Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275880 | XP_003627196.1 | 91.257 | 183 | 16 | 0 | 18 | 200 | 177 | 359 | 1.06e-111 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275880 | sp|P38414|LOX1_LENCU | 77.128 | 188 | 38 | 1 | 18 | 200 | 173 | 360 | 4.35e-95 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275880 | G7LIZ2 | 91.257 | 183 | 16 | 0 | 18 | 200 | 177 | 359 | 5.07e-112 | 348 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0104980 | Msa1275880 | 0.802320 | 5.931814e-49 | -8.615850e-47 |
| Msa1275880 | Msa1275920 | 0.825084 | 5.685189e-54 | -8.615850e-47 |
| Msa1275880 | Msa1314070 | 0.879856 | 8.852743e-70 | -8.615850e-47 |
| Msa1275880 | Msa1314090 | 0.863474 | 2.425583e-64 | -8.615850e-47 |
| Msa1275880 | Msa1355130 | 0.900242 | 8.912955e-78 | -8.615850e-47 |
| Msa0372450 | Msa1275880 | 0.815385 | 9.500576e-52 | -8.615850e-47 |
| Msa0466650 | Msa1275880 | 0.803781 | 2.958547e-49 | -8.615850e-47 |
| Msa1147200 | Msa1275880 | 0.812616 | 3.875408e-51 | -8.615850e-47 |
| Msa1179130 | Msa1275880 | 0.802909 | 4.484523e-49 | -8.615850e-47 |
| Msa1179150 | Msa1275880 | 0.905695 | 3.270935e-80 | -8.615850e-47 |
| Msa0512820 | Msa1275880 | 0.820687 | 6.014327e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275880 | MtrunA17_Chr8g0343011 | 91.257 | 183 | 16 | 0 | 18 | 200 | 177 | 359 | 9.77e-116 | 348 |
| Msa1275880 | MtrunA17_Chr8g0342971 | 77.128 | 188 | 38 | 1 | 18 | 200 | 177 | 364 | 3.13e-96 | 298 |
| Msa1275880 | MtrunA17_Chr8g0344211 | 75.532 | 188 | 41 | 1 | 18 | 200 | 175 | 362 | 9.52e-96 | 296 |
| Msa1275880 | MtrunA17_Chr8g0342921 | 75.532 | 188 | 41 | 2 | 18 | 200 | 176 | 363 | 4.12e-94 | 292 |
| Msa1275880 | MtrunA17_Chr8g0342891 | 74.468 | 188 | 43 | 2 | 18 | 200 | 168 | 355 | 4.65e-94 | 292 |
| Msa1275880 | MtrunA17_Chr8g0342931 | 74.468 | 188 | 43 | 1 | 18 | 200 | 57 | 244 | 1.55e-91 | 283 |
| Msa1275880 | MtrunA17_Chr8g0342951 | 77.660 | 188 | 37 | 1 | 18 | 200 | 175 | 362 | 9.72e-90 | 281 |
| Msa1275880 | MtrunA17_Chr8g0342881 | 67.553 | 188 | 56 | 1 | 18 | 200 | 163 | 350 | 9.22e-85 | 267 |
| Msa1275880 | MtrunA17_Chr2g0329911 | 65.608 | 189 | 59 | 1 | 18 | 200 | 168 | 356 | 9.33e-83 | 262 |
| Msa1275880 | MtrunA17_Chr5g0406871 | 62.766 | 188 | 63 | 2 | 19 | 200 | 177 | 363 | 1.47e-78 | 251 |
| Msa1275880 | MtrunA17_Chr8g0343031 | 62.234 | 188 | 64 | 2 | 19 | 200 | 175 | 361 | 2.28e-76 | 245 |
| Msa1275880 | MtrunA17_Chr2g0329901 | 61.702 | 188 | 67 | 1 | 18 | 200 | 173 | 360 | 1.62e-75 | 243 |
| Msa1275880 | MtrunA17_Chr8g0343021 | 60.106 | 188 | 68 | 2 | 19 | 200 | 174 | 360 | 9.28e-74 | 238 |
| Msa1275880 | MtrunA17_Chr3g0120071 | 60.428 | 187 | 71 | 2 | 18 | 201 | 167 | 353 | 2.62e-71 | 231 |
| Msa1275880 | MtrunA17_Chr8g0342901 | 75.172 | 145 | 34 | 1 | 18 | 160 | 161 | 305 | 8.25e-69 | 224 |
| Msa1275880 | MtrunA17_Chr1g0191921 | 52.332 | 193 | 81 | 3 | 18 | 199 | 160 | 352 | 4.04e-60 | 201 |
| Msa1275880 | MtrunA17_Chr8g0342991 | 64.430 | 149 | 48 | 1 | 18 | 161 | 157 | 305 | 6.83e-57 | 192 |
| Msa1275880 | MtrunA17_Chr7g0272791 | 51.795 | 195 | 82 | 4 | 18 | 200 | 168 | 362 | 1.15e-56 | 191 |
| Msa1275880 | MtrunA17_Chr1g0205611 | 50.256 | 195 | 86 | 3 | 18 | 201 | 153 | 347 | 1.73e-56 | 191 |
| Msa1275880 | MtrunA17_Chr8g0343001 | 63.087 | 149 | 50 | 1 | 18 | 161 | 157 | 305 | 4.50e-55 | 187 |
| Msa1275880 | MtrunA17_Chr8g0342981 | 59.375 | 160 | 39 | 3 | 18 | 171 | 144 | 283 | 7.41e-52 | 178 |
| Msa1275880 | MtrunA17_Chr4g0033171 | 48.677 | 189 | 87 | 5 | 18 | 199 | 30 | 215 | 1.09e-46 | 163 |
| Msa1275880 | MtrunA17_Chr3g0118641 | 46.842 | 190 | 88 | 5 | 18 | 197 | 205 | 391 | 6.09e-44 | 156 |
| Msa1275880 | MtrunA17_Chr3g0118651 | 44.503 | 191 | 97 | 3 | 18 | 200 | 206 | 395 | 3.37e-43 | 154 |
| Msa1275880 | MtrunA17_Chr8g0344201 | 44.792 | 192 | 96 | 4 | 18 | 199 | 229 | 420 | 6.40e-42 | 150 |
| Msa1275880 | MtrunA17_Chr3g0118621 | 44.737 | 190 | 92 | 5 | 18 | 197 | 167 | 353 | 8.06e-42 | 150 |
| Msa1275880 | MtrunA17_Chr8g0338451 | 50.769 | 130 | 56 | 2 | 18 | 143 | 172 | 297 | 4.38e-32 | 122 |
| Msa1275880 | MtrunA17_Chr8g0377101 | 39.086 | 197 | 104 | 7 | 18 | 201 | 217 | 410 | 1.23e-30 | 118 |
| Msa1275880 | MtrunA17_Chr4g0047281 | 48.485 | 132 | 60 | 4 | 18 | 142 | 217 | 347 | 1.19e-28 | 112 |
| Msa1275880 | MtrunA17_Chr8g0344241 | 59.677 | 62 | 20 | 1 | 137 | 193 | 9 | 70 | 3.87e-15 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275880 | AT1G55020.1 | 54.082 | 196 | 73 | 5 | 18 | 200 | 163 | 354 | 5.85e-60 | 201 |
| Msa1275880 | AT3G22400.1 | 53.846 | 195 | 78 | 4 | 18 | 200 | 182 | 376 | 2.86e-58 | 196 |
| Msa1275880 | AT1G72520.1 | 45.989 | 187 | 93 | 4 | 20 | 199 | 232 | 417 | 2.41e-42 | 152 |
| Msa1275880 | AT3G45140.2 | 42.708 | 192 | 95 | 6 | 18 | 199 | 59 | 245 | 1.48e-40 | 146 |
| Msa1275880 | AT3G45140.1 | 42.708 | 192 | 95 | 6 | 18 | 199 | 201 | 387 | 1.66e-40 | 146 |
| Msa1275880 | AT1G17420.1 | 44.681 | 188 | 95 | 5 | 20 | 199 | 226 | 412 | 1.77e-39 | 144 |
| Msa1275880 | AT1G67560.1 | 47.020 | 151 | 72 | 4 | 21 | 165 | 221 | 369 | 4.04e-31 | 119 |
Find 50 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAATGTTGCTAAGAAAAT+TGG | 0.242674 | 8_3:+10149319 | None:intergenic |
| TATATACCTTGAACCACTTT+AGG | 0.298418 | 8_3:+10149233 | None:intergenic |
| CAATTGGCTCGTCCAGTTCT+TGG | 0.313570 | 8_3:-10149772 | Msa1275880:CDS |
| CTTTAGGTGGTGAAAACTTA+AGG | 0.316360 | 8_3:+10149249 | None:intergenic |
| CTTCCAAGAGATGAATCATT+TGG | 0.339142 | 8_3:-10149488 | Msa1275880:CDS |
| CTGCTCCGACTCTCACTCTT+AGG | 0.340603 | 8_3:+10149521 | None:intergenic |
| TGTCCAAATGATTCATCTCT+TGG | 0.366514 | 8_3:+10149485 | None:intergenic |
| GCCAATTGAGGTTTCGAGTC+AGG | 0.371804 | 8_3:+10149787 | None:intergenic |
| AGTGGGAAAGCAAACATTCT+TGG | 0.371915 | 8_3:-10150284 | Msa1275880:CDS |
| TTACGATGTGTACAATGATT+TGG | 0.383678 | 8_3:-10149815 | Msa1275880:CDS |
| TTTAGGTGGTGAAAACTTAA+GGG | 0.393850 | 8_3:+10149250 | None:intergenic |
| GAAGAACTGAAGACTTTAAG+AGG | 0.423819 | 8_3:-10149880 | Msa1275880:CDS |
| TACGATGTGTACAATGATTT+GGG | 0.430619 | 8_3:-10149814 | Msa1275880:CDS |
| GTTCCGTGAACAATGGTATT+GGG | 0.431028 | 8_3:+10149297 | None:intergenic |
| AGTTCCGTGAACAATGGTAT+TGG | 0.444609 | 8_3:+10149296 | None:intergenic |
| GTGCTCGATCCTCCAAGAAC+TGG | 0.447012 | 8_3:+10149760 | None:intergenic |
| AGATGGAAAAGGAGAGCGTA+AGG | 0.452420 | 8_3:-10149857 | Msa1275880:CDS |
| AGGAAGTGGAAAAGGAAAAG+TGG | 0.456842 | 8_3:-10150302 | Msa1275880:CDS |
| GCCTGACTCGAAACCTCAAT+TGG | 0.465501 | 8_3:-10149788 | Msa1275880:CDS |
| TTTGTTAACTATAGATGTAA+AGG | 0.472776 | 8_3:+10149400 | None:intergenic |
| TCACCACCTAAAGTGGTTCA+AGG | 0.476967 | 8_3:-10149239 | Msa1275880:CDS |
| CTGAAGACTTTAAGAGGAGA+TGG | 0.480116 | 8_3:-10149874 | Msa1275880:CDS |
| AATGGAGCCGGTGTTTCACT+TGG | 0.495288 | 8_3:+10149919 | None:intergenic |
| TAGCCCAATACCATTGTTCA+CGG | 0.497063 | 8_3:-10149300 | Msa1275880:CDS |
| AAGTGAAACACCGGCTCCAT+TGG | 0.497782 | 8_3:-10149917 | Msa1275880:CDS |
| AAAAGGAGAGCGTAAGGAAT+GGG | 0.499065 | 8_3:-10149851 | Msa1275880:CDS |
| ATTTGTGTAGGAAGTGGAAA+AGG | 0.499814 | 8_3:-10150310 | Msa1275880:intron |
| CGGTGTTTCACTTGGAAGGT+AGG | 0.509768 | 8_3:+10149927 | None:intergenic |
| ACTTTAAGAGGAGATGGAAA+AGG | 0.522057 | 8_3:-10149868 | Msa1275880:CDS |
| CACCTTGCCTTACCCTCGAA+GGG | 0.522918 | 8_3:-10149740 | Msa1275880:CDS |
| CTGTAGTACACCAATGGAGC+CGG | 0.524613 | 8_3:+10149907 | None:intergenic |
| TTGGCTCGTCCAGTTCTTGG+AGG | 0.527379 | 8_3:-10149769 | Msa1275880:CDS |
| AGAACTGGACGAGCCAATTG+AGG | 0.533875 | 8_3:+10149775 | None:intergenic |
| GCACCTTGCCTTACCCTCGA+AGG | 0.541788 | 8_3:-10149741 | Msa1275880:CDS |
| GGAAGTGGAAAAGGAAAAGT+GGG | 0.542323 | 8_3:-10150301 | Msa1275880:CDS |
| TCTTCTCTGTAGTACACCAA+TGG | 0.542889 | 8_3:+10149901 | None:intergenic |
| GAAAAGGAGAGCGTAAGGAA+TGG | 0.544678 | 8_3:-10149852 | Msa1275880:CDS |
| TTAACTATAGATGTAAAGGA+AGG | 0.552577 | 8_3:+10149404 | None:intergenic |
| GTGCGGTCGCTTTACGATGG+TGG | 0.560314 | 8_3:-10149356 | Msa1275880:CDS |
| ATACCTTGAACCACTTTAGG+TGG | 0.560948 | 8_3:+10149236 | None:intergenic |
| CAAATGATTCATCTCTTGGA+AGG | 0.568278 | 8_3:+10149489 | None:intergenic |
| GAGCCGGTGTTTCACTTGGA+AGG | 0.583942 | 8_3:+10149923 | None:intergenic |
| GGAAAGCAAACATTCTTGGA+AGG | 0.606371 | 8_3:-10150280 | Msa1275880:intron |
| GAGAGCGTAAGGAATGGGAT+AGG | 0.615866 | 8_3:-10149846 | Msa1275880:CDS |
| TTAACAACTTTGAAGATGTG+CGG | 0.623339 | 8_3:-10149373 | Msa1275880:CDS |
| CTACCTTCCAAGTGAAACAC+CGG | 0.634390 | 8_3:-10149926 | Msa1275880:CDS |
| ACCTTGCCTTACCCTCGAAG+GGG | 0.664037 | 8_3:-10149739 | Msa1275880:CDS |
| CAGATCCTAAGAGTGAGAGT+CGG | 0.665288 | 8_3:-10149526 | Msa1275880:CDS |
| ATGTTGCTAAGAAAATTGGT+AGG | 0.679667 | 8_3:+10149323 | None:intergenic |
| CCTTGCCTTACCCTCGAAGG+GGG | 0.709915 | 8_3:-10149738 | Msa1275880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAGTTAAATATGTTTT+TGG | - | chr8_3:10149558-10149577 | Msa1275880:intron | 10.0% |
| !! | ATATATATTCTTCAAATATT+TGG | - | chr8_3:10150200-10150219 | Msa1275880:intron | 10.0% |
| !!! | AAAAAAGTTAAATATGTTTT+TGG | - | chr8_3:10149558-10149577 | Msa1275880:intron | 10.0% |
| !! | ATATATATTCTTCAAATATT+TGG | - | chr8_3:10150200-10150219 | Msa1275880:intron | 10.0% |
| !!! | TTTTTTTTGAAAGAATTAGT+AGG | - | chr8_3:10149367-10149386 | Msa1275880:CDS | 15.0% |
| !!! | CAAAGATTTTTTTTTTTTGA+AGG | - | chr8_3:10149454-10149473 | Msa1275880:CDS | 15.0% |
| !! | AATAAATAAAATAAGCCATT+TGG | - | chr8_3:10149502-10149521 | Msa1275880:CDS | 15.0% |
| !! | TAATTGATTATCAATTATAG+AGG | + | chr8_3:10150358-10150377 | None:intergenic | 15.0% |
| !!! | TTATTTATTTTCCTCAAATA+TGG | + | chr8_3:10150440-10150459 | None:intergenic | 15.0% |
| !! | GGAAAATAAATAAATTTAGT+AGG | - | chr8_3:10150447-10150466 | Msa1275880:intron | 15.0% |
| !!! | TTTTTTTTGAAAGAATTAGT+AGG | - | chr8_3:10149367-10149386 | Msa1275880:CDS | 15.0% |
| !!! | CAAAGATTTTTTTTTTTTGA+AGG | - | chr8_3:10149454-10149473 | Msa1275880:CDS | 15.0% |
| !! | AATAAATAAAATAAGCCATT+TGG | - | chr8_3:10149502-10149521 | Msa1275880:CDS | 15.0% |
| !! | TAATTGATTATCAATTATAG+AGG | + | chr8_3:10150358-10150377 | None:intergenic | 15.0% |
| !!! | TTATTTATTTTCCTCAAATA+TGG | + | chr8_3:10150440-10150459 | None:intergenic | 15.0% |
| !! | GGAAAATAAATAAATTTAGT+AGG | - | chr8_3:10150447-10150466 | Msa1275880:intron | 15.0% |
| !!! | TGAATGTCATTATTTTTTTG+AGG | - | chr8_3:10149233-10149252 | Msa1275880:CDS | 20.0% |
| !!! | GAATGTCATTATTTTTTTGA+GGG | - | chr8_3:10149234-10149253 | Msa1275880:CDS | 20.0% |
| !!! | TTTTTTTTTTTTGAAGGAAG+CGG | - | chr8_3:10149460-10149479 | Msa1275880:CDS | 20.0% |
| !!! | AGAATACTAATTTTACCAAA+TGG | + | chr8_3:10149520-10149539 | None:intergenic | 20.0% |
| !!! | ATCTTTTAGAAATATTTGAG+AGG | + | chr8_3:10149699-10149718 | None:intergenic | 20.0% |
| !!! | TAGTTAATAAAAAGGTTTTC+TGG | + | chr8_3:10149733-10149752 | None:intergenic | 20.0% |
| !! | GTCTCATTTAGTTAATAAAA+AGG | + | chr8_3:10149741-10149760 | None:intergenic | 20.0% |
| !! | ATGAACTTTATATAAAAGCT+GGG | + | chr8_3:10149916-10149935 | None:intergenic | 20.0% |
| !! | TATGAACTTTATATAAAAGC+TGG | + | chr8_3:10149917-10149936 | None:intergenic | 20.0% |
| !! | TTAGAATTATAAAAAGCAAG+GGG | + | chr8_3:10150027-10150046 | None:intergenic | 20.0% |
| !! | CTTAGAATTATAAAAAGCAA+GGG | + | chr8_3:10150028-10150047 | None:intergenic | 20.0% |
| !! | TTTAATAAAAAAAAAGGTCC+TGG | - | chr8_3:10150074-10150093 | Msa1275880:intron | 20.0% |
| !! | TACTGATAAGTGAAATAATT+TGG | + | chr8_3:10150404-10150423 | None:intergenic | 20.0% |
| !!! | ATTCATTTTGAAATTTGTGT+AGG | - | chr8_3:10150548-10150567 | Msa1275880:intron | 20.0% |
| !!! | AATATTTTAGTTAGAACAGA+AGG | + | chr8_3:10151192-10151211 | None:intergenic | 20.0% |
| !! | TTTGTTAACTATAGATGTAA+AGG | + | chr8_3:10151473-10151492 | None:intergenic | 20.0% |
| !!! | TGAATGTCATTATTTTTTTG+AGG | - | chr8_3:10149233-10149252 | Msa1275880:CDS | 20.0% |
| !!! | GAATGTCATTATTTTTTTGA+GGG | - | chr8_3:10149234-10149253 | Msa1275880:CDS | 20.0% |
| !!! | TTTTTTTTTTTTGAAGGAAG+CGG | - | chr8_3:10149460-10149479 | Msa1275880:CDS | 20.0% |
| !!! | AGAATACTAATTTTACCAAA+TGG | + | chr8_3:10149520-10149539 | None:intergenic | 20.0% |
| !!! | ATCTTTTAGAAATATTTGAG+AGG | + | chr8_3:10149699-10149718 | None:intergenic | 20.0% |
| !!! | TAGTTAATAAAAAGGTTTTC+TGG | + | chr8_3:10149733-10149752 | None:intergenic | 20.0% |
| !! | GTCTCATTTAGTTAATAAAA+AGG | + | chr8_3:10149741-10149760 | None:intergenic | 20.0% |
| !! | ATGAACTTTATATAAAAGCT+GGG | + | chr8_3:10149916-10149935 | None:intergenic | 20.0% |
| !! | TATGAACTTTATATAAAAGC+TGG | + | chr8_3:10149917-10149936 | None:intergenic | 20.0% |
| !! | TTAGAATTATAAAAAGCAAG+GGG | + | chr8_3:10150027-10150046 | None:intergenic | 20.0% |
| !! | CTTAGAATTATAAAAAGCAA+GGG | + | chr8_3:10150028-10150047 | None:intergenic | 20.0% |
| !! | TTTAATAAAAAAAAAGGTCC+TGG | - | chr8_3:10150074-10150093 | Msa1275880:intron | 20.0% |
| !! | TACTGATAAGTGAAATAATT+TGG | + | chr8_3:10150404-10150423 | None:intergenic | 20.0% |
| !!! | ATTCATTTTGAAATTTGTGT+AGG | - | chr8_3:10150548-10150567 | Msa1275880:intron | 20.0% |
| !!! | AATATTTTAGTTAGAACAGA+AGG | + | chr8_3:10151192-10151211 | None:intergenic | 20.0% |
| !! | TTTGTTAACTATAGATGTAA+AGG | + | chr8_3:10151473-10151492 | None:intergenic | 20.0% |
| ! | AATTCTACCATCTAATTAGT+AGG | - | chr8_3:10149336-10149355 | Msa1275880:CDS | 25.0% |
| !!! | CATAGTGCTATTATTTCTTT+TGG | + | chr8_3:10149406-10149425 | None:intergenic | 25.0% |
| ! | AAAGAAATAATAGCACTATG+TGG | - | chr8_3:10149406-10149425 | Msa1275880:CDS | 25.0% |
| ! | TGAACTTTATATAAAAGCTG+GGG | + | chr8_3:10149915-10149934 | None:intergenic | 25.0% |
| ! | GCTTAGAATTATAAAAAGCA+AGG | + | chr8_3:10150029-10150048 | None:intergenic | 25.0% |
| !! | AGAAAAAAATTGGCTTAGAA+TGG | + | chr8_3:10150051-10150070 | None:intergenic | 25.0% |
| !! | TTTCGGTATTCATTTTGAAT+GGG | - | chr8_3:10150655-10150674 | Msa1275880:intron | 25.0% |
| ! | CATTGTAGATAAATATGTGT+TGG | + | chr8_3:10151316-10151335 | None:intergenic | 25.0% |
| ! | TTAACTATAGATGTAAAGGA+AGG | + | chr8_3:10151469-10151488 | None:intergenic | 25.0% |
| ! | AATTCTACCATCTAATTAGT+AGG | - | chr8_3:10149336-10149355 | Msa1275880:CDS | 25.0% |
| !!! | CATAGTGCTATTATTTCTTT+TGG | + | chr8_3:10149406-10149425 | None:intergenic | 25.0% |
| ! | AAAGAAATAATAGCACTATG+TGG | - | chr8_3:10149406-10149425 | Msa1275880:CDS | 25.0% |
| ! | TGAACTTTATATAAAAGCTG+GGG | + | chr8_3:10149915-10149934 | None:intergenic | 25.0% |
| ! | GCTTAGAATTATAAAAAGCA+AGG | + | chr8_3:10150029-10150048 | None:intergenic | 25.0% |
| !! | AGAAAAAAATTGGCTTAGAA+TGG | + | chr8_3:10150051-10150070 | None:intergenic | 25.0% |
| !! | TTTCGGTATTCATTTTGAAT+GGG | - | chr8_3:10150655-10150674 | Msa1275880:intron | 25.0% |
| ! | CATTGTAGATAAATATGTGT+TGG | + | chr8_3:10151316-10151335 | None:intergenic | 25.0% |
| ! | TTAACTATAGATGTAAAGGA+AGG | + | chr8_3:10151469-10151488 | None:intergenic | 25.0% |
| ACATAGTCCTACTAATTAGA+TGG | + | chr8_3:10149346-10149365 | None:intergenic | 30.0% | |
| AACTTTATATAAAAGCTGGG+GGG | + | chr8_3:10149913-10149932 | None:intergenic | 30.0% | |
| GAACTTTATATAAAAGCTGG+GGG | + | chr8_3:10149914-10149933 | None:intergenic | 30.0% | |
| ATAAAAAAAAAGGTCCTGGT+AGG | - | chr8_3:10150078-10150097 | Msa1275880:intron | 30.0% | |
| AAACATACATCACTGTAAAC+TGG | + | chr8_3:10150166-10150185 | None:intergenic | 30.0% | |
| !!! | ATCTTGAAATTTTTTTCCGG+GGG | + | chr8_3:10150228-10150247 | None:intergenic | 30.0% |
| !!! | GATCTTGAAATTTTTTTCCG+GGG | + | chr8_3:10150229-10150248 | None:intergenic | 30.0% |
| !!! | GGATCTTGAAATTTTTTTCC+GGG | + | chr8_3:10150230-10150249 | None:intergenic | 30.0% |
| !!! | CGGATCTTGAAATTTTTTTC+CGG | + | chr8_3:10150231-10150250 | None:intergenic | 30.0% |
| ! | TTTGAAATTTGTGTAGGAAG+TGG | - | chr8_3:10150554-10150573 | Msa1275880:intron | 30.0% |
| ! | CTTTCGGTATTCATTTTGAA+TGG | - | chr8_3:10150654-10150673 | Msa1275880:intron | 30.0% |
| ! | TTCGGTATTCATTTTGAATG+GGG | - | chr8_3:10150656-10150675 | Msa1275880:intron | 30.0% |
| TTACGATGTGTACAATGATT+TGG | - | chr8_3:10151055-10151074 | Msa1275880:intron | 30.0% | |
| TACGATGTGTACAATGATTT+GGG | - | chr8_3:10151056-10151075 | Msa1275880:intron | 30.0% | |
| !!! | AAGGTTTAACCTTTTTTAGC+TGG | + | chr8_3:10151173-10151192 | None:intergenic | 30.0% |
| ! | TTCTACGTAGATGTTTTCAA+TGG | - | chr8_3:10151229-10151248 | Msa1275880:intron | 30.0% |
| ! | TTAACAACTTTGAAGATGTG+CGG | - | chr8_3:10151497-10151516 | Msa1275880:intron | 30.0% |
| ATGTTGCTAAGAAAATTGGT+AGG | + | chr8_3:10151550-10151569 | None:intergenic | 30.0% | |
| GCTAATGTTGCTAAGAAAAT+TGG | + | chr8_3:10151554-10151573 | None:intergenic | 30.0% | |
| TTTAGGTGGTGAAAACTTAA+GGG | + | chr8_3:10151623-10151642 | None:intergenic | 30.0% | |
| TATATACCTTGAACCACTTT+AGG | + | chr8_3:10151640-10151659 | None:intergenic | 30.0% | |
| ACATAGTCCTACTAATTAGA+TGG | + | chr8_3:10149346-10149365 | None:intergenic | 30.0% | |
| AACTTTATATAAAAGCTGGG+GGG | + | chr8_3:10149913-10149932 | None:intergenic | 30.0% | |
| GAACTTTATATAAAAGCTGG+GGG | + | chr8_3:10149914-10149933 | None:intergenic | 30.0% | |
| ATAAAAAAAAAGGTCCTGGT+AGG | - | chr8_3:10150078-10150097 | Msa1275880:intron | 30.0% | |
| AAACATACATCACTGTAAAC+TGG | + | chr8_3:10150166-10150185 | None:intergenic | 30.0% | |
| !!! | ATCTTGAAATTTTTTTCCGG+GGG | + | chr8_3:10150228-10150247 | None:intergenic | 30.0% |
| !!! | GATCTTGAAATTTTTTTCCG+GGG | + | chr8_3:10150229-10150248 | None:intergenic | 30.0% |
| !!! | GGATCTTGAAATTTTTTTCC+GGG | + | chr8_3:10150230-10150249 | None:intergenic | 30.0% |
| !!! | CGGATCTTGAAATTTTTTTC+CGG | + | chr8_3:10150231-10150250 | None:intergenic | 30.0% |
| ! | TTTGAAATTTGTGTAGGAAG+TGG | - | chr8_3:10150554-10150573 | Msa1275880:intron | 30.0% |
| ! | CTTTCGGTATTCATTTTGAA+TGG | - | chr8_3:10150654-10150673 | Msa1275880:intron | 30.0% |
| ! | TTCGGTATTCATTTTGAATG+GGG | - | chr8_3:10150656-10150675 | Msa1275880:intron | 30.0% |
| TTACGATGTGTACAATGATT+TGG | - | chr8_3:10151055-10151074 | Msa1275880:intron | 30.0% | |
| TACGATGTGTACAATGATTT+GGG | - | chr8_3:10151056-10151075 | Msa1275880:intron | 30.0% | |
| !!! | AAGGTTTAACCTTTTTTAGC+TGG | + | chr8_3:10151173-10151192 | None:intergenic | 30.0% |
| ! | TTCTACGTAGATGTTTTCAA+TGG | - | chr8_3:10151229-10151248 | Msa1275880:intron | 30.0% |
| ! | TTAACAACTTTGAAGATGTG+CGG | - | chr8_3:10151497-10151516 | Msa1275880:intron | 30.0% |
| ATGTTGCTAAGAAAATTGGT+AGG | + | chr8_3:10151550-10151569 | None:intergenic | 30.0% | |
| GCTAATGTTGCTAAGAAAAT+TGG | + | chr8_3:10151554-10151573 | None:intergenic | 30.0% | |
| TTTAGGTGGTGAAAACTTAA+GGG | + | chr8_3:10151623-10151642 | None:intergenic | 30.0% | |
| TATATACCTTGAACCACTTT+AGG | + | chr8_3:10151640-10151659 | None:intergenic | 30.0% | |
| AAATTGTGAGATGACATGCA+GGG | - | chr8_3:10149852-10149871 | Msa1275880:CDS | 35.0% | |
| ATAGTTAGAGCTCATAAGGT+GGG | + | chr8_3:10150312-10150331 | None:intergenic | 35.0% | |
| TATAGTTAGAGCTCATAAGG+TGG | + | chr8_3:10150313-10150332 | None:intergenic | 35.0% | |
| GCATATAGTTAGAGCTCATA+AGG | + | chr8_3:10150316-10150335 | None:intergenic | 35.0% | |
| TTATAGAGGTTACTGATGCT+GGG | + | chr8_3:10150344-10150363 | None:intergenic | 35.0% | |
| ATTATAGAGGTTACTGATGC+TGG | + | chr8_3:10150345-10150364 | None:intergenic | 35.0% | |
| ACTCAGTGTATCCATATTTG+AGG | - | chr8_3:10150426-10150445 | Msa1275880:intron | 35.0% | |
| ATTTGTGTAGGAAGTGGAAA+AGG | - | chr8_3:10150560-10150579 | Msa1275880:intron | 35.0% | |
| TATTACCTCCATACCAACAT+TGG | - | chr8_3:10150616-10150635 | Msa1275880:intron | 35.0% | |
| ATTACCTCCATACCAACATT+GGG | - | chr8_3:10150617-10150636 | Msa1275880:intron | 35.0% | |
| !! | TTTTGTTTGTCTCCCAATGT+TGG | + | chr8_3:10150632-10150651 | None:intergenic | 35.0% |
| GGAGACAAACAAAATGCTTT+CGG | - | chr8_3:10150638-10150657 | Msa1275880:intron | 35.0% | |
| TTCTCAATATAGAATGCTCC+TGG | + | chr8_3:10150698-10150717 | None:intergenic | 35.0% | |
| !! | TCTTTTTCGCTAACAAGGTA+AGG | - | chr8_3:10150840-10150859 | Msa1275880:intron | 35.0% |
| GAAGAACTGAAGACTTTAAG+AGG | - | chr8_3:10150990-10151009 | Msa1275880:intron | 35.0% | |
| ! | ACTTTAAGAGGAGATGGAAA+AGG | - | chr8_3:10151002-10151021 | Msa1275880:intron | 35.0% |
| ! | GGTATTGTAACTTGTGTGAT+AGG | - | chr8_3:10151250-10151269 | Msa1275880:intron | 35.0% |
| CAAATGATTCATCTCTTGGA+AGG | + | chr8_3:10151384-10151403 | None:intergenic | 35.0% | |
| CTTCCAAGAGATGAATCATT+TGG | - | chr8_3:10151382-10151401 | Msa1275880:intron | 35.0% | |
| TGTCCAAATGATTCATCTCT+TGG | + | chr8_3:10151388-10151407 | None:intergenic | 35.0% | |
| CTTTAGGTGGTGAAAACTTA+AGG | + | chr8_3:10151624-10151643 | None:intergenic | 35.0% | |
| ! | TAAGTTTTCACCACCTAAAG+TGG | - | chr8_3:10151624-10151643 | Msa1275880:intron | 35.0% |
| AAATTGTGAGATGACATGCA+GGG | - | chr8_3:10149852-10149871 | Msa1275880:CDS | 35.0% | |
| ATAGTTAGAGCTCATAAGGT+GGG | + | chr8_3:10150312-10150331 | None:intergenic | 35.0% | |
| TATAGTTAGAGCTCATAAGG+TGG | + | chr8_3:10150313-10150332 | None:intergenic | 35.0% | |
| GCATATAGTTAGAGCTCATA+AGG | + | chr8_3:10150316-10150335 | None:intergenic | 35.0% | |
| TTATAGAGGTTACTGATGCT+GGG | + | chr8_3:10150344-10150363 | None:intergenic | 35.0% | |
| ATTATAGAGGTTACTGATGC+TGG | + | chr8_3:10150345-10150364 | None:intergenic | 35.0% | |
| ACTCAGTGTATCCATATTTG+AGG | - | chr8_3:10150426-10150445 | Msa1275880:intron | 35.0% | |
| ATTTGTGTAGGAAGTGGAAA+AGG | - | chr8_3:10150560-10150579 | Msa1275880:intron | 35.0% | |
| TATTACCTCCATACCAACAT+TGG | - | chr8_3:10150616-10150635 | Msa1275880:intron | 35.0% | |
| ATTACCTCCATACCAACATT+GGG | - | chr8_3:10150617-10150636 | Msa1275880:intron | 35.0% | |
| !! | TTTTGTTTGTCTCCCAATGT+TGG | + | chr8_3:10150632-10150651 | None:intergenic | 35.0% |
| GGAGACAAACAAAATGCTTT+CGG | - | chr8_3:10150638-10150657 | Msa1275880:intron | 35.0% | |
| TTCTCAATATAGAATGCTCC+TGG | + | chr8_3:10150698-10150717 | None:intergenic | 35.0% | |
| !! | TCTTTTTCGCTAACAAGGTA+AGG | - | chr8_3:10150840-10150859 | Msa1275880:intron | 35.0% |
| GAAGAACTGAAGACTTTAAG+AGG | - | chr8_3:10150990-10151009 | Msa1275880:intron | 35.0% | |
| ! | ACTTTAAGAGGAGATGGAAA+AGG | - | chr8_3:10151002-10151021 | Msa1275880:intron | 35.0% |
| ! | GGTATTGTAACTTGTGTGAT+AGG | - | chr8_3:10151250-10151269 | Msa1275880:intron | 35.0% |
| CAAATGATTCATCTCTTGGA+AGG | + | chr8_3:10151384-10151403 | None:intergenic | 35.0% | |
| CTTCCAAGAGATGAATCATT+TGG | - | chr8_3:10151382-10151401 | Msa1275880:intron | 35.0% | |
| TGTCCAAATGATTCATCTCT+TGG | + | chr8_3:10151388-10151407 | None:intergenic | 35.0% | |
| CTTTAGGTGGTGAAAACTTA+AGG | + | chr8_3:10151624-10151643 | None:intergenic | 35.0% | |
| ! | TAAGTTTTCACCACCTAAAG+TGG | - | chr8_3:10151624-10151643 | Msa1275880:intron | 35.0% |
| !! | TCAGAGTGCTTTTGCCTTTT+AGG | - | chr8_3:10149655-10149674 | Msa1275880:intron | 40.0% |
| GAAATTGTGAGATGACATGC+AGG | - | chr8_3:10149851-10149870 | Msa1275880:CDS | 40.0% | |
| AATTGTGAGATGACATGCAG+GGG | - | chr8_3:10149853-10149872 | Msa1275880:CDS | 40.0% | |
| TTATAAAAAGCAAGGGGCCA+GGG | + | chr8_3:10150021-10150040 | None:intergenic | 40.0% | |
| ATTATAAAAAGCAAGGGGCC+AGG | + | chr8_3:10150022-10150041 | None:intergenic | 40.0% | |
| TATTGCCATGTCTGATGCAA+GGG | + | chr8_3:10150132-10150151 | None:intergenic | 40.0% | |
| TACATCACTGTAAACTGGTG+TGG | + | chr8_3:10150161-10150180 | None:intergenic | 40.0% | |
| TAGTTAGAGCTCATAAGGTG+GGG | + | chr8_3:10150311-10150330 | None:intergenic | 40.0% | |
| TATAGAGGTTACTGATGCTG+GGG | + | chr8_3:10150343-10150362 | None:intergenic | 40.0% | |
| AGGAAGTGGAAAAGGAAAAG+TGG | - | chr8_3:10150568-10150587 | Msa1275880:intron | 40.0% | |
| GGAAGTGGAAAAGGAAAAGT+GGG | - | chr8_3:10150569-10150588 | Msa1275880:intron | 40.0% | |
| AGTGGGAAAGCAAACATTCT+TGG | - | chr8_3:10150586-10150605 | Msa1275880:intron | 40.0% | |
| GGAAAGCAAACATTCTTGGA+AGG | - | chr8_3:10150590-10150609 | Msa1275880:intron | 40.0% | |
| TTTGTCTCCCAATGTTGGTA+TGG | + | chr8_3:10150627-10150646 | None:intergenic | 40.0% | |
| CTTCAAGTGTCAAACTCACA+AGG | + | chr8_3:10150742-10150761 | None:intergenic | 40.0% | |
| CTTGAAGATGTTCCAAACCA+TGG | - | chr8_3:10150755-10150774 | Msa1275880:intron | 40.0% | |
| AAACAAAGTGGATGGATCCA+TGG | + | chr8_3:10150775-10150794 | None:intergenic | 40.0% | |
| TGAGTTGCAAACAAAGTGGA+TGG | + | chr8_3:10150783-10150802 | None:intergenic | 40.0% | |
| ! | TCCACTTTGTTTGCAACTCA+TGG | - | chr8_3:10150783-10150802 | Msa1275880:intron | 40.0% |
| ! | CCACTTTGTTTGCAACTCAT+GGG | - | chr8_3:10150784-10150803 | Msa1275880:intron | 40.0% |
| CCTTGTTAGCGAAAAAGATG+CGG | + | chr8_3:10150838-10150857 | None:intergenic | 40.0% | |
| TCTTCTCTGTAGTACACCAA+TGG | + | chr8_3:10150972-10150991 | None:intergenic | 40.0% | |
| ! | CTGAAGACTTTAAGAGGAGA+TGG | - | chr8_3:10150996-10151015 | Msa1275880:intron | 40.0% |
| ! | AAAAGGAGAGCGTAAGGAAT+GGG | - | chr8_3:10151019-10151038 | Msa1275880:intron | 40.0% |
| GGCAGAAAACCAGCTAAAAA+AGG | - | chr8_3:10151161-10151180 | Msa1275880:intron | 40.0% | |
| TAGCCCAATACCATTGTTCA+CGG | - | chr8_3:10151570-10151589 | Msa1275880:intron | 40.0% | |
| GTTCCGTGAACAATGGTATT+GGG | + | chr8_3:10151576-10151595 | None:intergenic | 40.0% | |
| AGTTCCGTGAACAATGGTAT+TGG | + | chr8_3:10151577-10151596 | None:intergenic | 40.0% | |
| CGAAAAAGTTCCGTGAACAA+TGG | + | chr8_3:10151583-10151602 | None:intergenic | 40.0% | |
| !!! | ACGGAACTTTTTCGATCTGA+TGG | - | chr8_3:10151589-10151608 | Msa1275880:intron | 40.0% |
| ATACCTTGAACCACTTTAGG+TGG | + | chr8_3:10151637-10151656 | None:intergenic | 40.0% | |
| !! | TCAGAGTGCTTTTGCCTTTT+AGG | - | chr8_3:10149655-10149674 | Msa1275880:intron | 40.0% |
| GAAATTGTGAGATGACATGC+AGG | - | chr8_3:10149851-10149870 | Msa1275880:CDS | 40.0% | |
| AATTGTGAGATGACATGCAG+GGG | - | chr8_3:10149853-10149872 | Msa1275880:CDS | 40.0% | |
| TTATAAAAAGCAAGGGGCCA+GGG | + | chr8_3:10150021-10150040 | None:intergenic | 40.0% | |
| ATTATAAAAAGCAAGGGGCC+AGG | + | chr8_3:10150022-10150041 | None:intergenic | 40.0% | |
| TATTGCCATGTCTGATGCAA+GGG | + | chr8_3:10150132-10150151 | None:intergenic | 40.0% | |
| TACATCACTGTAAACTGGTG+TGG | + | chr8_3:10150161-10150180 | None:intergenic | 40.0% | |
| TAGTTAGAGCTCATAAGGTG+GGG | + | chr8_3:10150311-10150330 | None:intergenic | 40.0% | |
| TATAGAGGTTACTGATGCTG+GGG | + | chr8_3:10150343-10150362 | None:intergenic | 40.0% | |
| AGGAAGTGGAAAAGGAAAAG+TGG | - | chr8_3:10150568-10150587 | Msa1275880:intron | 40.0% | |
| GGAAGTGGAAAAGGAAAAGT+GGG | - | chr8_3:10150569-10150588 | Msa1275880:intron | 40.0% | |
| AGTGGGAAAGCAAACATTCT+TGG | - | chr8_3:10150586-10150605 | Msa1275880:intron | 40.0% | |
| GGAAAGCAAACATTCTTGGA+AGG | - | chr8_3:10150590-10150609 | Msa1275880:intron | 40.0% | |
| TTTGTCTCCCAATGTTGGTA+TGG | + | chr8_3:10150627-10150646 | None:intergenic | 40.0% | |
| CTTCAAGTGTCAAACTCACA+AGG | + | chr8_3:10150742-10150761 | None:intergenic | 40.0% | |
| CTTGAAGATGTTCCAAACCA+TGG | - | chr8_3:10150755-10150774 | Msa1275880:intron | 40.0% | |
| AAACAAAGTGGATGGATCCA+TGG | + | chr8_3:10150775-10150794 | None:intergenic | 40.0% | |
| TGAGTTGCAAACAAAGTGGA+TGG | + | chr8_3:10150783-10150802 | None:intergenic | 40.0% | |
| ! | TCCACTTTGTTTGCAACTCA+TGG | - | chr8_3:10150783-10150802 | Msa1275880:intron | 40.0% |
| ! | CCACTTTGTTTGCAACTCAT+GGG | - | chr8_3:10150784-10150803 | Msa1275880:intron | 40.0% |
| CCTTGTTAGCGAAAAAGATG+CGG | + | chr8_3:10150838-10150857 | None:intergenic | 40.0% | |
| TCTTCTCTGTAGTACACCAA+TGG | + | chr8_3:10150972-10150991 | None:intergenic | 40.0% | |
| ! | CTGAAGACTTTAAGAGGAGA+TGG | - | chr8_3:10150996-10151015 | Msa1275880:intron | 40.0% |
| ! | AAAAGGAGAGCGTAAGGAAT+GGG | - | chr8_3:10151019-10151038 | Msa1275880:intron | 40.0% |
| GGCAGAAAACCAGCTAAAAA+AGG | - | chr8_3:10151161-10151180 | Msa1275880:intron | 40.0% | |
| TAGCCCAATACCATTGTTCA+CGG | - | chr8_3:10151570-10151589 | Msa1275880:intron | 40.0% | |
| GTTCCGTGAACAATGGTATT+GGG | + | chr8_3:10151576-10151595 | None:intergenic | 40.0% | |
| AGTTCCGTGAACAATGGTAT+TGG | + | chr8_3:10151577-10151596 | None:intergenic | 40.0% | |
| CGAAAAAGTTCCGTGAACAA+TGG | + | chr8_3:10151583-10151602 | None:intergenic | 40.0% | |
| !!! | ACGGAACTTTTTCGATCTGA+TGG | - | chr8_3:10151589-10151608 | Msa1275880:intron | 40.0% |
| ATACCTTGAACCACTTTAGG+TGG | + | chr8_3:10151637-10151656 | None:intergenic | 40.0% | |
| AAGGAAGCGGTGAACAAAGA+TGG | - | chr8_3:10149473-10149492 | Msa1275880:CDS | 45.0% | |
| !! | TGCTTTTGCCTTTTAGGTCC+TGG | - | chr8_3:10149661-10149680 | Msa1275880:intron | 45.0% |
| TATAAAAAGCAAGGGGCCAG+GGG | + | chr8_3:10150020-10150039 | None:intergenic | 45.0% | |
| GTATTGCCATGTCTGATGCA+AGG | + | chr8_3:10150133-10150152 | None:intergenic | 45.0% | |
| ATCACTGTAAACTGGTGTGG+TGG | + | chr8_3:10150158-10150177 | None:intergenic | 45.0% | |
| CTTCAAATATTTGGCACCCC+CGG | - | chr8_3:10150209-10150228 | Msa1275880:intron | 45.0% | |
| TATCTCCACCATGTCATCAG+TGG | + | chr8_3:10150254-10150273 | None:intergenic | 45.0% | |
| AGTTAGAGCTCATAAGGTGG+GGG | + | chr8_3:10150310-10150329 | None:intergenic | 45.0% | |
| ATAGAGGTTACTGATGCTGG+GGG | + | chr8_3:10150342-10150361 | None:intergenic | 45.0% | |
| ! | TTTTGAATGGGGCAGTGACA+TGG | - | chr8_3:10150667-10150686 | Msa1275880:intron | 45.0% |
| TTTGAATGGGGCAGTGACAT+GGG | - | chr8_3:10150668-10150687 | Msa1275880:intron | 45.0% | |
| AAGTGGATGGATCCATGGTT+TGG | + | chr8_3:10150770-10150789 | None:intergenic | 45.0% | |
| CCCATGAGTTGCAAACAAAG+TGG | + | chr8_3:10150787-10150806 | None:intergenic | 45.0% | |
| !! | CCGCATCTTTTTCGCTAACA+AGG | - | chr8_3:10150835-10150854 | Msa1275880:intron | 45.0% |
| CTACCTTCCAAGTGAAACAC+CGG | - | chr8_3:10150944-10150963 | Msa1275880:intron | 45.0% | |
| ! | AGATGGAAAAGGAGAGCGTA+AGG | - | chr8_3:10151013-10151032 | Msa1275880:intron | 45.0% |
| ! | GAAAAGGAGAGCGTAAGGAA+TGG | - | chr8_3:10151018-10151037 | Msa1275880:intron | 45.0% |
| CAGATCCTAAGAGTGAGAGT+CGG | - | chr8_3:10151344-10151363 | Msa1275880:intron | 45.0% | |
| TCACCACCTAAAGTGGTTCA+AGG | - | chr8_3:10151631-10151650 | Msa1275880:intron | 45.0% | |
| AAGGAAGCGGTGAACAAAGA+TGG | - | chr8_3:10149473-10149492 | Msa1275880:CDS | 45.0% | |
| !! | TGCTTTTGCCTTTTAGGTCC+TGG | - | chr8_3:10149661-10149680 | Msa1275880:intron | 45.0% |
| TATAAAAAGCAAGGGGCCAG+GGG | + | chr8_3:10150020-10150039 | None:intergenic | 45.0% | |
| GTATTGCCATGTCTGATGCA+AGG | + | chr8_3:10150133-10150152 | None:intergenic | 45.0% | |
| ATCACTGTAAACTGGTGTGG+TGG | + | chr8_3:10150158-10150177 | None:intergenic | 45.0% | |
| CTTCAAATATTTGGCACCCC+CGG | - | chr8_3:10150209-10150228 | Msa1275880:intron | 45.0% | |
| TATCTCCACCATGTCATCAG+TGG | + | chr8_3:10150254-10150273 | None:intergenic | 45.0% | |
| AGTTAGAGCTCATAAGGTGG+GGG | + | chr8_3:10150310-10150329 | None:intergenic | 45.0% | |
| ATAGAGGTTACTGATGCTGG+GGG | + | chr8_3:10150342-10150361 | None:intergenic | 45.0% | |
| ! | TTTTGAATGGGGCAGTGACA+TGG | - | chr8_3:10150667-10150686 | Msa1275880:intron | 45.0% |
| TTTGAATGGGGCAGTGACAT+GGG | - | chr8_3:10150668-10150687 | Msa1275880:intron | 45.0% | |
| AAGTGGATGGATCCATGGTT+TGG | + | chr8_3:10150770-10150789 | None:intergenic | 45.0% | |
| CCCATGAGTTGCAAACAAAG+TGG | + | chr8_3:10150787-10150806 | None:intergenic | 45.0% | |
| !! | CCGCATCTTTTTCGCTAACA+AGG | - | chr8_3:10150835-10150854 | Msa1275880:intron | 45.0% |
| CTACCTTCCAAGTGAAACAC+CGG | - | chr8_3:10150944-10150963 | Msa1275880:intron | 45.0% | |
| ! | AGATGGAAAAGGAGAGCGTA+AGG | - | chr8_3:10151013-10151032 | Msa1275880:intron | 45.0% |
| ! | GAAAAGGAGAGCGTAAGGAA+TGG | - | chr8_3:10151018-10151037 | Msa1275880:intron | 45.0% |
| CAGATCCTAAGAGTGAGAGT+CGG | - | chr8_3:10151344-10151363 | Msa1275880:intron | 45.0% | |
| TCACCACCTAAAGTGGTTCA+AGG | - | chr8_3:10151631-10151650 | Msa1275880:intron | 45.0% | |
| !! | TATTAAAATAAGAAAAAAAT+TGG | + | chr8_3:10150061-10150080 | None:intergenic | 5.0% |
| !!! | TCTTATTTTAATAAAAAAAA+AGG | - | chr8_3:10150068-10150087 | Msa1275880:intron | 5.0% |
| !! | TATTAAAATAAGAAAAAAAT+TGG | + | chr8_3:10150061-10150080 | None:intergenic | 5.0% |
| !!! | TCTTATTTTAATAAAAAAAA+AGG | - | chr8_3:10150068-10150087 | Msa1275880:intron | 5.0% |
| !! | TTGCCTTTTAGGTCCTGGCA+AGG | - | chr8_3:10149666-10149685 | Msa1275880:intron | 50.0% |
| !! | TGCCTTTTAGGTCCTGGCAA+GGG | - | chr8_3:10149667-10149686 | Msa1275880:intron | 50.0% |
| !! | CTAAAGCATTGTCGTCGCAG+CGG | - | chr8_3:10149954-10149973 | Msa1275880:intron | 50.0% |
| ACGCGACCTTTAAGTCACTG+GGG | + | chr8_3:10149990-10150009 | None:intergenic | 50.0% | |
| CACGCGACCTTTAAGTCACT+GGG | + | chr8_3:10149991-10150010 | None:intergenic | 50.0% | |
| ACACGCGACCTTTAAGTCAC+TGG | + | chr8_3:10149992-10150011 | None:intergenic | 50.0% | |
| !! | ATGCTGGTTCGAATCCTACC+AGG | + | chr8_3:10150095-10150114 | None:intergenic | 50.0% |
| ATGCAAGGGTCTGATGCAAG+GGG | + | chr8_3:10150118-10150137 | None:intergenic | 50.0% | |
| GATGCAAGGGTCTGATGCAA+GGG | + | chr8_3:10150119-10150138 | None:intergenic | 50.0% | |
| TGATGCAAGGGTCTGATGCA+AGG | + | chr8_3:10150120-10150139 | None:intergenic | 50.0% | |
| TCAGACCCTTGCATCAGACA+TGG | - | chr8_3:10150124-10150143 | Msa1275880:intron | 50.0% | |
| AAGATCCGCCACTGATGACA+TGG | - | chr8_3:10150243-10150262 | Msa1275880:intron | 50.0% | |
| TAGAGGTTACTGATGCTGGG+GGG | + | chr8_3:10150341-10150360 | None:intergenic | 50.0% | |
| GTCTCCCAATGTTGGTATGG+AGG | + | chr8_3:10150624-10150643 | None:intergenic | 50.0% | |
| CGGTGTTTCACTTGGAAGGT+AGG | + | chr8_3:10150946-10150965 | None:intergenic | 50.0% | |
| AATGGAGCCGGTGTTTCACT+TGG | + | chr8_3:10150954-10150973 | None:intergenic | 50.0% | |
| !! | AAGTGAAACACCGGCTCCAT+TGG | - | chr8_3:10150953-10150972 | Msa1275880:intron | 50.0% |
| CTGTAGTACACCAATGGAGC+CGG | + | chr8_3:10150966-10150985 | None:intergenic | 50.0% | |
| ! | GAGAGCGTAAGGAATGGGAT+AGG | - | chr8_3:10151024-10151043 | Msa1275880:intron | 50.0% |
| ! | GCCTGACTCGAAACCTCAAT+TGG | - | chr8_3:10151082-10151101 | Msa1275880:intron | 50.0% |
| ! | GCCAATTGAGGTTTCGAGTC+AGG | + | chr8_3:10151086-10151105 | None:intergenic | 50.0% |
| AGAACTGGACGAGCCAATTG+AGG | + | chr8_3:10151098-10151117 | None:intergenic | 50.0% | |
| !! | CAATTGGCTCGTCCAGTTCT+TGG | - | chr8_3:10151098-10151117 | Msa1275880:intron | 50.0% |
| !! | TTGCCTTTTAGGTCCTGGCA+AGG | - | chr8_3:10149666-10149685 | Msa1275880:intron | 50.0% |
| !! | TGCCTTTTAGGTCCTGGCAA+GGG | - | chr8_3:10149667-10149686 | Msa1275880:intron | 50.0% |
| !! | CTAAAGCATTGTCGTCGCAG+CGG | - | chr8_3:10149954-10149973 | Msa1275880:intron | 50.0% |
| ACGCGACCTTTAAGTCACTG+GGG | + | chr8_3:10149990-10150009 | None:intergenic | 50.0% | |
| CACGCGACCTTTAAGTCACT+GGG | + | chr8_3:10149991-10150010 | None:intergenic | 50.0% | |
| ACACGCGACCTTTAAGTCAC+TGG | + | chr8_3:10149992-10150011 | None:intergenic | 50.0% | |
| !! | ATGCTGGTTCGAATCCTACC+AGG | + | chr8_3:10150095-10150114 | None:intergenic | 50.0% |
| ATGCAAGGGTCTGATGCAAG+GGG | + | chr8_3:10150118-10150137 | None:intergenic | 50.0% | |
| GATGCAAGGGTCTGATGCAA+GGG | + | chr8_3:10150119-10150138 | None:intergenic | 50.0% | |
| TGATGCAAGGGTCTGATGCA+AGG | + | chr8_3:10150120-10150139 | None:intergenic | 50.0% | |
| TCAGACCCTTGCATCAGACA+TGG | - | chr8_3:10150124-10150143 | Msa1275880:intron | 50.0% | |
| AAGATCCGCCACTGATGACA+TGG | - | chr8_3:10150243-10150262 | Msa1275880:intron | 50.0% | |
| TAGAGGTTACTGATGCTGGG+GGG | + | chr8_3:10150341-10150360 | None:intergenic | 50.0% | |
| GTCTCCCAATGTTGGTATGG+AGG | + | chr8_3:10150624-10150643 | None:intergenic | 50.0% | |
| CGGTGTTTCACTTGGAAGGT+AGG | + | chr8_3:10150946-10150965 | None:intergenic | 50.0% | |
| AATGGAGCCGGTGTTTCACT+TGG | + | chr8_3:10150954-10150973 | None:intergenic | 50.0% | |
| !! | AAGTGAAACACCGGCTCCAT+TGG | - | chr8_3:10150953-10150972 | Msa1275880:intron | 50.0% |
| CTGTAGTACACCAATGGAGC+CGG | + | chr8_3:10150966-10150985 | None:intergenic | 50.0% | |
| ! | GAGAGCGTAAGGAATGGGAT+AGG | - | chr8_3:10151024-10151043 | Msa1275880:intron | 50.0% |
| ! | GCCTGACTCGAAACCTCAAT+TGG | - | chr8_3:10151082-10151101 | Msa1275880:intron | 50.0% |
| ! | GCCAATTGAGGTTTCGAGTC+AGG | + | chr8_3:10151086-10151105 | None:intergenic | 50.0% |
| AGAACTGGACGAGCCAATTG+AGG | + | chr8_3:10151098-10151117 | None:intergenic | 50.0% | |
| !! | CAATTGGCTCGTCCAGTTCT+TGG | - | chr8_3:10151098-10151117 | Msa1275880:intron | 50.0% |
| AGCCCTTGCCAGGACCTAAA+AGG | + | chr8_3:10149672-10149691 | None:intergenic | 55.0% | |
| GAGAGGTTTAAGCCCTTGCC+AGG | + | chr8_3:10149682-10149701 | None:intergenic | 55.0% | |
| TGTGAGATGACATGCAGGGG+CGG | - | chr8_3:10149856-10149875 | Msa1275880:CDS | 55.0% | |
| ! | ATAAAAGCTGGGGGGTGCAG+TGG | + | chr8_3:10149905-10149924 | None:intergenic | 55.0% |
| TTGTCGTCGCAGCGGTTATG+CGG | - | chr8_3:10149962-10149981 | Msa1275880:intron | 55.0% | |
| CGCGACCTTTAAGTCACTGG+GGG | + | chr8_3:10149989-10150008 | None:intergenic | 55.0% | |
| ATCCGCCACTGATGACATGG+TGG | - | chr8_3:10150246-10150265 | Msa1275880:intron | 55.0% | |
| CTCCACCATGTCATCAGTGG+CGG | + | chr8_3:10150251-10150270 | None:intergenic | 55.0% | |
| AGAGGTTACTGATGCTGGGG+GGG | + | chr8_3:10150340-10150359 | None:intergenic | 55.0% | |
| GGCAGTGACATGGGAATTCC+AGG | - | chr8_3:10150677-10150696 | Msa1275880:intron | 55.0% | |
| GAGCCGGTGTTTCACTTGGA+AGG | + | chr8_3:10150950-10150969 | None:intergenic | 55.0% | |
| ! | TTGGCTCGTCCAGTTCTTGG+AGG | - | chr8_3:10151101-10151120 | Msa1275880:intron | 55.0% |
| GTGCTCGATCCTCCAAGAAC+TGG | + | chr8_3:10151113-10151132 | None:intergenic | 55.0% | |
| CACCTTGCCTTACCCTCGAA+GGG | - | chr8_3:10151130-10151149 | Msa1275880:intron | 55.0% | |
| ACCTTGCCTTACCCTCGAAG+GGG | - | chr8_3:10151131-10151150 | Msa1275880:intron | 55.0% | |
| CTGCTCCGACTCTCACTCTT+AGG | + | chr8_3:10151352-10151371 | None:intergenic | 55.0% | |
| ! | GATGTGCGGTCGCTTTACGA+TGG | - | chr8_3:10151511-10151530 | Msa1275880:intron | 55.0% |
| AGCCCTTGCCAGGACCTAAA+AGG | + | chr8_3:10149672-10149691 | None:intergenic | 55.0% | |
| GAGAGGTTTAAGCCCTTGCC+AGG | + | chr8_3:10149682-10149701 | None:intergenic | 55.0% | |
| TGTGAGATGACATGCAGGGG+CGG | - | chr8_3:10149856-10149875 | Msa1275880:CDS | 55.0% | |
| ! | ATAAAAGCTGGGGGGTGCAG+TGG | + | chr8_3:10149905-10149924 | None:intergenic | 55.0% |
| TTGTCGTCGCAGCGGTTATG+CGG | - | chr8_3:10149962-10149981 | Msa1275880:intron | 55.0% | |
| CGCGACCTTTAAGTCACTGG+GGG | + | chr8_3:10149989-10150008 | None:intergenic | 55.0% | |
| ATCCGCCACTGATGACATGG+TGG | - | chr8_3:10150246-10150265 | Msa1275880:intron | 55.0% | |
| CTCCACCATGTCATCAGTGG+CGG | + | chr8_3:10150251-10150270 | None:intergenic | 55.0% | |
| AGAGGTTACTGATGCTGGGG+GGG | + | chr8_3:10150340-10150359 | None:intergenic | 55.0% | |
| GGCAGTGACATGGGAATTCC+AGG | - | chr8_3:10150677-10150696 | Msa1275880:intron | 55.0% | |
| GAGCCGGTGTTTCACTTGGA+AGG | + | chr8_3:10150950-10150969 | None:intergenic | 55.0% | |
| ! | TTGGCTCGTCCAGTTCTTGG+AGG | - | chr8_3:10151101-10151120 | Msa1275880:intron | 55.0% |
| GTGCTCGATCCTCCAAGAAC+TGG | + | chr8_3:10151113-10151132 | None:intergenic | 55.0% | |
| CACCTTGCCTTACCCTCGAA+GGG | - | chr8_3:10151130-10151149 | Msa1275880:intron | 55.0% | |
| ACCTTGCCTTACCCTCGAAG+GGG | - | chr8_3:10151131-10151150 | Msa1275880:intron | 55.0% | |
| CTGCTCCGACTCTCACTCTT+AGG | + | chr8_3:10151352-10151371 | None:intergenic | 55.0% | |
| ! | GATGTGCGGTCGCTTTACGA+TGG | - | chr8_3:10151511-10151530 | Msa1275880:intron | 55.0% |
| GGATCTCTTCAGAGACCCCC+AGG | - | chr8_3:10149877-10149896 | Msa1275880:CDS | 60.0% | |
| GCGGTCCCCCAGTGACTTAA+AGG | - | chr8_3:10149981-10150000 | Msa1275880:intron | 60.0% | |
| GGTCTGATGCAAGGGGATGC+TGG | + | chr8_3:10150111-10150130 | None:intergenic | 60.0% | |
| AGGTTACTGATGCTGGGGGG+GGG | + | chr8_3:10150338-10150357 | None:intergenic | 60.0% | |
| GAGGTTACTGATGCTGGGGG+GGG | + | chr8_3:10150339-10150358 | None:intergenic | 60.0% | |
| GCACCTTGCCTTACCCTCGA+AGG | - | chr8_3:10151129-10151148 | Msa1275880:intron | 60.0% | |
| CCTTGCCTTACCCTCGAAGG+GGG | - | chr8_3:10151132-10151151 | Msa1275880:intron | 60.0% | |
| GTTCTCCCCCTTCGAGGGTA+AGG | + | chr8_3:10151140-10151159 | None:intergenic | 60.0% | |
| TACCCTCGAAGGGGGAGAAC+AGG | - | chr8_3:10151140-10151159 | Msa1275880:intron | 60.0% | |
| TGCCTGTTCTCCCCCTTCGA+GGG | + | chr8_3:10151145-10151164 | None:intergenic | 60.0% | |
| ! | GTGCGGTCGCTTTACGATGG+TGG | - | chr8_3:10151514-10151533 | Msa1275880:intron | 60.0% |
| GGATCTCTTCAGAGACCCCC+AGG | - | chr8_3:10149877-10149896 | Msa1275880:CDS | 60.0% | |
| GCGGTCCCCCAGTGACTTAA+AGG | - | chr8_3:10149981-10150000 | Msa1275880:intron | 60.0% | |
| GGTCTGATGCAAGGGGATGC+TGG | + | chr8_3:10150111-10150130 | None:intergenic | 60.0% | |
| AGGTTACTGATGCTGGGGGG+GGG | + | chr8_3:10150338-10150357 | None:intergenic | 60.0% | |
| GAGGTTACTGATGCTGGGGG+GGG | + | chr8_3:10150339-10150358 | None:intergenic | 60.0% | |
| GCACCTTGCCTTACCCTCGA+AGG | - | chr8_3:10151129-10151148 | Msa1275880:intron | 60.0% | |
| CCTTGCCTTACCCTCGAAGG+GGG | - | chr8_3:10151132-10151151 | Msa1275880:intron | 60.0% | |
| GTTCTCCCCCTTCGAGGGTA+AGG | + | chr8_3:10151140-10151159 | None:intergenic | 60.0% | |
| TACCCTCGAAGGGGGAGAAC+AGG | - | chr8_3:10151140-10151159 | Msa1275880:intron | 60.0% | |
| TGCCTGTTCTCCCCCTTCGA+GGG | + | chr8_3:10151145-10151164 | None:intergenic | 60.0% | |
| ! | GTGCGGTCGCTTTACGATGG+TGG | - | chr8_3:10151514-10151533 | Msa1275880:intron | 60.0% |
| AGGTCGCGTGTTCGATCCCC+TGG | - | chr8_3:10150001-10150020 | Msa1275880:intron | 65.0% | |
| CCCCCTTCGAGGGTAAGGCA+AGG | + | chr8_3:10151135-10151154 | None:intergenic | 65.0% | |
| CTGCCTGTTCTCCCCCTTCG+AGG | + | chr8_3:10151146-10151165 | None:intergenic | 65.0% | |
| AGGTCGCGTGTTCGATCCCC+TGG | - | chr8_3:10150001-10150020 | Msa1275880:intron | 65.0% | |
| CCCCCTTCGAGGGTAAGGCA+AGG | + | chr8_3:10151135-10151154 | None:intergenic | 65.0% | |
| CTGCCTGTTCTCCCCCTTCG+AGG | + | chr8_3:10151146-10151165 | None:intergenic | 65.0% | |
| ! | TGGGGGGTGCAGTGGCACCT+GGG | + | chr8_3:10149897-10149916 | None:intergenic | 70.0% |
| ! | TGGGGGGTGCAGTGGCACCT+GGG | + | chr8_3:10149897-10149916 | None:intergenic | 70.0% |
| ! | GGGGGTGCAGTGGCACCTGG+GGG | + | chr8_3:10149895-10149914 | None:intergenic | 75.0% |
| ! | GGGGGGTGCAGTGGCACCTG+GGG | + | chr8_3:10149896-10149915 | None:intergenic | 75.0% |
| ! | CTGGGGGGTGCAGTGGCACC+TGG | + | chr8_3:10149898-10149917 | None:intergenic | 75.0% |
| ! | GGGGGTGCAGTGGCACCTGG+GGG | + | chr8_3:10149895-10149914 | None:intergenic | 75.0% |
| ! | GGGGGGTGCAGTGGCACCTG+GGG | + | chr8_3:10149896-10149915 | None:intergenic | 75.0% |
| ! | CTGGGGGGTGCAGTGGCACC+TGG | + | chr8_3:10149898-10149917 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 10149232 | 10151660 | 10149232 | ID=Msa1275880;Name=Msa1275880 |
| chr8_3 | mRNA | 10149232 | 10151660 | 10149232 | ID=Msa1275880-mRNA-1;Parent=Msa1275880;Name=Msa1275880-mRNA-1;_AED=0.49;_eAED=0.49;_QI=0|0.25|0.2|0.6|1|1|5|0|202 |
| chr8_3 | exon | 10151655 | 10151660 | 10151655 | ID=Msa1275880-mRNA-1:exon:4236;Parent=Msa1275880-mRNA-1 |
| chr8_3 | exon | 10151411 | 10151416 | 10151411 | ID=Msa1275880-mRNA-1:exon:4235;Parent=Msa1275880-mRNA-1 |
| chr8_3 | exon | 10150281 | 10150322 | 10150281 | ID=Msa1275880-mRNA-1:exon:4234;Parent=Msa1275880-mRNA-1 |
| chr8_3 | exon | 10149710 | 10149950 | 10149710 | ID=Msa1275880-mRNA-1:exon:4233;Parent=Msa1275880-mRNA-1 |
| chr8_3 | exon | 10149232 | 10149545 | 10149232 | ID=Msa1275880-mRNA-1:exon:4232;Parent=Msa1275880-mRNA-1 |
| chr8_3 | CDS | 10151655 | 10151660 | 10151655 | ID=Msa1275880-mRNA-1:cds;Parent=Msa1275880-mRNA-1 |
| chr8_3 | CDS | 10151411 | 10151416 | 10151411 | ID=Msa1275880-mRNA-1:cds;Parent=Msa1275880-mRNA-1 |
| chr8_3 | CDS | 10150281 | 10150322 | 10150281 | ID=Msa1275880-mRNA-1:cds;Parent=Msa1275880-mRNA-1 |
| chr8_3 | CDS | 10149710 | 10149950 | 10149710 | ID=Msa1275880-mRNA-1:cds;Parent=Msa1275880-mRNA-1 |
| chr8_3 | CDS | 10149232 | 10149545 | 10149232 | ID=Msa1275880-mRNA-1:cds;Parent=Msa1275880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
