AlfalfaGEDB | Msa0579080

M. sativa cultivar zhongmu-4 / Msa0579080

KEGG: K02437
GO: GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008144 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF01597.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579080	XP_003607890.1	98.065	155	3	0	1	155	1	155	1.12e-108	316

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579080	sp\|O82179\|GCSH2_ARATH	78.205	156	33	1	1	155	1	156	2.76e-87	254

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579080	Q2MGQ2	98.065	155	3	0	1	155	1	155	5.34e-109	316

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0007810	Msa0579080	-0.801069	1.071516e-48	-8.615850e-47
Msa0022400	Msa0579080	0.829709	4.424082e-55	-8.615850e-47
Msa0032780	Msa0579080	0.802949	4.400407e-49	-8.615850e-47
Msa0033220	Msa0579080	0.827256	1.729376e-54	-8.615850e-47
Msa0039750	Msa0579080	0.811525	6.703490e-51	-8.615850e-47
Msa0044010	Msa0579080	0.816522	5.294765e-52	-8.615850e-47
Msa0044160	Msa0579080	0.802934	4.432696e-49	-8.615850e-47
Msa0044440	Msa0579080	0.829553	4.826086e-55	-8.615850e-47
Msa0044530	Msa0579080	-0.823202	1.572180e-53	-8.615850e-47
Msa0045810	Msa0579080	0.802670	5.025578e-49	-8.615850e-47
Msa0063940	Msa0579080	0.869500	2.955478e-66	-8.615850e-47
Msa0079880	Msa0579080	0.816551	5.217525e-52	-8.615850e-47
Msa0080030	Msa0579080	0.828973	6.673076e-55	-8.615850e-47
Msa0091220	Msa0579080	-0.813374	2.644264e-51	-8.615850e-47
Msa0091240	Msa0579080	-0.820408	6.969559e-53	-8.615850e-47
Msa0098240	Msa0579080	0.848599	5.529740e-60	-8.615850e-47
Msa0101530	Msa0579080	0.856130	3.961601e-62	-8.615850e-47
Msa0105650	Msa0579080	0.809084	2.253047e-50	-8.615850e-47
Msa0118150	Msa0579080	0.810280	1.246541e-50	-8.615850e-47
Msa0136180	Msa0579080	-0.808404	3.149460e-50	-8.615850e-47
Msa0139500	Msa0579080	0.802675	5.013227e-49	-8.615850e-47
Msa0142430	Msa0579080	0.829965	3.831479e-55	-8.615850e-47
Msa0161480	Msa0579080	0.827411	1.588057e-54	-8.615850e-47
Msa0165640	Msa0579080	0.840434	8.715283e-58	-8.615850e-47
Msa0173600	Msa0579080	-0.819588	1.073500e-52	-8.615850e-47
Msa0183310	Msa0579080	-0.850790	1.352395e-60	-8.615850e-47
Msa0183710	Msa0579080	0.812357	4.416510e-51	-8.615850e-47
Msa0192050	Msa0579080	0.808284	3.340030e-50	-8.615850e-47
Msa0192250	Msa0579080	0.813402	2.606532e-51	-8.615850e-47
Msa0195230	Msa0579080	0.828338	9.504959e-55	-8.615850e-47
Msa0195260	Msa0579080	0.825596	4.300503e-54	-8.615850e-47
Msa0204950	Msa0579080	0.815312	9.860834e-52	-8.615850e-47
Msa0219280	Msa0579080	0.824494	7.830764e-54	-8.615850e-47
Msa0224110	Msa0579080	0.818894	1.544681e-52	-8.615850e-47
Msa0234170	Msa0579080	0.820894	5.389151e-53	-8.615850e-47
Msa0384590	Msa0579080	0.871011	9.456066e-67	-8.615850e-47
Msa0386880	Msa0579080	0.802069	6.682934e-49	-8.615850e-47
Msa0388210	Msa0579080	0.810293	1.238745e-50	-8.615850e-47
Msa0397130	Msa0579080	0.812802	3.529598e-51	-8.615850e-47
Msa0402070	Msa0579080	-0.802285	6.031113e-49	-8.615850e-47
Msa0412790	Msa0579080	0.801252	9.828749e-49	-8.615850e-47
Msa0421220	Msa0579080	-0.819840	9.403081e-53	-8.615850e-47
Msa0422070	Msa0579080	0.822181	2.717525e-53	-8.615850e-47
Msa0422980	Msa0579080	0.820937	5.268253e-53	-8.615850e-47
Msa0430130	Msa0579080	0.816265	6.044256e-52	-8.615850e-47
Msa0434660	Msa0579080	0.854122	1.518694e-61	-8.615850e-47
Msa0436440	Msa0579080	0.823807	1.135538e-53	-8.615850e-47
Msa0437440	Msa0579080	-0.830249	3.266018e-55	-8.615850e-47
Msa0437520	Msa0579080	0.803222	3.863984e-49	-8.615850e-47
Msa0438680	Msa0579080	-0.806445	8.196339e-50	-8.615850e-47
Msa0468660	Msa0579080	0.807284	5.448741e-50	-8.615850e-47
Msa0478430	Msa0579080	0.818407	1.992556e-52	-8.615850e-47
Msa0480280	Msa0579080	0.822503	2.287258e-53	-8.615850e-47
Msa0265250	Msa0579080	0.820517	6.577522e-53	-8.615850e-47
Msa0276860	Msa0579080	0.814337	1.621770e-51	-8.615850e-47
Msa0279000	Msa0579080	0.804990	1.656919e-49	-8.615850e-47
Msa0281470	Msa0579080	0.834313	3.221003e-56	-8.615850e-47
Msa0298400	Msa0579080	0.823361	1.443662e-53	-8.615850e-47
Msa0320600	Msa0579080	0.807716	4.411960e-50	-8.615850e-47
Msa0336120	Msa0579080	0.816586	5.123827e-52	-8.615850e-47
Msa0354970	Msa0579080	-0.853131	2.926559e-61	-8.615850e-47
Msa0355080	Msa0579080	-0.861336	1.102003e-63	-8.615850e-47
Msa0358470	Msa0579080	0.800637	1.312832e-48	-8.615850e-47
Msa0484210	Msa0579080	-0.828985	6.631067e-55	-8.615850e-47
Msa0514540	Msa0579080	0.802323	5.924041e-49	-8.615850e-47
Msa0521510	Msa0579080	0.801881	7.303040e-49	-8.615850e-47
Msa0521610	Msa0579080	0.823954	1.048492e-53	-8.615850e-47
Msa0522540	Msa0579080	0.866557	2.613402e-65	-8.615850e-47
Msa0526150	Msa0579080	0.847327	1.240608e-59	-8.615850e-47
Msa0526500	Msa0579080	-0.820195	7.798254e-53	-8.615850e-47
Msa0540670	Msa0579080	0.846834	1.693470e-59	-8.615850e-47
Msa0566340	Msa0579080	0.802331	5.902395e-49	-8.615850e-47
Msa0566940	Msa0579080	-0.823908	1.075210e-53	-8.615850e-47
Msa0567330	Msa0579080	0.812851	3.443247e-51	-8.615850e-47
Msa0572360	Msa0579080	0.809342	1.984027e-50	-8.615850e-47
Msa0576320	Msa0579080	0.806600	7.602148e-50	-8.615850e-47
Msa0579080	Msa0579160	0.975327	9.462888e-140	-8.615850e-47
Msa0579080	Msa0579220	0.973278	3.696582e-136	-8.615850e-47
Msa0579080	Msa0582960	0.836922	7.044719e-57	-8.615850e-47
Msa0579080	Msa0590620	-0.813473	2.514413e-51	-8.615850e-47
Msa0579080	Msa0596630	0.810029	1.412507e-50	-8.615850e-47
Msa0579080	Msa0610240	-0.805597	1.236495e-49	-8.615850e-47
Msa0579080	Msa0610690	0.940793	1.269391e-100	-8.615850e-47
Msa0579080	Msa0630440	0.833325	5.691310e-56	-8.615850e-47
Msa0579080	Msa0651870	0.817137	3.854252e-52	-8.615850e-47
Msa0579080	Msa0651890	0.815831	7.557432e-52	-8.615850e-47
Msa0579080	Msa0657110	-0.803633	3.176028e-49	-8.615850e-47
Msa0579080	Msa0657710	0.800143	1.655018e-48	-8.615850e-47
Msa0579080	Msa0660150	0.814358	1.605014e-51	-8.615850e-47
Msa0579080	Msa0675120	0.815201	1.043750e-51	-8.615850e-47
Msa0579080	Msa0689660	0.816190	6.284003e-52	-8.615850e-47
Msa0579080	Msa0701090	-0.802268	6.081733e-49	-8.615850e-47
Msa0579080	Msa0702800	0.812889	3.377980e-51	-8.615850e-47
Msa0579080	Msa0703430	-0.807511	4.877769e-50	-8.615850e-47
Msa0579080	Msa0703950	0.815876	7.384362e-52	-8.615850e-47
Msa0579080	Msa0707360	0.840892	6.614279e-58	-8.615850e-47
Msa0579080	Msa0712860	0.826102	3.261768e-54	-8.615850e-47
Msa0579080	Msa0726170	-0.848293	6.720412e-60	-8.615850e-47
Msa0579080	Msa0741520	0.806146	9.479327e-50	-8.615850e-47
Msa0579080	Msa0742370	-0.861896	7.434966e-64	-8.615850e-47
Msa0579080	Msa0745140	0.805613	1.226574e-49	-8.615850e-47
Msa0579080	Msa0746650	0.853669	2.051333e-61	-8.615850e-47
Msa0579080	Msa0758780	-0.841805	3.803451e-58	-8.615850e-47
Msa0579080	Msa0758810	-0.845878	3.085803e-59	-8.615850e-47
Msa0579080	Msa0765960	-0.804256	2.356712e-49	-8.615850e-47
Msa0579080	Msa0774060	0.827704	1.350368e-54	-8.615850e-47
Msa0579080	Msa0776640	0.807647	4.563945e-50	-8.615850e-47
Msa0579080	Msa0779450	-0.838238	3.238420e-57	-8.615850e-47
Msa0579080	Msa0795750	0.854419	1.246236e-61	-8.615850e-47
Msa0579080	Msa0800480	0.820260	7.533405e-53	-8.615850e-47
Msa0579080	Msa0805390	0.843038	1.791647e-58	-8.615850e-47
Msa0579080	Msa0811690	0.866877	2.067110e-65	-8.615850e-47
Msa0579080	Msa0812020	-0.801528	8.627634e-49	-8.615850e-47
Msa0579080	Msa0823480	-0.816539	5.250246e-52	-8.615850e-47
Msa0579080	Msa0828960	0.813357	2.666225e-51	-8.615850e-47
Msa0579080	Msa0838620	-0.829903	3.967473e-55	-8.615850e-47
Msa0579080	Msa0842140	0.804696	1.908387e-49	-8.615850e-47
Msa0579080	Msa0851850	0.891694	3.143737e-74	-8.615850e-47
Msa0579080	Msa0862480	-0.860395	2.127621e-63	-8.615850e-47
Msa0579080	Msa0865420	0.825232	5.243552e-54	-8.615850e-47
Msa0579080	Msa0909260	0.819319	1.235973e-52	-8.615850e-47
Msa0579080	Msa0926240	0.811477	6.865930e-51	-8.615850e-47
Msa0579080	Msa0930770	0.821040	4.987591e-53	-8.615850e-47
Msa0579080	Msa0958830	0.819454	1.151620e-52	-8.615850e-47
Msa0579080	Msa0964020	0.814859	1.243291e-51	-8.615850e-47
Msa0579080	Msa0965800	0.800997	1.108339e-48	-8.615850e-47
Msa0579080	Msa0967780	0.805681	1.186980e-49	-8.615850e-47
Msa0579080	Msa0970100	0.811888	5.589786e-51	-8.615850e-47
Msa0579080	Msa0981670	0.818446	1.952479e-52	-8.615850e-47
Msa0579080	Msa0982730	0.851871	6.689071e-61	-8.615850e-47
Msa0579080	Msa1002970	-0.821001	5.091914e-53	-8.615850e-47
Msa0579080	Msa1014550	-0.808754	2.651332e-50	-8.615850e-47
Msa0579080	Msa1015360	0.820841	5.542095e-53	-8.615850e-47
Msa0579080	Msa1022420	0.829587	4.735059e-55	-8.615850e-47
Msa0579080	Msa1032470	0.818770	1.647694e-52	-8.615850e-47
Msa0579080	Msa1039440	-0.835806	1.354228e-56	-8.615850e-47
Msa0579080	Msa1041060	0.813879	2.047047e-51	-8.615850e-47
Msa0579080	Msa1044250	0.832711	8.088097e-56	-8.615850e-47
Msa0579080	Msa1057620	-0.804680	1.923465e-49	-8.615850e-47
Msa0579080	Msa1082410	0.819922	9.006150e-53	-8.615850e-47
Msa0579080	Msa1083700	0.807245	5.553532e-50	-8.615850e-47
Msa0579080	Msa1088400	-0.830303	3.168030e-55	-8.615850e-47
Msa0579080	Msa1089220	0.818236	2.177381e-52	-8.615850e-47
Msa0579080	Msa1094810	0.819913	9.047299e-53	-8.615850e-47
Msa0579080	Msa1114690	0.824125	9.563663e-54	-8.615850e-47
Msa0579080	Msa1115600	0.810903	9.143793e-51	-8.615850e-47
Msa0579080	Msa1128810	0.818879	1.556834e-52	-8.615850e-47
Msa0579080	Msa1133750	0.827886	1.220872e-54	-8.615850e-47
Msa0579080	Msa1146980	0.833332	5.666682e-56	-8.615850e-47
Msa0579080	Msa1147650	0.820705	5.956093e-53	-8.615850e-47
Msa0579080	Msa1147700	0.809416	1.912418e-50	-8.615850e-47
Msa0579080	Msa1154320	0.808678	2.751817e-50	-8.615850e-47
Msa0579080	Msa1155990	0.824540	7.636364e-54	-8.615850e-47
Msa0579080	Msa1165460	0.842964	1.874610e-58	-8.615850e-47
Msa0579080	Msa1184680	0.865898	4.227502e-65	-8.615850e-47
Msa0579080	Msa1190770	0.863369	2.615534e-64	-8.615850e-47
Msa0579080	Msa1197720	0.875917	2.110288e-68	-8.615850e-47
Msa0579080	Msa1201170	0.804469	2.127866e-49	-8.615850e-47
Msa0579080	Msa1205270	-0.804411	2.187942e-49	-8.615850e-47
Msa0579080	Msa1207920	-0.821122	4.775659e-53	-8.615850e-47
Msa0579080	Msa1210040	0.833767	4.413867e-56	-8.615850e-47
Msa0579080	Msa1212830	0.808037	3.769934e-50	-8.615850e-47
Msa0579080	Msa1213040	0.818377	2.022998e-52	-8.615850e-47
Msa0579080	Msa1219930	0.845370	4.236554e-59	-8.615850e-47
Msa0579080	Msa1220580	0.829415	5.213141e-55	-8.615850e-47
Msa0579080	Msa1231560	0.815230	1.028274e-51	-8.615850e-47
Msa0579080	Msa1251410	0.884700	1.532068e-71	-8.615850e-47
Msa0579080	Msa1259160	0.833953	3.964573e-56	-8.615850e-47
Msa0579080	Msa1260220	0.843960	1.016157e-58	-8.615850e-47
Msa0579080	Msa1274260	0.813400	2.609114e-51	-8.615850e-47
Msa0579080	Msa1277110	0.811444	6.979588e-51	-8.615850e-47
Msa0579080	Msa1280080	0.802911	4.480215e-49	-8.615850e-47
Msa0579080	Msa1283930	0.801384	9.236467e-49	-8.615850e-47
Msa0579080	Msa1284020	0.809711	1.653487e-50	-8.615850e-47
Msa0579080	Msa1299650	0.840124	1.050586e-57	-8.615850e-47
Msa0579080	Msa1322960	0.806873	6.657845e-50	-8.615850e-47
Msa0579080	Msa1322980	0.814778	1.295295e-51	-8.615850e-47
Msa0579080	Msa1323070	0.850665	1.465666e-60	-8.615850e-47
Msa0579080	Msa1331570	-0.835910	1.274070e-56	-8.615850e-47
Msa0579080	Msa1334560	0.814712	1.339518e-51	-8.615850e-47
Msa0579080	Msa1347390	0.822422	2.389331e-53	-8.615850e-47
Msa0579080	Msa1349690	0.807047	6.115608e-50	-8.615850e-47
Msa0579080	Msa1351990	0.809840	1.550877e-50	-8.615850e-47
Msa0579080	Msa1352580	0.814779	1.294656e-51	-8.615850e-47
Msa0579080	Msa1352600	-0.827812	1.272150e-54	-8.615850e-47
Msa0579080	Msa1361980	0.807965	3.905081e-50	-8.615850e-47
Msa0579080	Msa1363010	0.824344	8.495191e-54	-8.615850e-47
Msa0579080	Msa1363280	-0.838111	3.492108e-57	-8.615850e-47
Msa0579080	Msa1368390	0.821757	3.407902e-53	-8.615850e-47
Msa0579080	Msa1379940	0.815189	1.050382e-51	-8.615850e-47
Msa0579080	Msa1380040	0.814836	1.257762e-51	-8.615850e-47
Msa0579080	Msa1381260	0.824308	8.658924e-54	-8.615850e-47
Msa0579080	Msa1384700	0.835827	1.337414e-56	-8.615850e-47
Msa0579080	Msa1387570	0.819228	1.296930e-52	-8.615850e-47
Msa0579080	Msa1391500	0.835142	1.993098e-56	-8.615850e-47
Msa0579080	Msa1392740	0.804047	2.605031e-49	-8.615850e-47
Msa0579080	Msa1396200	-0.859146	5.060229e-63	-8.615850e-47
Msa0579080	Msa1402010	0.805900	1.067682e-49	-8.615850e-47
Msa0579080	Msa1407840	0.809434	1.895827e-50	-8.615850e-47
Msa0579080	Msa1422860	0.864495	1.167437e-64	-8.615850e-47
Msa0579080	Msa1428230	-0.855384	6.540886e-62	-8.615850e-47
Msa0579080	Msa1433360	0.804112	2.525716e-49	-8.615850e-47
Msa0579080	Msa1434300	0.824725	6.908575e-54	-8.615850e-47
Msa0579080	Msa1437810	0.813618	2.336574e-51	-8.615850e-47
Msa0579080	Msa1439250	0.832729	8.004490e-56	-8.615850e-47
Msa0579080	Msa1439930	0.806827	6.808766e-50	-8.615850e-47
Msa0579080	Msa1454500	0.810234	1.275378e-50	-8.615850e-47
Msa0579080	Msa1457770	0.816913	4.328149e-52	-8.615850e-47
Msa0579080	Msa1457890	0.820045	8.439471e-53	-8.615850e-47
Msa0579080	Msa1461770	0.806218	9.153629e-50	-8.615850e-47
Msa0579080	Msa1462780	0.825326	4.982739e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579080	MtrunA17_Chr4g0043711	98.065	155	3	0	1	155	1	155	1.03e-112	316
Msa0579080	MtrunA17_Chr5g0400431	66.418	134	45	0	22	155	33	166	2.25e-66	199
Msa0579080	MtrunA17_Chr7g0260591	77.358	53	10	1	53	103	3	55	5.48e-20	78.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0579080	AT2G35120.1	78.205	156	33	1	1	155	1	156	2.81e-88	254
Msa0579080	AT1G32470.1	58.084	167	57	2	1	155	1	166	8.19e-63	191
Msa0579080	AT2G35370.1	65.441	136	47	0	20	155	30	165	1.88e-62	189

Find 58 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACATCAACTCTCCTGTTTC+AGG	0.209182	4_1:-83747562	Msa0579080:CDS
TTCACTGCCGTTCCCACTTC+TGG	0.241034	4_1:+83747631	None:intergenic
AGAAGTTCTATGAATTTAAT+AGG	0.244254	4_1:-83746948	Msa0579080:three_prime_UTR
AACTCAAGCCCCTATGAAAA+TGG	0.268193	4_1:-83747370	Msa0579080:CDS
AGATGGCTTGCAGGCAGTTA+TGG	0.326829	4_1:-83749056	Msa0579080:CDS
AGTGAAGAGTGGTAGGGTTA+AGG	0.337032	4_1:+83749191	Msa0579090:intron
TGATCATGCCCAAGATCATT+TGG	0.340864	4_1:-83747677	Msa0579080:CDS
CATCATGCAACTCATTTACT+AGG	0.362088	4_1:+83746822	None:intergenic
TGGTATAGATGATGTCAATT+TGG	0.362666	4_1:-83747212	Msa0579080:three_prime_UTR
GTGAAACAAGGAGATGGTTT+TGG	0.366878	4_1:-83747613	Msa0579080:CDS
ATCTTCTTCTTCACAGAACT+TGG	0.368009	4_1:+83747279	None:intergenic
CAACATCACCCAAATGATCT+TGG	0.387609	4_1:+83747668	None:intergenic
GATGGCTTGCAGGCAGTTAT+GGG	0.405390	4_1:-83749055	Msa0579080:CDS
AGTGGTAGGGTTAAGGAAGT+TGG	0.419936	4_1:+83749198	Msa0579090:intron
GAGAGAGAGTGAAGAGTGGT+AGG	0.424407	4_1:+83749184	Msa0579090:intron
TGGCGAACTTGACAAATTGA+TGG	0.434808	4_1:-83747317	Msa0579080:CDS
GCTCAGCAACTCTCCTGCTT+TGG	0.435121	4_1:-83747515	Msa0579080:intron
CCTGAGGTATGATGCGGCTC+TGG	0.441316	4_1:+83749029	Msa0579090:intron
ATTCATTCATTCAGTGTAAG+TGG	0.444370	4_1:-83749110	Msa0579080:five_prime_UTR
TGAATGTCGTATGACAAAAC+TGG	0.478972	4_1:+83747009	None:intergenic
GATCATGCCCAAGATCATTT+GGG	0.482133	4_1:-83747676	Msa0579080:CDS
TGGGAAGTACTGAAAGATAT+CGG	0.488163	4_1:+83747236	None:intergenic
GCAATAAAACTCACCAAAGC+AGG	0.490891	4_1:+83747502	None:intergenic
CATGAATGGGTGAAAGTTGA+CGG	0.492157	4_1:-83747724	Msa0579080:CDS
AACATCACCCAAATGATCTT+GGG	0.497081	4_1:+83747669	None:intergenic
CCAGAGCCGCATCATACCTC+AGG	0.521213	4_1:-83749029	Msa0579080:CDS
AGTATGCTGATTCTCATGAA+TGG	0.523325	4_1:-83747738	Msa0579080:CDS
TGCGCTAGCTTCTGATGCAG+AGG	0.534256	4_1:-83747131	Msa0579080:three_prime_UTR
TTGACATCATCTATACCAAT+GGG	0.535199	4_1:+83747217	None:intergenic
CAAGCCCCTATGAAAATGGA+TGG	0.537218	4_1:-83747366	Msa0579080:CDS
ATCATGCAACTCATTTACTA+GGG	0.541363	4_1:+83746823	None:intergenic
TATCTTTCAGTACTTCCCAT+TGG	0.548271	4_1:-83747232	Msa0579080:three_prime_UTR
GCGCTAGCTTCTGATGCAGA+GGG	0.548373	4_1:-83747130	Msa0579080:three_prime_UTR
TTCCATCTTAGTTGAAAACA+AGG	0.549310	4_1:+83746972	None:intergenic
CTGAGAGAGAGAGTGAAGAG+TGG	0.551470	4_1:+83749180	Msa0579090:intron
GTATGCTGATTCTCATGAAT+GGG	0.551627	4_1:-83747737	Msa0579080:CDS
AGAGAGAGTGAAGAGTGGTA+GGG	0.552288	4_1:+83749185	Msa0579090:intron
ATTGACATCATCTATACCAA+TGG	0.555452	4_1:+83747216	None:intergenic
GACGGAAAATCTGCAACCAT+TGG	0.558598	4_1:-83747706	Msa0579080:CDS
TCGGCAAGACTATCAATGAC+TGG	0.570070	4_1:+83747255	None:intergenic
ATTGCTGTGGTTGGTGACAA+AGG	0.572500	4_1:+83749154	Msa0579090:intron
TTTCACAGAACCTTCTCTAA+CGG	0.580128	4_1:-83748997	Msa0579080:intron
TTGCTGTGGTTGGTGACAAA+GGG	0.582432	4_1:+83749155	Msa0579090:intron
TCCATCTTAGTTGAAAACAA+GGG	0.618905	4_1:+83746973	None:intergenic
TGAATGAATACCGTTAGAGA+AGG	0.619094	4_1:+83748987	None:intergenic
TGGTGCAGTTGAAAGTGTGA+AGG	0.619953	4_1:-83747593	Msa0579080:CDS
TGAATTGCCAGAAGTGGGAA+CGG	0.630383	4_1:-83747638	Msa0579080:CDS
GTGGGAACGGCAGTGAAACA+AGG	0.631106	4_1:-83747625	Msa0579080:CDS
ACGGCAGTGAAACAAGGAGA+TGG	0.634473	4_1:-83747619	Msa0579080:CDS
GGCATGATCAGTTATGCCAA+TGG	0.640158	4_1:+83747690	None:intergenic
CATTCATTCAGTGTAAGTGG+TGG	0.640220	4_1:-83749107	Msa0579080:five_prime_UTR
GTATGTTGAATTGCCAGAAG+TGG	0.646780	4_1:-83747644	Msa0579080:CDS
TGTGAAAGACAGAGATCCTG+AGG	0.655630	4_1:+83749013	Msa0579090:CDS
TATGTTGAATTGCCAGAAGT+GGG	0.663199	4_1:-83747643	Msa0579080:CDS
TCATGCAACTCATTTACTAG+GGG	0.688705	4_1:+83746824	None:intergenic
AGAGATCCTGAGGTATGATG+CGG	0.690860	4_1:+83749023	Msa0579090:intron
AAAGTTGAGATGAGTGACAG+TGG	0.702478	4_1:-83747337	Msa0579080:CDS
CATGCAACTCATTTACTAGG+GGG	0.728223	4_1:+83746825	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAAAGTTAATTATGAATA+AGG	+	chr4_1:83748534-83748553	None:intergenic	10.0%
!!	ATAAAAGTTAATTATGAATA+AGG	+	chr4_1:83748534-83748553	None:intergenic	10.0%
!!	TAATAATAAAATAAAAAGCG+AGG	+	chr4_1:83747129-83747148	None:intergenic	15.0%
!!	TTGTTAACAAAAAAACAAAA+TGG	+	chr4_1:83747359-83747378	None:intergenic	15.0%
!!!	AGATTTTATTGAGATATTAA+CGG	+	chr4_1:83747828-83747847	None:intergenic	15.0%
!!!	AACCAAAATTTATAATTTGT+AGG	-	chr4_1:83747976-83747995	Msa0579080:intron	15.0%
!!!	ATCCTACAAATTATAAATTT+TGG	+	chr4_1:83747981-83748000	None:intergenic	15.0%
!!!	AAAATTTATAATTTGTAGGA+TGG	-	chr4_1:83747980-83747999	Msa0579080:intron	15.0%
!!	TTAAAATTCAATATGCAAAT+TGG	+	chr4_1:83748026-83748045	None:intergenic	15.0%
!!!	TTTTAATATCTTGAAAGTTT+TGG	-	chr4_1:83748040-83748059	Msa0579080:intron	15.0%
!!	TAATAATAAAATAAAAAGCG+AGG	+	chr4_1:83747129-83747148	None:intergenic	15.0%
!!	TTGTTAACAAAAAAACAAAA+TGG	+	chr4_1:83747359-83747378	None:intergenic	15.0%
!!!	AGATTTTATTGAGATATTAA+CGG	+	chr4_1:83747828-83747847	None:intergenic	15.0%
!!!	AACCAAAATTTATAATTTGT+AGG	-	chr4_1:83747976-83747995	Msa0579080:intron	15.0%
!!!	ATCCTACAAATTATAAATTT+TGG	+	chr4_1:83747981-83748000	None:intergenic	15.0%
!!!	AAAATTTATAATTTGTAGGA+TGG	-	chr4_1:83747980-83747999	Msa0579080:intron	15.0%
!!	TTAAAATTCAATATGCAAAT+TGG	+	chr4_1:83748026-83748045	None:intergenic	15.0%
!!!	TTTTAATATCTTGAAAGTTT+TGG	-	chr4_1:83748040-83748059	Msa0579080:intron	15.0%
!!	AGATCAAGTTCAAAATAAAT+TGG	+	chr4_1:83747227-83747246	None:intergenic	20.0%
!!	ATATGTAAGTAACATATACT+AGG	-	chr4_1:83747378-83747397	Msa0579080:intron	20.0%
!!	AAAAATGTAACAAACAACAT+AGG	+	chr4_1:83747457-83747476	None:intergenic	20.0%
!!!	AAATGTTTGAATAGCTTTAT+AGG	+	chr4_1:83747727-83747746	None:intergenic	20.0%
!!!	ATTTTGTTCTAACTATTATC+TGG	-	chr4_1:83747860-83747879	Msa0579080:intron	20.0%
!!	AGAAGTTCTATGAATTTAAT+AGG	-	chr4_1:83749063-83749082	Msa0579080:exon	20.0%
!!	AAAGAAGAAAAAAACTAGTA+GGG	+	chr4_1:83749129-83749148	Msa0579090:intron	20.0%
!!	AAAAGAAGAAAAAAACTAGT+AGG	+	chr4_1:83749130-83749149	Msa0579090:intron	20.0%
!!	AGATCAAGTTCAAAATAAAT+TGG	+	chr4_1:83747227-83747246	None:intergenic	20.0%
!!	ATATGTAAGTAACATATACT+AGG	-	chr4_1:83747378-83747397	Msa0579080:intron	20.0%
!!	AAAAATGTAACAAACAACAT+AGG	+	chr4_1:83747457-83747476	None:intergenic	20.0%
!!!	AAATGTTTGAATAGCTTTAT+AGG	+	chr4_1:83747727-83747746	None:intergenic	20.0%
!!!	ATTTTGTTCTAACTATTATC+TGG	-	chr4_1:83747860-83747879	Msa0579080:intron	20.0%
!!	AGAAGTTCTATGAATTTAAT+AGG	-	chr4_1:83749063-83749082	Msa0579080:exon	20.0%
!!	AAAGAAGAAAAAAACTAGTA+GGG	+	chr4_1:83749129-83749148	Msa0579090:intron	20.0%
!!	AAAAGAAGAAAAAAACTAGT+AGG	+	chr4_1:83749130-83749149	Msa0579090:intron	20.0%
!	AACCACAGCAATATAAAAAA+GGG	-	chr4_1:83746868-83746887	Msa0579080:three_prime_UTR	25.0%
!	TCAAGTTCAAAATAAATTGG+AGG	+	chr4_1:83747224-83747243	None:intergenic	25.0%
!!	TTTTAGTGAATAGTGACAAA+AGG	-	chr4_1:83747327-83747346	Msa0579080:CDS	25.0%
!!	AGAATATTCCATTTCCATTT+TGG	+	chr4_1:83747411-83747430	None:intergenic	25.0%
!!!	AAGTTCGTTTTTGCTTTTAA+AGG	-	chr4_1:83747576-83747595	Msa0579080:CDS	25.0%
!	ATAACTCAGTCAAAAGAAAT+TGG	+	chr4_1:83747691-83747710	None:intergenic	25.0%
!!!	GAATAGCTTTATAGGTAAAT+TGG	+	chr4_1:83747719-83747738	None:intergenic	25.0%
!!	TAACGGTTTAATTGATTTCA+AGG	+	chr4_1:83747811-83747830	None:intergenic	25.0%
!	TATTATCTGGTACATCATAT+TGG	-	chr4_1:83747873-83747892	Msa0579080:intron	25.0%
!	TTAAAACTTAAAGTGAACGA+TGG	-	chr4_1:83747907-83747926	Msa0579080:intron	25.0%
!	TAAAACTTAAAGTGAACGAT+GGG	-	chr4_1:83747908-83747927	Msa0579080:intron	25.0%
!	CTTACAAATGAACAATGATA+TGG	+	chr4_1:83747939-83747958	None:intergenic	25.0%
!	TAGGAAAACATAAAAACACT+TGG	+	chr4_1:83748603-83748622	None:intergenic	25.0%
!!	ATTATCCATCCATTTTCATA+GGG	+	chr4_1:83748653-83748672	None:intergenic	25.0%
!!	AATTATCCATCCATTTTCAT+AGG	+	chr4_1:83748654-83748673	None:intergenic	25.0%
!!	AAAAATGAGATTGATAACCT+GGG	-	chr4_1:83748929-83748948	Msa0579080:intron	25.0%
!!	TTTTTATTATCAAACTTCCC+AGG	+	chr4_1:83748949-83748968	None:intergenic	25.0%
!	AACCACAGCAATATAAAAAA+GGG	-	chr4_1:83746868-83746887	Msa0579080:three_prime_UTR	25.0%
!	TCAAGTTCAAAATAAATTGG+AGG	+	chr4_1:83747224-83747243	None:intergenic	25.0%
!!	TTTTAGTGAATAGTGACAAA+AGG	-	chr4_1:83747327-83747346	Msa0579080:CDS	25.0%
!!	AGAATATTCCATTTCCATTT+TGG	+	chr4_1:83747411-83747430	None:intergenic	25.0%
!!!	AAGTTCGTTTTTGCTTTTAA+AGG	-	chr4_1:83747576-83747595	Msa0579080:CDS	25.0%
!	ATAACTCAGTCAAAAGAAAT+TGG	+	chr4_1:83747691-83747710	None:intergenic	25.0%
!!!	GAATAGCTTTATAGGTAAAT+TGG	+	chr4_1:83747719-83747738	None:intergenic	25.0%
!!	TAACGGTTTAATTGATTTCA+AGG	+	chr4_1:83747811-83747830	None:intergenic	25.0%
!	TATTATCTGGTACATCATAT+TGG	-	chr4_1:83747873-83747892	Msa0579080:intron	25.0%
!	TTAAAACTTAAAGTGAACGA+TGG	-	chr4_1:83747907-83747926	Msa0579080:intron	25.0%
!	TAAAACTTAAAGTGAACGAT+GGG	-	chr4_1:83747908-83747927	Msa0579080:intron	25.0%
!	CTTACAAATGAACAATGATA+TGG	+	chr4_1:83747939-83747958	None:intergenic	25.0%
!	TAGGAAAACATAAAAACACT+TGG	+	chr4_1:83748603-83748622	None:intergenic	25.0%
!!	ATTATCCATCCATTTTCATA+GGG	+	chr4_1:83748653-83748672	None:intergenic	25.0%
!!	AATTATCCATCCATTTTCAT+AGG	+	chr4_1:83748654-83748673	None:intergenic	25.0%
!!	AAAAATGAGATTGATAACCT+GGG	-	chr4_1:83748929-83748948	Msa0579080:intron	25.0%
!!	TTTTTATTATCAAACTTCCC+AGG	+	chr4_1:83748949-83748968	None:intergenic	25.0%
!!!	CTTTTTTATATTGCTGTGGT+TGG	+	chr4_1:83746869-83746888	None:intergenic	30.0%
	CAACCACAGCAATATAAAAA+AGG	-	chr4_1:83746867-83746886	Msa0579080:three_prime_UTR	30.0%
	ATTCATTCATTCAGTGTAAG+TGG	-	chr4_1:83746901-83746920	Msa0579080:three_prime_UTR	30.0%
	ATTGCCTTTATATACGTTAG+TGG	-	chr4_1:83747164-83747183	Msa0579080:three_prime_UTR	30.0%
	TTGCCTTTATATACGTTAGT+GGG	-	chr4_1:83747165-83747184	Msa0579080:three_prime_UTR	30.0%
!	TTTTGAACTTGATCTGTATG+TGG	-	chr4_1:83747232-83747251	Msa0579080:three_prime_UTR	30.0%
	AATTGAAAGAATAGATCGTC+CGG	+	chr4_1:83747309-83747328	None:intergenic	30.0%
	TACTAGGCTAAATTCCAAAA+TGG	-	chr4_1:83747394-83747413	Msa0579080:intron	30.0%
	GCTAAATTCCAAAATGGAAA+TGG	-	chr4_1:83747400-83747419	Msa0579080:intron	30.0%
	GTGCATATTTCGAAATTAAG+TGG	-	chr4_1:83747534-83747553	Msa0579080:CDS	30.0%
!!	AATTTAGCTTGTTAGCACTT+TGG	-	chr4_1:83747613-83747632	Msa0579080:CDS	30.0%
!!	ATTTAGCTTGTTAGCACTTT+GGG	-	chr4_1:83747614-83747633	Msa0579080:CDS	30.0%
!!	TAACAAACTGTTGGTTTGTT+TGG	-	chr4_1:83747643-83747662	Msa0579080:CDS	30.0%
	AATAATCCAAATTACTCTCG+AGG	-	chr4_1:83747750-83747769	Msa0579080:CDS	30.0%
!	CAATATGCTACTTGTTCAAT+TGG	+	chr4_1:83748153-83748172	None:intergenic	30.0%
	CAATTGAACAAGTAGCATAT+TGG	-	chr4_1:83748151-83748170	Msa0579080:intron	30.0%
!	ATTGAAACCAACATTTTGCA+AGG	-	chr4_1:83748201-83748220	Msa0579080:intron	30.0%
!!	TTTCCTATTTTTCTTCGTGT+AGG	-	chr4_1:83748616-83748635	Msa0579080:intron	30.0%
!	TTATCCATCCATTTTCATAG+GGG	+	chr4_1:83748652-83748671	None:intergenic	30.0%
	TTGACATCATCTATACCAAT+GGG	+	chr4_1:83748797-83748816	None:intergenic	30.0%
	ATTGACATCATCTATACCAA+TGG	+	chr4_1:83748798-83748817	None:intergenic	30.0%
	TGGTATAGATGATGTCAATT+TGG	-	chr4_1:83748799-83748818	Msa0579080:intron	30.0%
!!	TCTCATTTTTCCATTGCAAA+GGG	+	chr4_1:83748919-83748938	None:intergenic	30.0%
!!	ATCTCATTTTTCCATTGCAA+AGG	+	chr4_1:83748920-83748939	None:intergenic	30.0%
!	GAAAAATGAGATTGATAACC+TGG	-	chr4_1:83748928-83748947	Msa0579080:intron	30.0%
	TCCATCTTAGTTGAAAACAA+GGG	+	chr4_1:83749041-83749060	Msa0579090:intron	30.0%
	TTCCATCTTAGTTGAAAACA+AGG	+	chr4_1:83749042-83749061	Msa0579090:intron	30.0%
!!	AAAAACTAGTAGGGTTTTAG+TGG	+	chr4_1:83749120-83749139	Msa0579090:intron	30.0%
	ATCATGCAACTCATTTACTA+GGG	+	chr4_1:83749191-83749210	Msa0579090:intron	30.0%
!!!	CTTTTTTATATTGCTGTGGT+TGG	+	chr4_1:83746869-83746888	None:intergenic	30.0%
	CAACCACAGCAATATAAAAA+AGG	-	chr4_1:83746867-83746886	Msa0579080:three_prime_UTR	30.0%
	ATTCATTCATTCAGTGTAAG+TGG	-	chr4_1:83746901-83746920	Msa0579080:three_prime_UTR	30.0%
	ATTGCCTTTATATACGTTAG+TGG	-	chr4_1:83747164-83747183	Msa0579080:three_prime_UTR	30.0%
	TTGCCTTTATATACGTTAGT+GGG	-	chr4_1:83747165-83747184	Msa0579080:three_prime_UTR	30.0%
!	TTTTGAACTTGATCTGTATG+TGG	-	chr4_1:83747232-83747251	Msa0579080:three_prime_UTR	30.0%
	AATTGAAAGAATAGATCGTC+CGG	+	chr4_1:83747309-83747328	None:intergenic	30.0%
	TACTAGGCTAAATTCCAAAA+TGG	-	chr4_1:83747394-83747413	Msa0579080:intron	30.0%
	GCTAAATTCCAAAATGGAAA+TGG	-	chr4_1:83747400-83747419	Msa0579080:intron	30.0%
	GTGCATATTTCGAAATTAAG+TGG	-	chr4_1:83747534-83747553	Msa0579080:CDS	30.0%
!!	AATTTAGCTTGTTAGCACTT+TGG	-	chr4_1:83747613-83747632	Msa0579080:CDS	30.0%
!!	ATTTAGCTTGTTAGCACTTT+GGG	-	chr4_1:83747614-83747633	Msa0579080:CDS	30.0%
!!	TAACAAACTGTTGGTTTGTT+TGG	-	chr4_1:83747643-83747662	Msa0579080:CDS	30.0%
	AATAATCCAAATTACTCTCG+AGG	-	chr4_1:83747750-83747769	Msa0579080:CDS	30.0%
!	CAATATGCTACTTGTTCAAT+TGG	+	chr4_1:83748153-83748172	None:intergenic	30.0%
	CAATTGAACAAGTAGCATAT+TGG	-	chr4_1:83748151-83748170	Msa0579080:intron	30.0%
!	ATTGAAACCAACATTTTGCA+AGG	-	chr4_1:83748201-83748220	Msa0579080:intron	30.0%
!!	TTTCCTATTTTTCTTCGTGT+AGG	-	chr4_1:83748616-83748635	Msa0579080:intron	30.0%
!	TTATCCATCCATTTTCATAG+GGG	+	chr4_1:83748652-83748671	None:intergenic	30.0%
	TTGACATCATCTATACCAAT+GGG	+	chr4_1:83748797-83748816	None:intergenic	30.0%
	ATTGACATCATCTATACCAA+TGG	+	chr4_1:83748798-83748817	None:intergenic	30.0%
	TGGTATAGATGATGTCAATT+TGG	-	chr4_1:83748799-83748818	Msa0579080:intron	30.0%
!!	TCTCATTTTTCCATTGCAAA+GGG	+	chr4_1:83748919-83748938	None:intergenic	30.0%
!!	ATCTCATTTTTCCATTGCAA+AGG	+	chr4_1:83748920-83748939	None:intergenic	30.0%
!	GAAAAATGAGATTGATAACC+TGG	-	chr4_1:83748928-83748947	Msa0579080:intron	30.0%
	TCCATCTTAGTTGAAAACAA+GGG	+	chr4_1:83749041-83749060	Msa0579090:intron	30.0%
	TTCCATCTTAGTTGAAAACA+AGG	+	chr4_1:83749042-83749061	Msa0579090:intron	30.0%
!!	AAAAACTAGTAGGGTTTTAG+TGG	+	chr4_1:83749120-83749139	Msa0579090:intron	30.0%
	ATCATGCAACTCATTTACTA+GGG	+	chr4_1:83749191-83749210	Msa0579090:intron	30.0%
!!!	TGCCCTTTTTTATATTGCTG+TGG	+	chr4_1:83746873-83746892	None:intergenic	35.0%
	TTTCACAGAACCTTCTCTAA+CGG	-	chr4_1:83747014-83747033	Msa0579080:three_prime_UTR	35.0%
	TGAATGAATACCGTTAGAGA+AGG	+	chr4_1:83747027-83747046	None:intergenic	35.0%
	CATGTTGTTGATCCAATATC+TGG	-	chr4_1:83747088-83747107	Msa0579080:three_prime_UTR	35.0%
!	TTGATCCAATATCTGGAATC+TGG	-	chr4_1:83747095-83747114	Msa0579080:three_prime_UTR	35.0%
	AAGATCCAGATTCCAGATAT+TGG	+	chr4_1:83747103-83747122	None:intergenic	35.0%
	CTTCCCACTAACGTATATAA+AGG	+	chr4_1:83747171-83747190	None:intergenic	35.0%
	CTTTATATACGTTAGTGGGA+AGG	-	chr4_1:83747169-83747188	Msa0579080:three_prime_UTR	35.0%
	ATAAATTGGAGGTGACTGAA+TGG	+	chr4_1:83747213-83747232	None:intergenic	35.0%
!!	TTTAGCTTGTTAGCACTTTG+GGG	-	chr4_1:83747615-83747634	Msa0579080:CDS	35.0%
	ATGTTTCCTCGAGAGTAATT+TGG	+	chr4_1:83747759-83747778	None:intergenic	35.0%
!	CGGTTTAATTGATTTCAAGG+AGG	+	chr4_1:83747808-83747827	None:intergenic	35.0%
	CATACAACCTTGCAAAATGT+TGG	+	chr4_1:83748211-83748230	None:intergenic	35.0%
!!	AGTATGCTGATTCTCATGAA+TGG	-	chr4_1:83748273-83748292	Msa0579080:intron	35.0%
!!	GTATGCTGATTCTCATGAAT+GGG	-	chr4_1:83748274-83748293	Msa0579080:intron	35.0%
	AACATCACCCAAATGATCTT+GGG	+	chr4_1:83748345-83748364	None:intergenic	35.0%
	TATGTTGAATTGCCAGAAGT+GGG	-	chr4_1:83748368-83748387	Msa0579080:intron	35.0%
!!	TCAATCACTTTTCCTGAAAC+AGG	+	chr4_1:83748464-83748483	None:intergenic	35.0%
	TGACCTACACGAAGAAAAAT+AGG	+	chr4_1:83748622-83748641	None:intergenic	35.0%
	ATCTTCTTCTTCACAGAACT+TGG	+	chr4_1:83748735-83748754	None:intergenic	35.0%
!!	TGGGAAGTACTGAAAGATAT+CGG	+	chr4_1:83748778-83748797	None:intergenic	35.0%
	TATCTTTCAGTACTTCCCAT+TGG	-	chr4_1:83748779-83748798	Msa0579080:intron	35.0%
!!	TCATTTTTCCATTGCAAAGG+GGG	+	chr4_1:83748917-83748936	None:intergenic	35.0%
!!	CTCATTTTTCCATTGCAAAG+GGG	+	chr4_1:83748918-83748937	None:intergenic	35.0%
	TGAATGTCGTATGACAAAAC+TGG	+	chr4_1:83749005-83749024	Msa0579090:CDS	35.0%
	TCATGCAACTCATTTACTAG+GGG	+	chr4_1:83749190-83749209	Msa0579090:intron	35.0%
	CATCATGCAACTCATTTACT+AGG	+	chr4_1:83749192-83749211	Msa0579090:intron	35.0%
!!!	TGCCCTTTTTTATATTGCTG+TGG	+	chr4_1:83746873-83746892	None:intergenic	35.0%
	TTTCACAGAACCTTCTCTAA+CGG	-	chr4_1:83747014-83747033	Msa0579080:three_prime_UTR	35.0%
	TGAATGAATACCGTTAGAGA+AGG	+	chr4_1:83747027-83747046	None:intergenic	35.0%
	CATGTTGTTGATCCAATATC+TGG	-	chr4_1:83747088-83747107	Msa0579080:three_prime_UTR	35.0%
!	TTGATCCAATATCTGGAATC+TGG	-	chr4_1:83747095-83747114	Msa0579080:three_prime_UTR	35.0%
	AAGATCCAGATTCCAGATAT+TGG	+	chr4_1:83747103-83747122	None:intergenic	35.0%
	CTTCCCACTAACGTATATAA+AGG	+	chr4_1:83747171-83747190	None:intergenic	35.0%
	CTTTATATACGTTAGTGGGA+AGG	-	chr4_1:83747169-83747188	Msa0579080:three_prime_UTR	35.0%
	ATAAATTGGAGGTGACTGAA+TGG	+	chr4_1:83747213-83747232	None:intergenic	35.0%
!!	TTTAGCTTGTTAGCACTTTG+GGG	-	chr4_1:83747615-83747634	Msa0579080:CDS	35.0%
	ATGTTTCCTCGAGAGTAATT+TGG	+	chr4_1:83747759-83747778	None:intergenic	35.0%
!	CGGTTTAATTGATTTCAAGG+AGG	+	chr4_1:83747808-83747827	None:intergenic	35.0%
	CATACAACCTTGCAAAATGT+TGG	+	chr4_1:83748211-83748230	None:intergenic	35.0%
!!	AGTATGCTGATTCTCATGAA+TGG	-	chr4_1:83748273-83748292	Msa0579080:intron	35.0%
!!	GTATGCTGATTCTCATGAAT+GGG	-	chr4_1:83748274-83748293	Msa0579080:intron	35.0%
	AACATCACCCAAATGATCTT+GGG	+	chr4_1:83748345-83748364	None:intergenic	35.0%
	TATGTTGAATTGCCAGAAGT+GGG	-	chr4_1:83748368-83748387	Msa0579080:intron	35.0%
!!	TCAATCACTTTTCCTGAAAC+AGG	+	chr4_1:83748464-83748483	None:intergenic	35.0%
	TGACCTACACGAAGAAAAAT+AGG	+	chr4_1:83748622-83748641	None:intergenic	35.0%
	ATCTTCTTCTTCACAGAACT+TGG	+	chr4_1:83748735-83748754	None:intergenic	35.0%
!!	TGGGAAGTACTGAAAGATAT+CGG	+	chr4_1:83748778-83748797	None:intergenic	35.0%
	TATCTTTCAGTACTTCCCAT+TGG	-	chr4_1:83748779-83748798	Msa0579080:intron	35.0%
!!	TCATTTTTCCATTGCAAAGG+GGG	+	chr4_1:83748917-83748936	None:intergenic	35.0%
!!	CTCATTTTTCCATTGCAAAG+GGG	+	chr4_1:83748918-83748937	None:intergenic	35.0%
	TGAATGTCGTATGACAAAAC+TGG	+	chr4_1:83749005-83749024	Msa0579090:CDS	35.0%
	TCATGCAACTCATTTACTAG+GGG	+	chr4_1:83749190-83749209	Msa0579090:intron	35.0%
	CATCATGCAACTCATTTACT+AGG	+	chr4_1:83749192-83749211	Msa0579090:intron	35.0%
	CATTCATTCAGTGTAAGTGG+TGG	-	chr4_1:83746904-83746923	Msa0579080:three_prime_UTR	40.0%
	TGAATGGTGTAGTGCACTTT+CGG	+	chr4_1:83747197-83747216	None:intergenic	40.0%
!!	CACCAAAAGTTGATATACGG+CGG	+	chr4_1:83747286-83747305	None:intergenic	40.0%
!!	CGGCACCAAAAGTTGATATA+CGG	+	chr4_1:83747289-83747308	None:intergenic	40.0%
!!	CGTATATCAACTTTTGGTGC+CGG	-	chr4_1:83747287-83747306	Msa0579080:CDS	40.0%
!!	TTAGCTTGTTAGCACTTTGG+GGG	-	chr4_1:83747616-83747635	Msa0579080:CDS	40.0%
	GGGGGAAAATAACAAACTGT+TGG	-	chr4_1:83747634-83747653	Msa0579080:CDS	40.0%
	CATGAATGGGTGAAAGTTGA+CGG	-	chr4_1:83748287-83748306	Msa0579080:intron	40.0%
	TGATCATGCCCAAGATCATT+TGG	-	chr4_1:83748334-83748353	Msa0579080:intron	40.0%
	GATCATGCCCAAGATCATTT+GGG	-	chr4_1:83748335-83748354	Msa0579080:intron	40.0%
	CAACATCACCCAAATGATCT+TGG	+	chr4_1:83748346-83748365	None:intergenic	40.0%
	GTATGTTGAATTGCCAGAAG+TGG	-	chr4_1:83748367-83748386	Msa0579080:intron	40.0%
!	GTGAAACAAGGAGATGGTTT+TGG	-	chr4_1:83748398-83748417	Msa0579080:intron	40.0%
	GCAATAAAACTCACCAAAGC+AGG	+	chr4_1:83748512-83748531	None:intergenic	40.0%
	AACTCAAGCCCCTATGAAAA+TGG	-	chr4_1:83748641-83748660	Msa0579080:intron	40.0%
	AAAGTTGAGATGAGTGACAG+TGG	-	chr4_1:83748674-83748693	Msa0579080:intron	40.0%
	TGGCGAACTTGACAAATTGA+TGG	-	chr4_1:83748694-83748713	Msa0579080:intron	40.0%
!	GATATTTTCCCCCTTTGCAA+TGG	-	chr4_1:83748906-83748925	Msa0579080:intron	40.0%
!!!	GCCCTTGTTTTCAACTAAGA+TGG	-	chr4_1:83749037-83749056	Msa0579080:CDS	40.0%
	CATGCAACTCATTTACTAGG+GGG	+	chr4_1:83749189-83749208	Msa0579090:intron	40.0%
	CATTCATTCAGTGTAAGTGG+TGG	-	chr4_1:83746904-83746923	Msa0579080:three_prime_UTR	40.0%
	TGAATGGTGTAGTGCACTTT+CGG	+	chr4_1:83747197-83747216	None:intergenic	40.0%
!!	CACCAAAAGTTGATATACGG+CGG	+	chr4_1:83747286-83747305	None:intergenic	40.0%
!!	CGGCACCAAAAGTTGATATA+CGG	+	chr4_1:83747289-83747308	None:intergenic	40.0%
!!	CGTATATCAACTTTTGGTGC+CGG	-	chr4_1:83747287-83747306	Msa0579080:CDS	40.0%
!!	TTAGCTTGTTAGCACTTTGG+GGG	-	chr4_1:83747616-83747635	Msa0579080:CDS	40.0%
	GGGGGAAAATAACAAACTGT+TGG	-	chr4_1:83747634-83747653	Msa0579080:CDS	40.0%
	CATGAATGGGTGAAAGTTGA+CGG	-	chr4_1:83748287-83748306	Msa0579080:intron	40.0%
	TGATCATGCCCAAGATCATT+TGG	-	chr4_1:83748334-83748353	Msa0579080:intron	40.0%
	GATCATGCCCAAGATCATTT+GGG	-	chr4_1:83748335-83748354	Msa0579080:intron	40.0%
	CAACATCACCCAAATGATCT+TGG	+	chr4_1:83748346-83748365	None:intergenic	40.0%
	GTATGTTGAATTGCCAGAAG+TGG	-	chr4_1:83748367-83748386	Msa0579080:intron	40.0%
!	GTGAAACAAGGAGATGGTTT+TGG	-	chr4_1:83748398-83748417	Msa0579080:intron	40.0%
	GCAATAAAACTCACCAAAGC+AGG	+	chr4_1:83748512-83748531	None:intergenic	40.0%
	AACTCAAGCCCCTATGAAAA+TGG	-	chr4_1:83748641-83748660	Msa0579080:intron	40.0%
	AAAGTTGAGATGAGTGACAG+TGG	-	chr4_1:83748674-83748693	Msa0579080:intron	40.0%
	TGGCGAACTTGACAAATTGA+TGG	-	chr4_1:83748694-83748713	Msa0579080:intron	40.0%
!	GATATTTTCCCCCTTTGCAA+TGG	-	chr4_1:83748906-83748925	Msa0579080:intron	40.0%
!!!	GCCCTTGTTTTCAACTAAGA+TGG	-	chr4_1:83749037-83749056	Msa0579080:CDS	40.0%
	CATGCAACTCATTTACTAGG+GGG	+	chr4_1:83749189-83749208	Msa0579090:intron	40.0%
	AGTGGTAGGGTTAAGGAAGT+TGG	+	chr4_1:83746816-83746835	None:intergenic	45.0%
	AGTGAAGAGTGGTAGGGTTA+AGG	+	chr4_1:83746823-83746842	None:intergenic	45.0%
	AGAGAGAGTGAAGAGTGGTA+GGG	+	chr4_1:83746829-83746848	None:intergenic	45.0%
!!	TTGCTGTGGTTGGTGACAAA+GGG	+	chr4_1:83746859-83746878	None:intergenic	45.0%
!!	ATTGCTGTGGTTGGTGACAA+AGG	+	chr4_1:83746860-83746879	None:intergenic	45.0%
	ACCGCAGACAGAGAAAAAGA+TGG	-	chr4_1:83746938-83746957	Msa0579080:three_prime_UTR	45.0%
!	GCCATCTTTTTCTCTGTCTG+CGG	+	chr4_1:83746942-83746961	None:intergenic	45.0%
!	CAGAGAAAAAGATGGCTTGC+AGG	-	chr4_1:83746946-83746965	Msa0579080:three_prime_UTR	45.0%
	AGAGATCCTGAGGTATGATG+CGG	+	chr4_1:83746991-83747010	None:intergenic	45.0%
	TGTGAAAGACAGAGATCCTG+AGG	+	chr4_1:83747001-83747020	None:intergenic	45.0%
!	GTCCGCCGTATATCAACTTT+TGG	-	chr4_1:83747281-83747300	Msa0579080:CDS	45.0%
	CAGATGAGAAGACAGAGACT+CGG	+	chr4_1:83748073-83748092	None:intergenic	45.0%
	GACGGAAAATCTGCAACCAT+TGG	-	chr4_1:83748305-83748324	Msa0579080:intron	45.0%
	GGCATGATCAGTTATGCCAA+TGG	+	chr4_1:83748324-83748343	None:intergenic	45.0%
	TGAATTGCCAGAAGTGGGAA+CGG	-	chr4_1:83748373-83748392	Msa0579080:intron	45.0%
!	TGGTGCAGTTGAAAGTGTGA+AGG	-	chr4_1:83748418-83748437	Msa0579080:intron	45.0%
	GACATCAACTCTCCTGTTTC+AGG	-	chr4_1:83748449-83748468	Msa0579080:intron	45.0%
	CAAGCCCCTATGAAAATGGA+TGG	-	chr4_1:83748645-83748664	Msa0579080:intron	45.0%
	TCGGCAAGACTATCAATGAC+TGG	+	chr4_1:83748759-83748778	None:intergenic	45.0%
	AGTGGTAGGGTTAAGGAAGT+TGG	+	chr4_1:83746816-83746835	None:intergenic	45.0%
	AGTGAAGAGTGGTAGGGTTA+AGG	+	chr4_1:83746823-83746842	None:intergenic	45.0%
	AGAGAGAGTGAAGAGTGGTA+GGG	+	chr4_1:83746829-83746848	None:intergenic	45.0%
!!	TTGCTGTGGTTGGTGACAAA+GGG	+	chr4_1:83746859-83746878	None:intergenic	45.0%
!!	ATTGCTGTGGTTGGTGACAA+AGG	+	chr4_1:83746860-83746879	None:intergenic	45.0%
	ACCGCAGACAGAGAAAAAGA+TGG	-	chr4_1:83746938-83746957	Msa0579080:three_prime_UTR	45.0%
!	GCCATCTTTTTCTCTGTCTG+CGG	+	chr4_1:83746942-83746961	None:intergenic	45.0%
!	CAGAGAAAAAGATGGCTTGC+AGG	-	chr4_1:83746946-83746965	Msa0579080:three_prime_UTR	45.0%
	AGAGATCCTGAGGTATGATG+CGG	+	chr4_1:83746991-83747010	None:intergenic	45.0%
	TGTGAAAGACAGAGATCCTG+AGG	+	chr4_1:83747001-83747020	None:intergenic	45.0%
!	GTCCGCCGTATATCAACTTT+TGG	-	chr4_1:83747281-83747300	Msa0579080:CDS	45.0%
	CAGATGAGAAGACAGAGACT+CGG	+	chr4_1:83748073-83748092	None:intergenic	45.0%
	GACGGAAAATCTGCAACCAT+TGG	-	chr4_1:83748305-83748324	Msa0579080:intron	45.0%
	GGCATGATCAGTTATGCCAA+TGG	+	chr4_1:83748324-83748343	None:intergenic	45.0%
	TGAATTGCCAGAAGTGGGAA+CGG	-	chr4_1:83748373-83748392	Msa0579080:intron	45.0%
!	TGGTGCAGTTGAAAGTGTGA+AGG	-	chr4_1:83748418-83748437	Msa0579080:intron	45.0%
	GACATCAACTCTCCTGTTTC+AGG	-	chr4_1:83748449-83748468	Msa0579080:intron	45.0%
	CAAGCCCCTATGAAAATGGA+TGG	-	chr4_1:83748645-83748664	Msa0579080:intron	45.0%
	TCGGCAAGACTATCAATGAC+TGG	+	chr4_1:83748759-83748778	None:intergenic	45.0%
	GAGAGAGAGTGAAGAGTGGT+AGG	+	chr4_1:83746830-83746849	None:intergenic	50.0%
	CTGAGAGAGAGAGTGAAGAG+TGG	+	chr4_1:83746834-83746853	None:intergenic	50.0%
!	AGATGGCTTGCAGGCAGTTA+TGG	-	chr4_1:83746955-83746974	Msa0579080:three_prime_UTR	50.0%
!	GATGGCTTGCAGGCAGTTAT+GGG	-	chr4_1:83746956-83746975	Msa0579080:three_prime_UTR	50.0%
	ACGGCAGTGAAACAAGGAGA+TGG	-	chr4_1:83748392-83748411	Msa0579080:intron	50.0%
	GAGAGAGAGTGAAGAGTGGT+AGG	+	chr4_1:83746830-83746849	None:intergenic	50.0%
	CTGAGAGAGAGAGTGAAGAG+TGG	+	chr4_1:83746834-83746853	None:intergenic	50.0%
!	AGATGGCTTGCAGGCAGTTA+TGG	-	chr4_1:83746955-83746974	Msa0579080:three_prime_UTR	50.0%
!	GATGGCTTGCAGGCAGTTAT+GGG	-	chr4_1:83746956-83746975	Msa0579080:three_prime_UTR	50.0%
	ACGGCAGTGAAACAAGGAGA+TGG	-	chr4_1:83748392-83748411	Msa0579080:intron	50.0%
	TTCACTGCCGTTCCCACTTC+TGG	+	chr4_1:83748383-83748402	None:intergenic	55.0%
	GTGGGAACGGCAGTGAAACA+AGG	-	chr4_1:83748386-83748405	Msa0579080:intron	55.0%
	GCTCAGCAACTCTCCTGCTT+TGG	-	chr4_1:83748496-83748515	Msa0579080:intron	55.0%
!	TGCGCTAGCTTCTGATGCAG+AGG	-	chr4_1:83748880-83748899	Msa0579080:intron	55.0%
!	GCGCTAGCTTCTGATGCAGA+GGG	-	chr4_1:83748881-83748900	Msa0579080:intron	55.0%
	TTCACTGCCGTTCCCACTTC+TGG	+	chr4_1:83748383-83748402	None:intergenic	55.0%
	GTGGGAACGGCAGTGAAACA+AGG	-	chr4_1:83748386-83748405	Msa0579080:intron	55.0%
	GCTCAGCAACTCTCCTGCTT+TGG	-	chr4_1:83748496-83748515	Msa0579080:intron	55.0%
!	TGCGCTAGCTTCTGATGCAG+AGG	-	chr4_1:83748880-83748899	Msa0579080:intron	55.0%
!	GCGCTAGCTTCTGATGCAGA+GGG	-	chr4_1:83748881-83748900	Msa0579080:intron	55.0%
	CCTGAGGTATGATGCGGCTC+TGG	+	chr4_1:83746985-83747004	None:intergenic	60.0%
	CCAGAGCCGCATCATACCTC+AGG	-	chr4_1:83746982-83747001	Msa0579080:three_prime_UTR	60.0%
	CCTGAGGTATGATGCGGCTC+TGG	+	chr4_1:83746985-83747004	None:intergenic	60.0%
	CCAGAGCCGCATCATACCTC+AGG	-	chr4_1:83746982-83747001	Msa0579080:three_prime_UTR	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	83746813	83749220	83746813	ID=Msa0579080;Name=Msa0579080
chr4_1	mRNA	83746813	83749220	83746813	ID=Msa0579080-mRNA-1;Parent=Msa0579080;Name=Msa0579080-mRNA-1;_AED=0.06;_eAED=0.06;_QI=144\|1\|1\|1\|1\|1\|3\|454\|155
chr4_1	exon	83746813	83747395	83746813	ID=Msa0579080-mRNA-1:exon:30575;Parent=Msa0579080-mRNA-1
chr4_1	exon	83747516	83747775	83747516	ID=Msa0579080-mRNA-1:exon:30574;Parent=Msa0579080-mRNA-1
chr4_1	exon	83748998	83749220	83748998	ID=Msa0579080-mRNA-1:exon:30573;Parent=Msa0579080-mRNA-1
chr4_1	five_prime_UTR	83749077	83749220	83749077	ID=Msa0579080-mRNA-1:five_prime_utr;Parent=Msa0579080-mRNA-1
chr4_1	CDS	83748998	83749076	83748998	ID=Msa0579080-mRNA-1:cds;Parent=Msa0579080-mRNA-1
chr4_1	CDS	83747516	83747775	83747516	ID=Msa0579080-mRNA-1:cds;Parent=Msa0579080-mRNA-1
chr4_1	CDS	83747267	83747395	83747267	ID=Msa0579080-mRNA-1:cds;Parent=Msa0579080-mRNA-1
chr4_1	three_prime_UTR	83746813	83747266	83746813	ID=Msa0579080-mRNA-1:three_prime_utr;Parent=Msa0579080-mRNA-1

Gene Sequence

>Msa0579080

ATGGCTTGCAGGCAGTTATGGGCATCCAGAGCCGCATCATACCTCAGGATCTCTGTCTTTCACAGAACCTTCTCTAACGTTCTGAACAATCTGAAGTATGCTGATTCTCATGAATGGGTGAAAGTTGACGGAAAATCTGCAACCATTGGCATAACTGATCATGCCCAAGATCATTTGGGTGATGTTGTGTATGTTGAATTGCCAGAAGTGGGAACGGCAGTGAAACAAGGAGATGGTTTTGGTGCAGTTGAAAGTGTGAAGGCAACTAGTGACATCAACTCTCCTGTTTCAGGAAAAGTGATTGAAGTTAATGAAGAGCTCAGCAACTCTCCTGCTTTGGTCAACTCAAGCCCCTATGAAAATGGATGGATAATTAAAGTTGAGATGAGTGACAGTGGCGAACTTGACAAATTGATGGATTCAGAAAAGTATACCAAGTTCTGTGAAGAAGAAGATTCCAGTCATTGA

Protein sequence

>Msa0579080

MACRQLWASRAASYLRISVFHRTFSNVLNNLKYADSHEWVKVDGKSATIGITDHAQDHLGDVVYVELPEVGTAVKQGDGFGAVESVKATSDINSPVSGKVIEVNEELSNSPALVNSSPYENGWIIKVEMSDSGELDKLMDSEKYTKFCEEEDSSH*