGTGATGATTTA+CGG | - | chr3_3:87493668-87493687 | None:intergenic | 30.0% | |
| AATATAATAGGCCACAAGTA+GGG | - | chr3_3:87493936-87493955 | None:intergenic | 30.0% | |
| !!! | GGTTTTGATTCAAGTGATAA+AGG | + | chr3_3:87494253-87494272 | Msa0481410:intron | 30.0% |
| ! | AAAGGTCTTATAATTAGGGA+CGG | - | chr3_3:87494555-87494574 | None:intergenic | 30.0% |
| ATGTAGTTGGAAATAGCAAA+GGG | - | chr3_3:87494610-87494629 | None:intergenic | 30.0% | |
| AATGTAGTTGGAAATAGCAA+AGG | - | chr3_3:87494611-87494630 | None:intergenic | 30.0% | |
| ! | ATTTTATCCCTTAAGTGAGA+GGG | - | chr3_3:87494720-87494739 | None:intergenic | 30.0% |
| ! | AATTTTATCCCTTAAGTGAG+AGG | - | chr3_3:87494721-87494740 | None:intergenic | 30.0% |
| ! | AATAACGGGAATTAAGATAG+TGG | - | chr3_3:87494785-87494804 | None:intergenic | 30.0% |
| !! | GACCCTTTTGAAAAAATAAC+GGG | - | chr3_3:87494799-87494818 | None:intergenic | 30.0% |
| !! | GGACCCTTTTGAAAAAATAA+CGG | - | chr3_3:87494800-87494819 | None:intergenic | 30.0% |
| TTCAAAAGGGTCCTATAATT+AGG | + | chr3_3:87494807-87494826 | Msa0481410:intron | 30.0% | |
| TCAAAAGGGTCCTATAATTA+GGG | + | chr3_3:87494808-87494827 | Msa0481410:intron | 30.0% | |
| !!! | TTTCTTGGTTCTTTTTTCTG+GGG | - | chr3_3:87495011-87495030 | None:intergenic | 30.0% |
| !!! | GTTTCTTGGTTCTTTTTTCT+GGG | - | chr3_3:87495012-87495031 | None:intergenic | 30.0% |
| !!! | TGTTTCTTGGTTCTTTTTTC+TGG | - | chr3_3:87495013-87495032 | None:intergenic | 30.0% |
| ! | ATCAGAGTATTAATTCTCCA+TGG | - | chr3_3:87495036-87495055 | None:intergenic | 30.0% |
| AAAATAAATCCTGTTGTTGG+CGG | + | chr3_3:87495126-87495145 | Msa0481410:intron | 30.0% | |
| TCTATTAAGTGTGATTAACG+TGG | - | chr3_3:87495462-87495481 | None:intergenic | 30.0% | |
| !! | TTTTCTGGAAAATAGATGAC+AGG | - | chr3_3:87495611-87495630 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr3_3:87495873-87495892 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr3_3:87495874-87495893 | Msa0481410:intron | 30.0% |
| ! | GATTAAAATGAGTTGAATGC+AGG | - | chr3_3:87496060-87496079 | None:intergenic | 30.0% |
| !! | CTGAAATGAATTTTGACATG+AGG | - | chr3_3:87496135-87496154 | None:intergenic | 30.0% |
| !!! | TTGGACTATTTTTGGACTTT+GGG | - | chr3_3:87496706-87496725 | None:intergenic | 30.0% |
| ! | TGAGCTTTTTGTGATGAAAT+TGG | - | chr3_3:87496977-87496996 | None:intergenic | 30.0% |
| ACGAAAACAATTCAAGATTG+AGG | + | chr3_3:87497003-87497022 | Msa0481410:CDS | 30.0% | |
| TATATTCGAAGTTCGAATTC+AGG | + | chr3_3:87497209-87497228 | Msa0481410:CDS | 30.0% | |
| ACTTGTAACAGGAGCTAATA+AGG | + | chr3_3:87491083-87491102 | Msa0481410:CDS | 35.0% | |
| CTTGTAACAGGAGCTAATAA+GGG | + | chr3_3:87491084-87491103 | Msa0481410:CDS | 35.0% | |
| GCTAATAAGGGAATTGGTTA+TGG | + | chr3_3:87491096-87491115 | Msa0481410:CDS | 35.0% | |
| ACTGCTAGAAATGAGAAAAG+AGG | + | chr3_3:87491162-87491181 | Msa0481410:CDS | 35.0% | |
| AGATATCAAGCTTCCCAAAT+TGG | - | chr3_3:87491302-87491321 | None:intergenic | 35.0% | |
| ATTTGGGAAGCTTGATATCT+TGG | + | chr3_3:87491302-87491321 | Msa0481410:CDS | 35.0% | |
| !!! | ACTTTTGGAATCATTGGTGT+AGG | + | chr3_3:87491391-87491410 | Msa0481410:intron | 35.0% |
| !! | AAGCATCGTTTAGTCTTGAT+CGG | + | chr3_3:87491531-87491550 | Msa0481410:intron | 35.0% |
| GTTATCAAATCCAACCAAGA+TGG | + | chr3_3:87491618-87491637 | Msa0481410:intron | 35.0% | |
| GTTTCACGTTTGTTTCAGAT+AGG | + | chr3_3:87491739-87491758 | Msa0481410:intron | 35.0% | |
| ! | TAAAAACTTTGGCTTAACGG+AGG | - | chr3_3:87491838-87491857 | None:intergenic | 35.0% |
| AAGCTGATATATCCGTTAAG+TGG | + | chr3_3:87491871-87491890 | Msa0481410:intron | 35.0% | |
| AGCTGATATATCCGTTAAGT+GGG | + | chr3_3:87491872-87491891 | Msa0481410:intron | 35.0% | |
| !! | GTTTCGAGTTTGTTTCAGAT+AGG | - | chr3_3:87492003-87492022 | None:intergenic | 35.0% |
| AACATGAAACTTAAAGGACC+TGG | + | chr3_3:87492132-87492151 | Msa0481410:intron | 35.0% | |
| ACATGAAACTTAAAGGACCT+GGG | + | chr3_3:87492133-87492152 | Msa0481410:intron | 35.0% | |
| AAGCATATATAGGTTGTTGG+AGG | + | chr3_3:87492217-87492236 | Msa0481410:intron | 35.0% | |
| TAGTCAAGAATGAGTAGTCA+GGG | + | chr3_3:87492384-87492403 | Msa0481410:intron | 35.0% | |
| ! | AGATCCCGAGTTCAATTTTT+AGG | + | chr3_3:87492530-87492549 | Msa0481410:intron | 35.0% |
| TCCACCTAAAAATTGAACTC+GGG | - | chr3_3:87492537-87492556 | None:intergenic | 35.0% | |
| ATGTTAACTTTCCGATTCTC+GGG | - | chr3_3:87492621-87492640 | None:intergenic | 35.0% | |
| TAAGGGGTGAAATATCTGAT+TGG | + | chr3_3:87492867-87492886 | Msa0481410:CDS | 35.0% | |
| CAATTGTGTCAATATCGTGT+CGG | + | chr3_3:87493163-87493182 | Msa0481410:intron | 35.0% | |
| ! | AGATTACAAAGAAGGAGCAT+TGG | + | chr3_3:87493358-87493377 | Msa0481410:CDS | 35.0% |
| AATTGGCCAACATTTGTTTC+TGG | + | chr3_3:87493389-87493408 | Msa0481410:CDS | 35.0% | |
| GTGTAACCAGAAACAAATGT+TGG | - | chr3_3:87493398-87493417 | None:intergenic | 35.0% | |
| !!! | GGGTTTTTAAGCATTGATGA+AGG | + | chr3_3:87493533-87493552 | Msa0481410:CDS | 35.0% |
| CAATATAATAGGCCACAAGT+AGG | - | chr3_3:87493937-87493956 | None:intergenic | 35.0% | |
| GTGGCCTATTATATTGTTTC+TGG | + | chr3_3:87493941-87493960 | Msa0481410:intron | 35.0% | |
| TCAAAGTAGCAACTTTGACT+TGG | + | chr3_3:87494091-87494110 | Msa0481410:intron | 35.0% | |
| GTGCAATATTGCACATGTTA+AGG | - | chr3_3:87494204-87494223 | None:intergenic | 35.0% | |
| GCAGATTTCATGGTTAAGTT+AGG | + | chr3_3:87494335-87494354 | Msa0481410:intron | 35.0% | |
| TAAGAATCCGATATTCGAAG+AGG | - | chr3_3:87494363-87494382 | None:intergenic | 35.0% | |
| ! | GCAAAGGGGTCTTATAAAAA+GGG | - | chr3_3:87494595-87494614 | None:intergenic | 35.0% |
| ! | AGCAAAGGGGTCTTATAAAA+AGG | - | chr3_3:87494596-87494615 | None:intergenic | 35.0% |
| TGTAGTTGGAAATAGCAAAG+GGG | - | chr3_3:87494609-87494628 | None:intergenic | 35.0% | |
| AAAAGAACCAAGAAACACCA+TGG | + | chr3_3:87495016-87495035 | Msa0481410:intron | 35.0% | |
| TAATTCTCCATGGTGTTTCT+TGG | - | chr3_3:87495026-87495045 | None:intergenic | 35.0% | |
| !! | GAAAAAAGGGGCACTAATTA+AGG | + | chr3_3:87495662-87495681 | Msa0481410:intron | 35.0% |
| TTTGACATGAGGTTGAAACA+AGG | - | chr3_3:87496124-87496143 | None:intergenic | 35.0% | |
| AAATGACTAAAATGCCCCTA+GGG | - | chr3_3:87496194-87496213 | None:intergenic | 35.0% | |
| GGTCATTTCACACGAAATTT+CGG | + | chr3_3:87496371-87496390 | Msa0481410:intron | 35.0% | |
| !! | AATGGACTAAAACGAACCAA+TGG | - | chr3_3:87496431-87496450 | None:intergenic | 35.0% |
| !!! | CTTGGACTATTTTTGGACTT+TGG | - | chr3_3:87496707-87496726 | None:intergenic | 35.0% |
| CAAAGTCCAAAAATAGTCCA+AGG | + | chr3_3:87496705-87496724 | Msa0481410:CDS | 35.0% | |
| ! | CAATGATTGGAGCCTTTTAT+AGG | - | chr3_3:87496794-87496813 | None:intergenic | 35.0% |
| ATGAGTTGTTGAAATCTGAG+TGG | - | chr3_3:87496822-87496841 | None:intergenic | 35.0% | |
| TCCAGAAACGAAATTCTTCA+AGG | + | chr3_3:87496881-87496900 | Msa0481410:CDS | 35.0% | |
| TCCTTGAAGAATTTCGTTTC+TGG | - | chr3_3:87496885-87496904 | None:intergenic | 35.0% | |
| ATTGAGCTTGAATGGAGTTA+GGG | - | chr3_3:87496938-87496957 | None:intergenic | 35.0% | |
| AATTGAGCTTGAATGGAGTT+AGG | - | chr3_3:87496939-87496958 | None:intergenic | 35.0% | |
| TGTGAAGAATTGAGCTTGAA+TGG | - | chr3_3:87496946-87496965 | None:intergenic | 35.0% | |
| ! | CGTTCATCCTCTTGATAATT+CGG | - | chr3_3:87497102-87497121 | None:intergenic | 35.0% |
| CGAATTATCAAGAGGATGAA+CGG | + | chr3_3:87497100-87497119 | Msa0481410:intron | 35.0% | |
| ! | TTTACCTGCTAGAATTTTGG+AGG | - | chr3_3:87497294-87497313 | None:intergenic | 35.0% |
| TCTAGGTATGCACTTGTAAC+AGG | + | chr3_3:87491072-87491091 | Msa0481410:intron | 40.0% | |
| ACAGGAGCTAATAAGGGAAT+TGG | + | chr3_3:87491090-87491109 | Msa0481410:CDS | 40.0% | |
| ! | TGCAAGAAATTGGCTTCAAG+AGG | + | chr3_3:87491123-87491142 | Msa0481410:CDS | 40.0% |
| !! | ATTGGCTTCAAGAGGTGTTA+TGG | + | chr3_3:87491131-87491150 | Msa0481410:CDS | 40.0% |
| ATGCTGACAACAAGAATGCA+TGG | - | chr3_3:87491509-87491528 | None:intergenic | 40.0% | |
| !! | ATCGTTTAGTCTTGATCGGA+CGG | + | chr3_3:87491535-87491554 | Msa0481410:intron | 40.0% |
| !!! | TTTTTTTGCCAATACCTCGC+TGG | + | chr3_3:87491707-87491726 | Msa0481410:intron | 40.0% |
| ATATATCCGTTAAGTGGGTG+AGG | + | chr3_3:87491877-87491896 | Msa0481410:intron | 40.0% | |
| ! | CCAGATCAACTTTGGCTTAA+CGG | + | chr3_3:87491938-87491957 | Msa0481410:intron | 40.0% |
| !! | GTTTCGAGTTTGTTTCGGAT+AGG | - | chr3_3:87491799-87491818 | None:intergenic | 40.0% |
| CATGAAACTTAAAGGACCTG+GGG | + | chr3_3:87492134-87492153 | Msa0481410:intron | 40.0% | |
| GTAGTCAAGAATGAGTAGTC+AGG | + | chr3_3:87492383-87492402 | Msa0481410:intron | 40.0% | |
| AGTCAAGAATGAGTAGTCAG+GGG | + | chr3_3:87492385-87492404 | Msa0481410:intron | 40.0% | |
| !! | TCCCGAGTTCAATTTTTAGG+TGG | + | chr3_3:87492533-87492552 | Msa0481410:intron | 40.0% |
| !! | CGATCGATTCGAGATTACTA+TGG | + | chr3_3:87492587-87492606 | Msa0481410:intron | 40.0% |
| GAAGTAGATAGTTGGAGCAA+GGG | - | chr3_3:87492983-87493002 | None:intergenic | 40.0% | |
| TGAAGTAGATAGTTGGAGCA+AGG | - | chr3_3:87492984-87493003 | None:intergenic | 40.0% | |
| GAGGAGACATTAACAATCCT+GGG | - | chr3_3:87493007-87493026 | None:intergenic | 40.0% | |
| AGAGGAGACATTAACAATCC+TGG | - | chr3_3:87493008-87493027 | None:intergenic | 40.0% | |
| ! | CTTGAATTTTCCACGTCTAG+AGG | - | chr3_3:87493026-87493045 | None:intergenic | 40.0% |
| CTCTAGACGTGGAAAATTCA+AGG | + | chr3_3:87493024-87493043 | Msa0481410:CDS | 40.0% | |
| GAGAGAGAGAGAGAAAAATG+TGG | - | chr3_3:87493061-87493080 | None:intergenic | 40.0% | |
| CGACACGATATTGACACAAT+TGG | - | chr3_3:87493165-87493184 | None:intergenic | 40.0% | |
| ACGTCTTCAATCTCAAGTGT+CGG | + | chr3_3:87493201-87493220 | Msa0481410:intron | 40.0% | |
| CACAATTTATGCGGAAACGA+GGG | - | chr3_3:87493472-87493491 | None:intergenic | 40.0% | |
| ACACAATTTATGCGGAAACG+AGG | - | chr3_3:87493473-87493492 | None:intergenic | 40.0% | |
| CAGGGCATACACAATTTATG+CGG | - | chr3_3:87493481-87493500 | None:intergenic | 40.0% | |
| ! | TGTTTGTTACACTCTTCACG+AGG | + | chr3_3:87494301-87494320 | Msa0481410:intron | 40.0% |
| TTAGGAGCCTCTTCGAATAT+CGG | + | chr3_3:87494353-87494372 | Msa0481410:intron | 40.0% | |
| TAAACCAACCCTCTCACTTA+AGG | + | chr3_3:87494709-87494728 | Msa0481410:intron | 40.0% | |
| AAACCAACCCTCTCACTTAA+GGG | + | chr3_3:87494710-87494729 | Msa0481410:intron | 40.0% | |
| AAGGGTCCTATAATTAGGGA+CGG | + | chr3_3:87494812-87494831 | Msa0481410:intron | 40.0% | |
| GTTACGATCAATGTGCACAT+CGG | - | chr3_3:87494854-87494873 | None:intergenic | 40.0% | |
| TAAGTTGTGCAAGATTGCAC+AGG | - | chr3_3:87494876-87494895 | None:intergenic | 40.0% | |
| ATTCCTGGAGTAGCAAAAAG+AGG | + | chr3_3:87495194-87495213 | Msa0481410:intron | 40.0% | |
| GAGATCGTTAAAAAGGGTGA+TGG | - | chr3_3:87495282-87495301 | None:intergenic | 40.0% | |
| TTCTAGTGACCTATTCCTTC+CGG | + | chr3_3:87495735-87495754 | Msa0481410:intron | 40.0% | |
| TAATAGTGACCGGAAGGAAT+AGG | - | chr3_3:87495747-87495766 | None:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+AGG | - | chr3_3:87495753-87495772 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr3_3:87495869-87495888 | None:intergenic | 40.0% |
| ! | TTTTAGTCAGTTTAGCCCCT+AGG | + | chr3_3:87496175-87496194 | Msa0481410:intron | 40.0% |
| TTTAGTCAGTTTAGCCCCTA+GGG | + | chr3_3:87496176-87496195 | Msa0481410:intron | 40.0% | |
| AATGACTAAAATGCCCCTAG+GGG | - | chr3_3:87496193-87496212 | None:intergenic | 40.0% | |
| GAAATGACTAAAATGCCCCT+AGG | - | chr3_3:87496195-87496214 | None:intergenic | 40.0% | |
| AAGTACCTCATTTAGGCCAT+TGG | + | chr3_3:87496412-87496431 | Msa0481410:intron | 40.0% | |
| AACAAAACCTGGCACTAATG+AGG | - | chr3_3:87496629-87496648 | None:intergenic | 40.0% | |
| ! | GGGACCTTTTTGCAATTTTG+AGG | - | chr3_3:87496686-87496705 | None:intergenic | 40.0% |
| TACACTTGGCAGCCTATAAA+AGG | + | chr3_3:87496779-87496798 | Msa0481410:intron | 40.0% | |
| TTGTTGAAATCTGAGTGGCA+TGG | - | chr3_3:87496817-87496836 | None:intergenic | 40.0% | |
| ! | TCGTTTCTGGATTCTGTTAG+AGG | - | chr3_3:87496872-87496891 | None:intergenic | 40.0% |
| TGAATGGAGTTAGGGTTCAA+TGG | - | chr3_3:87496930-87496949 | None:intergenic | 40.0% | |
| CACAATTCTCAGAGATTCGA+AGG | + | chr3_3:87497037-87497056 | Msa0481410:intron | 40.0% | |
| TCCAACACCGAATTATCAAG+AGG | + | chr3_3:87497092-87497111 | Msa0481410:intron | 40.0% | |
| !! | TCCTCTTGATAATTCGGTGT+TGG | - | chr3_3:87497096-87497115 | None:intergenic | 40.0% |
| AGAATGGCGAAAAGATGATC+TGG | - | chr3_3:87497261-87497280 | None:intergenic | 40.0% | |
| ! | CGGTTTACCTGCTAGAATTT+TGG | - | chr3_3:87497297-87497316 | None:intergenic | 40.0% |
| GAGGACAAAGGTGAGTTTAA+CGG | - | chr3_3:87497317-87497336 | None:intergenic | 40.0% | |
| TGGGAAGCTTGATATCTTGG+TGG | + | chr3_3:87491305-87491324 | Msa0481410:intron | 45.0% | |
| GGGAAGCTTGATATCTTGGT+GGG | + | chr3_3:87491306-87491325 | Msa0481410:intron | 45.0% | |
| TTGGTGTAGGTGAACAATGC+TGG | + | chr3_3:87491404-87491423 | Msa0481410:intron | 45.0% | |
| GTTGCTGGAGGAATAGTGAA+TGG | + | chr3_3:87491428-87491447 | Msa0481410:CDS | 45.0% | |
| ! | AGATGACTTGCACACCATCT+TGG | - | chr3_3:87491635-87491654 | None:intergenic | 45.0% |
| TAAAGGATCCAGCGAGGTAT+TGG | - | chr3_3:87491718-87491737 | None:intergenic | 45.0% | |
| GAAACTTAAAGGATCCAGCG+AGG | - | chr3_3:87491724-87491743 | None:intergenic | 45.0% | |
| CTTAACGGAGGTTGACAGAA+AGG | - | chr3_3:87491826-87491845 | None:intergenic | 45.0% | |
| TTCCCAGACCAGATCAACTT+TGG | + | chr3_3:87491930-87491949 | Msa0481410:intron | 45.0% | |
| ! | AGCCAAAGTTGATCTGGTCT+GGG | - | chr3_3:87491935-87491954 | None:intergenic | 45.0% |
| ! | AAGCCAAAGTTGATCTGGTC+TGG | - | chr3_3:87491936-87491955 | None:intergenic | 45.0% |
| ! | CCGTTAAGCCAAAGTTGATC+TGG | - | chr3_3:87491941-87491960 | None:intergenic | 45.0% |
| AATAGGTCAAATACCTCCCC+AGG | - | chr3_3:87492153-87492172 | None:intergenic | 45.0% | |
| TGGTCATCTTTCCCGAGAAT+CGG | + | chr3_3:87492607-87492626 | Msa0481410:intron | 45.0% | |
| TCCAACTATCTACTTCACCC+AGG | + | chr3_3:87492987-87493006 | Msa0481410:CDS | 45.0% | |
| TCCTGGGTGAAGTAGATAGT+TGG | - | chr3_3:87492991-87493010 | None:intergenic | 45.0% | |
| GTTAATGTCTCCTCTAGACG+TGG | + | chr3_3:87493013-87493032 | Msa0481410:CDS | 45.0% | |
| ! | TGTCAATATCGTGTCGGTGT+CGG | + | chr3_3:87493169-87493188 | Msa0481410:intron | 45.0% |
| ATGCCAAATGAATGGGCAAG+AGG | + | chr3_3:87493269-87493288 | Msa0481410:CDS | 45.0% | |
| ACTCCTCTTGCCCATTCATT+TGG | - | chr3_3:87493275-87493294 | None:intergenic | 45.0% | |
| GGCAACAATGCTAGATTCAC+AGG | - | chr3_3:87493569-87493588 | None:intergenic | 45.0% | |
| CTAGCATTGTTGCCAGATGA+TGG | + | chr3_3:87493575-87493594 | Msa0481410:CDS | 45.0% | |
| ATAATAGGCCACAAGTAGGG+CGG | - | chr3_3:87493933-87493952 | None:intergenic | 45.0% | |
| ! | GCATCTCCTCTAGTTTGATG+CGG | + | chr3_3:87494422-87494441 | Msa0481410:intron | 45.0% |
| TTCCAACCGCATCAAACTAG+AGG | - | chr3_3:87494431-87494450 | None:intergenic | 45.0% | |
| ! | GGTCTTATAATTAGGGACGG+AGG | - | chr3_3:87494552-87494571 | None:intergenic | 45.0% |
| TATCCCTTAAGTGAGAGGGT+TGG | - | chr3_3:87494716-87494735 | None:intergenic | 45.0% | |
| CTACCTCCGTCCCTAATTAT+AGG | - | chr3_3:87494546-87494565 | None:intergenic | 45.0% | |
| ATTGAATCACCGCCAACAAC+AGG | - | chr3_3:87495138-87495157 | None:intergenic | 45.0% | |
| ! | TCTCCTCTTTTTGCTACTCC+AGG | - | chr3_3:87495200-87495219 | None:intergenic | 45.0% |
| GAGTCATAAGCTCCCAAACA+GGG | + | chr3_3:87495391-87495410 | Msa0481410:intron | 45.0% | |
| ATAAGCTCCCAAACAGGGTT+GGG | + | chr3_3:87495396-87495415 | Msa0481410:intron | 45.0% | |
| GATTGATCCCAACCCTGTTT+GGG | - | chr3_3:87495406-87495425 | None:intergenic | 45.0% | |
| AGATTGATCCCAACCCTGTT+TGG | - | chr3_3:87495407-87495426 | None:intergenic | 45.0% | |
| TAAGCTGTGCAAGATTGCAC+AGG | + | chr3_3:87495687-87495706 | Msa0481410:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr3_3:87495870-87495889 | None:intergenic | 45.0% |
| TTAGTCAGTTTAGCCCCTAG+GGG | + | chr3_3:87496177-87496196 | Msa0481410:intron | 45.0% | |
| !! | TTTTTAGTCGTTTCAGCCCC+AGG | + | chr3_3:87496340-87496359 | Msa0481410:intron | 45.0% |
| ! | TTTTAGTCGTTTCAGCCCCA+GGG | + | chr3_3:87496341-87496360 | Msa0481410:intron | 45.0% |
| AAATGACCAAAATGCCCCTG+GGG | - | chr3_3:87496359-87496378 | None:intergenic | 45.0% | |
| GAAATGACCAAAATGCCCCT+GGG | - | chr3_3:87496360-87496379 | None:intergenic | 45.0% | |
| TGAAATGACCAAAATGCCCC+TGG | - | chr3_3:87496361-87496380 | None:intergenic | 45.0% | |
| ACGAACCAATGGCCTAAATG+AGG | - | chr3_3:87496420-87496439 | None:intergenic | 45.0% | |
| ! | TACAGGTGTCAGGTTGCAAT+TGG | + | chr3_3:87496748-87496767 | Msa0481410:CDS | 45.0% |
| AATTGGTCCAGTGGTACACT+TGG | + | chr3_3:87496765-87496784 | Msa0481410:intron | 45.0% | |
| TGGTATCTTCTTCTTGCCTC+TGG | - | chr3_3:87497241-87497260 | None:intergenic | 45.0% | |
| TGGAGGTTCGAACGAAAGAA+TGG | - | chr3_3:87497277-87497296 | None:intergenic | 45.0% | |
| CGAACCTCCAAAATTCTAGC+AGG | + | chr3_3:87497287-87497306 | Msa0481410:CDS | 45.0% | |
| !! | TTTAAATAAATTTAAAAAGT+AGG | + | chr3_3:87491583-87491602 | Msa0481410:intron | 5.0% |
| !!! | AAATGATTTTAAATTTTAAA+TGG | + | chr3_3:87492648-87492667 | Msa0481410:intron | 5.0% |
| !!! | CAAAAAAAATAATTTTTTTT+AGG | - | chr3_3:87492705-87492724 | None:intergenic | 5.0% |
| !!! | CTAAAAAAAATTATTTTTTT+TGG | + | chr3_3:87492703-87492722 | Msa0481410:intron | 5.0% |
| !! | CTATTTATAAAAATTATTAT+CGG | - | chr3_3:87493127-87493146 | None:intergenic | 5.0% |
| !! | GTGAACAATGCTGGTGTTGC+TGG | + | chr3_3:87491413-87491432 | Msa0481410:CDS | 50.0% |
| !! | AACAATGCTGGTGTTGCTGG+AGG | + | chr3_3:87491416-87491435 | Msa0481410:CDS | 50.0% |
| GACTTGCACACCATCTTGGT+TGG | - | chr3_3:87491631-87491650 | None:intergenic | 50.0% | |
| TATCCGTTAAGTGGGTGAGG+TGG | + | chr3_3:87491880-87491899 | Msa0481410:intron | 50.0% | |
| GAACCACCTCACCCACTTAA+CGG | - | chr3_3:87491886-87491905 | None:intergenic | 50.0% | |
| AGGTGGTTCTCTCTGACACT+TGG | + | chr3_3:87491897-87491916 | Msa0481410:intron | 50.0% | |
| GAAACTTAAAGGACCTGGGG+AGG | + | chr3_3:87492137-87492156 | Msa0481410:intron | 50.0% | |
| CTCTCTCTCTCTCTCTCTCA+CGG | + | chr3_3:87493068-87493087 | Msa0481410:intron | 50.0% | |
| CTCTCTCTCTCTCACGGTAT+TGG | + | chr3_3:87493074-87493093 | Msa0481410:intron | 50.0% | |
| TCATATGACCGCCCTACTTG+TGG | + | chr3_3:87493922-87493941 | Msa0481410:intron | 50.0% | |
| AGATGCAGCAAGTCATCAGG+AGG | - | chr3_3:87494408-87494427 | None:intergenic | 50.0% | |
| AGGAGATGCAGCAAGTCATC+AGG | - | chr3_3:87494411-87494430 | None:intergenic | 50.0% | |
| ! | CTCCTCTAGTTTGATGCGGT+TGG | + | chr3_3:87494426-87494445 | Msa0481410:intron | 50.0% |
| GGTCCTATAATTAGGGACGG+AGG | + | chr3_3:87494815-87494834 | Msa0481410:intron | 50.0% | |
| GTTTGGGAGCTTATGACTCG+AGG | - | chr3_3:87495390-87495409 | None:intergenic | 50.0% | |
| CGAGTCATAAGCTCCCAAAC+AGG | + | chr3_3:87495390-87495409 | Msa0481410:intron | 50.0% | |
| CATAAGCTCCCAAACAGGGT+TGG | + | chr3_3:87495395-87495414 | Msa0481410:intron | 50.0% | |
| TTTAGTCGTTTCAGCCCCAG+GGG | + | chr3_3:87496342-87496361 | Msa0481410:intron | 50.0% | |
| CACGAAATTTCGGCAGAGAG+AGG | + | chr3_3:87496381-87496400 | Msa0481410:intron | 50.0% | |
| GAACAGTCCTCATTAGTGCC+AGG | + | chr3_3:87496619-87496638 | Msa0481410:intron | 50.0% | |
| ! | GCTCGGCCTTGGACTATTTT+TGG | - | chr3_3:87496714-87496733 | None:intergenic | 50.0% |
| ! | GTATCTGGGCTTGTTTGGCT+CGG | - | chr3_3:87496731-87496750 | None:intergenic | 50.0% |
| AGCCAAACAAGCCCAGATAC+AGG | + | chr3_3:87496731-87496750 | Msa0481410:CDS | 50.0% | |
| ! | CACCTGTATCTGGGCTTGTT+TGG | - | chr3_3:87496736-87496755 | None:intergenic | 50.0% |
| GCAACCTGACACCTGTATCT+GGG | - | chr3_3:87496745-87496764 | None:intergenic | 50.0% | |
| TGCAACCTGACACCTGTATC+TGG | - | chr3_3:87496746-87496765 | None:intergenic | 50.0% | |
| ! | TCAGGTTGCAATTGGTCCAG+TGG | + | chr3_3:87496756-87496775 | Msa0481410:intron | 50.0% |
| CTGAGTGGCATGGCAATGAT+TGG | - | chr3_3:87496807-87496826 | None:intergenic | 50.0% | |
| CGGTGTGATCACAGAGTTTG+AGG | + | chr3_3:87497120-87497139 | Msa0481410:intron | 50.0% | |
| ! | TTGCCAGATGATGGCCCTTC+TGG | + | chr3_3:87493584-87493603 | Msa0481410:CDS | 55.0% |
| AGACCAGAAGGGCCATCATC+TGG | - | chr3_3:87493590-87493609 | None:intergenic | 55.0% | |
| CAGCAAGTCATCAGGAGGAG+AGG | - | chr3_3:87494403-87494422 | None:intergenic | 55.0% | |
| !!! | TTTCAGCCCCAGGGGCATTT+TGG | + | chr3_3:87496350-87496369 | Msa0481410:intron | 55.0% |
| CAAGCCCAGATACAGGTGTC+AGG | + | chr3_3:87496738-87496757 | Msa0481410:CDS | 55.0% | |
| TAGGCTGCCAAGTGTACCAC+TGG | - | chr3_3:87496775-87496794 | None:intergenic | 55.0% | |
| CGAATTCAGGAGCTCACCAG+AGG | + | chr3_3:87497222-87497241 | Msa0481410:CDS | 55.0% | |
| !! | GGGCTTGTTTGGCTCGGCCT+TGG | - | chr3_3:87496725-87496744 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 87490949 | 87497340 | 87490949 | ID=Msa0481410;Name=Msa0481410 |
| chr3_3 | mRNA | 87490949 | 87497340 | 87490949 | ID=Msa0481410-mRNA-1;Parent=Msa0481410;Name=Msa0481410-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|0.62|1|1|8|0|439 |
| chr3_3 | exon | 87490949 | 87490968 | 87490949 | ID=Msa0481410-mRNA-1:exon:25406;Parent=Msa0481410-mRNA-1 |
| chr3_3 | exon | 87491077 | 87491323 | 87491077 | ID=Msa0481410-mRNA-1:exon:25407;Parent=Msa0481410-mRNA-1 |
| chr3_3 | exon | 87491413 | 87491469 | 87491413 | ID=Msa0481410-mRNA-1:exon:25408;Parent=Msa0481410-mRNA-1 |
| chr3_3 | exon | 87492866 | 87493045 | 87492866 | ID=Msa0481410-mRNA-1:exon:25409;Parent=Msa0481410-mRNA-1 |
| chr3_3 | exon | 87493266 | 87493628 | 87493266 | ID=Msa0481410-mRNA-1:exon:25410;Parent=Msa0481410-mRNA-1 |
| chr3_3 | exon | 87496668 | 87496769 | 87496668 | ID=Msa0481410-mRNA-1:exon:25411;Parent=Msa0481410-mRNA-1 |
| chr3_3 | exon | 87496879 | 87497024 | 87496879 | ID=Msa0481410-mRNA-1:exon:25412;Parent=Msa0481410-mRNA-1 |
| chr3_3 | exon | 87497136 | 87497340 | 87497136 | ID=Msa0481410-mRNA-1:exon:25413;Parent=Msa0481410-mRNA-1 |
| chr3_3 | CDS | 87490949 | 87490968 | 87490949 | ID=Msa0481410-mRNA-1:cds;Parent=Msa0481410-mRNA-1 |
| chr3_3 | CDS | 87491077 | 87491323 | 87491077 | ID=Msa0481410-mRNA-1:cds;Parent=Msa0481410-mRNA-1 |
| chr3_3 | CDS | 87491413 | 87491469 | 87491413 | ID=Msa0481410-mRNA-1:cds;Parent=Msa0481410-mRNA-1 |
| chr3_3 | CDS | 87492866 | 87493045 | 87492866 | ID=Msa0481410-mRNA-1:cds;Parent=Msa0481410-mRNA-1 |
| chr3_3 | CDS | 87493266 | 87493628 | 87493266 | ID=Msa0481410-mRNA-1:cds;Parent=Msa0481410-mRNA-1 |
| chr3_3 | CDS | 87496668 | 87496769 | 87496668 | ID=Msa0481410-mRNA-1:cds;Parent=Msa0481410-mRNA-1 |
| chr3_3 | CDS | 87496879 | 87497024 | 87496879 | ID=Msa0481410-mRNA-1:cds;Parent=Msa0481410-mRNA-1 |
| chr3_3 | CDS | 87497136 | 87497340 | 87497136 | ID=Msa0481410-mRNA-1:cds;Parent=Msa0481410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
